Protein ALTERED XYLOGLUCAN
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TTC5_OB | PF16669 | 298 - 410 | 5.1e-37 | Tetratricopeptide repeat protein 5 OB fold domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1105 |
| AccB1I | GGYRCC | 1 cut(s) | 449 |
| AciI | CCGC | 3 cut(s) | 278, 302, 1225 |
| AclWI | GGATC | 6 cut(s) | 270, 746, 759, 1010, 1094, 1107 |
| AcoI | YGGCCR | 1 cut(s) | 357 |
| AcsI | RAATTY | 4 cut(s) | 529, 880, 886, 1121 |
| AcuI | CTGAAG | 1 cut(s) | 792 |
| AfaI | GTAC | 4 cut(s) | 203, 539, 671, 1001 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 174, 585, 1110 |
| AgsI | TTSAA | 7 cut(s) | 289, 734, 782, 886, 1058, 1153, 1174 |
| AjnI | CCWGG | 2 cut(s) | 584, 754 |
| AluBI | AGCT | 6 cut(s) | 59, 181, 503, 737, 808, 905 |
| AluI | AGCT | 6 cut(s) | 59, 181, 503, 737, 808, 905 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw26I | GTCTC | 3 cut(s) | 615, 764, 1074 |
| AlwI | GGATC | 6 cut(s) | 270, 746, 759, 1010, 1094, 1107 |
| Ama87I | CYCGRG | 2 cut(s) | 72, 167 |
| AoxI | GGCC | 3 cut(s) | 357, 441, 717 |
| ApeKI | GCWGC | 3 cut(s) | 190, 737, 740 |
| ApoI | RAATTY | 4 cut(s) | 529, 880, 886, 1121 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 777 |
| AspS9I | GGNCC | 4 cut(s) | 392, 442, 589, 718 |
| AsuHPI | GGTGA | 1 cut(s) | 1205 |
| AvaI | CYCGRG | 2 cut(s) | 72, 167 |
| AvaII | GGWCC | 2 cut(s) | 392, 589 |
| BamHI | GGATCC | 2 cut(s) | 751, 1099 |
| BanI | GGYRCC | 1 cut(s) | 449 |
| BbsI | GAAGAC | 1 cut(s) | 345 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvCI | CCTCAGC | 1 cut(s) | 258 |
| BbvI | GCAGC | 3 cut(s) | 202, 724, 727 |
| BccI | CCATC | 2 cut(s) | 301, 518 |
| BciT130I | CCWGG | 2 cut(s) | 586, 756 |
| BcoDI | GTCTC | 3 cut(s) | 615, 764, 1074 |
| BfaI | CTAG | 2 cut(s) | 701, 809 |
| BfmI | CTRYAG | 1 cut(s) | 605 |
| BfuAI | ACCTGC | 1 cut(s) | 1105 |
| BglII | AGATCT | 2 cut(s) | 346, 836 |
| BisI | GCNGC | 3 cut(s) | 191, 738, 741 |
| BlsI | GCNGC | 3 cut(s) | 192, 739, 742 |
| Bme1390I | CCNGG | 2 cut(s) | 586, 756 |
| Bme18I | GGWCC | 2 cut(s) | 392, 589 |
| BmeT110I | CYCGRG | 2 cut(s) | 72, 167 |
| BmgT120I | GGNCC | 4 cut(s) | 392, 442, 589, 718 |
| BmiI | GGNNCC | 5 cut(s) | 451, 583, 590, 753, 1101 |
| BmrFI | CCNGG | 2 cut(s) | 586, 756 |
| BmsI | GCATC | 3 cut(s) | 295, 860, 869 |
| BpiI | GAAGAC | 1 cut(s) | 345 |
| BpmI | CTGGAG | 1 cut(s) | 53 |
| Bpu10I | CCTNAGC | 2 cut(s) | 258, 319 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1020 |
| BsaI | GGTCTC | 2 cut(s) | 764, 1074 |
| BsaJI | CCNNGG | 3 cut(s) | 445, 495, 585 |
| BsaWI | WCCGGW | 1 cut(s) | 578 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 174, 585, 1110 |
| Bse118I | RCCGGY | 2 cut(s) | 41, 1110 |
| Bse1I | ACTGG | 3 cut(s) | 36, 730, 1147 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1020 |
| BseBI | CCWGG | 2 cut(s) | 586, 756 |
| BseDI | CCNNGG | 3 cut(s) | 445, 495, 585 |
| BseGI | GGATG | 5 cut(s) | 235, 310, 520, 529, 654 |
| BseJI | GATNNNNATC | 1 cut(s) | 1020 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 174, 585, 1110 |
| BseMII | CTCAG | 2 cut(s) | 203, 249 |
| BseNI | ACTGG | 3 cut(s) | 36, 730, 1147 |
| BseRI | GAGGAG | 2 cut(s) | 140, 1200 |
| BseXI | GCAGC | 3 cut(s) | 202, 724, 727 |
| BshFI | GGCC | 3 cut(s) | 359, 443, 719 |
| BshNI | GGYRCC | 1 cut(s) | 449 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BsiHKCI | CYCGRG | 2 cut(s) | 72, 167 |
| BsiSI | CCGG | 5 cut(s) | 42, 89, 239, 579, 1111 |
| BslFI | GGGAC | 2 cut(s) | 602, 840 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 174, 585, 1110 |
| BsmAI | GTCTC | 3 cut(s) | 615, 764, 1074 |
| BsmFI | GGGAC | 2 cut(s) | 602, 840 |
| BsmI | GAATGC | 1 cut(s) | 1053 |
| BsnI | GGCC | 3 cut(s) | 359, 443, 719 |
| Bso31I | GGTCTC | 2 cut(s) | 764, 1074 |
| BsoBI | CYCGRG | 2 cut(s) | 72, 167 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp143I | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| BspACI | CCGC | 3 cut(s) | 278, 302, 1225 |
| BspANI | GGCC | 3 cut(s) | 359, 443, 719 |
| BspCNI | CTCAG | 2 cut(s) | 204, 250 |
| BspLI | GGNNCC | 5 cut(s) | 451, 583, 590, 753, 1101 |
| BspMAI | CTGCAG | 1 cut(s) | 609 |
| BspMI | ACCTGC | 1 cut(s) | 1105 |
| BspPI | GGATC | 6 cut(s) | 270, 746, 759, 1010, 1094, 1107 |
| BspT107I | GGYRCC | 1 cut(s) | 449 |
| BspTNI | GGTCTC | 2 cut(s) | 764, 1074 |
| BsrFI | RCCGGY | 2 cut(s) | 41, 1110 |
| BsrI | ACTGG | 3 cut(s) | 36, 730, 1147 |
| BssAI | RCCGGY | 2 cut(s) | 41, 1110 |
| BssECI | CCNNGG | 3 cut(s) | 445, 495, 585 |
| BssMI | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| BssT1I | CCWWGG | 2 cut(s) | 445, 495 |
| Bst2UI | CCWGG | 2 cut(s) | 586, 756 |
| Bst4CI | ACNGT | 4 cut(s) | 680, 688, 910, 999 |
| Bst6I | CTCTTC | 1 cut(s) | 768 |
| BstC8I | GCNNGC | 2 cut(s) | 195, 1012 |
| BstDEI | CTNAG | 4 cut(s) | 212, 258, 319, 383 |
| BstF5I | GGATG | 5 cut(s) | 235, 310, 520, 529, 654 |
| BstKTI | GATC | 9 cut(s) | 136, 265, 349, 754, 839, 1018, 1024, 1071, 1102 |
| BstMAI | GTCTC | 3 cut(s) | 615, 764, 1074 |
| BstMBI | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 47, 56, 178, 187, 449, 500, 857 |
| BstNI | CCWGG | 2 cut(s) | 586, 756 |
| BstNSI | RCATGY | 4 cut(s) | 494, 558, 833, 1014 |
| BstSCI | CCNGG | 2 cut(s) | 584, 754 |
| BstSFI | CTRYAG | 1 cut(s) | 605 |
| BstV1I | GCAGC | 3 cut(s) | 202, 724, 727 |
| BstV2I | GAAGAC | 1 cut(s) | 345 |
| BstX2I | RGATCY | 4 cut(s) | 346, 751, 836, 1099 |
| BstYI | RGATCY | 4 cut(s) | 346, 751, 836, 1099 |
| BsuRI | GGCC | 3 cut(s) | 359, 443, 719 |
| BtsCI | GGATG | 5 cut(s) | 235, 310, 520, 529, 654 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 3 cut(s) | 21, 29, 995 |
| BveI | ACCTGC | 1 cut(s) | 1105 |
| Cac8I | GCNNGC | 2 cut(s) | 195, 1012 |
| Cfr10I | RCCGGY | 2 cut(s) | 41, 1110 |
| Cfr13I | GGNCC | 4 cut(s) | 392, 442, 589, 718 |
| CseI | GACGC | 1 cut(s) | 35 |
| Csp6I | GTAC | 4 cut(s) | 202, 538, 670, 1000 |
| CviAII | CATG | 8 cut(s) | 491, 534, 555, 830, 980, 1011, 1238, 1254 |
| CviQI | GTAC | 4 cut(s) | 202, 538, 670, 1000 |
| DdeI | CTNAG | 4 cut(s) | 212, 258, 319, 383 |
| DpnI | GATC | 9 cut(s) | 135, 264, 348, 753, 838, 1017, 1023, 1070, 1101 |
| DpnII | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| DraI | TTTAAA | 1 cut(s) | 747 |
| EaeI | YGGCCR | 1 cut(s) | 357 |
| Eam1104I | CTCTTC | 1 cut(s) | 768 |
| EarI | CTCTTC | 1 cut(s) | 768 |
| Eco130I | CCWWGG | 2 cut(s) | 445, 495 |
| Eco31I | GGTCTC | 2 cut(s) | 764, 1074 |
| Eco47I | GGWCC | 2 cut(s) | 392, 589 |
| Eco57I | CTGAAG | 1 cut(s) | 792 |
| Eco88I | CYCGRG | 2 cut(s) | 72, 167 |
| EcoRI | GAATTC | 1 cut(s) | 886 |
| EcoRII | CCWGG | 2 cut(s) | 584, 754 |
| EcoT14I | CCWWGG | 2 cut(s) | 445, 495 |
| EcoT22I | ATGCAT | 1 cut(s) | 556 |
| ErhI | CCWWGG | 2 cut(s) | 445, 495 |
| FaeI | CATG | 8 cut(s) | 494, 537, 558, 833, 983, 1014, 1241, 1257 |
| FaqI | GGGAC | 2 cut(s) | 602, 840 |
| FatI | CATG | 8 cut(s) | 490, 533, 554, 829, 979, 1010, 1237, 1253 |
| Fnu4HI | GCNGC | 3 cut(s) | 191, 738, 741 |
| FokI | GGATG | 5 cut(s) | 242, 317, 527, 536, 661 |
| Fsp4HI | GCNGC | 3 cut(s) | 191, 738, 741 |
| FspBI | CTAG | 2 cut(s) | 701, 809 |
| GluI | GCNGC | 3 cut(s) | 191, 738, 741 |
| GsuI | CTGGAG | 1 cut(s) | 53 |
| HaeIII | GGCC | 3 cut(s) | 359, 443, 719 |
| HapII | CCGG | 5 cut(s) | 42, 89, 239, 579, 1111 |
| HgaI | GACGC | 1 cut(s) | 35 |
| Hin1II | CATG | 8 cut(s) | 494, 537, 558, 833, 983, 1014, 1241, 1257 |
| HincII | GTYRAC | 1 cut(s) | 416 |
| HindII | GTYRAC | 1 cut(s) | 416 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| HinfI | GANTC | 5 cut(s) | 128, 155, 289, 1064, 1207 |
| HpaII | CCGG | 5 cut(s) | 42, 89, 239, 579, 1111 |
| HphI | GGTGA | 1 cut(s) | 1205 |
| Hpy166II | GTNNAC | 3 cut(s) | 416, 691, 793 |
| Hpy188I | TCNGA | 6 cut(s) | 127, 133, 213, 925, 933, 1206 |
| Hpy188III | TCNNGA | 6 cut(s) | 74, 167, 271, 662, 701, 1019 |
| Hpy8I | GTNNAC | 3 cut(s) | 416, 691, 793 |
| Hpy99I | CGWCG | 2 cut(s) | 29, 104 |
| HpyAV | CCTTC | 2 cut(s) | 334, 1070 |
| HpyCH4III | ACNGT | 4 cut(s) | 680, 688, 910, 999 |
| HpyCH4V | TGCA | 7 cut(s) | 197, 330, 380, 554, 607, 851, 1241 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 47, 56, 178, 187, 449, 500, 857 |
| HpyF3I | CTNAG | 4 cut(s) | 212, 258, 319, 383 |
| Hsp92II | CATG | 8 cut(s) | 494, 537, 558, 833, 983, 1014, 1241, 1257 |
| Kzo9I | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| LmnI | GCTCC | 2 cut(s) | 581, 997 |
| Lsp1109I | GCAGC | 3 cut(s) | 202, 724, 727 |
| LweI | GCATC | 3 cut(s) | 295, 860, 869 |
| MaeI | CTAG | 2 cut(s) | 701, 809 |
| MaeIII | GTNAC | 2 cut(s) | 323, 574 |
| MalI | GATC | 9 cut(s) | 135, 264, 348, 753, 838, 1017, 1023, 1070, 1101 |
| MboI | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| MboII | GAAGA | 5 cut(s) | 232, 345, 349, 785, 961 |
| MfeI | CAATTG | 1 cut(s) | 1181 |
| MflI | RGATCY | 4 cut(s) | 346, 751, 836, 1099 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MluCI | AATT | 7 cut(s) | 529, 814, 880, 886, 1121, 1181, 1233 |
| MlyI | GAGTC | 1 cut(s) | 1201 |
| Mph1103I | ATGCAT | 1 cut(s) | 556 |
| MroXI | GAANNNNTTC | 1 cut(s) | 777 |
| MseI | TTAA | 6 cut(s) | 68, 282, 675, 746, 821, 975 |
| MslI | CAYNNNNRTG | 1 cut(s) | 984 |
| MspI | CCGG | 5 cut(s) | 42, 89, 239, 579, 1111 |
| MspR9I | CCNGG | 2 cut(s) | 586, 756 |
| MunI | CAATTG | 1 cut(s) | 1181 |
| Mva1269I | GAATGC | 1 cut(s) | 1053 |
| MvaI | CCWGG | 2 cut(s) | 586, 756 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 47, 56, 178, 187, 449, 500, 857 |
| NdeII | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| NlaIII | CATG | 8 cut(s) | 494, 537, 558, 833, 983, 1014, 1241, 1257 |
| NlaIV | GGNNCC | 5 cut(s) | 451, 583, 590, 753, 1101 |
| NmuCI | GTSAC | 1 cut(s) | 574 |
| NsiI | ATGCAT | 1 cut(s) | 556 |
| NspI | RCATGY | 4 cut(s) | 494, 558, 833, 1014 |
| PaeI | GCATGC | 1 cut(s) | 1014 |
| PaeR7I | CTCGAG | 1 cut(s) | 72 |
| PctI | GAATGC | 1 cut(s) | 1053 |
| PdmI | GAANNNNTTC | 1 cut(s) | 777 |
| PfeI | GAWTC | 4 cut(s) | 128, 155, 289, 1064 |
| PkrI | GCNGC | 3 cut(s) | 192, 739, 742 |
| PleI | GAGTC | 1 cut(s) | 1201 |
| PpsI | GAGTC | 1 cut(s) | 1201 |
| Psp6I | CCWGG | 2 cut(s) | 584, 754 |
| PspGI | CCWGG | 2 cut(s) | 584, 754 |
| PspN4I | GGNNCC | 5 cut(s) | 451, 583, 590, 753, 1101 |
| PspPI | GGNCC | 4 cut(s) | 392, 442, 589, 718 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1020, 1052 |
| PstI | CTGCAG | 1 cut(s) | 609 |
| PsuI | RGATCY | 4 cut(s) | 346, 751, 836, 1099 |
| RsaI | GTAC | 4 cut(s) | 203, 539, 671, 1001 |
| RsaNI | GTAC | 4 cut(s) | 202, 538, 670, 1000 |
| RseI | CAYNNNNRTG | 1 cut(s) | 984 |
| SaqAI | TTAA | 6 cut(s) | 68, 282, 675, 746, 821, 975 |
| SatI | GCNGC | 3 cut(s) | 191, 738, 741 |
| Sau3AI | GATC | 9 cut(s) | 133, 262, 346, 751, 836, 1015, 1021, 1068, 1099 |
| Sau96I | GGNCC | 4 cut(s) | 392, 442, 589, 718 |
| SchI | GAGTC | 1 cut(s) | 1201 |
| ScrFI | CCNGG | 2 cut(s) | 586, 756 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SfaNI | GCATC | 3 cut(s) | 295, 860, 869 |
| SfcI | CTRYAG | 1 cut(s) | 605 |
| Sfr274I | CTCGAG | 1 cut(s) | 72 |
| SinI | GGWCC | 2 cut(s) | 392, 589 |
| SlaI | CTCGAG | 1 cut(s) | 72 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 984 |
| SmlI | CTYRAG | 1 cut(s) | 72 |
| SmoI | CTYRAG | 1 cut(s) | 72 |
| SphI | GCATGC | 1 cut(s) | 1014 |
| Sse9I | AATT | 7 cut(s) | 529, 814, 880, 886, 1121, 1181, 1233 |
| SsiI | CCGC | 3 cut(s) | 278, 302, 1225 |
| SspMI | CTAG | 2 cut(s) | 701, 809 |
| StyD4I | CCNGG | 2 cut(s) | 584, 754 |
| StyI | CCWWGG | 2 cut(s) | 445, 495 |
| TaaI | ACNGT | 4 cut(s) | 680, 688, 910, 999 |
| TaqI | TCGA | 6 cut(s) | 73, 153, 272, 429, 1067, 1119 |
| TasI | AATT | 7 cut(s) | 529, 814, 880, 886, 1121, 1181, 1233 |
| TatI | WGTACW | 2 cut(s) | 669, 999 |
| TfiI | GAWTC | 4 cut(s) | 128, 155, 289, 1064 |
| Tru1I | TTAA | 6 cut(s) | 68, 282, 675, 746, 821, 975 |
| Tru9I | TTAA | 6 cut(s) | 68, 282, 675, 746, 821, 975 |
| TscAI | CASTG | 3 cut(s) | 21, 36, 1002 |
| TseFI | GTSAC | 1 cut(s) | 574 |
| TseI | GCWGC | 3 cut(s) | 190, 737, 740 |
| Tsp45I | GTSAC | 1 cut(s) | 574 |
| TspDTI | ATGAA | 8 cut(s) | 492, 522, 657, 665, 726, 961, 996, 1226 |
| TspRI | CASTG | 3 cut(s) | 21, 36, 1002 |
| VpaK11BI | GGWCC | 2 cut(s) | 392, 589 |
| XapI | RAATTY | 4 cut(s) | 529, 880, 886, 1121 |
| XbaI | TCTAGA | 1 cut(s) | 700 |
| XceI | RCATGY | 4 cut(s) | 494, 558, 833, 1014 |
| XhoI | CTCGAG | 1 cut(s) | 72 |
| XmnI | GAANNNNTTC | 1 cut(s) | 777 |
| XspI | CTAG | 2 cut(s) | 701, 809 |
| Zsp2I | ATGCAT | 1 cut(s) | 556 |