Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 2 - 64 | 1.4e-09 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 220 |
| AciI | CCGC | 1 cut(s) | 116 |
| AgsI | TTSAA | 1 cut(s) | 134 |
| AjnI | CCWGG | 1 cut(s) | 12 |
| AluBI | AGCT | 2 cut(s) | 21, 140 |
| AluI | AGCT | 2 cut(s) | 21, 140 |
| Alw26I | GTCTC | 1 cut(s) | 33 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| AsuNHI | GCTAGC | 1 cut(s) | 17 |
| BanI | GGYRCC | 1 cut(s) | 220 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BciT130I | CCWGG | 1 cut(s) | 14 |
| BcoDI | GTCTC | 1 cut(s) | 33 |
| BfaI | CTAG | 3 cut(s) | 18, 90, 137 |
| BfmI | CTRYAG | 1 cut(s) | 102 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 229 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 1 cut(s) | 14 |
| BmiI | GGNNCC | 1 cut(s) | 222 |
| BmrFI | CCNGG | 1 cut(s) | 14 |
| BmtI | GCTAGC | 1 cut(s) | 21 |
| BsaJI | CCNNGG | 1 cut(s) | 224 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 220 |
| BseBI | CCWGG | 1 cut(s) | 14 |
| BseDI | CCNNGG | 1 cut(s) | 224 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| BshNI | GGYRCC | 1 cut(s) | 220 |
| BsmAI | GTCTC | 1 cut(s) | 33 |
| BspACI | CCGC | 1 cut(s) | 116 |
| BspLI | GGNNCC | 1 cut(s) | 222 |
| BspMAI | CTGCAG | 1 cut(s) | 106 |
| BspOI | GCTAGC | 1 cut(s) | 21 |
| BspT107I | GGYRCC | 1 cut(s) | 220 |
| BssECI | CCNNGG | 1 cut(s) | 224 |
| BssT1I | CCWWGG | 1 cut(s) | 224 |
| Bst2UI | CCWGG | 1 cut(s) | 14 |
| Bst6I | CTCTTC | 1 cut(s) | 76 |
| BstC8I | GCNNGC | 1 cut(s) | 19 |
| BstMAI | GTCTC | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 229 |
| BstNI | CCWGG | 1 cut(s) | 14 |
| BstSCI | CCNGG | 1 cut(s) | 12 |
| BstSFI | CTRYAG | 1 cut(s) | 102 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| Cac8I | GCNNGC | 1 cut(s) | 19 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 7 cut(s) | 17, 21, 51, 101, 128, 140, 232 |
| CviKI_1 | RGCY | 7 cut(s) | 17, 21, 51, 101, 128, 140, 232 |
| Eam1104I | CTCTTC | 1 cut(s) | 76 |
| EarI | CTCTTC | 1 cut(s) | 76 |
| Eco130I | CCWWGG | 1 cut(s) | 224 |
| Eco32I | GATATC | 1 cut(s) | 85 |
| EcoRII | CCWGG | 1 cut(s) | 12 |
| EcoRV | GATATC | 1 cut(s) | 85 |
| EcoT14I | CCWWGG | 1 cut(s) | 224 |
| ErhI | CCWWGG | 1 cut(s) | 224 |
| FaeI | CATG | 1 cut(s) | 115 |
| FaiI | YATR | 7 cut(s) | 24, 36, 59, 113, 162, 166, 191 |
| FatI | CATG | 1 cut(s) | 111 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| FspBI | CTAG | 3 cut(s) | 18, 90, 137 |
| GluI | GCNGC | 1 cut(s) | 102 |
| Hin1II | CATG | 1 cut(s) | 115 |
| HinfI | GANTC | 2 cut(s) | 5, 179 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| HpyCH4V | TGCA | 1 cut(s) | 104 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 229 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| LpnPI | CCDG | 2 cut(s) | 26, 203 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| MaeI | CTAG | 3 cut(s) | 18, 90, 137 |
| MboII | GAAGA | 2 cut(s) | 63, 174 |
| MmeI | TCCRAC | 1 cut(s) | 33 |
| MnlI | CCTC | 4 cut(s) | 100, 166, 222, 222 |
| MseI | TTAA | 1 cut(s) | 123 |
| MspR9I | CCNGG | 1 cut(s) | 14 |
| MvaI | CCWGG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 229 |
| NheI | GCTAGC | 1 cut(s) | 17 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NlaIV | GGNNCC | 1 cut(s) | 222 |
| PfeI | GAWTC | 1 cut(s) | 179 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| Psp6I | CCWGG | 1 cut(s) | 12 |
| PspGI | CCWGG | 1 cut(s) | 12 |
| PspN4I | GGNNCC | 1 cut(s) | 222 |
| PstI | CTGCAG | 1 cut(s) | 106 |
| SaqAI | TTAA | 1 cut(s) | 123 |
| SatI | GCNGC | 1 cut(s) | 102 |
| ScrFI | CCNGG | 1 cut(s) | 14 |
| SetI | ASST | 5 cut(s) | 23, 64, 111, 142, 177 |
| SfcI | CTRYAG | 1 cut(s) | 102 |
| SsiI | CCGC | 1 cut(s) | 116 |
| SspMI | CTAG | 3 cut(s) | 18, 90, 137 |
| StyD4I | CCNGG | 1 cut(s) | 12 |
| StyI | CCWWGG | 1 cut(s) | 224 |
| TfiI | GAWTC | 1 cut(s) | 179 |
| Tru1I | TTAA | 1 cut(s) | 123 |
| Tru9I | TTAA | 1 cut(s) | 123 |
| TseI | GCWGC | 1 cut(s) | 101 |
| TspGWI | ACGGA | 1 cut(s) | 194 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 20 |
| XspI | CTAG | 3 cut(s) | 18, 90, 137 |