ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 237 |
| AcsI | RAATTY | 1 cut(s) | 37 |
| AcyI | GRCGYC | 1 cut(s) | 238 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 251 |
| AgsI | TTSAA | 2 cut(s) | 116, 178 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| ApoI | RAATTY | 1 cut(s) | 37 |
| AspLEI | GCGC | 1 cut(s) | 240 |
| BanI | GGYRCC | 1 cut(s) | 237 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BccI | CCATC | 1 cut(s) | 249 |
| BclI | TGATCA | 1 cut(s) | 331 |
| BfaI | CTAG | 4 cut(s) | 42, 123, 192, 216 |
| BfoI | RGCGCY | 1 cut(s) | 241 |
| BmiI | GGNNCC | 1 cut(s) | 239 |
| BpmI | CTGGAG | 1 cut(s) | 159 |
| BsaHI | GRCGYC | 1 cut(s) | 238 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 277, 307 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 251 |
| Bse1I | ACTGG | 1 cut(s) | 142 |
| BseGI | GGATG | 2 cut(s) | 102, 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 251 |
| BseNI | ACTGG | 1 cut(s) | 142 |
| BseRI | GAGGAG | 1 cut(s) | 234 |
| BshNI | GGYRCC | 1 cut(s) | 237 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 1 cut(s) | 214 |
| Bsp143I | GATC | 2 cut(s) | 163, 331 |
| BspLI | GGNNCC | 1 cut(s) | 239 |
| BspT107I | GGYRCC | 1 cut(s) | 237 |
| BsrI | ACTGG | 1 cut(s) | 142 |
| BssMI | GATC | 2 cut(s) | 163, 331 |
| BssNI | GRCGYC | 1 cut(s) | 238 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| Bst6I | CTCTTC | 1 cut(s) | 283 |
| BstACI | GRCGYC | 1 cut(s) | 238 |
| BstF5I | GGATG | 2 cut(s) | 102, 260 |
| BstH2I | RGCGCY | 1 cut(s) | 241 |
| BstHHI | GCGC | 1 cut(s) | 240 |
| BstKTI | GATC | 2 cut(s) | 166, 334 |
| BstMBI | GATC | 2 cut(s) | 163, 331 |
| BtsCI | GGATG | 2 cut(s) | 102, 260 |
| BtsI | GCAGTG | 1 cut(s) | 214 |
| BtsIMutI | CAGTG | 1 cut(s) | 214 |
| CfoI | GCGC | 1 cut(s) | 240 |
| CviAII | CATG | 1 cut(s) | 77 |
| CviJI | RGCY | 5 cut(s) | 8, 119, 191, 281, 309 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 119, 191, 281, 309 |
| DinI | GGCGCC | 1 cut(s) | 239 |
| DpnI | GATC | 2 cut(s) | 165, 333 |
| DpnII | GATC | 2 cut(s) | 163, 331 |
| Eam1104I | CTCTTC | 1 cut(s) | 283 |
| EarI | CTCTTC | 1 cut(s) | 283 |
| EcoRI | GAATTC | 1 cut(s) | 37 |
| EcoT22I | ATGCAT | 1 cut(s) | 150 |
| EgeI | GGCGCC | 1 cut(s) | 239 |
| EheI | GGCGCC | 1 cut(s) | 239 |
| FaeI | CATG | 1 cut(s) | 80 |
| FaiI | YATR | 7 cut(s) | 25, 32, 34, 78, 111, 150, 312 |
| FatI | CATG | 1 cut(s) | 76 |
| FauNDI | CATATG | 1 cut(s) | 32 |
| FbaI | TGATCA | 1 cut(s) | 331 |
| FokI | GGATG | 2 cut(s) | 109, 267 |
| FspBI | CTAG | 4 cut(s) | 42, 123, 192, 216 |
| GlaI | GCGC | 1 cut(s) | 239 |
| GsuI | CTGGAG | 1 cut(s) | 159 |
| HaeII | RGCGCY | 1 cut(s) | 241 |
| HhaI | GCGC | 1 cut(s) | 240 |
| Hin1I | GRCGYC | 1 cut(s) | 238 |
| Hin1II | CATG | 1 cut(s) | 80 |
| Hin6I | GCGC | 1 cut(s) | 238 |
| HinP1I | GCGC | 1 cut(s) | 238 |
| HincII | GTYRAC | 1 cut(s) | 268 |
| HindII | GTYRAC | 1 cut(s) | 268 |
| HindIII | AAGCTT | 1 cut(s) | 117 |
| HpaI | GTTAAC | 1 cut(s) | 268 |
| Hpy166II | GTNNAC | 1 cut(s) | 268 |
| Hpy188I | TCNGA | 1 cut(s) | 56 |
| Hpy188III | TCNNGA | 4 cut(s) | 42, 161, 252, 325 |
| Hpy8I | GTNNAC | 1 cut(s) | 268 |
| HpyAV | CCTTC | 1 cut(s) | 258 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 2 cut(s) | 80, 148 |
| Hsp92I | GRCGYC | 1 cut(s) | 238 |
| Hsp92II | CATG | 1 cut(s) | 80 |
| HspAI | GCGC | 1 cut(s) | 238 |
| KasI | GGCGCC | 1 cut(s) | 237 |
| Ksp22I | TGATCA | 1 cut(s) | 331 |
| KspAI | GTTAAC | 1 cut(s) | 268 |
| Kzo9I | GATC | 2 cut(s) | 163, 331 |
| LmnI | GCTCC | 1 cut(s) | 217 |
| LpnPI | CCDG | 4 cut(s) | 78, 123, 237, 310 |
| MaeI | CTAG | 4 cut(s) | 42, 123, 192, 216 |
| MaeIII | GTNAC | 1 cut(s) | 133 |
| MalI | GATC | 2 cut(s) | 165, 333 |
| MboI | GATC | 2 cut(s) | 163, 331 |
| MboII | GAAGA | 2 cut(s) | 158, 300 |
| MhlI | GDGCHC | 1 cut(s) | 214 |
| MluCI | AATT | 2 cut(s) | 37, 156 |
| Mly113I | GGCGCC | 1 cut(s) | 238 |
| MnlI | CCTC | 6 cut(s) | 213, 220, 252, 255, 284, 299 |
| Mph1103I | ATGCAT | 1 cut(s) | 150 |
| MseI | TTAA | 2 cut(s) | 261, 267 |
| NarI | GGCGCC | 1 cut(s) | 238 |
| NdeI | CATATG | 1 cut(s) | 32 |
| NdeII | GATC | 2 cut(s) | 163, 331 |
| NlaIII | CATG | 1 cut(s) | 80 |
| NlaIV | GGNNCC | 1 cut(s) | 239 |
| NsiI | ATGCAT | 1 cut(s) | 150 |
| PluTI | GGCGCC | 1 cut(s) | 241 |
| PspN4I | GGNNCC | 1 cut(s) | 239 |
| SaqAI | TTAA | 2 cut(s) | 261, 267 |
| Sau3AI | GATC | 2 cut(s) | 163, 331 |
| SduI | GDGCHC | 1 cut(s) | 214 |
| SetI | ASST | 6 cut(s) | 54, 121, 231, 267, 295, 301 |
| SfoI | GGCGCC | 1 cut(s) | 239 |
| Sse9I | AATT | 2 cut(s) | 37, 156 |
| SspDI | GGCGCC | 1 cut(s) | 237 |
| SspMI | CTAG | 4 cut(s) | 42, 123, 192, 216 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaqI | TCGA | 1 cut(s) | 169 |
| TasI | AATT | 2 cut(s) | 37, 156 |
| Tru1I | TTAA | 2 cut(s) | 261, 267 |
| Tru9I | TTAA | 2 cut(s) | 261, 267 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TspDTI | ATGAA | 2 cut(s) | 19, 65 |
| TspRI | CASTG | 1 cut(s) | 214 |
| XapI | RAATTY | 1 cut(s) | 37 |
| XbaI | TCTAGA | 1 cut(s) | 41 |
| XspI | CTAG | 4 cut(s) | 42, 123, 192, 216 |
| Zsp2I | ATGCAT | 1 cut(s) | 150 |