Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 121 |
| AclWI | GGATC | 3 cut(s) | 22, 210, 223 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 136 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 88, 120 |
| AleI | CACNNNNGTG | 1 cut(s) | 22 |
| Alw26I | GTCTC | 1 cut(s) | 239 |
| AlwI | GGATC | 3 cut(s) | 22, 210, 223 |
| AoxI | GGCC | 1 cut(s) | 64 |
| AseI | ATTAAT | 1 cut(s) | 206 |
| AspS9I | GGNCC | 3 cut(s) | 51, 256, 263 |
| AsuHPI | GGTGA | 1 cut(s) | 110 |
| AvaII | GGWCC | 3 cut(s) | 51, 256, 263 |
| BamHI | GGATCC | 1 cut(s) | 215 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 204, 236 |
| BccI | CCATC | 1 cut(s) | 138 |
| BceAI | ACGGC | 1 cut(s) | 18 |
| BcoDI | GTCTC | 1 cut(s) | 239 |
| BfaI | CTAG | 2 cut(s) | 11, 276 |
| Bme18I | GGWCC | 3 cut(s) | 51, 256, 263 |
| BmgT120I | GGNCC | 3 cut(s) | 51, 256, 263 |
| BmiI | GGNNCC | 1 cut(s) | 217 |
| BmsI | GCATC | 1 cut(s) | 90 |
| BoxI | GACNNNNGTC | 1 cut(s) | 261 |
| BsaJI | CCNNGG | 2 cut(s) | 252, 259 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 136 |
| BseDI | CCNNGG | 2 cut(s) | 252, 259 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BsgI | GTGCAG | 1 cut(s) | 255 |
| BshFI | GGCC | 1 cut(s) | 66 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 136 |
| BsmAI | GTCTC | 1 cut(s) | 239 |
| BsnI | GGCC | 1 cut(s) | 66 |
| Bsp143I | GATC | 2 cut(s) | 14, 215 |
| Bsp19I | CCATGG | 1 cut(s) | 252 |
| BspACI | CCGC | 1 cut(s) | 121 |
| BspANI | GGCC | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 217 |
| BspPI | GGATC | 3 cut(s) | 22, 210, 223 |
| BssECI | CCNNGG | 2 cut(s) | 252, 259 |
| BssMI | GATC | 2 cut(s) | 14, 215 |
| BssT1I | CCWWGG | 2 cut(s) | 252, 259 |
| BstDSI | CCRYGG | 1 cut(s) | 252 |
| BstKTI | GATC | 2 cut(s) | 17, 218 |
| BstMAI | GTCTC | 1 cut(s) | 239 |
| BstMBI | GATC | 2 cut(s) | 14, 215 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 261 |
| BstX2I | RGATCY | 1 cut(s) | 215 |
| BstYI | RGATCY | 1 cut(s) | 215 |
| BsuRI | GGCC | 1 cut(s) | 66 |
| BtgI | CCRYGG | 1 cut(s) | 252 |
| Cfr13I | GGNCC | 3 cut(s) | 51, 256, 263 |
| CviAII | CATG | 3 cut(s) | 168, 194, 253 |
| CviJI | RGCY | 2 cut(s) | 66, 166 |
| CviKI_1 | RGCY | 2 cut(s) | 66, 166 |
| DpnI | GATC | 2 cut(s) | 16, 217 |
| DpnII | GATC | 2 cut(s) | 14, 215 |
| Eco130I | CCWWGG | 2 cut(s) | 252, 259 |
| Eco47I | GGWCC | 3 cut(s) | 51, 256, 263 |
| EcoT14I | CCWWGG | 2 cut(s) | 252, 259 |
| ErhI | CCWWGG | 2 cut(s) | 252, 259 |
| FaeI | CATG | 3 cut(s) | 171, 197, 256 |
| FaiI | YATR | 4 cut(s) | 63, 169, 195, 254 |
| FatI | CATG | 3 cut(s) | 167, 193, 252 |
| FspBI | CTAG | 2 cut(s) | 11, 276 |
| HaeIII | GGCC | 1 cut(s) | 66 |
| Hin1II | CATG | 3 cut(s) | 171, 197, 256 |
| HphI | GGTGA | 1 cut(s) | 110 |
| Hpy166II | GTNNAC | 1 cut(s) | 266 |
| Hpy8I | GTNNAC | 1 cut(s) | 266 |
| HpyAV | CCTTC | 2 cut(s) | 192, 206 |
| HpyCH4V | TGCA | 3 cut(s) | 171, 237, 272 |
| Hsp92II | CATG | 3 cut(s) | 171, 197, 256 |
| Kzo9I | GATC | 2 cut(s) | 14, 215 |
| LmnI | GCTCC | 1 cut(s) | 143 |
| LpnPI | CCDG | 2 cut(s) | 65, 80 |
| LweI | GCATC | 1 cut(s) | 90 |
| MaeI | CTAG | 2 cut(s) | 11, 276 |
| MaeIII | GTNAC | 1 cut(s) | 75 |
| MalI | GATC | 2 cut(s) | 16, 217 |
| MboI | GATC | 2 cut(s) | 14, 215 |
| MflI | RGATCY | 1 cut(s) | 215 |
| MluCI | AATT | 1 cut(s) | 148 |
| MmeI | TCCRAC | 2 cut(s) | 17, 121 |
| MseI | TTAA | 1 cut(s) | 206 |
| MslI | CAYNNNNRTG | 1 cut(s) | 22 |
| NcoI | CCATGG | 1 cut(s) | 252 |
| NdeII | GATC | 2 cut(s) | 14, 215 |
| NlaIII | CATG | 3 cut(s) | 171, 197, 256 |
| NlaIV | GGNNCC | 1 cut(s) | 217 |
| NmuCI | GTSAC | 1 cut(s) | 75 |
| OliI | CACNNNNGTG | 1 cut(s) | 22 |
| PshAI | GACNNNNGTC | 1 cut(s) | 261 |
| PshBI | ATTAAT | 1 cut(s) | 206 |
| PspN4I | GGNNCC | 1 cut(s) | 217 |
| PspPI | GGNCC | 3 cut(s) | 51, 256, 263 |
| PsuI | RGATCY | 1 cut(s) | 215 |
| RseI | CAYNNNNRTG | 1 cut(s) | 22 |
| SaqAI | TTAA | 1 cut(s) | 206 |
| Sau3AI | GATC | 2 cut(s) | 14, 215 |
| Sau96I | GGNCC | 3 cut(s) | 51, 256, 263 |
| SetI | ASST | 5 cut(s) | 141, 203, 265, 271, 277 |
| SfaNI | GCATC | 1 cut(s) | 90 |
| SinI | GGWCC | 3 cut(s) | 51, 256, 263 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 22 |
| Sse9I | AATT | 1 cut(s) | 148 |
| SsiI | CCGC | 1 cut(s) | 121 |
| SspMI | CTAG | 2 cut(s) | 11, 276 |
| StyI | CCWWGG | 2 cut(s) | 252, 259 |
| TasI | AATT | 1 cut(s) | 148 |
| Tru1I | TTAA | 1 cut(s) | 206 |
| Tru9I | TTAA | 1 cut(s) | 206 |
| TseFI | GTSAC | 1 cut(s) | 75 |
| Tsp45I | GTSAC | 1 cut(s) | 75 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 256, 263 |
| VspI | ATTAAT | 1 cut(s) | 206 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 137 |
| XspI | CTAG | 2 cut(s) | 11, 276 |