Rw4G031020

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000031
Physical Location & Seq
Forward (+)
57839456 .. 57843586
4131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G031020.1

Sequence Viewer

Length: 4131 bp
ATGAAGTTACTTTACTGGAATATTCGGGGCATAGGTAACAGTGACTCACGCTCTGAATTATCTAACATCTGTCGTATTCATACACCGGACTTGGTCTGTATCTCTGAACTTATGGTTTCTTTTGCTTCTGTACTTGTGTCTTATTGGGTTTCGTTAAATCTTAACTTGATTTCTTTTAATTCCCGGGTTGAGTCAGCCCCGAATATTTGGCTGCTTGGCAAGGGACATATTGACTACTCTGTGATTTCTATGTCAGCTCAACAAGGTACAATCCAAGCTACCTTTGAAGGGGTGTTGTCCCAGTTTACTTTGGTGTATGCTGCTACAACGACTTTAGGCCGTAAATCCCTATGGCAGGAGCTGCTGGCTCTTCGTCAAACTACTACTGTACCTTGGATGGTAATCGGTGATTTTAATTCTATTTTAGGAGCTCATGAGTCCACAGGAGGAGGTTTGCCTCATCGCATTTCTTGTGAGGATTTTCGCAGTGTCACAGAATTATGTGGTCTCACTCACTTGGACACTGCAGGTTCTTTTTTCACTTGGTCAAGAACTTGGTTCAATGGTCGGTTGGAACGCAGGCTTGACCGGTCTTTATGTGATGATCAGTGGTTAAGCTCTTGGTCTTTCTCTTCATGTACAGCCCTGCCAAGGGTGGTGTCTGATCATAATTGTCTCATCTTTTCAGCTACCAACTCACTTTCGGATGGTCCCAAGCCTTTTCGATTTCAGTCTATGTGGACCCTTCATCACACTTTTAAAGAGCTTGTGGCAAATTGTTGGAAACATACTGAAGTTTGTGGTTGTCCTATGTTTGTTACAATGCAAAAATTAAAAGCTTTAAAGGCTTCCTTACGGATGTGGAATAAACGAGTCTTTGGGGATGTTCATCGTAATCTTCACGGTGCTCGTCTTGCTCTTTCTGATATTCAACATGAAATTGCCACATCTGGTATTACTTTACAACTGTCTGCGATGGAGGTTGCTGCTAAACAAGCTGTTCTGGAAGCTATGCGGCATCAGGAGTACTTTTGGAGGGATCGTGCCCGTGTCAAGTGGTTAACTGAAGGTGATAGGTGCACTTCATTTTTTCATGCTTATGCTCAGGTTAAGCGTACTAGATCTCGCATTAATACTTTAATGGATGGGGATGACGTACTCACTGATTCAGCCGCTGTCTCTAGTCACATAGTGCAATTCTACAGGTCTTTGTACAATTCTGGTGCTTCAAGTGTCAGTTCATTCACTATTTGTGAGGTTATTCCTTCCTTGGTTTCTGATGATGAAAATATCTCTTTAACAAAATTGTCTTCCATGGAAGAAATTCGGGATGCAGTCTTCTCTATGGACCCGTCAAGTGCGCCTGGGCCGGATGGTTTTCCAGGCTTCTTCTTTCAGCACTGTTGGGATATTGTTGGGGAGGATGTTGTTGCTTTTGTGCAATATTTCTTTCGTCATAACTGGTTGCTTCCCAATGTGAATTCAAATTTTATAGTTCTTATTCCCAAGGTTGATGGAGCTAACACAATTTCTCAATATCGGCCAATCGCTTTAGCTAATTTTCTTTTTAAGATTATTCCGAAGATTCTAGCAATGCGGCTGGCTCCAATAGTTTCTCGGATTATTTCTCCTGAACAATCGGCTTTCATTAAGGGACGCCGAATCTCCGACTGCATTGGTATGGTCTCTGAGGGGTTCAATCTTCTTGAGAAAAAGATACGTGGTGGGAATGTTGGGATAAAGGTTGATATTGCTAAAGCTTTTGACACTCTTAGTTGGCCTTTTCTTTTCCAAGTGCTTCATGAGTTTGGTTTCTCTCAGTCTTTTGTGGATTGGGTCCGAACAATATTGCACTCTGCTCGGCTTTCTGTGCTTATTAATGGGTCTCCTCATGGTTTTTTCTCTTGTGATCGTGGTGTTCGTCAAGGGGATCCTCTTTCTCCTATTCTTTTTTGTTTAGCGGAAGAGGTTTTAAGCCGGGGGCTTGCCAATTTGTTTTCTGCTAGGCGTATTCGTTCTATTTCTACTCCAAGGGGTTGCTCTACAATTTCTCATGTCCTCTATGCAGATGACCTATTTATTTTTTGCAGAGGTGCTGGCTCTTCTCTTCATTGTCTCCAACAGTTTCTTACTCTTTACGGTGAAGCATCAGGGCAACTAATTAATAAGAACAAGAGCACTTTCTACTTGGGTACTCCTTATCTGCATCGTCAGCGTTATTTCAAGCGGTTATTGGGGTTCAAGAGAGGTGTGACCCCATTCACCTATTTGGGAGTACCAATTTTTCGTGGTAAGCCTCGACGTATTCATCTCCAAGCCTTGGCGGATAAGGCTACATCTAAGCTTGCTGGTTGGAAAGGAAAGCTTTTATCTATGGCAGGCAGGGTACAACTTGTTCAATCAGTGTTTCAAAGCATGCTTCTTCATACTTTCACAGTGTATATTTGGCCTTCCTCTCTTATAAAGCATTTGGCTGTCTGTGCTCGGAATTTTATTTGGTCAGGAGACCTGGCGATACGAAAGATGGTTACTGTACCTTGGAGTCAGGTTTGTACTCCTAAGATTGAGGGGGGGCTCGGCTTACGAGACCCTAAGGCTCTTAACCAAGCAGCGCTCCTTCGGTTTAGCTGGGGAACTCTCACCTCAGCCTCTTCTTGGGGTCTCTTTGCTCGGCGCCGTTTTTTCGTTTCGCGGTTTATGAGATTAAAGTTTTTTACTTCTTCAATCTGGCATGGTTTGAAAGTTTCTCTCCCTTTAATATATCAGAACTCCAGATGGCTTATTGGCAATGGTTCTATGGTGAATTTCTGGTCGGATAAATGGTTGGATGTTCCAATCTTAGAGGAGTTGCAACGTGTTTCACTTTCTCGGCAACTGCATGCTCTTGTCTCTGACTTTATTGTTAACCAGCAATGGTCTTTGCCAGCTCGGTTTTACTCTCTGTATCCACATATTGCACAAAAGATCCACAACATTACTCTTCCCCTTCAAGCTGAAAGTGATTGTCTCATTTGGGAACACTCCAGTTCTGGGGTCCCTTCTTTTTCTGATGGTTATGAGTTGGTTCGTCAGAAGTTCAATAAAAAAAGTTGGGCTACTAGCATTTGGAAATCTTTTATTCCTTCCCGGTATTCCTTATTAGCTTGGAGGATTTTCTATGATAGGTTACCCACGGATTTGCAGCTCCAGCGTCATGGGGTTACCCTTGTTTCGAAATGTCCCTTATGCTCTTTGGGGTGTGTGGAAGATTCAGTGCATCTGTTTTTCAATTGCTCATTTGCTCAACATATTTGGCAGTGGTTAGCTTGTTGTTTTGGCACTTCTTTGCCTTCTCAAGGGTCGCTTGATGACTTCTGGATTGCTTTTATTGGTAAGCGATTCTCTTCTCAATTAGCTAATGTTTGGTTAGCAGCGGGTCTTTTTACTCTGATGCAGATTTCGAAGGTGCGGAACAAGCTGGTCTTTGATAATAAGCAGCCCTCTCTCTGGCGTGTTCTTTGTTCAATTAAATCTTGGGTTCGTTTTGTGGCACCCTACTTTCTAGGTAGTTCGACAGGATTACTGGATGTAAATATTCTTAAGGAATTTGGAGTTCAGCCCATTATTCAACAGGTGTGCATCCCTCGTATGGTTAGGTGGCTTTCTCTGACTCATTCCTGGATTAAGCTCAATACTGATGGCCTTGCTAAAGGGAATCCTGGGGCGGCGGCATGTGGTGGCATATTTAGAATTTCTAGTGGGCGTTATGTTGGAGGCTACTGTCAGAACTTGGGTTTCCAGAATGCTTTTTATTCGGAGTTAATGGCAGTGATTATTGGAGTGGAGTTTGCTTATCAGTTTGGTTGGCATACTCTCTGGTTAGAGTGTGATTCTATGGGTGTGATTGAAGGGTTGAGGTCTTCTACCTTCAAGCCCCCTTGGCCTCTGCGTGTTCATTGGCACAATTGCTTATCTCGTCTTAATTCGATGCAATTTTATTGCAGTCATATTCATAGGGAAGGCAATTCAGTGGCAGATTGCTTGGCGAATTTGGGATTGGCATTTCCTTCTCTTTGCTGGCTCCCTACGCCTCCAATGGAGATTTTTTCTAAGCTTCGTAATGATGCCTTAGGAGTCCTCCATTATCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

1376

Amino Acids

155.75

Weight (kDa)

9.39

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 4 - 223 1.8e-09 Endonuclease/Exonuclease/phosphatase family
RVT_1 PF00078 501 - 761 8.4e-34 Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT PF13966 1016 - 1098 5.9e-20 zinc-binding in reverse transcriptase
RVT_3 PF13456 1224 - 1344 3.6e-17 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000031)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G05755
fragaria_vesca FvH4_1g13571 FvH4_2g06951 FvH4_2g09612 FvH4_3g24991 FvH4_3g39131 FvH4_4g01331 FvH4_5g11071 FvH4_5g22144 FvH4_5g22144 FvH4_5g27541 FvH4_5g38601 FvH4_6g09211 FvH4_6g17161 FvH4_6g30101 FvH4_6g30102 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g42420 FvH4_6g51131 FvH4_7g28851
malus_domestica MD02G1021900.v1.1 MD02G1050700.v1.1 MD02G1314000.v1.1 MD05G1244100.v1.1 MD07G1021300.v1.1 MD09G1113200.v1.1 MD09G1113300.v1.1 MD13G1019000.v1.1 MD17G1103400.v1.1
prunus_persica Prupe.1G484600_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.3G211200_v2.0.a1 Prupe.4G283800_v2.0.a1
pyrus_communis pycom01g13080 pycom03g05530 pycom05g09360 pycom05g20240 pycom06g06350 pycom06g14660 pycom09g03750 pycom13g22930 pycom14g00800 pycom15g35930 pycom17g09770 pycom17g25010
rosa_chinensis RchiOBHm_Chr1g0316991 RchiOBHm_Chr1g0321411 RchiOBHm_Chr1g0341061 RchiOBHm_Chr1g0352021 RchiOBHm_Chr1g0357231 RchiOBHm_Chr1g0361641 RchiOBHm_Chr1g0379151 RchiOBHm_Chr2g0084861 RchiOBHm_Chr2g0092021 RchiOBHm_Chr2g0102721 RchiOBHm_Chr2g0119161 RchiOBHm_Chr2g0120021 RchiOBHm_Chr2g0120031 RchiOBHm_Chr2g0120451 RchiOBHm_Chr2g0129631 RchiOBHm_Chr2g0133661 RchiOBHm_Chr2g0140031 RchiOBHm_Chr2g0154361 RchiOBHm_Chr2g0158311 RchiOBHm_Chr2g0160431 RchiOBHm_Chr2g0167951 RchiOBHm_Chr2g0168801 RchiOBHm_Chr3g0451531 RchiOBHm_Chr3g0453641 RchiOBHm_Chr3g0453831 RchiOBHm_Chr3g0455401 RchiOBHm_Chr3g0457461 RchiOBHm_Chr3g0459251 RchiOBHm_Chr3g0462451 RchiOBHm_Chr3g0465511 RchiOBHm_Chr3g0466111 RchiOBHm_Chr3g0469201 RchiOBHm_Chr3g0472791 RchiOBHm_Chr3g0472841 RchiOBHm_Chr4g0391691 RchiOBHm_Chr4g0393351 RchiOBHm_Chr4g0395061 RchiOBHm_Chr4g0395191 RchiOBHm_Chr4g0397541 RchiOBHm_Chr4g0402261 RchiOBHm_Chr4g0409421 RchiOBHm_Chr4g0417481 RchiOBHm_Chr4g0428291 RchiOBHm_Chr4g0434281 RchiOBHm_Chr4g0437231 RchiOBHm_Chr4g0439261 RchiOBHm_Chr5g0000531 RchiOBHm_Chr5g0016091 RchiOBHm_Chr5g0018801 RchiOBHm_Chr5g0026401 RchiOBHm_Chr5g0051821 RchiOBHm_Chr5g0062261 RchiOBHm_Chr5g0070711 RchiOBHm_Chr5g0074731 RchiOBHm_Chr5g0077831 RchiOBHm_Chr6g0251621 RchiOBHm_Chr6g0253181 RchiOBHm_Chr6g0258241 RchiOBHm_Chr6g0259301 RchiOBHm_Chr6g0263381 RchiOBHm_Chr6g0264461 RchiOBHm_Chr6g0278601 RchiOBHm_Chr6g0299951 RchiOBHm_Chr7g0184971 RchiOBHm_Chr7g0185631 RchiOBHm_Chr7g0200601 RchiOBHm_Chr7g0206171 RchiOBHm_Chr7g0222341 RchiOBHm_Chr7g0237631
rosa_laevigata RLG00000012173 RLG00000021075
rosa_multiflora Rmu_co8065174.1_g000001 Rmu_co8074360.1_g000001 Rmu_co8095164.1_g000001 Rmu_co8204978.1_g000001 Rmu_co8329721.1_g000001 Rmu_co8347171.1_g000001 Rmu_co8395661.1_g000001 Rmu_co8466967.1_g000001 Rmu_sc0000030.1_g000008 Rmu_sc0000290.1_g000015 Rmu_sc0000294.1_g000012 Rmu_sc0000319.1_g000020 Rmu_sc0000418.1_g000014 Rmu_sc0000423.1_g000010 Rmu_sc0000427.1_g000013 Rmu_sc0000430.1_g000011 Rmu_sc0000487.1_g000037 Rmu_sc0000765.1_g000028 Rmu_sc0000770.1_g000037 Rmu_sc0000785.1_g000011 Rmu_sc0000811.1_g000011 Rmu_sc0000848.1_g000004 Rmu_sc0000897.1_g000007 Rmu_sc0000955.1_g000014 Rmu_sc0001004.1_g000019 Rmu_sc0001010.1_g000068 Rmu_sc0001021.1_g000008 Rmu_sc0001084.1_g000013 Rmu_sc0001111.1_g000002 Rmu_sc0001190.1_g000015 Rmu_sc0001308.1_g000013 Rmu_sc0001398.1_g000010 Rmu_sc0001680.1_g000005 Rmu_sc0001926.1_g000017 Rmu_sc0001942.1_g000074 Rmu_sc0002068.1_g000010 Rmu_sc0002113.1_g000019 Rmu_sc0002299.1_g000032 Rmu_sc0002531.1_g000026 Rmu_sc0002549.1_g000005 Rmu_sc0002634.1_g000001 Rmu_sc0002640.1_g000014 Rmu_sc0002831.1_g000005 Rmu_sc0002848.1_g000018 Rmu_sc0003005.1_g000027 Rmu_sc0003076.1_g000012 Rmu_sc0003124.1_g000001 Rmu_sc0003143.1_g000004 Rmu_sc0003143.1_g000005 Rmu_sc0003143.1_g000006 Rmu_sc0003302.1_g000009 Rmu_sc0003368.1_g000035 Rmu_sc0003462.1_g000001 Rmu_sc0003692.1_g000016 Rmu_sc0003855.1_g000007 Rmu_sc0003858.1_g000008 Rmu_sc0004277.1_g000031 Rmu_sc0004732.1_g000013 Rmu_sc0004748.1_g000005 Rmu_sc0005091.1_g000024 Rmu_sc0005124.1_g000001 Rmu_sc0005167.1_g000001 Rmu_sc0005242.1_g000003 Rmu_sc0005486.1_g000005 Rmu_sc0005597.1_g000008 Rmu_sc0005653.1_g000004 Rmu_sc0006080.1_g000016 Rmu_sc0006371.1_g000003 Rmu_sc0006415.1_g000001 Rmu_sc0006522.1_g000003 Rmu_sc0006596.1_g000007 Rmu_sc0006991.1_g000005 Rmu_sc0007070.1_g000004 Rmu_sc0007737.1_g000005 Rmu_sc0007856.1_g000001 Rmu_sc0008241.1_g000001 Rmu_sc0008393.1_g000006 Rmu_sc0008563.1_g000008 Rmu_sc0008904.1_g000006 Rmu_sc0010313.1_g000014 Rmu_sc0010693.1_g000002 Rmu_sc0010917.1_g000011 Rmu_sc0011232.1_g000003 Rmu_sc0011978.1_g000005 Rmu_sc0012782.1_g000003 Rmu_sc0013716.1_g000002 Rmu_sc0015429.1_g000002 Rmu_sc0015649.1_g000014 Rmu_sc0021955.1_g000004 Rmu_sc0024117.1_g000001 Rmu_sc0024816.1_g000001 Rmu_sc0024816.1_g000006 Rmu_sc0026593.1_g000003 Rmu_sc0028245.1_g000001 Rmu_sc0029783.1_g000006 Rmu_sc0030817.1_g000001 Rmu_sc0031096.1_g000001 Rmu_sc0034014.1_g000001 Rmu_sc0036569.1_g000001 Rmu_sc0039034.1_g000001 Rmu_ssc0000004.1_g000015 Rmu_ssc0000053.1_g000002 Rmu_ssc0000126.1_g000069 Rmu_ssc0000211.1_g000020 Rmu_ssc0000295.1_g000005 Rmu_ssc0000359.1_g000057 Rmu_ssc0000385.1_g000011 Rmu_ssc0000416.1_g000004 Rmu_ssc0000434.1_g000018
rosa_roxburghii Rroxscaffold_159G00432920 Rroxscaffold_2G00091500 Rroxscaffold_2G00123510 Rroxscaffold_2G00124730 Rroxscaffold_2G00126030 Rroxscaffold_2G00138160 Rroxscaffold_2G00153260 Rroxscaffold_3G00224470 Rroxscaffold_3G00244670 Rroxscaffold_3G00261920 Rroxscaffold_3G00264150 Rroxscaffold_3G00270420 Rroxscaffold_4G00285150 Rroxscaffold_4G00299830 Rroxscaffold_4G00311290 Rroxscaffold_4G00323970 Rroxscaffold_5G00374550 Rroxscaffold_6G00427060 Rroxscaffold_7G00169160 Rroxscaffold_7G00174970
rosa_rugosa Rorug01G0012500 Rorug01G0046200 Rorug01G0118800 Rorug01G0120200 Rorug01G0135400.1 Rorug01G0174200 Rorug01G0204600 Rorug01G0253500 Rorug01G0290500 Rorug01G0290800 Rorug01G0312100 Rorug01G0333700 Rorug01G0339600 Rorug01G0377800 Rorug01G0400400 Rorug01G0402200 Rorug01G0410700 Rorug01G0431400 Rorug02G0011900 Rorug02G0012500 Rorug02G0022300 Rorug02G0062400 Rorug02G0085300 Rorug02G0091800 Rorug02G0104500 Rorug02G0125400 Rorug02G0131000 Rorug02G0147300 Rorug02G0171000 Rorug02G0181500 Rorug02G0196900 Rorug02G0207200 Rorug02G0226600 Rorug02G0241300 Rorug02G0274300 Rorug02G0280600 Rorug02G0280800 Rorug02G0304600 Rorug02G0304700 Rorug02G0338800 Rorug02G0375800 Rorug02G0379300 Rorug02G0379400 Rorug02G0447600 Rorug02G0459900 Rorug02G0467200 Rorug02G0535400 Rorug03G0072300 Rorug03G0218900 Rorug03G0223700 Rorug03G0231500 Rorug03G0257200 Rorug03G0257300 Rorug03G0257400 Rorug03G0265700 Rorug03G0290200 Rorug03G0291300 Rorug03G0311000 Rorug03G0326900 Rorug03G0332700 Rorug03G0352000 Rorug03G0369700.1 Rorug04G0014000 Rorug04G0014500 Rorug04G0124100 Rorug04G0142100 Rorug04G0151400 Rorug04G0160700 Rorug04G0186400 Rorug04G0227600 Rorug04G0253800 Rorug04G0274400 Rorug04G0274600 Rorug04G0295600 Rorug04G0302000 Rorug04G0320600 Rorug04G0331300 Rorug04G0352200 Rorug04G0407000 Rorug04G0430300 Rorug04G0443000 Rorug04G0446400 Rorug04G0459000 Rorug05G0042400 Rorug05G0042500 Rorug05G0064900 Rorug05G0074300 Rorug05G0097700 Rorug05G0102300 Rorug05G0102300 Rorug05G0123700 Rorug05G0145800 Rorug05G0152900 Rorug05G0175900 Rorug05G0182100 Rorug05G0196000 Rorug05G0207000 Rorug05G0212800 Rorug05G0226400 Rorug05G0241500 Rorug05G0264800.1 Rorug05G0269600 Rorug05G0298200 Rorug05G0304300 Rorug05G0344300 Rorug05G0382300 Rorug05G0392300.1 Rorug05G0427900 Rorug05G0433500 Rorug05G0452700 Rorug05G0464600 Rorug05G0475800 Rorug05G0488600 Rorug05G0493000 Rorug05G0504800 Rorug05G0505500.1 Rorug05G0508400 Rorug05G0545800 Rorug05G0587000 Rorug05G0591100.1 Rorug06G0013200 Rorug06G0037700 Rorug06G0098200 Rorug06G0184500 Rorug06G0185300 Rorug06G0188200 Rorug06G0208300 Rorug06G0212900 Rorug06G0251500 Rorug06G0328000 Rorug06G0366100 Rorug06G0367400 Rorug06G0371200 Rorug06G0393500 Rorug06G0423000 Rorug06G0440500 Rorug06G0445400 Rorug06G0451700 Rorug06G0479400 Rorug06G0479500 Rorug06G0479600 Rorug06G0479700 Rorug06G0479800 Rorug06G0483100 Rorug07G0001200 Rorug07G0005200 Rorug07G0068600 Rorug07G0109300 Rorug07G0115500 Rorug07G0117000 Rorug07G0123500 Rorug07G0128000 Rorug07G0128100 Rorug07G0225500 Rorug07G0280200 Rorug07G0317300
rosa_samantha Rh1AG251400 Rh1BG133300 Rh1CG079900 Rh1CG235600 Rh1DG168000 Rh2AG533100 Rh2BG546900 Rh2CG517000 Rh2DG237900 Rh2DG555900 Rh3CG293400 Rh4AG419800 Rh4BG306300 Rh4CG446100 Rh5AG268900 Rh5AG282600 Rh5BG006600 Rh5BG345700 Rh5CG468100 Rh6CG190700 Rh6DG111900 Rh7BG172200 Rh7BG412200
rosa_wichuraiana Rw0G003620 Rw0G004000 Rw0G011770 Rw0G019070 Rw0G020070 Rw1G002990 Rw1G003550 Rw1G003860 Rw1G005930 Rw1G018430 Rw1G021160 Rw1G023820 Rw1G032700 Rw1G035790 Rw1G036160 Rw1G038660 Rw1G039380 Rw2G016120 Rw2G018680 Rw2G026860 Rw2G028670 Rw2G040870 Rw2G041040 Rw2G041410 Rw2G044140 Rw2G047570 Rw3G019760 Rw4G031020 Rw5G003700 Rw5G004830 Rw5G037470 Rw5G047400 Rw6G020150 Rw6G024010 Rw6G026600 Rw7G002480 Rw7G004430 Rw7G011870 Rw7G035520 Rw7G041260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2462
Acc36I ACCTGC 1 cut(s) 518
AccB1I GGYRCC 2 cut(s) 2673, 3529
AccB7I CCANNNNNTGG 1 cut(s) 2320
AccII CGCG 1 cut(s) 2692
AclWI GGATC 4 cut(s) 1047, 1925, 1938, 2959
AcoI YGGCCR 1 cut(s) 1541
AcsI RAATTY 8 cut(s) 1323, 1480, 1486, 2488, 2803, 3584, 3729, 4027
AcuI CTGAAG 2 cut(s) 813, 1086
AcyI GRCGYC 2 cut(s) 1657, 2674
AdeI CACNNNGTG 1 cut(s) 1192
AfeI AGCGCT 1 cut(s) 2613
AflII CTTAAG 1 cut(s) 3578
AflIII ACRYGT 1 cut(s) 2854
AgeI ACCGGT 1 cut(s) 588
AjnI CCWGG 5 cut(s) 1363, 1381, 2508, 3656, 3697
AjuI GAANNNNNNNTTGG 2 cut(s) 4019, 4051
Alw21I GWGCWC 5 cut(s) 433, 910, 1082, 2180, 2485
Alw44I GTGCAC 1 cut(s) 1078
AlwI GGATC 4 cut(s) 1047, 1925, 1938, 2959
AlwNI CAGNNNCTG 2 cut(s) 361, 1175
Ama87I CYCGRG 1 cut(s) 183
Aor51HI AGCGCT 1 cut(s) 2613
AoxI GGCC 7 cut(s) 337, 1367, 1541, 1778, 2447, 3679, 3920
ApaLI GTGCAC 1 cut(s) 1078
ApeKI GCWGC 8 cut(s) 211, 320, 361, 986, 2609, 3181, 3410, 3475
ApoI RAATTY 8 cut(s) 1323, 1480, 1486, 2488, 2803, 3584, 3729, 4027
AseI ATTAAT 3 cut(s) 1131, 1878, 2163
AsiGI ACCGGT 1 cut(s) 588
Asp700I GAANNNNTTC 1 cut(s) 1323
AspLEI GCGC 3 cut(s) 1363, 2614, 2676
AspS9I GGNCC 6 cut(s) 710, 741, 1348, 1367, 1837, 3034
AsuC2I CCSGG 4 cut(s) 184, 185, 1979, 3127
AsuHPI GGTGA 6 cut(s) 419, 1082, 2153, 2254, 2632, 2812
AsuII TTCGAA 2 cut(s) 3212, 3440
AvaI CYCGRG 1 cut(s) 183
AvaII GGWCC 5 cut(s) 710, 741, 1348, 1837, 3034
AxyI CCTNAGG 2 cut(s) 2592, 4108
BaeGI GKGCMC 2 cut(s) 1048, 1082
BaeI ACNNNNGTAYC 2 cut(s) 372, 405
BamHI GGATCC 1 cut(s) 1930
BanI GGYRCC 2 cut(s) 2673, 3529
BanII GRGCYC 2 cut(s) 433, 2577
BarI GAAGNNNNNNTAC 1 cut(s) 28
BbsI GAAGAC 3 cut(s) 1302, 1330, 3891
Bbv12I GWGCWC 5 cut(s) 433, 910, 1082, 2180, 2485
BbvCI CCTCAGC 1 cut(s) 2644
BbvI GCAGC 8 cut(s) 198, 307, 348, 973, 2621, 3193, 3422, 3487
BceAI ACGGC 2 cut(s) 324, 2661
BcgI CGANNNNNNTGC 2 cut(s) 1841, 1875
BciT130I CCWGG 5 cut(s) 1365, 1383, 2510, 3658, 3699
BciVI GTATCC 1 cut(s) 2955
BclI TGATCA 2 cut(s) 604, 664
BcnI CCSGG 4 cut(s) 184, 185, 1979, 3127
BfaI CTAG 7 cut(s) 1119, 1182, 1589, 2004, 3099, 3542, 3735
BfmI CTRYAG 2 cut(s) 525, 1201
BfoI RGCGCY 2 cut(s) 2615, 2677
BfrI CTTAAG 1 cut(s) 3578
BfuAI ACCTGC 1 cut(s) 518
BfuI GTATCC 1 cut(s) 2955
BglI GCCNNNNNGGC 1 cut(s) 3919
BglII AGATCT 1 cut(s) 1121
BmcAI AGTACT 1 cut(s) 1028
Bme1390I CCNGG 9 cut(s) 184, 185, 1365, 1383, 1979, 2510, 3127, 3658, 3699
Bme18I GGWCC 5 cut(s) 710, 741, 1348, 1837, 3034
BmeT110I CYCGRG 1 cut(s) 183
BmgT120I GGNCC 6 cut(s) 710, 741, 1348, 1367, 1837, 3034
BmrFI CCNGG 9 cut(s) 184, 185, 1365, 1383, 1979, 2510, 3127, 3658, 3699
BmrI ACTGGG 1 cut(s) 295
BmsI GCATC 9 cut(s) 1027, 1321, 2156, 2215, 3265, 3420, 3627, 3957, 4093
BmuI ACTGGG 1 cut(s) 295
BpiI GAAGAC 3 cut(s) 1302, 1330, 3891
BpmI CTGGAG 3 cut(s) 2755, 3007, 3170
Bpu10I CCTNAGC 2 cut(s) 1104, 2644
Bpu14I TTCGAA 2 cut(s) 3212, 3440
BpuEI CTTGAG 2 cut(s) 1727, 3318
BpuMI CCSGG 4 cut(s) 184, 185, 1979, 3127
BsaAI YACGTR 1 cut(s) 1721
BsaBI GATNNNNATC 2 cut(s) 401, 888
BsaHI GRCGYC 2 cut(s) 1657, 2674
BsaI GGTCTC 6 cut(s) 512, 1690, 1890, 2499, 2580, 2666
BsaWI WCCGGW 2 cut(s) 85, 588
BsaXI ACNNNNNCTCC 2 cut(s) 1027, 1057
Bse118I RCCGGY 1 cut(s) 588
Bse1I ACTGG 5 cut(s) 20, 301, 1466, 3024, 3567
Bse21I CCTNAGG 2 cut(s) 2592, 4108
Bse3DI GCAATG 3 cut(s) 1599, 2794, 2918
Bse8I GATNNNNATC 2 cut(s) 401, 888
BseBI CCWGG 5 cut(s) 1365, 1383, 2510, 3658, 3699
BseJI GATNNNNATC 2 cut(s) 401, 888
BseMI GCAATG 3 cut(s) 1599, 2794, 2918
BseMII CTCAG 4 cut(s) 1118, 1680, 1832, 2658
BseNI ACTGG 5 cut(s) 20, 301, 1466, 3024, 3567
BseRI GAGGAG 3 cut(s) 462, 1878, 2858
BseSI GKGCMC 2 cut(s) 1048, 1082
BseXI GCAGC 8 cut(s) 198, 307, 348, 973, 2621, 3193, 3422, 3487
BseYI CCCAGC 1 cut(s) 2628
Bsh1236I CGCG 1 cut(s) 2692
BshFI GGCC 7 cut(s) 339, 1369, 1543, 1780, 2449, 3681, 3922
BshNI GGYRCC 2 cut(s) 2673, 3529
BshTI ACCGGT 1 cut(s) 588
BsiHKAI GWGCWC 5 cut(s) 433, 910, 1082, 2180, 2485
BsiHKCI CYCGRG 1 cut(s) 183
BsiSI CCGG 6 cut(s) 86, 184, 589, 1370, 1978, 3127
BslFI GGGAC 6 cut(s) 237, 283, 696, 1668, 3020, 3204
BsmFI GGGAC 6 cut(s) 237, 283, 696, 1668, 3020, 3204
BsmI GAATGC 1 cut(s) 3787
BsnI GGCC 7 cut(s) 339, 1369, 1543, 1780, 2449, 3681, 3922
Bso31I GGTCTC 6 cut(s) 512, 1690, 1890, 2499, 2580, 2666
BsoBI CYCGRG 1 cut(s) 183
Bsp119I TTCGAA 2 cut(s) 3212, 3440
Bsp1286I GDGCHC 7 cut(s) 433, 910, 1048, 1082, 2180, 2485, 2577
Bsp1407I TGTACA 2 cut(s) 638, 1212
Bsp143I GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
Bsp19I CCATGG 1 cut(s) 1314
BspANI GGCC 7 cut(s) 339, 1369, 1543, 1780, 2449, 3681, 3922
BspCNI CTCAG 4 cut(s) 1117, 1681, 1831, 2657
BspFNI CGCG 1 cut(s) 2692
BspHI TCATGA 2 cut(s) 433, 1801
BspMAI CTGCAG 1 cut(s) 529
BspMI ACCTGC 1 cut(s) 518
BspPI GGATC 4 cut(s) 1047, 1925, 1938, 2959
BspQI GCTCTTC 2 cut(s) 375, 2107
BspT104I TTCGAA 2 cut(s) 3212, 3440
BspT107I GGYRCC 2 cut(s) 2673, 3529
BspTI CTTAAG 1 cut(s) 3578
BspTNI GGTCTC 6 cut(s) 512, 1690, 1890, 2499, 2580, 2666
BsrDI GCAATG 3 cut(s) 1599, 2794, 2918
BsrFI RCCGGY 1 cut(s) 588
BsrGI TGTACA 2 cut(s) 638, 1212
BsrI ACTGG 5 cut(s) 20, 301, 1466, 3024, 3567
BssAI RCCGGY 1 cut(s) 588
BssMI GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
BssNI GRCGYC 2 cut(s) 1657, 2674
BssT1I CCWWGG 9 cut(s) 392, 650, 1269, 1314, 1506, 2030, 2319, 2537, 3917
Bst2UI CCWGG 5 cut(s) 1365, 1383, 2510, 3658, 3699
Bst6I CTCTTC 8 cut(s) 375, 637, 1959, 2107, 2112, 2656, 2985, 3388
BstACI GRCGYC 2 cut(s) 1657, 2674
BstAFI CTTAAG 1 cut(s) 3578
BstAPI GCANNNNNTGC 1 cut(s) 361
BstAUI TGTACA 2 cut(s) 638, 1212
BstBAI YACGTR 1 cut(s) 1721
BstBI TTCGAA 2 cut(s) 3212, 3440
BstDSI CCRYGG 2 cut(s) 1314, 3171
BstEII GGTNACC 2 cut(s) 3165, 3199
BstENI CCTNNNNNAGG 2 cut(s) 353, 3333
BstFNI CGCG 1 cut(s) 2692
BstH2I RGCGCY 2 cut(s) 2615, 2677
BstHHI GCGC 3 cut(s) 1363, 2614, 2676
BstKTI GATC 7 cut(s) 607, 667, 1042, 1124, 1912, 1933, 2967
BstMBI GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
BstNI CCWGG 5 cut(s) 1365, 1383, 2510, 3658, 3699
BstNSI RCATGY 3 cut(s) 2419, 2882, 3714
BstPI GGTNACC 2 cut(s) 3165, 3199
BstSCI CCNGG 9 cut(s) 182, 183, 1363, 1381, 1977, 2508, 3125, 3656, 3697
BstSFI CTRYAG 2 cut(s) 525, 1201
BstSLI GKGCMC 2 cut(s) 1048, 1082
BstUI CGCG 1 cut(s) 2692
BstV1I GCAGC 8 cut(s) 198, 307, 348, 973, 2621, 3193, 3422, 3487
BstV2I GAAGAC 3 cut(s) 1302, 1330, 3891
BstX2I RGATCY 3 cut(s) 1121, 1930, 2964
BstXI CCANNNNNNTGG 1 cut(s) 3194
BstYI RGATCY 3 cut(s) 1121, 1930, 2964
Bsu36I CCTNAGG 2 cut(s) 2592, 4108
BsuI GTATCC 1 cut(s) 2955
BsuRI GGCC 7 cut(s) 339, 1369, 1543, 1780, 2449, 3681, 3922
BtgI CCRYGG 2 cut(s) 1314, 3171
BtgZI GCGATG 2 cut(s) 446, 989
BtsI GCAGTG 4 cut(s) 493, 522, 3302, 3813
BveI ACCTGC 1 cut(s) 518
CaiI CAGNNNCTG 2 cut(s) 361, 1175
CciI TCATGA 2 cut(s) 433, 1801
CfoI GCGC 3 cut(s) 1363, 2614, 2676
Cfr10I RCCGGY 1 cut(s) 588
Cfr13I GGNCC 6 cut(s) 710, 741, 1348, 1367, 1837, 3034
Cfr9I CCCGGG 1 cut(s) 183
CseI GACGC 2 cut(s) 1665, 3179
CspAI ACCGGT 1 cut(s) 588
DinI GGCGCC 1 cut(s) 2675
DpnI GATC 7 cut(s) 606, 666, 1041, 1123, 1911, 1932, 2966
DpnII GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
DraI TTTAAA 2 cut(s) 760, 843
DraIII CACNNNGTG 1 cut(s) 1192
EaeI YGGCCR 1 cut(s) 1541
Eam1104I CTCTTC 8 cut(s) 375, 637, 1959, 2107, 2112, 2656, 2985, 3388
EarI CTCTTC 8 cut(s) 375, 637, 1959, 2107, 2112, 2656, 2985, 3388
EciI GGCGGA 1 cut(s) 2339
Ecl136II GAGCTC 1 cut(s) 431
Eco130I CCWWGG 9 cut(s) 392, 650, 1269, 1314, 1506, 2030, 2319, 2537, 3917
Eco24I GRGCYC 2 cut(s) 433, 2577
Eco31I GGTCTC 6 cut(s) 512, 1690, 1890, 2499, 2580, 2666
Eco47I GGWCC 5 cut(s) 710, 741, 1348, 1837, 3034
Eco47III AGCGCT 1 cut(s) 2613
Eco53kI GAGCTC 1 cut(s) 431
Eco57I CTGAAG 2 cut(s) 813, 1086
Eco81I CCTNAGG 2 cut(s) 2592, 4108
Eco88I CYCGRG 1 cut(s) 183
Eco91I GGTNACC 2 cut(s) 3165, 3199
EcoICRI GAGCTC 1 cut(s) 431
EcoNI CCTNNNNNAGG 2 cut(s) 353, 3333
EcoO109I RGGNCCY 1 cut(s) 3034
EcoO65I GGTNACC 2 cut(s) 3165, 3199
EcoRI GAATTC 1 cut(s) 1480
EcoRII CCWGG 5 cut(s) 1363, 1381, 2508, 3656, 3697
EcoT14I CCWWGG 9 cut(s) 392, 650, 1269, 1314, 1506, 2030, 2319, 2537, 3917
EcoT38I GRGCYC 2 cut(s) 433, 2577
EgeI GGCGCC 1 cut(s) 2675
EheI GGCGCC 1 cut(s) 2675
ErhI CCWWGG 9 cut(s) 392, 650, 1269, 1314, 1506, 2030, 2319, 2537, 3917
FalI AAGNNNNNCTT 8 cut(s) 836, 868, 2349, 2381, 3327, 3359, 3446, 3478
FaqI GGGAC 6 cut(s) 237, 283, 696, 1668, 3020, 3204
FauI CCCGC 1 cut(s) 3406
FbaI TGATCA 2 cut(s) 604, 664
FriOI GRGCYC 2 cut(s) 433, 2577
FspBI CTAG 7 cut(s) 1119, 1182, 1589, 2004, 3099, 3542, 3735
GlaI GCGC 3 cut(s) 1362, 2613, 2675
GsaI CCCAGC 1 cut(s) 2632
GsuI CTGGAG 3 cut(s) 2755, 3007, 3170
HaeII RGCGCY 2 cut(s) 2615, 2677
HaeIII GGCC 7 cut(s) 339, 1369, 1543, 1780, 2449, 3681, 3922
HapII CCGG 6 cut(s) 86, 184, 589, 1370, 1978, 3127
HgaI GACGC 2 cut(s) 1665, 3179
HhaI GCGC 3 cut(s) 1363, 2614, 2676
Hin1I GRCGYC 2 cut(s) 1657, 2674
Hin6I GCGC 3 cut(s) 1361, 2612, 2674
HinP1I GCGC 3 cut(s) 1361, 2612, 2674
HincII GTYRAC 2 cut(s) 1062, 2905
HindII GTYRAC 2 cut(s) 1062, 2905
HindIII AAGCTT 5 cut(s) 837, 1758, 2342, 2363, 4091
HpaI GTTAAC 2 cut(s) 1062, 2905
HpaII CCGG 6 cut(s) 86, 184, 589, 1370, 1978, 3127
HphI GGTGA 6 cut(s) 419, 1082, 2153, 2254, 2632, 2812
Hpy166II GTNNAC 6 cut(s) 306, 441, 741, 1062, 1080, 2905
Hpy8I GTNNAC 6 cut(s) 306, 441, 741, 1062, 1080, 2905
Hpy99I CGWCG 1 cut(s) 2304
HpyCH4IV ACGT 4 cut(s) 1155, 1720, 2302, 2854
HpySE526I ACGT 4 cut(s) 1155, 1720, 2302, 2854
Hsp92I GRCGYC 2 cut(s) 1657, 2674
HspAI GCGC 3 cut(s) 1361, 2612, 2674
KasI GGCGCC 1 cut(s) 2673
KflI GGGWCCC 1 cut(s) 3034
Ksp22I TGATCA 2 cut(s) 604, 664
KspAI GTTAAC 2 cut(s) 1062, 2905
Kzo9I GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
LguI GCTCTTC 2 cut(s) 375, 2107
LmnI GCTCC 7 cut(s) 358, 428, 1517, 1609, 2619, 3189, 4065
Lsp1109I GCAGC 8 cut(s) 198, 307, 348, 973, 2621, 3193, 3422, 3487
LweI GCATC 9 cut(s) 1027, 1321, 2156, 2215, 3265, 3420, 3627, 3957, 4093
MaeI CTAG 7 cut(s) 1119, 1182, 1589, 2004, 3099, 3542, 3735
MaeII ACGT 4 cut(s) 1155, 1720, 2302, 2854
MalI GATC 7 cut(s) 606, 666, 1041, 1123, 1911, 1932, 2966
MboI GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
MfeI CAATTG 2 cut(s) 3268, 3943
MflI RGATCY 3 cut(s) 1121, 1930, 2964
MhlI GDGCHC 7 cut(s) 433, 910, 1048, 1082, 2180, 2485, 2577
Mly113I GGCGCC 1 cut(s) 2674
MlyI GAGTC 7 cut(s) 38, 200, 446, 882, 2551, 3643, 4122
MmeI TCCRAC 8 cut(s) 552, 761, 1692, 2143, 2333, 2793, 2805, 3730
MroXI GAANNNNTTC 1 cut(s) 1323
MslI CAYNNNNRTG 2 cut(s) 1098, 1679
MspA1I CMGCKG 2 cut(s) 1175, 3413
MspCI CTTAAG 1 cut(s) 3578
MspI CCGG 6 cut(s) 86, 184, 589, 1370, 1978, 3127
MspR9I CCNGG 9 cut(s) 184, 185, 1365, 1383, 1979, 2510, 3127, 3658, 3699
MunI CAATTG 2 cut(s) 3268, 3943
Mva1269I GAATGC 1 cut(s) 3787
MvaI CCWGG 5 cut(s) 1365, 1383, 2510, 3658, 3699
MvnI CGCG 1 cut(s) 2692
NarI GGCGCC 1 cut(s) 2674
NciI CCSGG 4 cut(s) 184, 185, 1979, 3127
NcoI CCATGG 1 cut(s) 1314
NdeII GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
NmeAIII GCCGAG 4 cut(s) 1840, 2556, 2650, 2848
NmuCI GTSAC 4 cut(s) 41, 490, 1184, 2251
NspI RCATGY 3 cut(s) 2419, 2882, 3714
NspV TTCGAA 2 cut(s) 3212, 3440
PaeI GCATGC 2 cut(s) 2419, 2882
PagI TCATGA 2 cut(s) 433, 1801
PciSI GCTCTTC 2 cut(s) 375, 2107
PcsI WCGNNNNNNNCGW 1 cut(s) 1918
PctI GAATGC 1 cut(s) 3787
PdmI GAANNNNTTC 1 cut(s) 1323
PfeI GAWTC 7 cut(s) 1166, 1585, 1662, 3248, 3378, 3694, 3869
PflFI GACNNNGTC 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 2320
PfoI TCCNGGA 1 cut(s) 3656
PinAI ACCGGT 1 cut(s) 588
PleI GAGTC 7 cut(s) 38, 199, 445, 881, 2550, 3643, 4121
PluTI GGCGCC 1 cut(s) 2677
PpsI GAGTC 7 cut(s) 38, 199, 445, 881, 2550, 3643, 4121
Ppu21I YACGTR 1 cut(s) 1721
PpuMI RGGWCCY 1 cut(s) 3034
PshBI ATTAAT 3 cut(s) 1131, 1878, 2163
PsiI TTATAA 1 cut(s) 2462
Psp124BI GAGCTC 1 cut(s) 433
Psp5II RGGWCCY 1 cut(s) 3034
Psp6I CCWGG 5 cut(s) 1363, 1381, 2508, 3656, 3697
PspEI GGTNACC 2 cut(s) 3165, 3199
PspFI CCCAGC 1 cut(s) 2628
PspGI CCWGG 5 cut(s) 1363, 1381, 2508, 3656, 3697
PspPI GGNCC 6 cut(s) 710, 741, 1348, 1367, 1837, 3034
PspPPI RGGWCCY 1 cut(s) 3034
PsrI GAACNNNNNNTAC 2 cut(s) 2379, 2411
PstI CTGCAG 1 cut(s) 529
PstNI CAGNNNCTG 2 cut(s) 361, 1175
PsuI RGATCY 3 cut(s) 1121, 1930, 2964
PsyI GACNNNGTC 1 cut(s) 92
RseI CAYNNNNRTG 2 cut(s) 1098, 1679
SacI GAGCTC 1 cut(s) 433
SapI GCTCTTC 2 cut(s) 375, 2107
Sau3AI GATC 7 cut(s) 604, 664, 1039, 1121, 1909, 1930, 2964
Sau96I GGNCC 6 cut(s) 710, 741, 1348, 1367, 1837, 3034
ScaI AGTACT 1 cut(s) 1028
SchI GAGTC 7 cut(s) 38, 200, 446, 882, 2551, 3643, 4122
ScrFI CCNGG 9 cut(s) 184, 185, 1365, 1383, 1979, 2510, 3127, 3658, 3699
SduI GDGCHC 7 cut(s) 433, 910, 1048, 1082, 2180, 2485, 2577
SfaNI GCATC 9 cut(s) 1027, 1321, 2156, 2215, 3265, 3420, 3627, 3957, 4093
SfcI CTRYAG 2 cut(s) 525, 1201
SfoI GGCGCC 1 cut(s) 2675
SfuI TTCGAA 2 cut(s) 3212, 3440
SinI GGWCC 5 cut(s) 710, 741, 1348, 1837, 3034
SmaI CCCGGG 1 cut(s) 185
SmiMI CAYNNNNRTG 2 cut(s) 1098, 1679
SmlI CTYRAG 3 cut(s) 1706, 3333, 3578
SmoI CTYRAG 3 cut(s) 1706, 3333, 3578
SphI GCATGC 2 cut(s) 2419, 2882
SspDI GGCGCC 1 cut(s) 2673
SspI AATATT 5 cut(s) 22, 205, 1445, 1848, 3574
SspMI CTAG 7 cut(s) 1119, 1182, 1589, 2004, 3099, 3542, 3735
SstI GAGCTC 1 cut(s) 433
StyD4I CCNGG 9 cut(s) 182, 183, 1363, 1381, 1977, 2508, 3125, 3656, 3697
StyI CCWWGG 9 cut(s) 392, 650, 1269, 1314, 1506, 2030, 2319, 2537, 3917
TaiI ACGT 4 cut(s) 1158, 1723, 2305, 2857
TaqI TCGA 6 cut(s) 724, 2299, 3212, 3440, 3551, 3965
TatI WGTACW 5 cut(s) 130, 638, 1026, 1212, 2552
TauI GCSGC 5 cut(s) 1018, 1175, 1600, 3707, 3710
TfiI GAWTC 7 cut(s) 1166, 1585, 1662, 3248, 3378, 3694, 3869
TseFI GTSAC 4 cut(s) 41, 490, 1184, 2251
TseI GCWGC 8 cut(s) 211, 320, 361, 986, 2609, 3181, 3410, 3475
Tsp45I GTSAC 4 cut(s) 41, 490, 1184, 2251
TspGWI ACGGA 2 cut(s) 871, 3188
TspMI CCCGGG 1 cut(s) 183
Tth111I GACNNNGTC 1 cut(s) 92
Van91I CCANNNNNTGG 1 cut(s) 2320
Vha464I CTTAAG 1 cut(s) 3578
VneI GTGCAC 1 cut(s) 1078
VpaK11BI GGWCC 5 cut(s) 710, 741, 1348, 1837, 3034
VspI ATTAAT 3 cut(s) 1131, 1878, 2163
XagI CCTNNNNNAGG 2 cut(s) 353, 3333
XapI RAATTY 8 cut(s) 1323, 1480, 1486, 2488, 2803, 3584, 3729, 4027
XceI RCATGY 3 cut(s) 2419, 2882, 3714
XmaI CCCGGG 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 1323
XspI CTAG 7 cut(s) 1119, 1182, 1589, 2004, 3099, 3542, 3735
ZrmI AGTACT 1 cut(s) 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.