Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 176 |
| AfaI | GTAC | 2 cut(s) | 8, 14 |
| AgsI | TTSAA | 1 cut(s) | 127 |
| AluBI | AGCT | 2 cut(s) | 213, 239 |
| AluI | AGCT | 2 cut(s) | 213, 239 |
| Alw26I | GTCTC | 1 cut(s) | 162 |
| AoxI | GGCC | 1 cut(s) | 196 |
| AsuHPI | GGTGA | 1 cut(s) | 242 |
| BcoDI | GTCTC | 1 cut(s) | 162 |
| BfaI | CTAG | 1 cut(s) | 210 |
| BmiI | GGNNCC | 1 cut(s) | 106 |
| BmsI | GCATC | 1 cut(s) | 192 |
| BpuEI | CTTGAG | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 1 cut(s) | 84 |
| BseDI | CCNNGG | 1 cut(s) | 84 |
| BshFI | GGCC | 1 cut(s) | 198 |
| BslFI | GGGAC | 1 cut(s) | 203 |
| BsmAI | GTCTC | 1 cut(s) | 162 |
| BsmBI | CGTCTC | 1 cut(s) | 162 |
| BsmFI | GGGAC | 1 cut(s) | 203 |
| BsnI | GGCC | 1 cut(s) | 198 |
| Bsp1407I | TGTACA | 1 cut(s) | 12 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspANI | GGCC | 1 cut(s) | 198 |
| BspLI | GGNNCC | 1 cut(s) | 106 |
| BsrGI | TGTACA | 1 cut(s) | 12 |
| BssECI | CCNNGG | 1 cut(s) | 84 |
| BssMI | GATC | 1 cut(s) | 91 |
| Bst4CI | ACNGT | 1 cut(s) | 104 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstAUI | TGTACA | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 245 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMAI | GTCTC | 1 cut(s) | 162 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 156 |
| BstNSI | RCATGY | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 198 |
| Csp6I | GTAC | 2 cut(s) | 7, 13 |
| CviAII | CATG | 1 cut(s) | 26 |
| CviJI | RGCY | 3 cut(s) | 198, 213, 239 |
| CviKI_1 | RGCY | 3 cut(s) | 198, 213, 239 |
| CviQI | GTAC | 2 cut(s) | 7, 13 |
| DdeI | CTNAG | 1 cut(s) | 245 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 176 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 176 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| Eco147I | AGGCCT | 1 cut(s) | 198 |
| Esp3I | CGTCTC | 1 cut(s) | 162 |
| FaeI | CATG | 1 cut(s) | 29 |
| FaiI | YATR | 4 cut(s) | 27, 62, 254, 292 |
| FaqI | GGGAC | 1 cut(s) | 203 |
| FatI | CATG | 1 cut(s) | 25 |
| FspBI | CTAG | 1 cut(s) | 210 |
| HaeIII | GGCC | 1 cut(s) | 198 |
| Hin1II | CATG | 1 cut(s) | 29 |
| HinfI | GANTC | 3 cut(s) | 130, 233, 249 |
| HphI | GGTGA | 1 cut(s) | 242 |
| Hpy166II | GTNNAC | 1 cut(s) | 15 |
| Hpy188III | TCNNGA | 3 cut(s) | 98, 127, 269 |
| Hpy8I | GTNNAC | 1 cut(s) | 15 |
| HpyAV | CCTTC | 2 cut(s) | 88, 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 104 |
| HpyCH4V | TGCA | 1 cut(s) | 25 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 156 |
| HpyF3I | CTNAG | 1 cut(s) | 245 |
| Hsp92II | CATG | 1 cut(s) | 29 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LmnI | GCTCC | 1 cut(s) | 156 |
| LpnPI | CCDG | 2 cut(s) | 172, 199 |
| LweI | GCATC | 1 cut(s) | 192 |
| MaeI | CTAG | 1 cut(s) | 210 |
| MaeIII | GTNAC | 1 cut(s) | 266 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MboII | GAAGA | 2 cut(s) | 86, 272 |
| MluCI | AATT | 2 cut(s) | 37, 46 |
| MlyI | GAGTC | 1 cut(s) | 243 |
| MmeI | TCCRAC | 1 cut(s) | 132 |
| MnlI | CCTC | 3 cut(s) | 79, 124, 221 |
| MseI | TTAA | 1 cut(s) | 144 |
| MslI | CAYNNNNRTG | 2 cut(s) | 63, 273 |
| MspA1I | CMGCKG | 1 cut(s) | 239 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 156 |
| NdeII | GATC | 1 cut(s) | 91 |
| NlaIII | CATG | 1 cut(s) | 29 |
| NlaIV | GGNNCC | 1 cut(s) | 106 |
| NmeAIII | GCCGAG | 2 cut(s) | 109, 114 |
| NmuCI | GTSAC | 1 cut(s) | 266 |
| NspI | RCATGY | 1 cut(s) | 29 |
| PceI | AGGCCT | 1 cut(s) | 198 |
| PfeI | GAWTC | 2 cut(s) | 130, 233 |
| PleI | GAGTC | 1 cut(s) | 243 |
| PpsI | GAGTC | 1 cut(s) | 243 |
| PspN4I | GGNNCC | 1 cut(s) | 106 |
| PvuII | CAGCTG | 1 cut(s) | 239 |
| RsaI | GTAC | 2 cut(s) | 8, 14 |
| RsaNI | GTAC | 2 cut(s) | 7, 13 |
| RseI | CAYNNNNRTG | 2 cut(s) | 63, 273 |
| SaqAI | TTAA | 1 cut(s) | 144 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| SchI | GAGTC | 1 cut(s) | 243 |
| SetI | ASST | 6 cut(s) | 90, 116, 211, 215, 232, 241 |
| SfaNI | GCATC | 1 cut(s) | 192 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 63, 273 |
| SmlI | CTYRAG | 1 cut(s) | 200 |
| SmoI | CTYRAG | 1 cut(s) | 200 |
| Sse9I | AATT | 2 cut(s) | 37, 46 |
| SseBI | AGGCCT | 1 cut(s) | 198 |
| SspMI | CTAG | 1 cut(s) | 210 |
| StuI | AGGCCT | 1 cut(s) | 198 |
| TaaI | ACNGT | 1 cut(s) | 104 |
| TasI | AATT | 2 cut(s) | 37, 46 |
| TatI | WGTACW | 2 cut(s) | 6, 12 |
| TfiI | GAWTC | 2 cut(s) | 130, 233 |
| Tru1I | TTAA | 1 cut(s) | 144 |
| Tru9I | TTAA | 1 cut(s) | 144 |
| TseFI | GTSAC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 1 cut(s) | 266 |
| TspGWI | ACGGA | 1 cut(s) | 31 |
| XceI | RCATGY | 1 cut(s) | 29 |
| XspI | CTAG | 1 cut(s) | 210 |