MD17G1103400.v1.1

EamA-like transporter family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000031
Physical Location & Seq
Forward (+)
8780576 .. 8784377
3802 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1103400.v1.1.491

Sequence Viewer

Length: 1170 bp
ATGTCGTCGTCGGCGGAGACCAGTGACGGAGAGCACGAGGTGGAGCTGATCGTGCACGACGCATCACCATCGGGGGATGACGGTGGCGCGGCCGTCGCTGACGAGATTGCCCCGCTCTTGACGCAGCCGGAGAAGGCCAAAATCAATATTTTCACCCTCTCTTATCCTCGAAAAACATCTAAGGATACAGTACGGAAAGCACTTGAAACGGAGACGTCCGCAGTAGCTCAATTTGTTTTGTGGGTATGGAGTGGATCGAGATACTCCGGTCTAATGTGTATGGCCATCTCATCTACCATCTACTTTGTCATGGAAGTTTTTGCAGATGTTTTTTCTGTTCAGTCCATTCCTTTGCTTGAGGCTGCATTTACAAGGTGTACGATTATCTTGGTATTGTCATTTGTGTGGCTGAGAAAGTGTGGACAGCCAATATCTGGGCTGGCAAATGTAAAAAATCTTTTGATTTCCAGAGCCCTTACTGGATATCTCTCACTGATGTGTTTCATTTATTGCATTCAAAGGCTACCTTTGTCTCAGGCTATTGTATTGAGCTTCACAACTCCAATAATGGCTTCGGTTGTGGCAAGAATCATTCTACATGAGAAGTATAAAATTTCAGACGTTGGAGGTATTGCATGCAGTTTCTTTGGTGTGCTCTTCATTTATCGACAAATGCTGACCGCACAAGATAAAAATGGAGGAGAGAATACAAGTGTAAGGGGAAGCAGCTATATCTTTGCAGTCTTGGCCGGTTTACTTTCATCCATAACTGGTGGAATCAGCTACTGCCTTACAAAGGCTGGATCAAAGGCATCTGATCAGCCACTGTTGACAGTCTTTTCATTTGGTTTACTCGCGAGTCCTGCTTCAGCAGCAATTTGTTTGTTTACCCTTGAGGATTTTGTTTTCCCAGATTTGCATTCCTTTTCAGTTATGATTCTACTTGGTGTTCTGGCCTTTTTTGCAGAGGTATTCTTGGCACGCGGATTGCAGCTTGAGAAAACCGGCAAAGTTGCAAATGTTATATACATGGAGGCTGCCCTGTCACAGTTATGGGGCATTGGTTCATCAAGGATAGCTCCATCCTTTGGTCGAATTATCGGATGTCTGCTTATTTTCATTTCTGTCAGTTGCACCATGTATTTTGGACCCGATAAAGATACGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EamA

Protein Analysis

390

Amino Acids

42.04

Weight (kDa)

5.89

Isoelectric Point (pI)

34.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 90 - 222 1.2e-13 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000031)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05755
fragaria_vesca FvH4_1g13571 FvH4_2g06951 FvH4_2g09612 FvH4_3g24991 FvH4_3g39131 FvH4_4g01331 FvH4_5g11071 FvH4_5g22144 FvH4_5g22144 FvH4_5g27541 FvH4_5g38601 FvH4_6g09211 FvH4_6g17161 FvH4_6g30101 FvH4_6g30102 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g51131 FvH4_7g28851
malus_domestica MD02G1021900.v1.1 MD02G1050700.v1.1 MD02G1314000.v1.1 MD05G1244100.v1.1 MD07G1021300.v1.1 MD09G1113200.v1.1 MD09G1113300.v1.1 MD13G1019000.v1.1 MD17G1103400.v1.1
prunus_persica Prupe.1G484600_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.4G283800_v2.0.a1
pyrus_communis pycom01g13080 pycom03g05530 pycom05g09360 pycom05g20240 pycom06g06350 pycom06g14660 pycom09g03750 pycom13g22930 pycom14g00800 pycom15g35930 pycom17g09770 pycom17g25010
rosa_chinensis RchiOBHm_Chr1g0316991 RchiOBHm_Chr1g0321411 RchiOBHm_Chr1g0341061 RchiOBHm_Chr1g0352021 RchiOBHm_Chr1g0357231 RchiOBHm_Chr1g0361641 RchiOBHm_Chr1g0379151 RchiOBHm_Chr2g0084861 RchiOBHm_Chr2g0092021 RchiOBHm_Chr2g0102721 RchiOBHm_Chr2g0119161 RchiOBHm_Chr2g0120021 RchiOBHm_Chr2g0120031 RchiOBHm_Chr2g0120451 RchiOBHm_Chr2g0129631 RchiOBHm_Chr2g0133661 RchiOBHm_Chr2g0140031 RchiOBHm_Chr2g0154361 RchiOBHm_Chr2g0158311 RchiOBHm_Chr2g0160431 RchiOBHm_Chr2g0167951 RchiOBHm_Chr2g0168801 RchiOBHm_Chr3g0451531 RchiOBHm_Chr3g0453641 RchiOBHm_Chr3g0453831 RchiOBHm_Chr3g0455401 RchiOBHm_Chr3g0457461 RchiOBHm_Chr3g0459251 RchiOBHm_Chr3g0462451 RchiOBHm_Chr3g0465511 RchiOBHm_Chr3g0466111 RchiOBHm_Chr3g0469201 RchiOBHm_Chr3g0472791 RchiOBHm_Chr3g0472841 RchiOBHm_Chr4g0391691 RchiOBHm_Chr4g0393351 RchiOBHm_Chr4g0395061 RchiOBHm_Chr4g0395191 RchiOBHm_Chr4g0397541 RchiOBHm_Chr4g0402261 RchiOBHm_Chr4g0409421 RchiOBHm_Chr4g0417481 RchiOBHm_Chr4g0428291 RchiOBHm_Chr4g0434281 RchiOBHm_Chr4g0437231 RchiOBHm_Chr4g0439261 RchiOBHm_Chr5g0000531 RchiOBHm_Chr5g0016091 RchiOBHm_Chr5g0018801 RchiOBHm_Chr5g0026401 RchiOBHm_Chr5g0051821 RchiOBHm_Chr5g0062261 RchiOBHm_Chr5g0070711 RchiOBHm_Chr5g0074731 RchiOBHm_Chr5g0077831 RchiOBHm_Chr6g0251621 RchiOBHm_Chr6g0253181 RchiOBHm_Chr6g0258241 RchiOBHm_Chr6g0259301 RchiOBHm_Chr6g0263381 RchiOBHm_Chr6g0264461 RchiOBHm_Chr6g0278601 RchiOBHm_Chr6g0299951 RchiOBHm_Chr7g0184971 RchiOBHm_Chr7g0185631 RchiOBHm_Chr7g0200601 RchiOBHm_Chr7g0206171 RchiOBHm_Chr7g0222341 RchiOBHm_Chr7g0237631
rosa_laevigata RLG00000012173 RLG00000021075
rosa_multiflora Rmu_co8065174.1_g000001 Rmu_co8074360.1_g000001 Rmu_co8095164.1_g000001 Rmu_co8204978.1_g000001 Rmu_co8329721.1_g000001 Rmu_co8347171.1_g000001 Rmu_co8395661.1_g000001 Rmu_co8466967.1_g000001 Rmu_sc0000030.1_g000008 Rmu_sc0000290.1_g000015 Rmu_sc0000294.1_g000012 Rmu_sc0000319.1_g000020 Rmu_sc0000418.1_g000014 Rmu_sc0000423.1_g000010 Rmu_sc0000427.1_g000013 Rmu_sc0000430.1_g000011 Rmu_sc0000487.1_g000037 Rmu_sc0000765.1_g000028 Rmu_sc0000770.1_g000037 Rmu_sc0000785.1_g000011 Rmu_sc0000811.1_g000011 Rmu_sc0000848.1_g000004 Rmu_sc0000897.1_g000007 Rmu_sc0000955.1_g000014 Rmu_sc0001004.1_g000019 Rmu_sc0001010.1_g000068 Rmu_sc0001021.1_g000008 Rmu_sc0001084.1_g000013 Rmu_sc0001111.1_g000002 Rmu_sc0001190.1_g000015 Rmu_sc0001308.1_g000013 Rmu_sc0001398.1_g000010 Rmu_sc0001680.1_g000005 Rmu_sc0001926.1_g000017 Rmu_sc0001942.1_g000074 Rmu_sc0002068.1_g000010 Rmu_sc0002113.1_g000019 Rmu_sc0002299.1_g000032 Rmu_sc0002531.1_g000026 Rmu_sc0002549.1_g000005 Rmu_sc0002634.1_g000001 Rmu_sc0002640.1_g000014 Rmu_sc0002831.1_g000005 Rmu_sc0002848.1_g000018 Rmu_sc0003005.1_g000027 Rmu_sc0003076.1_g000012 Rmu_sc0003124.1_g000001 Rmu_sc0003143.1_g000004 Rmu_sc0003143.1_g000005 Rmu_sc0003143.1_g000006 Rmu_sc0003302.1_g000009 Rmu_sc0003368.1_g000035 Rmu_sc0003462.1_g000001 Rmu_sc0003692.1_g000016 Rmu_sc0003855.1_g000007 Rmu_sc0003858.1_g000008 Rmu_sc0004277.1_g000031 Rmu_sc0004732.1_g000013 Rmu_sc0004748.1_g000005 Rmu_sc0005091.1_g000024 Rmu_sc0005124.1_g000001 Rmu_sc0005167.1_g000001 Rmu_sc0005242.1_g000003 Rmu_sc0005486.1_g000005 Rmu_sc0005597.1_g000008 Rmu_sc0005653.1_g000004 Rmu_sc0006080.1_g000016 Rmu_sc0006371.1_g000003 Rmu_sc0006415.1_g000001 Rmu_sc0006522.1_g000003 Rmu_sc0006596.1_g000007 Rmu_sc0006991.1_g000005 Rmu_sc0007070.1_g000004 Rmu_sc0007737.1_g000005 Rmu_sc0007856.1_g000001 Rmu_sc0008241.1_g000001 Rmu_sc0008393.1_g000006 Rmu_sc0008563.1_g000008 Rmu_sc0008904.1_g000006 Rmu_sc0010313.1_g000014 Rmu_sc0010693.1_g000002 Rmu_sc0010917.1_g000011 Rmu_sc0011232.1_g000003 Rmu_sc0011978.1_g000005 Rmu_sc0012782.1_g000003 Rmu_sc0013716.1_g000002 Rmu_sc0015429.1_g000002 Rmu_sc0015649.1_g000014 Rmu_sc0021955.1_g000004 Rmu_sc0024117.1_g000001 Rmu_sc0024816.1_g000001 Rmu_sc0024816.1_g000006 Rmu_sc0026593.1_g000003 Rmu_sc0028245.1_g000001 Rmu_sc0029783.1_g000006 Rmu_sc0030817.1_g000001 Rmu_sc0031096.1_g000001 Rmu_sc0034014.1_g000001 Rmu_sc0036569.1_g000001 Rmu_sc0039034.1_g000001 Rmu_ssc0000004.1_g000015 Rmu_ssc0000053.1_g000002 Rmu_ssc0000126.1_g000069 Rmu_ssc0000211.1_g000020 Rmu_ssc0000295.1_g000005 Rmu_ssc0000359.1_g000057 Rmu_ssc0000385.1_g000011 Rmu_ssc0000416.1_g000004 Rmu_ssc0000434.1_g000018
rosa_roxburghii Rroxscaffold_159G00432920 Rroxscaffold_2G00091500 Rroxscaffold_2G00123510 Rroxscaffold_2G00124730 Rroxscaffold_2G00126030 Rroxscaffold_2G00138160 Rroxscaffold_2G00153260 Rroxscaffold_3G00224470 Rroxscaffold_3G00244670 Rroxscaffold_3G00261920 Rroxscaffold_3G00264150 Rroxscaffold_3G00270420 Rroxscaffold_4G00285150 Rroxscaffold_4G00299830 Rroxscaffold_4G00311290 Rroxscaffold_4G00323970 Rroxscaffold_5G00374550 Rroxscaffold_6G00427060 Rroxscaffold_7G00169160 Rroxscaffold_7G00174970
rosa_rugosa Rorug01G0012500 Rorug01G0046200 Rorug01G0118800 Rorug01G0120200 Rorug01G0135400.1 Rorug01G0174200 Rorug01G0204600 Rorug01G0253500 Rorug01G0290500 Rorug01G0290800 Rorug01G0312100 Rorug01G0333700 Rorug01G0339600 Rorug01G0377800 Rorug01G0400400 Rorug01G0402200 Rorug01G0410700 Rorug01G0431400 Rorug02G0011900 Rorug02G0012500 Rorug02G0022300 Rorug02G0062400 Rorug02G0085300 Rorug02G0091800 Rorug02G0104500 Rorug02G0125400 Rorug02G0131000 Rorug02G0147300 Rorug02G0171000 Rorug02G0181500 Rorug02G0196900 Rorug02G0207200 Rorug02G0226600 Rorug02G0241300 Rorug02G0274300 Rorug02G0280600 Rorug02G0280800 Rorug02G0304600 Rorug02G0304700 Rorug02G0338800 Rorug02G0375800 Rorug02G0379300 Rorug02G0379400 Rorug02G0447600 Rorug02G0459900 Rorug02G0467200 Rorug02G0535400 Rorug03G0072300 Rorug03G0218900 Rorug03G0223700 Rorug03G0231500 Rorug03G0257200 Rorug03G0257300 Rorug03G0257400 Rorug03G0265700 Rorug03G0290200 Rorug03G0291300 Rorug03G0311000 Rorug03G0326900 Rorug03G0332700 Rorug03G0352000 Rorug03G0369700.1 Rorug04G0014000 Rorug04G0014500 Rorug04G0124100 Rorug04G0142100 Rorug04G0151400 Rorug04G0160700 Rorug04G0186400 Rorug04G0227600 Rorug04G0253800 Rorug04G0274400 Rorug04G0274600 Rorug04G0295600 Rorug04G0302000 Rorug04G0320600 Rorug04G0331300 Rorug04G0352200 Rorug04G0407000 Rorug04G0430300 Rorug04G0443000 Rorug04G0446400 Rorug04G0459000 Rorug05G0042400 Rorug05G0042500 Rorug05G0064900 Rorug05G0074300 Rorug05G0097700 Rorug05G0102300 Rorug05G0102300 Rorug05G0123700 Rorug05G0145800 Rorug05G0152900 Rorug05G0175900 Rorug05G0182100 Rorug05G0196000 Rorug05G0207000 Rorug05G0212800 Rorug05G0226400 Rorug05G0241500 Rorug05G0264800.1 Rorug05G0269600 Rorug05G0298200 Rorug05G0304300 Rorug05G0344300 Rorug05G0382300 Rorug05G0392300.1 Rorug05G0427900 Rorug05G0433500 Rorug05G0452700 Rorug05G0464600 Rorug05G0475800 Rorug05G0488600 Rorug05G0493000 Rorug05G0504800 Rorug05G0505500.1 Rorug05G0508400 Rorug05G0545800 Rorug05G0587000 Rorug05G0591100.1 Rorug06G0013200 Rorug06G0037700 Rorug06G0098200 Rorug06G0184500 Rorug06G0185300 Rorug06G0188200 Rorug06G0208300 Rorug06G0212900 Rorug06G0251500 Rorug06G0328000 Rorug06G0366100 Rorug06G0367400 Rorug06G0371200 Rorug06G0393500 Rorug06G0423000 Rorug06G0440500 Rorug06G0445400 Rorug06G0451700 Rorug06G0479400 Rorug06G0479500 Rorug06G0479600 Rorug06G0479700 Rorug06G0479800 Rorug06G0483100 Rorug07G0001200 Rorug07G0005200 Rorug07G0068600 Rorug07G0109300 Rorug07G0115500 Rorug07G0117000 Rorug07G0123500 Rorug07G0128000 Rorug07G0128100 Rorug07G0225500 Rorug07G0280200 Rorug07G0317300
rosa_samantha Rh1AG251400 Rh1BG133300 Rh1CG079900 Rh1CG235600 Rh1DG168000 Rh2AG533100 Rh2BG546900 Rh2CG517000 Rh2DG237900 Rh2DG555900 Rh3CG293400 Rh4AG419800 Rh4BG306300 Rh4CG446100 Rh5AG268900 Rh5AG282600 Rh5BG006600 Rh5BG345700 Rh5CG468100 Rh6CG190700 Rh6DG111900 Rh7BG172200 Rh7BG412200
rosa_wichuraiana Rw0G003620 Rw0G004000 Rw0G011770 Rw0G019070 Rw0G020070 Rw1G002990 Rw1G003550 Rw1G003860 Rw1G005930 Rw1G018430 Rw1G021160 Rw1G023820 Rw1G032700 Rw1G035790 Rw1G036160 Rw1G038660 Rw1G039380 Rw2G016120 Rw2G018680 Rw2G026860 Rw2G028670 Rw2G040870 Rw2G041040 Rw2G041410 Rw2G044140 Rw2G047570 Rw3G019760 Rw4G031020 Rw5G003700 Rw5G004830 Rw5G037470 Rw5G047400 Rw6G020150 Rw6G024010 Rw6G026600 Rw7G002480 Rw7G004430 Rw7G011870 Rw7G035520 Rw7G041260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 218
AccB7I CCANNNNNTGG 2 cut(s) 434, 1088
AccBSI CCGCTC 1 cut(s) 115
AccII CGCG 3 cut(s) 89, 857, 984
AciI CCGC 6 cut(s) 14, 89, 113, 219, 681, 984
AclWI GGATC 2 cut(s) 262, 811
AcoI YGGCCR 3 cut(s) 90, 282, 747
AcsI RAATTY 1 cut(s) 612
AcuI CTGAAG 1 cut(s) 852
AcyI GRCGYC 1 cut(s) 215
AdeI CACNNNGTG 1 cut(s) 40
AfaI GTAC 2 cut(s) 192, 379
AfiI CCNNNNNNNGG 3 cut(s) 434, 796, 1088
AgsI TTSAA 2 cut(s) 206, 518
AjuI GAANNNNNNNTTGG 2 cut(s) 556, 588
AleI CACNNNNGTG 1 cut(s) 496
AluBI AGCT 7 cut(s) 46, 227, 552, 729, 783, 994, 1079
AluI AGCT 7 cut(s) 46, 227, 552, 729, 783, 994, 1079
Alw21I GWGCWC 3 cut(s) 36, 57, 657
Alw26I GTCTC 3 cut(s) 11, 206, 537
Alw44I GTGCAC 1 cut(s) 53
AlwI GGATC 2 cut(s) 262, 811
AlwNI CAGNNNCTG 2 cut(s) 786, 826
AoxI GGCC 5 cut(s) 90, 135, 282, 747, 954
ApaLI GTGCAC 1 cut(s) 53
ApeKI GCWGC 6 cut(s) 124, 362, 726, 872, 991, 1037
ApoI RAATTY 1 cut(s) 612
AspLEI GCGC 1 cut(s) 89
AspS9I GGNCC 1 cut(s) 1148
AsuHPI GGTGA 2 cut(s) 57, 145
AvaII GGWCC 1 cut(s) 1148
BaeGI GKGCMC 1 cut(s) 57
BaeI ACNNNNGTAYC 2 cut(s) 253, 286
BalI TGGCCA 1 cut(s) 284
BanII GRGCYC 1 cut(s) 475
BauI CACGAG 1 cut(s) 35
Bbv12I GWGCWC 3 cut(s) 36, 57, 657
BbvI GCAGC 6 cut(s) 136, 349, 738, 884, 1003, 1024
BccI CCATC 4 cut(s) 76, 293, 305, 1090
BceAI ACGGC 1 cut(s) 77
BcgI CGANNNNNNTGC 2 cut(s) 51, 85
BciVI GTATCC 1 cut(s) 178
BclI TGATCA 1 cut(s) 817
BcoDI GTCTC 3 cut(s) 11, 206, 537
BfuI GTATCC 1 cut(s) 178
BisI GCNGC 7 cut(s) 90, 125, 363, 727, 873, 992, 1038
BlsI GCNGC 7 cut(s) 91, 126, 364, 728, 874, 993, 1039
Bme18I GGWCC 1 cut(s) 1148
BmgT120I GGNCC 1 cut(s) 1148
BmiI GGNNCC 1 cut(s) 1150
BmsI GCATC 2 cut(s) 71, 821
BpuEI CTTGAG 3 cut(s) 377, 914, 1016
BsaHI GRCGYC 1 cut(s) 215
BsaI GGTCTC 1 cut(s) 11
BsaWI WCCGGW 1 cut(s) 266
Bsc4I CCNNNNNNNGG 3 cut(s) 434, 796, 1088
Bse118I RCCGGY 2 cut(s) 749, 1004
Bse1I ACTGG 3 cut(s) 21, 484, 775
BseGI GGATG 4 cut(s) 82, 761, 1082, 1109
BseLI CCNNNNNNNGG 3 cut(s) 434, 796, 1088
BseMII CTCAG 2 cut(s) 401, 548
BseNI ACTGG 3 cut(s) 21, 484, 775
BseRI GAGGAG 1 cut(s) 714
BseSI GKGCMC 1 cut(s) 57
BseX3I CGGCCG 1 cut(s) 90
BseXI GCAGC 6 cut(s) 136, 349, 738, 884, 1003, 1024
Bsh1236I CGCG 3 cut(s) 89, 857, 984
Bsh1285I CGRYCG 1 cut(s) 93
BshFI GGCC 5 cut(s) 92, 137, 284, 749, 956
BsiEI CGRYCG 1 cut(s) 93
BsiHKAI GWGCWC 3 cut(s) 36, 57, 657
BsiSI CCGG 4 cut(s) 128, 267, 750, 1005
BslI CCNNNNNNNGG 3 cut(s) 434, 796, 1088
BsmAI GTCTC 3 cut(s) 11, 206, 537
BsmBI CGTCTC 1 cut(s) 206
BsmI GAATGC 2 cut(s) 513, 919
BsnI GGCC 5 cut(s) 92, 137, 284, 749, 956
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 4 cut(s) 36, 57, 475, 657
Bsp143I GATC 4 cut(s) 48, 254, 803, 817
Bsp68I TCGCGA 1 cut(s) 857
BspACI CCGC 6 cut(s) 14, 89, 113, 219, 681, 984
BspANI GGCC 5 cut(s) 92, 137, 284, 749, 956
BspCNI CTCAG 2 cut(s) 402, 547
BspFNI CGCG 3 cut(s) 89, 857, 984
BspLI GGNNCC 1 cut(s) 1150
BspPI GGATC 2 cut(s) 262, 811
BspQI GCTCTTC 1 cut(s) 662
BspTNI GGTCTC 1 cut(s) 11
BsrBI CCGCTC 1 cut(s) 115
BsrFI RCCGGY 2 cut(s) 749, 1004
BsrI ACTGG 3 cut(s) 21, 484, 775
BssAI RCCGGY 2 cut(s) 749, 1004
BssMI GATC 4 cut(s) 48, 254, 803, 817
BssNI GRCGYC 1 cut(s) 215
BssSI CACGAG 1 cut(s) 35
Bst2BI CACGAG 1 cut(s) 35
Bst4CI ACNGT 5 cut(s) 83, 190, 828, 835, 1050
Bst6I CTCTTC 1 cut(s) 662
BstACI GRCGYC 1 cut(s) 215
BstC8I GCNNGC 3 cut(s) 441, 637, 982
BstDEI CTNAG 3 cut(s) 180, 410, 534
BstENI CCTNNNNNAGG 1 cut(s) 794
BstF5I GGATG 4 cut(s) 82, 761, 1082, 1109
BstFNI CGCG 3 cut(s) 89, 857, 984
BstHHI GCGC 1 cut(s) 89
BstKTI GATC 4 cut(s) 51, 257, 806, 820
BstMAI GTCTC 3 cut(s) 11, 206, 537
BstMBI GATC 4 cut(s) 48, 254, 803, 817
BstMCI CGRYCG 1 cut(s) 93
BstMWI GCNNNNNNNGC 7 cut(s) 52, 95, 121, 746, 863, 872, 962
BstNSI RCATGY 1 cut(s) 639
BstSLI GKGCMC 1 cut(s) 57
BstUI CGCG 3 cut(s) 89, 857, 984
BstV1I GCAGC 6 cut(s) 136, 349, 738, 884, 1003, 1024
BstZI CGGCCG 1 cut(s) 90
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 5 cut(s) 92, 137, 284, 749, 956
BtsCI GGATG 4 cut(s) 82, 761, 1082, 1109
BtsIMutI CAGTG 3 cut(s) 28, 491, 824
BtuMI TCGCGA 1 cut(s) 857
Cac8I GCNNGC 3 cut(s) 441, 637, 982
CaiI CAGNNNCTG 2 cut(s) 786, 826
CfoI GCGC 1 cut(s) 89
Cfr10I RCCGGY 2 cut(s) 749, 1004
Cfr13I GGNCC 1 cut(s) 1148
CseI GACGC 2 cut(s) 68, 130
Csp6I GTAC 2 cut(s) 191, 378
CviAII CATG 5 cut(s) 310, 599, 636, 1030, 1138
CviQI GTAC 2 cut(s) 191, 378
DdeI CTNAG 3 cut(s) 180, 410, 534
DpnI GATC 4 cut(s) 50, 256, 805, 819
DpnII GATC 4 cut(s) 48, 254, 803, 817
DraIII CACNNNGTG 1 cut(s) 40
EaeI YGGCCR 3 cut(s) 90, 282, 747
EagI CGGCCG 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 662
EarI CTCTTC 1 cut(s) 662
EciI GGCGGA 1 cut(s) 29
EclXI CGGCCG 1 cut(s) 90
Eco24I GRGCYC 1 cut(s) 475
Eco31I GGTCTC 1 cut(s) 11
Eco32I GATATC 1 cut(s) 485
Eco47I GGWCC 1 cut(s) 1148
Eco52I CGGCCG 1 cut(s) 90
Eco57I CTGAAG 1 cut(s) 852
EcoNI CCTNNNNNAGG 1 cut(s) 794
EcoRV GATATC 1 cut(s) 485
EcoT38I GRGCYC 1 cut(s) 475
Esp3I CGTCTC 1 cut(s) 206
FaeI CATG 5 cut(s) 313, 602, 639, 1033, 1141
FalI AAGNNNNNCTT 2 cut(s) 511, 543
FatI CATG 5 cut(s) 309, 598, 635, 1029, 1137
FauI CCCGC 1 cut(s) 120
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 7 cut(s) 90, 125, 363, 727, 873, 992, 1038
FokI GGATG 4 cut(s) 89, 748, 1069, 1116
FriOI GRGCYC 1 cut(s) 475
Fsp4HI GCNGC 7 cut(s) 90, 125, 363, 727, 873, 992, 1038
GlaI GCGC 1 cut(s) 88
GluI GCNGC 7 cut(s) 90, 125, 363, 727, 873, 992, 1038
HaeIII GGCC 5 cut(s) 92, 137, 284, 749, 956
HapII CCGG 4 cut(s) 128, 267, 750, 1005
HgaI GACGC 2 cut(s) 68, 130
HhaI GCGC 1 cut(s) 89
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 5 cut(s) 313, 602, 639, 1033, 1141
Hin6I GCGC 1 cut(s) 87
HinP1I GCGC 1 cut(s) 87
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HinfI GANTC 4 cut(s) 588, 777, 859, 937
HpaII CCGG 4 cut(s) 128, 267, 750, 1005
HphI GGTGA 2 cut(s) 57, 145
Hpy166II GTNNAC 7 cut(s) 55, 378, 422, 755, 831, 851, 888
Hpy188I TCNGA 3 cut(s) 619, 817, 1103
Hpy188III TCNNGA 4 cut(s) 118, 258, 468, 856
Hpy8I GTNNAC 7 cut(s) 55, 378, 422, 755, 831, 851, 888
Hpy99I CGWCG 4 cut(s) 10, 13, 62, 98
HpyAV CCTTC 1 cut(s) 127
HpyCH4III ACNGT 5 cut(s) 83, 190, 828, 835, 1050
HpyCH4IV ACGT 2 cut(s) 215, 621
HpyF10VI GCNNNNNNNGC 7 cut(s) 52, 95, 121, 746, 863, 872, 962
HpyF3I CTNAG 3 cut(s) 180, 410, 534
HpySE526I ACGT 2 cut(s) 215, 621
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 5 cut(s) 313, 602, 639, 1033, 1141
HspAI GCGC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 817
Kzo9I GATC 4 cut(s) 48, 254, 803, 817
LguI GCTCTTC 1 cut(s) 662
LmnI GCTCC 2 cut(s) 43, 1084
Lsp1109I GCAGC 6 cut(s) 136, 349, 738, 884, 1003, 1024
LweI GCATC 2 cut(s) 71, 821
MaeII ACGT 2 cut(s) 215, 621
MaeIII GTNAC 2 cut(s) 23, 1044
MalI GATC 4 cut(s) 50, 256, 805, 819
MbiI CCGCTC 1 cut(s) 115
MboI GATC 4 cut(s) 48, 254, 803, 817
MboII GAAGA 1 cut(s) 649
MhlI GDGCHC 4 cut(s) 36, 57, 475, 657
MlsI TGGCCA 1 cut(s) 284
MluCI AATT 4 cut(s) 230, 612, 876, 1095
MluNI TGGCCA 1 cut(s) 284
MlyI GAGTC 1 cut(s) 868
MmeI TCCRAC 1 cut(s) 604
MnlI CCTC 9 cut(s) 31, 167, 177, 352, 620, 692, 889, 961, 1027
Mox20I TGGCCA 1 cut(s) 284
MscI TGGCCA 1 cut(s) 284
MslI CAYNNNNRTG 3 cut(s) 403, 496, 1051
Msp20I TGGCCA 1 cut(s) 284
MspI CCGG 4 cut(s) 128, 267, 750, 1005
Mva1269I GAATGC 2 cut(s) 513, 919
MvnI CGCG 3 cut(s) 89, 857, 984
MwoI GCNNNNNNNGC 7 cut(s) 52, 95, 121, 746, 863, 872, 962
NdeII GATC 4 cut(s) 48, 254, 803, 817
NlaIII CATG 5 cut(s) 313, 602, 639, 1033, 1141
NlaIV GGNNCC 1 cut(s) 1150
NmuCI GTSAC 2 cut(s) 23, 1044
NruI TCGCGA 1 cut(s) 857
NspI RCATGY 1 cut(s) 639
OliI CACNNNNGTG 1 cut(s) 496
PaeI GCATGC 1 cut(s) 639
PciSI GCTCTTC 1 cut(s) 662
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PctI GAATGC 2 cut(s) 513, 919
PfeI GAWTC 3 cut(s) 588, 777, 937
PflMI CCANNNNNTGG 2 cut(s) 434, 1088
PkrI GCNGC 7 cut(s) 91, 126, 364, 728, 874, 993, 1039
PleI GAGTC 1 cut(s) 867
PpsI GAGTC 1 cut(s) 867
PspN4I GGNNCC 1 cut(s) 1150
PspPI GGNCC 1 cut(s) 1148
PstNI CAGNNNCTG 2 cut(s) 786, 826
RruI TCGCGA 1 cut(s) 857
RsaI GTAC 2 cut(s) 192, 379
RsaNI GTAC 2 cut(s) 191, 378
RseI CAYNNNNRTG 3 cut(s) 403, 496, 1051
SapI GCTCTTC 1 cut(s) 662
SatI GCNGC 7 cut(s) 90, 125, 363, 727, 873, 992, 1038
Sau3AI GATC 4 cut(s) 48, 254, 803, 817
Sau96I GGNCC 1 cut(s) 1148
SchI GAGTC 1 cut(s) 868
SduI GDGCHC 4 cut(s) 36, 57, 475, 657
SfaNI GCATC 2 cut(s) 71, 821
SinI GGWCC 1 cut(s) 1148
SmiMI CAYNNNNRTG 3 cut(s) 403, 496, 1051
SmlI CTYRAG 3 cut(s) 356, 893, 995
SmoI CTYRAG 3 cut(s) 356, 893, 995
SphI GCATGC 1 cut(s) 639
Sse9I AATT 4 cut(s) 230, 612, 876, 1095
SsiI CCGC 6 cut(s) 14, 89, 113, 219, 681, 984
SspI AATATT 1 cut(s) 148
TaaI ACNGT 5 cut(s) 83, 190, 828, 835, 1050
TaiI ACGT 2 cut(s) 218, 624
TaqI TCGA 4 cut(s) 169, 257, 667, 1093
TasI AATT 4 cut(s) 230, 612, 876, 1095
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 3 cut(s) 588, 777, 937
TscAI CASTG 3 cut(s) 28, 498, 831
TseFI GTSAC 2 cut(s) 23, 1044
TseI GCWGC 6 cut(s) 124, 362, 726, 872, 991, 1037
Tsp45I GTSAC 2 cut(s) 23, 1044
TspDTI ATGAA 6 cut(s) 493, 649, 750, 831, 1056, 1108
TspGWI ACGGA 3 cut(s) 42, 208, 224
TspRI CASTG 3 cut(s) 28, 498, 831
Van91I CCANNNNNTGG 2 cut(s) 434, 1088
VneI GTGCAC 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 1148
XagI CCTNNNNNAGG 1 cut(s) 794
XapI RAATTY 1 cut(s) 612
XceI RCATGY 1 cut(s) 639
ZraI GACGTC 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.