Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 196, 231, 416 |
| AcyI | GRCGYC | 1 cut(s) | 376 |
| AgsI | TTSAA | 1 cut(s) | 331 |
| AluBI | AGCT | 3 cut(s) | 130, 239, 274 |
| AluI | AGCT | 3 cut(s) | 130, 239, 274 |
| ApoI | RAATTY | 3 cut(s) | 196, 231, 416 |
| BccI | CCATC | 2 cut(s) | 167, 360 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BmsI | GCATC | 1 cut(s) | 133 |
| BsaHI | GRCGYC | 1 cut(s) | 376 |
| Bse3DI | GCAATG | 1 cut(s) | 58 |
| BseMI | GCAATG | 1 cut(s) | 58 |
| BseRI | GAGGAG | 1 cut(s) | 349 |
| BsgI | GTGCAG | 1 cut(s) | 201 |
| Bsp143I | GATC | 2 cut(s) | 59, 208 |
| BsrDI | GCAATG | 1 cut(s) | 58 |
| BssMI | GATC | 2 cut(s) | 59, 208 |
| BssNI | GRCGYC | 1 cut(s) | 376 |
| BstACI | GRCGYC | 1 cut(s) | 376 |
| BstKTI | GATC | 2 cut(s) | 62, 211 |
| BstMBI | GATC | 2 cut(s) | 59, 208 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| CseI | GACGC | 1 cut(s) | 365 |
| CviAII | CATG | 3 cut(s) | 77, 262, 425 |
| CviJI | RGCY | 6 cut(s) | 88, 130, 177, 239, 274, 320 |
| CviKI_1 | RGCY | 6 cut(s) | 88, 130, 177, 239, 274, 320 |
| DpnI | GATC | 2 cut(s) | 61, 210 |
| DpnII | GATC | 2 cut(s) | 59, 208 |
| FaeI | CATG | 2 cut(s) | 80, 265 |
| FaiI | YATR | 8 cut(s) | 17, 78, 145, 263, 317, 324, 412, 426 |
| FatI | CATG | 2 cut(s) | 76, 261 |
| HgaI | GACGC | 1 cut(s) | 365 |
| Hin1I | GRCGYC | 1 cut(s) | 376 |
| Hin1II | CATG | 2 cut(s) | 80, 265 |
| HinfI | GANTC | 1 cut(s) | 287 |
| Hpy166II | GTNNAC | 1 cut(s) | 341 |
| Hpy188I | TCNGA | 4 cut(s) | 160, 170, 229, 259 |
| Hpy188III | TCNNGA | 1 cut(s) | 331 |
| Hpy8I | GTNNAC | 1 cut(s) | 341 |
| HpyCH4V | TGCA | 2 cut(s) | 124, 218 |
| Hsp92I | GRCGYC | 1 cut(s) | 376 |
| Hsp92II | CATG | 2 cut(s) | 80, 265 |
| Kzo9I | GATC | 2 cut(s) | 59, 208 |
| LpnPI | CCDG | 2 cut(s) | 260, 329 |
| LweI | GCATC | 1 cut(s) | 133 |
| MaeIII | GTNAC | 1 cut(s) | 403 |
| MalI | GATC | 2 cut(s) | 61, 210 |
| MboI | GATC | 2 cut(s) | 59, 208 |
| MboII | GAAGA | 2 cut(s) | 282, 413 |
| MfeI | CAATTG | 2 cut(s) | 63, 348 |
| MluCI | AATT | 7 cut(s) | 63, 82, 137, 196, 231, 348, 416 |
| MmeI | TCCRAC | 1 cut(s) | 264 |
| MnlI | CCTC | 3 cut(s) | 259, 327, 402 |
| MseI | TTAA | 1 cut(s) | 90 |
| MspA1I | CMGCKG | 1 cut(s) | 239 |
| MunI | CAATTG | 2 cut(s) | 63, 348 |
| NdeII | GATC | 2 cut(s) | 59, 208 |
| NlaIII | CATG | 2 cut(s) | 80, 265 |
| PfeI | GAWTC | 1 cut(s) | 287 |
| PvuII | CAGCTG | 1 cut(s) | 239 |
| SaqAI | TTAA | 1 cut(s) | 90 |
| Sau3AI | GATC | 2 cut(s) | 59, 208 |
| SetI | ASST | 3 cut(s) | 132, 241, 276 |
| SfaNI | GCATC | 1 cut(s) | 133 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| SgeI | CNNG | 9 cut(s) | 22, 89, 143, 192, 274, 287, 343, 356, 405 |
| Sse9I | AATT | 7 cut(s) | 63, 82, 137, 196, 231, 348, 416 |
| TaqI | TCGA | 2 cut(s) | 58, 394 |
| TasI | AATT | 7 cut(s) | 63, 82, 137, 196, 231, 348, 416 |
| TfiI | GAWTC | 1 cut(s) | 287 |
| Tru1I | TTAA | 1 cut(s) | 90 |
| Tru9I | TTAA | 1 cut(s) | 90 |
| TspDTI | ATGAA | 2 cut(s) | 154, 413 |
| XapI | RAATTY | 3 cut(s) | 196, 231, 416 |