Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 231, 267 |
| AjnI | CCWGG | 2 cut(s) | 55, 211 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 59, 91 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 90, 122 |
| AluBI | AGCT | 3 cut(s) | 44, 181, 312 |
| AluI | AGCT | 3 cut(s) | 44, 181, 312 |
| Alw26I | GTCTC | 1 cut(s) | 121 |
| AoxI | GGCC | 2 cut(s) | 215, 286 |
| AseI | ATTAAT | 1 cut(s) | 21 |
| AspS9I | GGNCC | 1 cut(s) | 215 |
| AsuII | TTCGAA | 1 cut(s) | 65 |
| BceAI | ACGGC | 1 cut(s) | 208 |
| BciT130I | CCWGG | 2 cut(s) | 57, 213 |
| BcoDI | GTCTC | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 2 cut(s) | 57, 213 |
| BmgT120I | GGNCC | 1 cut(s) | 215 |
| BmrFI | CCNGG | 2 cut(s) | 57, 213 |
| BmsI | GCATC | 2 cut(s) | 70, 235 |
| Bpu10I | CCTNAGC | 1 cut(s) | 201 |
| Bpu14I | TTCGAA | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 3 cut(s) | 170, 212, 277 |
| Bse1I | ACTGG | 1 cut(s) | 113 |
| BseBI | CCWGG | 2 cut(s) | 57, 213 |
| BseDI | CCNNGG | 3 cut(s) | 170, 212, 277 |
| BseGI | GGATG | 1 cut(s) | 85 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BseNI | ACTGG | 1 cut(s) | 113 |
| BshFI | GGCC | 2 cut(s) | 217, 288 |
| BslFI | GGGAC | 1 cut(s) | 141 |
| BsmAI | GTCTC | 1 cut(s) | 121 |
| BsmFI | GGGAC | 1 cut(s) | 141 |
| BsnI | GGCC | 2 cut(s) | 217, 288 |
| Bsp119I | TTCGAA | 1 cut(s) | 65 |
| Bsp19I | CCATGG | 1 cut(s) | 170 |
| BspACI | CCGC | 2 cut(s) | 231, 267 |
| BspANI | GGCC | 2 cut(s) | 217, 288 |
| BspCNI | CTCAG | 1 cut(s) | 53 |
| BspT104I | TTCGAA | 1 cut(s) | 65 |
| BsrI | ACTGG | 1 cut(s) | 113 |
| BssECI | CCNNGG | 3 cut(s) | 170, 212, 277 |
| BssT1I | CCWWGG | 1 cut(s) | 170 |
| Bst2UI | CCWGG | 2 cut(s) | 57, 213 |
| Bst4CI | ACNGT | 1 cut(s) | 281 |
| BstBI | TTCGAA | 1 cut(s) | 65 |
| BstDEI | CTNAG | 2 cut(s) | 40, 201 |
| BstDSI | CCRYGG | 2 cut(s) | 170, 277 |
| BstF5I | GGATG | 1 cut(s) | 85 |
| BstMAI | GTCTC | 1 cut(s) | 121 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 273 |
| BstNI | CCWGG | 2 cut(s) | 57, 213 |
| BstNSI | RCATGY | 1 cut(s) | 55 |
| BstSCI | CCNGG | 2 cut(s) | 55, 211 |
| BsuRI | GGCC | 2 cut(s) | 217, 288 |
| BtgI | CCRYGG | 2 cut(s) | 170, 277 |
| BtsCI | GGATG | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 1 cut(s) | 215 |
| CviAII | CATG | 3 cut(s) | 52, 94, 171 |
| CviJI | RGCY | 8 cut(s) | 44, 112, 181, 195, 200, 217, 288, 312 |
| CviKI_1 | RGCY | 8 cut(s) | 44, 112, 181, 195, 200, 217, 288, 312 |
| DdeI | CTNAG | 2 cut(s) | 40, 201 |
| Eco130I | CCWWGG | 1 cut(s) | 170 |
| EcoRII | CCWGG | 2 cut(s) | 55, 211 |
| EcoT14I | CCWWGG | 1 cut(s) | 170 |
| ErhI | CCWWGG | 1 cut(s) | 170 |
| FaeI | CATG | 3 cut(s) | 55, 97, 174 |
| FaiI | YATR | 4 cut(s) | 53, 95, 172, 291 |
| FaqI | GGGAC | 1 cut(s) | 141 |
| FatI | CATG | 3 cut(s) | 51, 93, 170 |
| FokI | GGATG | 1 cut(s) | 92 |
| HaeIII | GGCC | 2 cut(s) | 217, 288 |
| Hin1II | CATG | 3 cut(s) | 55, 97, 174 |
| HindIII | AAGCTT | 1 cut(s) | 179 |
| HinfI | GANTC | 3 cut(s) | 31, 154, 208 |
| Hpy188III | TCNNGA | 2 cut(s) | 242, 307 |
| HpyCH4III | ACNGT | 1 cut(s) | 281 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 273 |
| HpyF3I | CTNAG | 2 cut(s) | 40, 201 |
| Hsp92II | CATG | 3 cut(s) | 55, 97, 174 |
| LmnI | GCTCC | 2 cut(s) | 49, 172 |
| LpnPI | CCDG | 5 cut(s) | 42, 69, 126, 198, 225 |
| LweI | GCATC | 2 cut(s) | 70, 235 |
| MfeI | CAATTG | 2 cut(s) | 86, 162 |
| MluCI | AATT | 2 cut(s) | 86, 162 |
| MlyI | GAGTC | 1 cut(s) | 163 |
| MseI | TTAA | 2 cut(s) | 21, 177 |
| MspR9I | CCNGG | 2 cut(s) | 57, 213 |
| MunI | CAATTG | 2 cut(s) | 86, 162 |
| MvaI | CCWGG | 2 cut(s) | 57, 213 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 273 |
| NcoI | CCATGG | 1 cut(s) | 170 |
| NlaIII | CATG | 3 cut(s) | 55, 97, 174 |
| NspI | RCATGY | 1 cut(s) | 55 |
| NspV | TTCGAA | 1 cut(s) | 65 |
| PfeI | GAWTC | 2 cut(s) | 31, 208 |
| PleI | GAGTC | 1 cut(s) | 162 |
| PpsI | GAGTC | 1 cut(s) | 162 |
| PshBI | ATTAAT | 1 cut(s) | 21 |
| Psp6I | CCWGG | 2 cut(s) | 55, 211 |
| PspGI | CCWGG | 2 cut(s) | 55, 211 |
| PspPI | GGNCC | 1 cut(s) | 215 |
| SaqAI | TTAA | 2 cut(s) | 21, 177 |
| Sau96I | GGNCC | 1 cut(s) | 215 |
| SchI | GAGTC | 1 cut(s) | 163 |
| ScrFI | CCNGG | 2 cut(s) | 57, 213 |
| SetI | ASST | 3 cut(s) | 46, 183, 314 |
| SfaNI | GCATC | 2 cut(s) | 70, 235 |
| SfuI | TTCGAA | 1 cut(s) | 65 |
| Sse9I | AATT | 2 cut(s) | 86, 162 |
| SsiI | CCGC | 2 cut(s) | 231, 267 |
| StyD4I | CCNGG | 2 cut(s) | 55, 211 |
| StyI | CCWWGG | 1 cut(s) | 170 |
| TaaI | ACNGT | 1 cut(s) | 281 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TasI | AATT | 2 cut(s) | 86, 162 |
| TfiI | GAWTC | 2 cut(s) | 31, 208 |
| Tru1I | TTAA | 2 cut(s) | 21, 177 |
| Tru9I | TTAA | 2 cut(s) | 21, 177 |
| VspI | ATTAAT | 1 cut(s) | 21 |
| XceI | RCATGY | 1 cut(s) | 55 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 168 |