ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 5, 55, 112 |
| AclWI | GGATC | 2 cut(s) | 106, 156 |
| AcsI | RAATTY | 1 cut(s) | 92 |
| AlwI | GGATC | 2 cut(s) | 106, 156 |
| ApeKI | GCWGC | 2 cut(s) | 19, 109 |
| ApoI | RAATTY | 1 cut(s) | 92 |
| BbvI | GCAGC | 2 cut(s) | 31, 121 |
| BisI | GCNGC | 3 cut(s) | 20, 110, 113 |
| BlsI | GCNGC | 3 cut(s) | 21, 111, 114 |
| BmsI | GCATC | 1 cut(s) | 145 |
| BsaBI | GATNNNNATC | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 1 cut(s) | 123 |
| BsaWI | WCCGGW | 1 cut(s) | 13 |
| Bse1I | ACTGG | 1 cut(s) | 135 |
| Bse8I | GATNNNNATC | 1 cut(s) | 84 |
| BseDI | CCNNGG | 1 cut(s) | 123 |
| BseGI | GGATG | 1 cut(s) | 119 |
| BseJI | GATNNNNATC | 1 cut(s) | 84 |
| BseNI | ACTGG | 1 cut(s) | 135 |
| BseXI | GCAGC | 2 cut(s) | 31, 121 |
| BsgI | GTGCAG | 1 cut(s) | 38 |
| BsiSI | CCGG | 1 cut(s) | 14 |
| Bsp143I | GATC | 3 cut(s) | 98, 116, 148 |
| BspACI | CCGC | 3 cut(s) | 5, 55, 112 |
| BspHI | TCATGA | 2 cut(s) | 60, 186 |
| BspPI | GGATC | 2 cut(s) | 106, 156 |
| BsrI | ACTGG | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 123 |
| BssMI | GATC | 3 cut(s) | 98, 116, 148 |
| BssT1I | CCWWGG | 1 cut(s) | 123 |
| BstDEI | CTNAG | 1 cut(s) | 177 |
| BstF5I | GGATG | 1 cut(s) | 119 |
| BstKTI | GATC | 3 cut(s) | 101, 119, 151 |
| BstMBI | GATC | 3 cut(s) | 98, 116, 148 |
| BstV1I | GCAGC | 2 cut(s) | 31, 121 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BtsCI | GGATG | 1 cut(s) | 119 |
| CciI | TCATGA | 2 cut(s) | 60, 186 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 19, 54 |
| CviAII | CATG | 3 cut(s) | 52, 61, 187 |
| CviJI | RGCY | 1 cut(s) | 176 |
| CviKI_1 | RGCY | 1 cut(s) | 176 |
| DdeI | CTNAG | 1 cut(s) | 177 |
| DpnI | GATC | 3 cut(s) | 100, 118, 150 |
| DpnII | GATC | 3 cut(s) | 98, 116, 148 |
| Eco130I | CCWWGG | 1 cut(s) | 123 |
| EcoT14I | CCWWGG | 1 cut(s) | 123 |
| ErhI | CCWWGG | 1 cut(s) | 123 |
| FaeI | CATG | 3 cut(s) | 55, 64, 190 |
| FaiI | YATR | 5 cut(s) | 44, 53, 62, 188, 202 |
| FatI | CATG | 3 cut(s) | 51, 60, 186 |
| Fnu4HI | GCNGC | 3 cut(s) | 20, 110, 113 |
| FokI | GGATG | 1 cut(s) | 106 |
| Fsp4HI | GCNGC | 3 cut(s) | 20, 110, 113 |
| GluI | GCNGC | 3 cut(s) | 20, 110, 113 |
| HapII | CCGG | 1 cut(s) | 14 |
| Hin1II | CATG | 3 cut(s) | 55, 64, 190 |
| HinfI | GANTC | 1 cut(s) | 85 |
| HpaII | CCGG | 1 cut(s) | 14 |
| Hpy166II | GTNNAC | 1 cut(s) | 136 |
| Hpy188III | TCNNGA | 4 cut(s) | 61, 89, 152, 187 |
| Hpy8I | GTNNAC | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 1 cut(s) | 19 |
| HpyF3I | CTNAG | 1 cut(s) | 177 |
| Hsp92II | CATG | 3 cut(s) | 55, 64, 190 |
| Kzo9I | GATC | 3 cut(s) | 98, 116, 148 |
| LpnPI | CCDG | 3 cut(s) | 27, 74, 116 |
| Lsp1109I | GCAGC | 2 cut(s) | 31, 121 |
| LweI | GCATC | 1 cut(s) | 145 |
| MalI | GATC | 3 cut(s) | 100, 118, 150 |
| MboI | GATC | 3 cut(s) | 98, 116, 148 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MluCI | AATT | 1 cut(s) | 92 |
| MnlI | CCTC | 2 cut(s) | 70, 156 |
| MspA1I | CMGCKG | 1 cut(s) | 112 |
| MspI | CCGG | 1 cut(s) | 14 |
| NdeII | GATC | 3 cut(s) | 98, 116, 148 |
| NlaIII | CATG | 3 cut(s) | 55, 64, 190 |
| PagI | TCATGA | 2 cut(s) | 60, 186 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PkrI | GCNGC | 3 cut(s) | 21, 111, 114 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| SatI | GCNGC | 3 cut(s) | 20, 110, 113 |
| Sau3AI | GATC | 3 cut(s) | 98, 116, 148 |
| SfaNI | GCATC | 1 cut(s) | 145 |
| Sse9I | AATT | 1 cut(s) | 92 |
| SsiI | CCGC | 3 cut(s) | 5, 55, 112 |
| StyI | CCWWGG | 1 cut(s) | 123 |
| TasI | AATT | 1 cut(s) | 92 |
| TauI | GCSGC | 1 cut(s) | 115 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| TseI | GCWGC | 2 cut(s) | 19, 109 |
| TspDTI | ATGAA | 4 cut(s) | 37, 49, 77, 203 |
| XapI | RAATTY | 1 cut(s) | 92 |