Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 20 |
| AccIII | TCCGGA | 1 cut(s) | 444 |
| AciI | CCGC | 1 cut(s) | 73 |
| AclWI | GGATC | 1 cut(s) | 126 |
| AcuI | CTGAAG | 3 cut(s) | 36, 248, 420 |
| AgsI | TTSAA | 2 cut(s) | 356, 462 |
| AjnI | CCWGG | 1 cut(s) | 486 |
| Alw21I | GWGCWC | 1 cut(s) | 301 |
| Alw44I | GTGCAC | 1 cut(s) | 297 |
| AlwI | GGATC | 1 cut(s) | 126 |
| Aor13HI | TCCGGA | 1 cut(s) | 444 |
| ApaLI | GTGCAC | 1 cut(s) | 297 |
| AseI | ATTAAT | 1 cut(s) | 192 |
| AspS9I | GGNCC | 1 cut(s) | 135 |
| AsuHPI | GGTGA | 1 cut(s) | 227 |
| AvaII | GGWCC | 1 cut(s) | 135 |
| BaeGI | GKGCMC | 2 cut(s) | 25, 301 |
| BanI | GGYRCC | 1 cut(s) | 20 |
| Bbv12I | GWGCWC | 1 cut(s) | 301 |
| BccI | CCATC | 2 cut(s) | 384, 473 |
| BciT130I | CCWGG | 1 cut(s) | 488 |
| BciVI | GTATCC | 1 cut(s) | 103 |
| BclI | TGATCA | 1 cut(s) | 157 |
| BfaI | CTAG | 1 cut(s) | 294 |
| BfuI | GTATCC | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 1 cut(s) | 488 |
| Bme18I | GGWCC | 1 cut(s) | 135 |
| BmgT120I | GGNCC | 1 cut(s) | 135 |
| BmiI | GGNNCC | 2 cut(s) | 22, 501 |
| BmrFI | CCNGG | 1 cut(s) | 488 |
| BmrI | ACTGGG | 1 cut(s) | 19 |
| BmuI | ACTGGG | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 1 cut(s) | 275 |
| BsaBI | GATNNNNATC | 2 cut(s) | 222, 394 |
| BsaWI | WCCGGW | 1 cut(s) | 444 |
| Bse1I | ACTGG | 2 cut(s) | 5, 25 |
| Bse3DI | GCAATG | 1 cut(s) | 273 |
| Bse8I | GATNNNNATC | 2 cut(s) | 222, 394 |
| BseAI | TCCGGA | 1 cut(s) | 444 |
| BseBI | CCWGG | 1 cut(s) | 488 |
| BseGI | GGATG | 1 cut(s) | 484 |
| BseJI | GATNNNNATC | 2 cut(s) | 222, 394 |
| BseMI | GCAATG | 1 cut(s) | 273 |
| BseMII | CTCAG | 1 cut(s) | 487 |
| BseNI | ACTGG | 2 cut(s) | 5, 25 |
| BseRI | GAGGAG | 1 cut(s) | 512 |
| BseSI | GKGCMC | 2 cut(s) | 25, 301 |
| Bsh1285I | CGRYCG | 1 cut(s) | 409 |
| BshNI | GGYRCC | 1 cut(s) | 20 |
| BsiEI | CGRYCG | 1 cut(s) | 409 |
| BsiHKAI | GWGCWC | 1 cut(s) | 301 |
| BsiSI | CCGG | 1 cut(s) | 445 |
| Bsp1286I | GDGCHC | 2 cut(s) | 25, 301 |
| Bsp13I | TCCGGA | 1 cut(s) | 444 |
| Bsp143I | GATC | 3 cut(s) | 118, 157, 406 |
| BspACI | CCGC | 1 cut(s) | 73 |
| BspCNI | CTCAG | 1 cut(s) | 486 |
| BspEI | TCCGGA | 1 cut(s) | 444 |
| BspLI | GGNNCC | 2 cut(s) | 22, 501 |
| BspPI | GGATC | 1 cut(s) | 126 |
| BspQI | GCTCTTC | 1 cut(s) | 267 |
| BspT107I | GGYRCC | 1 cut(s) | 20 |
| BsrDI | GCAATG | 1 cut(s) | 273 |
| BsrI | ACTGG | 2 cut(s) | 5, 25 |
| BssMI | GATC | 3 cut(s) | 118, 157, 406 |
| Bst2UI | CCWGG | 1 cut(s) | 488 |
| Bst6I | CTCTTC | 2 cut(s) | 40, 267 |
| BstDEI | CTNAG | 3 cut(s) | 186, 381, 473 |
| BstEII | GGTNACC | 1 cut(s) | 482 |
| BstF5I | GGATG | 1 cut(s) | 484 |
| BstKTI | GATC | 3 cut(s) | 121, 160, 409 |
| BstMBI | GATC | 3 cut(s) | 118, 157, 406 |
| BstMCI | CGRYCG | 1 cut(s) | 409 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 391 |
| BstNI | CCWGG | 1 cut(s) | 488 |
| BstPI | GGTNACC | 1 cut(s) | 482 |
| BstSCI | CCNGG | 1 cut(s) | 486 |
| BstSLI | GKGCMC | 2 cut(s) | 25, 301 |
| BsuI | GTATCC | 1 cut(s) | 103 |
| BtgZI | GCGATG | 1 cut(s) | 209 |
| BtsCI | GGATG | 1 cut(s) | 484 |
| BtsIMutI | CAGTG | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 1 cut(s) | 135 |
| CsiI | ACCWGGT | 1 cut(s) | 486 |
| CviAII | CATG | 2 cut(s) | 428, 521 |
| CviJI | RGCY | 5 cut(s) | 260, 329, 394, 452, 502 |
| CviKI_1 | RGCY | 5 cut(s) | 260, 329, 394, 452, 502 |
| DdeI | CTNAG | 3 cut(s) | 186, 381, 473 |
| DpnI | GATC | 3 cut(s) | 120, 159, 408 |
| DpnII | GATC | 3 cut(s) | 118, 157, 406 |
| DraI | TTTAAA | 1 cut(s) | 309 |
| Eam1104I | CTCTTC | 2 cut(s) | 40, 267 |
| EarI | CTCTTC | 2 cut(s) | 40, 267 |
| Eco47I | GGWCC | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 3 cut(s) | 36, 248, 420 |
| Eco91I | GGTNACC | 1 cut(s) | 482 |
| EcoO65I | GGTNACC | 1 cut(s) | 482 |
| EcoRII | CCWGG | 1 cut(s) | 486 |
| FaeI | CATG | 2 cut(s) | 431, 524 |
| FaiI | YATR | 6 cut(s) | 176, 347, 429, 434, 522, 537 |
| FatI | CATG | 2 cut(s) | 427, 520 |
| FbaI | TGATCA | 1 cut(s) | 157 |
| FokI | GGATG | 1 cut(s) | 491 |
| FspBI | CTAG | 1 cut(s) | 294 |
| HapII | CCGG | 1 cut(s) | 445 |
| Hin1II | CATG | 2 cut(s) | 431, 524 |
| HinfI | GANTC | 2 cut(s) | 341, 517 |
| HpaII | CCGG | 1 cut(s) | 445 |
| HphI | GGTGA | 1 cut(s) | 227 |
| Hpy166II | GTNNAC | 2 cut(s) | 30, 299 |
| Hpy188I | TCNGA | 3 cut(s) | 157, 400, 516 |
| Hpy188III | TCNNGA | 3 cut(s) | 254, 356, 445 |
| Hpy8I | GTNNAC | 2 cut(s) | 30, 299 |
| HpyAV | CCTTC | 3 cut(s) | 11, 362, 395 |
| HpyCH4V | TGCA | 4 cut(s) | 248, 299, 349, 438 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 391 |
| HpyF3I | CTNAG | 3 cut(s) | 186, 381, 473 |
| Hsp92II | CATG | 2 cut(s) | 431, 524 |
| Kpn2I | TCCGGA | 1 cut(s) | 444 |
| Ksp22I | TGATCA | 1 cut(s) | 157 |
| Kzo9I | GATC | 3 cut(s) | 118, 157, 406 |
| LguI | GCTCTTC | 1 cut(s) | 267 |
| LmnI | GCTCC | 1 cut(s) | 499 |
| LpnPI | CCDG | 9 cut(s) | 18, 38, 118, 270, 356, 458, 460, 473, 500 |
| MabI | ACCWGGT | 1 cut(s) | 486 |
| MaeI | CTAG | 1 cut(s) | 294 |
| MaeIII | GTNAC | 4 cut(s) | 146, 410, 482, 530 |
| MalI | GATC | 3 cut(s) | 120, 159, 408 |
| MboI | GATC | 3 cut(s) | 118, 157, 406 |
| MboII | GAAGA | 4 cut(s) | 57, 254, 450, 461 |
| MhlI | GDGCHC | 2 cut(s) | 25, 301 |
| MluCI | AATT | 4 cut(s) | 122, 199, 462, 553 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MnlI | CCTC | 5 cut(s) | 41, 50, 199, 250, 490 |
| MroI | TCCGGA | 1 cut(s) | 444 |
| MseI | TTAA | 2 cut(s) | 192, 308 |
| MspI | CCGG | 1 cut(s) | 445 |
| MspR9I | CCNGG | 1 cut(s) | 488 |
| MvaI | CCWGG | 1 cut(s) | 488 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 391 |
| NdeII | GATC | 3 cut(s) | 118, 157, 406 |
| NlaIII | CATG | 2 cut(s) | 431, 524 |
| NlaIV | GGNNCC | 2 cut(s) | 22, 501 |
| PciSI | GCTCTTC | 1 cut(s) | 267 |
| PfeI | GAWTC | 2 cut(s) | 341, 517 |
| Ple19I | CGATCG | 1 cut(s) | 409 |
| PshBI | ATTAAT | 1 cut(s) | 192 |
| Psp6I | CCWGG | 1 cut(s) | 486 |
| PspEI | GGTNACC | 1 cut(s) | 482 |
| PspGI | CCWGG | 1 cut(s) | 486 |
| PspN4I | GGNNCC | 2 cut(s) | 22, 501 |
| PspPI | GGNCC | 1 cut(s) | 135 |
| PvuI | CGATCG | 1 cut(s) | 409 |
| SapI | GCTCTTC | 1 cut(s) | 267 |
| SaqAI | TTAA | 2 cut(s) | 192, 308 |
| Sau3AI | GATC | 3 cut(s) | 118, 157, 406 |
| Sau96I | GGNCC | 1 cut(s) | 135 |
| ScrFI | CCNGG | 1 cut(s) | 488 |
| SduI | GDGCHC | 2 cut(s) | 25, 301 |
| SetI | ASST | 8 cut(s) | 22, 61, 140, 145, 210, 246, 354, 492 |
| SexAI | ACCWGGT | 1 cut(s) | 486 |
| SinI | GGWCC | 1 cut(s) | 135 |
| SmlI | CTYRAG | 1 cut(s) | 254 |
| SmoI | CTYRAG | 1 cut(s) | 254 |
| Sse9I | AATT | 4 cut(s) | 122, 199, 462, 553 |
| SsiI | CCGC | 1 cut(s) | 73 |
| SspMI | CTAG | 1 cut(s) | 294 |
| StyD4I | CCNGG | 1 cut(s) | 486 |
| TaqI | TCGA | 1 cut(s) | 495 |
| TasI | AATT | 4 cut(s) | 122, 199, 462, 553 |
| TfiI | GAWTC | 2 cut(s) | 341, 517 |
| Tru1I | TTAA | 2 cut(s) | 192, 308 |
| Tru9I | TTAA | 2 cut(s) | 192, 308 |
| TscAI | CASTG | 1 cut(s) | 12 |
| TspDTI | ATGAA | 3 cut(s) | 212, 416, 455 |
| TspRI | CASTG | 1 cut(s) | 12 |
| VneI | GTGCAC | 1 cut(s) | 297 |
| VpaK11BI | GGWCC | 1 cut(s) | 135 |
| VspI | ATTAAT | 1 cut(s) | 192 |
| XspI | CTAG | 1 cut(s) | 294 |