ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 454 |
| AccII | CGCG | 1 cut(s) | 18 |
| AciI | CCGC | 2 cut(s) | 18, 55 |
| AclWI | GGATC | 1 cut(s) | 533 |
| AcsI | RAATTY | 1 cut(s) | 387 |
| AcuI | CTGAAG | 1 cut(s) | 489 |
| AfaI | GTAC | 3 cut(s) | 15, 314, 412 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 285 |
| AgsI | TTSAA | 4 cut(s) | 83, 192, 242, 598 |
| AjiI | CACGTC | 1 cut(s) | 551 |
| AjnI | CCWGG | 1 cut(s) | 278 |
| AluBI | AGCT | 2 cut(s) | 376, 509 |
| AluI | AGCT | 2 cut(s) | 376, 509 |
| Alw26I | GTCTC | 1 cut(s) | 269 |
| AlwI | GGATC | 1 cut(s) | 533 |
| ApeKI | GCWGC | 2 cut(s) | 373, 626 |
| ApoI | RAATTY | 1 cut(s) | 387 |
| AsuC2I | CCSGG | 1 cut(s) | 33 |
| AsuHPI | GGTGA | 2 cut(s) | 17, 110 |
| BanI | GGYRCC | 1 cut(s) | 454 |
| BbvI | GCAGC | 2 cut(s) | 385, 613 |
| BccI | CCATC | 1 cut(s) | 124 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 118, 152 |
| BciT130I | CCWGG | 1 cut(s) | 280 |
| BclI | TGATCA | 1 cut(s) | 159 |
| BcnI | CCSGG | 1 cut(s) | 33 |
| BcoDI | GTCTC | 1 cut(s) | 269 |
| BfaI | CTAG | 4 cut(s) | 266, 326, 377, 510 |
| BfmI | CTRYAG | 2 cut(s) | 43, 371 |
| BisI | GCNGC | 2 cut(s) | 374, 627 |
| BlsI | GCNGC | 2 cut(s) | 375, 628 |
| Bme1390I | CCNGG | 2 cut(s) | 33, 280 |
| BmgBI | CACGTC | 1 cut(s) | 551 |
| BmiI | GGNNCC | 2 cut(s) | 88, 456 |
| BmrFI | CCNGG | 2 cut(s) | 33, 280 |
| BmrI | ACTGGG | 1 cut(s) | 53 |
| BmsI | GCATC | 1 cut(s) | 307 |
| BmuI | ACTGGG | 1 cut(s) | 53 |
| BpuMI | CCSGG | 1 cut(s) | 33 |
| BsaAI | YACGTR | 1 cut(s) | 316 |
| BsaI | GGTCTC | 1 cut(s) | 269 |
| BsaJI | CCNNGG | 1 cut(s) | 66 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 285 |
| Bse1I | ACTGG | 2 cut(s) | 59, 218 |
| BseBI | CCWGG | 1 cut(s) | 280 |
| BseDI | CCNNGG | 1 cut(s) | 66 |
| BseGI | GGATG | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 285 |
| BseNI | ACTGG | 2 cut(s) | 59, 218 |
| BseXI | GCAGC | 2 cut(s) | 385, 613 |
| BsgI | GTGCAG | 1 cut(s) | 483 |
| Bsh1236I | CGCG | 1 cut(s) | 18 |
| Bsh1285I | CGRYCG | 1 cut(s) | 32 |
| BshNI | GGYRCC | 1 cut(s) | 454 |
| BsiEI | CGRYCG | 1 cut(s) | 32 |
| BsiSI | CCGG | 2 cut(s) | 32, 630 |
| BsiWI | CGTACG | 1 cut(s) | 312 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 285 |
| BsmAI | GTCTC | 1 cut(s) | 269 |
| Bso31I | GGTCTC | 1 cut(s) | 269 |
| Bsp143I | GATC | 4 cut(s) | 159, 361, 538, 652 |
| Bsp19I | CCATGG | 1 cut(s) | 66 |
| BspACI | CCGC | 2 cut(s) | 18, 55 |
| BspFNI | CGCG | 1 cut(s) | 18 |
| BspLI | GGNNCC | 2 cut(s) | 88, 456 |
| BspMAI | CTGCAG | 2 cut(s) | 47, 375 |
| BspPI | GGATC | 1 cut(s) | 533 |
| BspT107I | GGYRCC | 1 cut(s) | 454 |
| BspTNI | GGTCTC | 1 cut(s) | 269 |
| BsrI | ACTGG | 2 cut(s) | 59, 218 |
| BssECI | CCNNGG | 1 cut(s) | 66 |
| BssMI | GATC | 4 cut(s) | 159, 361, 538, 652 |
| BssT1I | CCWWGG | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 3 cut(s) | 95, 121, 354 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 42 |
| BstBAI | YACGTR | 1 cut(s) | 316 |
| BstC8I | GCNNGC | 1 cut(s) | 563 |
| BstDSI | CCRYGG | 1 cut(s) | 66 |
| BstF5I | GGATG | 1 cut(s) | 237 |
| BstFNI | CGCG | 1 cut(s) | 18 |
| BstKTI | GATC | 4 cut(s) | 162, 364, 541, 655 |
| BstMAI | GTCTC | 1 cut(s) | 269 |
| BstMBI | GATC | 4 cut(s) | 159, 361, 538, 652 |
| BstMCI | CGRYCG | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 42, 295, 506, 623, 635 |
| BstNI | CCWGG | 1 cut(s) | 280 |
| BstSCI | CCNGG | 2 cut(s) | 31, 278 |
| BstSFI | CTRYAG | 2 cut(s) | 43, 371 |
| BstSNI | TACGTA | 1 cut(s) | 316 |
| BstUI | CGCG | 1 cut(s) | 18 |
| BstV1I | GCAGC | 2 cut(s) | 385, 613 |
| BtgI | CCRYGG | 1 cut(s) | 66 |
| BtgZI | GCGATG | 2 cut(s) | 143, 597 |
| BtrI | CACGTC | 1 cut(s) | 551 |
| BtsCI | GGATG | 1 cut(s) | 237 |
| BtsI | GCAGTG | 1 cut(s) | 52 |
| BtsIMutI | CAGTG | 1 cut(s) | 52 |
| Cac8I | GCNNGC | 1 cut(s) | 563 |
| Csp6I | GTAC | 3 cut(s) | 14, 313, 411 |
| CviAII | CATG | 1 cut(s) | 67 |
| CviQI | GTAC | 3 cut(s) | 14, 313, 411 |
| DpnI | GATC | 4 cut(s) | 161, 363, 540, 654 |
| DpnII | GATC | 4 cut(s) | 159, 361, 538, 652 |
| EciI | GGCGGA | 1 cut(s) | 44 |
| Eco105I | TACGTA | 1 cut(s) | 316 |
| Eco130I | CCWWGG | 1 cut(s) | 66 |
| Eco31I | GGTCTC | 1 cut(s) | 269 |
| Eco57I | CTGAAG | 1 cut(s) | 489 |
| EcoRII | CCWGG | 1 cut(s) | 278 |
| EcoT14I | CCWWGG | 1 cut(s) | 66 |
| EcoT22I | ATGCAT | 1 cut(s) | 300 |
| ErhI | CCWWGG | 1 cut(s) | 66 |
| FaeI | CATG | 1 cut(s) | 70 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 198, 230 |
| FatI | CATG | 1 cut(s) | 66 |
| FbaI | TGATCA | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 2 cut(s) | 374, 627 |
| FokI | GGATG | 1 cut(s) | 244 |
| Fsp4HI | GCNGC | 2 cut(s) | 374, 627 |
| FspBI | CTAG | 4 cut(s) | 266, 326, 377, 510 |
| GluI | GCNGC | 2 cut(s) | 374, 627 |
| HapII | CCGG | 2 cut(s) | 32, 630 |
| Hin1II | CATG | 1 cut(s) | 70 |
| HinfI | GANTC | 1 cut(s) | 520 |
| HpaII | CCGG | 2 cut(s) | 32, 630 |
| HphI | GGTGA | 2 cut(s) | 17, 110 |
| Hpy188I | TCNGA | 1 cut(s) | 538 |
| Hpy188III | TCNNGA | 2 cut(s) | 74, 157 |
| HpyAV | CCTTC | 5 cut(s) | 224, 265, 433, 471, 513 |
| HpyCH4III | ACNGT | 3 cut(s) | 95, 121, 354 |
| HpyCH4IV | ACGT | 3 cut(s) | 311, 315, 550 |
| HpyCH4V | TGCA | 8 cut(s) | 45, 139, 298, 373, 467, 500, 646, 668 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 42, 295, 506, 623, 635 |
| HpySE526I | ACGT | 3 cut(s) | 311, 315, 550 |
| Hsp92II | CATG | 1 cut(s) | 70 |
| Ksp22I | TGATCA | 1 cut(s) | 159 |
| Kzo9I | GATC | 4 cut(s) | 159, 361, 538, 652 |
| LmnI | GCTCC | 1 cut(s) | 86 |
| Lsp1109I | GCAGC | 2 cut(s) | 385, 613 |
| LweI | GCATC | 1 cut(s) | 307 |
| MaeI | CTAG | 4 cut(s) | 266, 326, 377, 510 |
| MaeII | ACGT | 3 cut(s) | 311, 315, 550 |
| MaeIII | GTNAC | 2 cut(s) | 47, 255 |
| MalI | GATC | 4 cut(s) | 161, 363, 540, 654 |
| MboI | GATC | 4 cut(s) | 159, 361, 538, 652 |
| MboII | GAAGA | 1 cut(s) | 113 |
| MluCI | AATT | 4 cut(s) | 110, 222, 387, 449 |
| MnlI | CCTC | 3 cut(s) | 174, 333, 429 |
| Mph1103I | ATGCAT | 1 cut(s) | 300 |
| MseI | TTAA | 1 cut(s) | 621 |
| MspI | CCGG | 2 cut(s) | 32, 630 |
| MspR9I | CCNGG | 2 cut(s) | 33, 280 |
| MvaI | CCWGG | 1 cut(s) | 280 |
| MvnI | CGCG | 1 cut(s) | 18 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 42, 295, 506, 623, 635 |
| NciI | CCSGG | 1 cut(s) | 33 |
| NcoI | CCATGG | 1 cut(s) | 66 |
| NdeII | GATC | 4 cut(s) | 159, 361, 538, 652 |
| NlaIII | CATG | 1 cut(s) | 70 |
| NlaIV | GGNNCC | 2 cut(s) | 88, 456 |
| NmuCI | GTSAC | 2 cut(s) | 47, 255 |
| NsiI | ATGCAT | 1 cut(s) | 300 |
| PfeI | GAWTC | 1 cut(s) | 520 |
| Pfl23II | CGTACG | 1 cut(s) | 312 |
| PkrI | GCNGC | 2 cut(s) | 375, 628 |
| Ppu21I | YACGTR | 1 cut(s) | 316 |
| Psp6I | CCWGG | 1 cut(s) | 278 |
| PspGI | CCWGG | 1 cut(s) | 278 |
| PspLI | CGTACG | 1 cut(s) | 312 |
| PspN4I | GGNNCC | 2 cut(s) | 88, 456 |
| PstI | CTGCAG | 2 cut(s) | 47, 375 |
| RsaI | GTAC | 3 cut(s) | 15, 314, 412 |
| RsaNI | GTAC | 3 cut(s) | 14, 313, 411 |
| SaqAI | TTAA | 1 cut(s) | 621 |
| SatI | GCNGC | 2 cut(s) | 374, 627 |
| Sau3AI | GATC | 4 cut(s) | 159, 361, 538, 652 |
| ScrFI | CCNGG | 2 cut(s) | 33, 280 |
| SfaNI | GCATC | 1 cut(s) | 307 |
| SfcI | CTRYAG | 2 cut(s) | 43, 371 |
| SnaBI | TACGTA | 1 cut(s) | 316 |
| Sse9I | AATT | 4 cut(s) | 110, 222, 387, 449 |
| SsiI | CCGC | 2 cut(s) | 18, 55 |
| SspI | AATATT | 1 cut(s) | 606 |
| SspMI | CTAG | 4 cut(s) | 266, 326, 377, 510 |
| StyD4I | CCNGG | 2 cut(s) | 31, 278 |
| StyI | CCWWGG | 1 cut(s) | 66 |
| TaaI | ACNGT | 3 cut(s) | 95, 121, 354 |
| TaiI | ACGT | 3 cut(s) | 314, 318, 553 |
| TaqI | TCGA | 2 cut(s) | 28, 301 |
| TasI | AATT | 4 cut(s) | 110, 222, 387, 449 |
| TfiI | GAWTC | 1 cut(s) | 520 |
| Tru1I | TTAA | 1 cut(s) | 621 |
| Tru9I | TTAA | 1 cut(s) | 621 |
| TscAI | CASTG | 1 cut(s) | 52 |
| TseFI | GTSAC | 2 cut(s) | 47, 255 |
| TseI | GCWGC | 2 cut(s) | 373, 626 |
| Tsp45I | GTSAC | 2 cut(s) | 47, 255 |
| TspDTI | ATGAA | 2 cut(s) | 24, 600 |
| TspRI | CASTG | 1 cut(s) | 52 |
| XapI | RAATTY | 1 cut(s) | 387 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 225 |
| XspI | CTAG | 4 cut(s) | 266, 326, 377, 510 |
| Zsp2I | ATGCAT | 1 cut(s) | 300 |