ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 144 |
| AciI | CCGC | 4 cut(s) | 44, 60, 96, 216 |
| AclWI | GGATC | 3 cut(s) | 617, 662, 675 |
| AcsI | RAATTY | 3 cut(s) | 298, 519, 767 |
| AcuI | CTGAAG | 2 cut(s) | 45, 584 |
| AcyI | GRCGYC | 1 cut(s) | 93 |
| AfaI | GTAC | 1 cut(s) | 695 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 144 |
| AgsI | TTSAA | 2 cut(s) | 497, 518 |
| AjnI | CCWGG | 1 cut(s) | 143 |
| AleI | CACNNNNGTG | 1 cut(s) | 755 |
| AluBI | AGCT | 8 cut(s) | 17, 55, 116, 133, 155, 224, 413, 832 |
| AluI | AGCT | 8 cut(s) | 17, 55, 116, 133, 155, 224, 413, 832 |
| AlwI | GGATC | 3 cut(s) | 617, 662, 675 |
| AoxI | GGCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 6 cut(s) | 116, 236, 332, 413, 485, 716 |
| ApoI | RAATTY | 3 cut(s) | 298, 519, 767 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 1 cut(s) | 772 |
| AsuII | TTCGAA | 1 cut(s) | 33 |
| BamHI | GGATCC | 1 cut(s) | 667 |
| BbsI | GAAGAC | 2 cut(s) | 96, 806 |
| BbvI | GCAGC | 6 cut(s) | 103, 223, 319, 400, 472, 703 |
| BceAI | ACGGC | 1 cut(s) | 554 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 98, 132, 525, 559 |
| BciT130I | CCWGG | 1 cut(s) | 145 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 75 |
| BisI | GCNGC | 8 cut(s) | 96, 117, 216, 237, 333, 414, 486, 717 |
| BlsI | GCNGC | 8 cut(s) | 97, 118, 217, 238, 334, 415, 487, 718 |
| Bme1390I | CCNGG | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 3 cut(s) | 68, 79, 669 |
| BmrFI | CCNGG | 1 cut(s) | 145 |
| BmsI | GCATC | 1 cut(s) | 223 |
| BpiI | GAAGAC | 2 cut(s) | 96, 806 |
| BpmI | CTGGAG | 1 cut(s) | 177 |
| Bpu10I | CCTNAGC | 1 cut(s) | 18 |
| Bpu14I | TTCGAA | 1 cut(s) | 33 |
| BsaBI | GATNNNNATC | 1 cut(s) | 666 |
| BsaHI | GRCGYC | 1 cut(s) | 93 |
| BsaJI | CCNNGG | 2 cut(s) | 144, 840 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 612, 642 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 144 |
| Bse1I | ACTGG | 2 cut(s) | 457, 792 |
| Bse3DI | GCAATG | 2 cut(s) | 241, 646 |
| Bse8I | GATNNNNATC | 1 cut(s) | 666 |
| BseBI | CCWGG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 2 cut(s) | 144, 840 |
| BseJI | GATNNNNATC | 1 cut(s) | 666 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseMI | GCAATG | 2 cut(s) | 241, 646 |
| BseMII | CTCAG | 3 cut(s) | 189, 503, 693 |
| BseNI | ACTGG | 2 cut(s) | 457, 792 |
| BseXI | GCAGC | 6 cut(s) | 103, 223, 319, 400, 472, 703 |
| BseYI | CCCAGC | 1 cut(s) | 596 |
| BsgI | GTGCAG | 1 cut(s) | 222 |
| BshFI | GGCC | 1 cut(s) | 69 |
| BslFI | GGGAC | 1 cut(s) | 161 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BsmFI | GGGAC | 1 cut(s) | 161 |
| BsnI | GGCC | 1 cut(s) | 69 |
| Bsp119I | TTCGAA | 1 cut(s) | 33 |
| Bsp143I | GATC | 4 cut(s) | 7, 622, 667, 859 |
| BspACI | CCGC | 4 cut(s) | 44, 60, 96, 216 |
| BspANI | GGCC | 1 cut(s) | 69 |
| BspCNI | CTCAG | 3 cut(s) | 190, 502, 692 |
| BspLI | GGNNCC | 3 cut(s) | 68, 79, 669 |
| BspPI | GGATC | 3 cut(s) | 617, 662, 675 |
| BspT104I | TTCGAA | 1 cut(s) | 33 |
| BsrDI | GCAATG | 2 cut(s) | 241, 646 |
| BsrI | ACTGG | 2 cut(s) | 457, 792 |
| BssECI | CCNNGG | 2 cut(s) | 144, 840 |
| BssMI | GATC | 4 cut(s) | 7, 622, 667, 859 |
| BssNI | GRCGYC | 1 cut(s) | 93 |
| BssT1I | CCWWGG | 1 cut(s) | 840 |
| Bst2UI | CCWGG | 1 cut(s) | 145 |
| Bst4CI | ACNGT | 2 cut(s) | 185, 813 |
| Bst6I | CTCTTC | 2 cut(s) | 77, 110 |
| BstACI | GRCGYC | 1 cut(s) | 93 |
| BstBI | TTCGAA | 1 cut(s) | 33 |
| BstC8I | GCNNGC | 2 cut(s) | 135, 464 |
| BstDEI | CTNAG | 6 cut(s) | 18, 198, 283, 489, 679, 744 |
| BstKTI | GATC | 4 cut(s) | 10, 625, 670, 862 |
| BstMBI | GATC | 4 cut(s) | 7, 622, 667, 859 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 66, 75, 221, 482, 612 |
| BstNI | CCWGG | 1 cut(s) | 145 |
| BstSCI | CCNGG | 1 cut(s) | 143 |
| BstV1I | GCAGC | 6 cut(s) | 103, 223, 319, 400, 472, 703 |
| BstV2I | GAAGAC | 2 cut(s) | 96, 806 |
| BstX2I | RGATCY | 2 cut(s) | 622, 667 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 847 |
| BstYI | RGATCY | 2 cut(s) | 622, 667 |
| BsuRI | GGCC | 1 cut(s) | 69 |
| BtsIMutI | CAGTG | 3 cut(s) | 464, 750, 785 |
| Cac8I | GCNNGC | 2 cut(s) | 135, 464 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CseI | GACGC | 1 cut(s) | 101 |
| Csp6I | GTAC | 1 cut(s) | 694 |
| CviAII | CATG | 2 cut(s) | 209, 778 |
| CviQI | GTAC | 1 cut(s) | 694 |
| DdeI | CTNAG | 6 cut(s) | 18, 198, 283, 489, 679, 744 |
| DpnI | GATC | 4 cut(s) | 9, 624, 669, 861 |
| DpnII | GATC | 4 cut(s) | 7, 622, 667, 859 |
| DraI | TTTAAA | 2 cut(s) | 192, 705 |
| Eam1104I | CTCTTC | 2 cut(s) | 77, 110 |
| EarI | CTCTTC | 2 cut(s) | 77, 110 |
| Eco130I | CCWWGG | 1 cut(s) | 840 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 584 |
| EcoO109I | RGGNCCY | 1 cut(s) | 67 |
| EcoRII | CCWGG | 1 cut(s) | 143 |
| EcoT14I | CCWWGG | 1 cut(s) | 840 |
| EcoT22I | ATGCAT | 1 cut(s) | 646 |
| ErhI | CCWWGG | 1 cut(s) | 840 |
| FaeI | CATG | 2 cut(s) | 212, 781 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 570, 602, 791, 823 |
| FaqI | GGGAC | 1 cut(s) | 161 |
| FatI | CATG | 2 cut(s) | 208, 777 |
| FauNDI | CATATG | 1 cut(s) | 166 |
| Fnu4HI | GCNGC | 8 cut(s) | 96, 117, 216, 237, 333, 414, 486, 717 |
| Fsp4HI | GCNGC | 8 cut(s) | 96, 117, 216, 237, 333, 414, 486, 717 |
| GluI | GCNGC | 8 cut(s) | 96, 117, 216, 237, 333, 414, 486, 717 |
| GsaI | CCCAGC | 1 cut(s) | 600 |
| GsuI | CTGGAG | 1 cut(s) | 177 |
| HaeIII | GGCC | 1 cut(s) | 69 |
| HgaI | GACGC | 1 cut(s) | 101 |
| Hin1I | GRCGYC | 1 cut(s) | 93 |
| Hin1II | CATG | 2 cut(s) | 212, 781 |
| HinfI | GANTC | 3 cut(s) | 269, 368, 791 |
| HphI | GGTGA | 1 cut(s) | 772 |
| Hpy166II | GTNNAC | 1 cut(s) | 750 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 373, 492, 864 |
| Hpy188III | TCNNGA | 1 cut(s) | 681 |
| Hpy8I | GTNNAC | 1 cut(s) | 750 |
| HpyAV | CCTTC | 4 cut(s) | 312, 382, 757, 817 |
| HpyCH4III | ACNGT | 2 cut(s) | 185, 813 |
| HpyCH4V | TGCA | 7 cut(s) | 239, 335, 462, 536, 615, 632, 644 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 66, 75, 221, 482, 612 |
| HpyF3I | CTNAG | 6 cut(s) | 18, 198, 283, 489, 679, 744 |
| Hsp92I | GRCGYC | 1 cut(s) | 93 |
| Hsp92II | CATG | 2 cut(s) | 212, 781 |
| Kzo9I | GATC | 4 cut(s) | 7, 622, 667, 859 |
| LmnI | GCTCC | 2 cut(s) | 83, 158 |
| LpnPI | CCDG | 9 cut(s) | 130, 141, 157, 275, 470, 582, 639, 666, 773 |
| Lsp1109I | GCAGC | 6 cut(s) | 103, 223, 319, 400, 472, 703 |
| LweI | GCATC | 1 cut(s) | 223 |
| MaeIII | GTNAC | 1 cut(s) | 439 |
| MalI | GATC | 4 cut(s) | 9, 624, 669, 861 |
| MboI | GATC | 4 cut(s) | 7, 622, 667, 859 |
| MflI | RGATCY | 2 cut(s) | 622, 667 |
| MluCI | AATT | 7 cut(s) | 121, 298, 351, 479, 519, 531, 767 |
| MlyI | GAGTC | 1 cut(s) | 278 |
| MmeI | TCCRAC | 2 cut(s) | 695, 828 |
| MnlI | CCTC | 4 cut(s) | 80, 520, 652, 844 |
| Mph1103I | ATGCAT | 1 cut(s) | 646 |
| MseI | TTAA | 4 cut(s) | 191, 324, 591, 704 |
| MslI | CAYNNNNRTG | 1 cut(s) | 755 |
| MspA1I | CMGCKG | 1 cut(s) | 98 |
| MspR9I | CCNGG | 1 cut(s) | 145 |
| MvaI | CCWGG | 1 cut(s) | 145 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 66, 75, 221, 482, 612 |
| NdeI | CATATG | 1 cut(s) | 166 |
| NdeII | GATC | 4 cut(s) | 7, 622, 667, 859 |
| NlaIII | CATG | 2 cut(s) | 212, 781 |
| NlaIV | GGNNCC | 3 cut(s) | 68, 79, 669 |
| NmeAIII | GCCGAG | 2 cut(s) | 36, 382 |
| NsiI | ATGCAT | 1 cut(s) | 646 |
| NspV | TTCGAA | 1 cut(s) | 33 |
| OliI | CACNNNNGTG | 1 cut(s) | 755 |
| PfeI | GAWTC | 2 cut(s) | 368, 791 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 144 |
| PkrI | GCNGC | 8 cut(s) | 97, 118, 217, 238, 334, 415, 487, 718 |
| PleI | GAGTC | 1 cut(s) | 277 |
| PpsI | GAGTC | 1 cut(s) | 277 |
| Psp6I | CCWGG | 1 cut(s) | 143 |
| PspFI | CCCAGC | 1 cut(s) | 596 |
| PspGI | CCWGG | 1 cut(s) | 143 |
| PspN4I | GGNNCC | 3 cut(s) | 68, 79, 669 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PsuI | RGATCY | 2 cut(s) | 622, 667 |
| RsaI | GTAC | 1 cut(s) | 695 |
| RsaNI | GTAC | 1 cut(s) | 694 |
| RseI | CAYNNNNRTG | 1 cut(s) | 755 |
| SaqAI | TTAA | 4 cut(s) | 191, 324, 591, 704 |
| SatI | GCNGC | 8 cut(s) | 96, 117, 216, 237, 333, 414, 486, 717 |
| Sau3AI | GATC | 4 cut(s) | 7, 622, 667, 859 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SchI | GAGTC | 1 cut(s) | 278 |
| ScrFI | CCNGG | 1 cut(s) | 145 |
| SfaNI | GCATC | 1 cut(s) | 223 |
| SfuI | TTCGAA | 1 cut(s) | 33 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 755 |
| Sse9I | AATT | 7 cut(s) | 121, 298, 351, 479, 519, 531, 767 |
| SsiI | CCGC | 4 cut(s) | 44, 60, 96, 216 |
| StyD4I | CCNGG | 1 cut(s) | 143 |
| StyI | CCWWGG | 1 cut(s) | 840 |
| TaaI | ACNGT | 2 cut(s) | 185, 813 |
| TaqI | TCGA | 2 cut(s) | 33, 108 |
| TasI | AATT | 7 cut(s) | 121, 298, 351, 479, 519, 531, 767 |
| TatI | WGTACW | 1 cut(s) | 693 |
| TauI | GCSGC | 2 cut(s) | 98, 218 |
| TfiI | GAWTC | 2 cut(s) | 368, 791 |
| Tru1I | TTAA | 4 cut(s) | 191, 324, 591, 704 |
| Tru9I | TTAA | 4 cut(s) | 191, 324, 591, 704 |
| TscAI | CASTG | 3 cut(s) | 464, 757, 792 |
| TseI | GCWGC | 6 cut(s) | 116, 236, 332, 413, 485, 716 |
| TspDTI | ATGAA | 5 cut(s) | 225, 381, 420, 447, 744 |
| TspRI | CASTG | 3 cut(s) | 464, 757, 792 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 144 |
| XapI | RAATTY | 3 cut(s) | 298, 519, 767 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 792 |
| Zsp2I | ATGCAT | 1 cut(s) | 646 |