Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 907 |
| AccI | GTMKAC | 1 cut(s) | 123 |
| AccII | CGCG | 3 cut(s) | 25, 1436, 1546 |
| AciI | CCGC | 3 cut(s) | 320, 658, 1052 |
| AclWI | GGATC | 3 cut(s) | 198, 782, 1207 |
| AcsI | RAATTY | 5 cut(s) | 563, 725, 844, 1370, 1609 |
| AcuI | CTGAAG | 1 cut(s) | 1184 |
| AfaI | GTAC | 6 cut(s) | 343, 465, 604, 875, 943, 1197 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1106, 1248 |
| AflIII | ACRYGT | 1 cut(s) | 1434 |
| AgsI | TTSAA | 9 cut(s) | 148, 214, 431, 533, 569, 995, 1143, 1343, 1485 |
| AjnI | CCWGG | 1 cut(s) | 702 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 789, 821 |
| AleI | CACNNNNGTG | 1 cut(s) | 139 |
| AluBI | AGCT | 5 cut(s) | 129, 956, 1061, 1481, 1604 |
| AluI | AGCT | 5 cut(s) | 129, 956, 1061, 1481, 1604 |
| Alw21I | GWGCWC | 1 cut(s) | 549 |
| Alw26I | GTCTC | 1 cut(s) | 672 |
| AlwI | GGATC | 3 cut(s) | 198, 782, 1207 |
| Ama87I | CYCGRG | 1 cut(s) | 1135 |
| AoxI | GGCC | 2 cut(s) | 352, 1254 |
| ApeKI | GCWGC | 3 cut(s) | 488, 1013, 1049 |
| ApoI | RAATTY | 5 cut(s) | 563, 725, 844, 1370, 1609 |
| AseI | ATTAAT | 1 cut(s) | 53 |
| AspLEI | GCGC | 5 cut(s) | 25, 239, 368, 908, 1546 |
| AspS9I | GGNCC | 4 cut(s) | 352, 510, 1080, 1132 |
| AsuC2I | CCSGG | 1 cut(s) | 234 |
| AsuHPI | GGTGA | 4 cut(s) | 298, 619, 1066, 1230 |
| AsuII | TTCGAA | 1 cut(s) | 561 |
| AvaI | CYCGRG | 1 cut(s) | 1135 |
| AvaII | GGWCC | 3 cut(s) | 510, 1080, 1132 |
| BbsI | GAAGAC | 1 cut(s) | 202 |
| Bbv12I | GWGCWC | 1 cut(s) | 549 |
| BbvI | GCAGC | 3 cut(s) | 475, 1025, 1061 |
| BccI | CCATC | 2 cut(s) | 290, 865 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 84, 118 |
| BciT130I | CCWGG | 1 cut(s) | 704 |
| BcnI | CCSGG | 1 cut(s) | 234 |
| BcoDI | GTCTC | 1 cut(s) | 672 |
| BfaI | CTAG | 2 cut(s) | 423, 957 |
| BfmI | CTRYAG | 2 cut(s) | 124, 1047 |
| BfoI | RGCGCY | 1 cut(s) | 369 |
| BisI | GCNGC | 4 cut(s) | 489, 658, 1014, 1050 |
| BlsI | GCNGC | 4 cut(s) | 490, 659, 1015, 1051 |
| Bme1390I | CCNGG | 2 cut(s) | 234, 704 |
| Bme18I | GGWCC | 3 cut(s) | 510, 1080, 1132 |
| BmeT110I | CYCGRG | 1 cut(s) | 1135 |
| BmgT120I | GGNCC | 4 cut(s) | 352, 510, 1080, 1132 |
| BmiI | GGNNCC | 2 cut(s) | 1082, 1134 |
| BmrFI | CCNGG | 2 cut(s) | 234, 704 |
| BmsI | GCATC | 3 cut(s) | 951, 1100, 1567 |
| BpiI | GAAGAC | 1 cut(s) | 202 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1118 |
| Bpu14I | TTCGAA | 1 cut(s) | 561 |
| BpuMI | CCSGG | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 2 cut(s) | 361, 712 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1106, 1248 |
| Bse1I | ACTGG | 3 cut(s) | 418, 939, 1100 |
| BseBI | CCWGG | 1 cut(s) | 704 |
| BseDI | CCNNGG | 2 cut(s) | 361, 712 |
| BseGI | GGATG | 4 cut(s) | 515, 966, 1115, 1558 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1106, 1248 |
| BseMII | CTCAG | 2 cut(s) | 534, 1458 |
| BseNI | ACTGG | 3 cut(s) | 418, 939, 1100 |
| BseXI | GCAGC | 3 cut(s) | 475, 1025, 1061 |
| Bsh1236I | CGCG | 3 cut(s) | 25, 1436, 1546 |
| BshFI | GGCC | 2 cut(s) | 354, 1256 |
| BsiHKAI | GWGCWC | 1 cut(s) | 549 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1135 |
| BsiSI | CCGG | 1 cut(s) | 234 |
| BslFI | GGGAC | 1 cut(s) | 1118 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1106, 1248 |
| BsmAI | GTCTC | 1 cut(s) | 672 |
| BsmFI | GGGAC | 1 cut(s) | 1118 |
| BsnI | GGCC | 2 cut(s) | 354, 1256 |
| BsoBI | CYCGRG | 1 cut(s) | 1135 |
| Bsp119I | TTCGAA | 1 cut(s) | 561 |
| Bsp1286I | GDGCHC | 1 cut(s) | 549 |
| Bsp1407I | TGTACA | 1 cut(s) | 463 |
| Bsp143I | GATC | 3 cut(s) | 190, 774, 1212 |
| BspACI | CCGC | 3 cut(s) | 320, 658, 1052 |
| BspANI | GGCC | 2 cut(s) | 354, 1256 |
| BspCNI | CTCAG | 2 cut(s) | 535, 1459 |
| BspFNI | CGCG | 3 cut(s) | 25, 1436, 1546 |
| BspLI | GGNNCC | 2 cut(s) | 1082, 1134 |
| BspMAI | CTGCAG | 1 cut(s) | 1051 |
| BspPI | GGATC | 3 cut(s) | 198, 782, 1207 |
| BspT104I | TTCGAA | 1 cut(s) | 561 |
| BsrGI | TGTACA | 1 cut(s) | 463 |
| BsrI | ACTGG | 3 cut(s) | 418, 939, 1100 |
| BssECI | CCNNGG | 2 cut(s) | 361, 712 |
| BssMI | GATC | 3 cut(s) | 190, 774, 1212 |
| BssT1I | CCWWGG | 2 cut(s) | 361, 712 |
| Bst2UI | CCWGG | 1 cut(s) | 704 |
| Bst4CI | ACNGT | 4 cut(s) | 60, 865, 978, 1034 |
| Bst6I | CTCTTC | 1 cut(s) | 248 |
| BstAUI | TGTACA | 1 cut(s) | 463 |
| BstBI | TTCGAA | 1 cut(s) | 561 |
| BstC8I | GCNNGC | 3 cut(s) | 904, 910, 1115 |
| BstDEI | CTNAG | 4 cut(s) | 543, 686, 1118, 1467 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1246 |
| BstF5I | GGATG | 4 cut(s) | 515, 966, 1115, 1558 |
| BstFNI | CGCG | 3 cut(s) | 25, 1436, 1546 |
| BstH2I | RGCGCY | 1 cut(s) | 369 |
| BstHHI | GCGC | 5 cut(s) | 25, 239, 368, 908, 1546 |
| BstKTI | GATC | 3 cut(s) | 193, 777, 1215 |
| BstMAI | GTCTC | 1 cut(s) | 672 |
| BstMBI | GATC | 3 cut(s) | 190, 774, 1212 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1058, 1123 |
| BstNI | CCWGG | 1 cut(s) | 704 |
| BstNSI | RCATGY | 2 cut(s) | 906, 912 |
| BstSCI | CCNGG | 2 cut(s) | 232, 702 |
| BstSFI | CTRYAG | 2 cut(s) | 124, 1047 |
| BstUI | CGCG | 3 cut(s) | 25, 1436, 1546 |
| BstV1I | GCAGC | 3 cut(s) | 475, 1025, 1061 |
| BstV2I | GAAGAC | 1 cut(s) | 202 |
| BstX2I | RGATCY | 1 cut(s) | 1212 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 362 |
| BstYI | RGATCY | 1 cut(s) | 1212 |
| BsuRI | GGCC | 2 cut(s) | 354, 1256 |
| BtsCI | GGATG | 4 cut(s) | 515, 966, 1115, 1558 |
| BtsI | GCAGTG | 1 cut(s) | 1044 |
| BtsIMutI | CAGTG | 3 cut(s) | 146, 1044, 1107 |
| Cac8I | GCNNGC | 3 cut(s) | 904, 910, 1115 |
| CfoI | GCGC | 5 cut(s) | 25, 239, 368, 908, 1546 |
| Cfr13I | GGNCC | 4 cut(s) | 352, 510, 1080, 1132 |
| CseI | GACGC | 2 cut(s) | 1442, 1535 |
| CsiI | ACCWGGT | 1 cut(s) | 702 |
| Csp6I | GTAC | 6 cut(s) | 342, 464, 603, 874, 942, 1196 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 488, 523, 1278, 1313 |
| CviAII | CATG | 6 cut(s) | 89, 221, 871, 903, 909, 1456 |
| CviQI | GTAC | 6 cut(s) | 342, 464, 603, 874, 942, 1196 |
| DdeI | CTNAG | 4 cut(s) | 543, 686, 1118, 1467 |
| DpnI | GATC | 3 cut(s) | 192, 776, 1214 |
| DpnII | GATC | 3 cut(s) | 190, 774, 1212 |
| Eam1104I | CTCTTC | 1 cut(s) | 248 |
| EarI | CTCTTC | 1 cut(s) | 248 |
| Eco130I | CCWWGG | 2 cut(s) | 361, 712 |
| Eco32I | GATATC | 1 cut(s) | 1303 |
| Eco47I | GGWCC | 3 cut(s) | 510, 1080, 1132 |
| Eco57I | CTGAAG | 1 cut(s) | 1184 |
| Eco88I | CYCGRG | 1 cut(s) | 1135 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1246 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1080, 1132 |
| EcoRII | CCWGG | 1 cut(s) | 702 |
| EcoRV | GATATC | 1 cut(s) | 1303 |
| EcoT14I | CCWWGG | 2 cut(s) | 361, 712 |
| EcoT22I | ATGCAT | 1 cut(s) | 914 |
| ErhI | CCWWGG | 2 cut(s) | 361, 712 |
| FaeI | CATG | 6 cut(s) | 92, 224, 874, 906, 912, 1459 |
| FaqI | GGGAC | 1 cut(s) | 1118 |
| FatI | CATG | 6 cut(s) | 88, 220, 870, 902, 908, 1455 |
| FauI | CCCGC | 1 cut(s) | 313 |
| FblI | GTMKAC | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 4 cut(s) | 489, 658, 1014, 1050 |
| FokI | GGATG | 4 cut(s) | 502, 973, 1122, 1545 |
| Fsp4HI | GCNGC | 4 cut(s) | 489, 658, 1014, 1050 |
| FspAI | RTGCGCAY | 1 cut(s) | 907 |
| FspBI | CTAG | 2 cut(s) | 423, 957 |
| FspI | TGCGCA | 1 cut(s) | 907 |
| GlaI | GCGC | 5 cut(s) | 24, 238, 367, 907, 1545 |
| GluI | GCNGC | 4 cut(s) | 489, 658, 1014, 1050 |
| HaeII | RGCGCY | 1 cut(s) | 369 |
| HaeIII | GGCC | 2 cut(s) | 354, 1256 |
| HapII | CCGG | 1 cut(s) | 234 |
| HgaI | GACGC | 2 cut(s) | 1442, 1535 |
| HhaI | GCGC | 5 cut(s) | 25, 239, 368, 908, 1546 |
| Hin1II | CATG | 6 cut(s) | 92, 224, 874, 906, 912, 1459 |
| Hin6I | GCGC | 5 cut(s) | 23, 237, 366, 906, 1544 |
| HinP1I | GCGC | 5 cut(s) | 23, 237, 366, 906, 1544 |
| HincII | GTYRAC | 3 cut(s) | 709, 922, 1572 |
| HindII | GTYRAC | 3 cut(s) | 709, 922, 1572 |
| HinfI | GANTC | 7 cut(s) | 96, 204, 437, 574, 1152, 1225, 1463 |
| HpaI | GTTAAC | 1 cut(s) | 922 |
| HpaII | CCGG | 1 cut(s) | 234 |
| HphI | GGTGA | 4 cut(s) | 298, 619, 1066, 1230 |
| Hpy166II | GTNNAC | 9 cut(s) | 42, 124, 466, 510, 709, 922, 1499, 1550, 1572 |
| Hpy188I | TCNGA | 4 cut(s) | 1003, 1151, 1188, 1468 |
| Hpy188III | TCNNGA | 3 cut(s) | 201, 641, 1135 |
| Hpy8I | GTNNAC | 9 cut(s) | 42, 124, 466, 510, 709, 922, 1499, 1550, 1572 |
| HpyAV | CCTTC | 2 cut(s) | 905, 1563 |
| HpyCH4III | ACNGT | 4 cut(s) | 60, 865, 978, 1034 |
| HpyCH4IV | ACGT | 2 cut(s) | 44, 1315 |
| HpyCH4V | TGCA | 6 cut(s) | 77, 902, 912, 1013, 1049, 1455 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1058, 1123 |
| HpyF3I | CTNAG | 4 cut(s) | 543, 686, 1118, 1467 |
| HpySE526I | ACGT | 2 cut(s) | 44, 1315 |
| Hsp92II | CATG | 6 cut(s) | 92, 224, 874, 906, 912, 1459 |
| HspAI | GCGC | 5 cut(s) | 23, 237, 366, 906, 1544 |
| KspAI | GTTAAC | 1 cut(s) | 922 |
| Kzo9I | GATC | 3 cut(s) | 190, 774, 1212 |
| LmnI | GCTCC | 1 cut(s) | 1123 |
| Lsp1109I | GCAGC | 3 cut(s) | 475, 1025, 1061 |
| LweI | GCATC | 3 cut(s) | 951, 1100, 1567 |
| MabI | ACCWGGT | 1 cut(s) | 702 |
| MaeI | CTAG | 2 cut(s) | 423, 957 |
| MaeII | ACGT | 2 cut(s) | 44, 1315 |
| MaeIII | GTNAC | 6 cut(s) | 477, 850, 929, 1034, 1437, 1579 |
| MalI | GATC | 3 cut(s) | 192, 776, 1214 |
| MboI | GATC | 3 cut(s) | 190, 774, 1212 |
| MboII | GAAGA | 5 cut(s) | 202, 235, 238, 241, 1220 |
| MfeI | CAATTG | 1 cut(s) | 72 |
| MflI | RGATCY | 1 cut(s) | 1212 |
| MhlI | GDGCHC | 1 cut(s) | 549 |
| MluI | ACGCGT | 1 cut(s) | 1434 |
| MlyI | GAGTC | 3 cut(s) | 105, 583, 1457 |
| MnlI | CCTC | 7 cut(s) | 323, 343, 378, 831, 1071, 1288, 1453 |
| Mph1103I | ATGCAT | 1 cut(s) | 914 |
| MseI | TTAA | 9 cut(s) | 53, 282, 653, 722, 746, 921, 980, 1209, 1518 |
| MslI | CAYNNNNRTG | 3 cut(s) | 139, 888, 907 |
| MspA1I | CMGCKG | 1 cut(s) | 1052 |
| MspI | CCGG | 1 cut(s) | 234 |
| MspR9I | CCNGG | 2 cut(s) | 234, 704 |
| MunI | CAATTG | 1 cut(s) | 72 |
| MvaI | CCWGG | 1 cut(s) | 704 |
| MvnI | CGCG | 3 cut(s) | 25, 1436, 1546 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1058, 1123 |
| NciI | CCSGG | 1 cut(s) | 234 |
| NdeII | GATC | 3 cut(s) | 190, 774, 1212 |
| NlaIII | CATG | 6 cut(s) | 92, 224, 874, 906, 912, 1459 |
| NlaIV | GGNNCC | 2 cut(s) | 1082, 1134 |
| NmuCI | GTSAC | 2 cut(s) | 850, 1579 |
| NsbI | TGCGCA | 1 cut(s) | 907 |
| NsiI | ATGCAT | 1 cut(s) | 914 |
| NspI | RCATGY | 2 cut(s) | 906, 912 |
| NspV | TTCGAA | 1 cut(s) | 561 |
| OliI | CACNNNNGTG | 1 cut(s) | 139 |
| PaeI | GCATGC | 2 cut(s) | 906, 912 |
| PfeI | GAWTC | 4 cut(s) | 204, 437, 1152, 1225 |
| PkrI | GCNGC | 4 cut(s) | 490, 659, 1015, 1051 |
| PleI | GAGTC | 3 cut(s) | 104, 582, 1457 |
| PpsI | GAGTC | 3 cut(s) | 104, 582, 1457 |
| PpuMI | RGGWCCY | 2 cut(s) | 1080, 1132 |
| PshBI | ATTAAT | 1 cut(s) | 53 |
| Psp5II | RGGWCCY | 2 cut(s) | 1080, 1132 |
| Psp6I | CCWGG | 1 cut(s) | 702 |
| PspGI | CCWGG | 1 cut(s) | 702 |
| PspN4I | GGNNCC | 2 cut(s) | 1082, 1134 |
| PspPI | GGNCC | 4 cut(s) | 352, 510, 1080, 1132 |
| PspPPI | RGGWCCY | 2 cut(s) | 1080, 1132 |
| PstI | CTGCAG | 1 cut(s) | 1051 |
| PsuI | RGATCY | 1 cut(s) | 1212 |
| RsaI | GTAC | 6 cut(s) | 343, 465, 604, 875, 943, 1197 |
| RsaNI | GTAC | 6 cut(s) | 342, 464, 603, 874, 942, 1196 |
| RseI | CAYNNNNRTG | 3 cut(s) | 139, 888, 907 |
| SaqAI | TTAA | 9 cut(s) | 53, 282, 653, 722, 746, 921, 980, 1209, 1518 |
| SatI | GCNGC | 4 cut(s) | 489, 658, 1014, 1050 |
| Sau3AI | GATC | 3 cut(s) | 190, 774, 1212 |
| Sau96I | GGNCC | 4 cut(s) | 352, 510, 1080, 1132 |
| SchI | GAGTC | 3 cut(s) | 105, 583, 1457 |
| ScrFI | CCNGG | 2 cut(s) | 234, 704 |
| SduI | GDGCHC | 1 cut(s) | 549 |
| SexAI | ACCWGGT | 1 cut(s) | 702 |
| SfaNI | GCATC | 3 cut(s) | 951, 1100, 1567 |
| SfcI | CTRYAG | 2 cut(s) | 124, 1047 |
| SfuI | TTCGAA | 1 cut(s) | 561 |
| SinI | GGWCC | 3 cut(s) | 510, 1080, 1132 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 139, 888, 907 |
| SphI | GCATGC | 2 cut(s) | 906, 912 |
| SsiI | CCGC | 3 cut(s) | 320, 658, 1052 |
| SspI | AATATT | 1 cut(s) | 1526 |
| SspMI | CTAG | 2 cut(s) | 423, 957 |
| StyD4I | CCNGG | 2 cut(s) | 232, 702 |
| StyI | CCWWGG | 2 cut(s) | 361, 712 |
| TaaI | ACNGT | 4 cut(s) | 60, 865, 978, 1034 |
| TaiI | ACGT | 2 cut(s) | 47, 1318 |
| TaqI | TCGA | 3 cut(s) | 561, 740, 1223 |
| TatI | WGTACW | 3 cut(s) | 463, 941, 1195 |
| TauI | GCSGC | 1 cut(s) | 660 |
| TfiI | GAWTC | 4 cut(s) | 204, 437, 1152, 1225 |
| Tru1I | TTAA | 9 cut(s) | 53, 282, 653, 722, 746, 921, 980, 1209, 1518 |
| Tru9I | TTAA | 9 cut(s) | 53, 282, 653, 722, 746, 921, 980, 1209, 1518 |
| TscAI | CASTG | 3 cut(s) | 146, 1051, 1107 |
| TseFI | GTSAC | 2 cut(s) | 850, 1579 |
| TseI | GCWGC | 3 cut(s) | 488, 1013, 1049 |
| Tsp45I | GTSAC | 2 cut(s) | 850, 1579 |
| TspDTI | ATGAA | 2 cut(s) | 26, 209 |
| TspGWI | ACGGA | 2 cut(s) | 329, 488 |
| TspRI | CASTG | 3 cut(s) | 146, 1051, 1107 |
| VpaK11BI | GGWCC | 3 cut(s) | 510, 1080, 1132 |
| VspI | ATTAAT | 1 cut(s) | 53 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1246 |
| XapI | RAATTY | 5 cut(s) | 563, 725, 844, 1370, 1609 |
| XceI | RCATGY | 2 cut(s) | 906, 912 |
| XmiI | GTMKAC | 1 cut(s) | 123 |
| XspI | CTAG | 2 cut(s) | 423, 957 |
| Zsp2I | ATGCAT | 1 cut(s) | 914 |