ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 450 |
| AccII | CGCG | 1 cut(s) | 571 |
| AciI | CCGC | 1 cut(s) | 569 |
| AclWI | GGATC | 1 cut(s) | 632 |
| AcsI | RAATTY | 1 cut(s) | 537 |
| AcuI | CTGAAG | 4 cut(s) | 206, 270, 366, 486 |
| AfaI | GTAC | 2 cut(s) | 39, 93 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 617 |
| AflIII | ACRYGT | 1 cut(s) | 560 |
| AgsI | TTSAA | 4 cut(s) | 320, 522, 527, 544 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 240, 336, 564 |
| AleI | CACNNNNGTG | 2 cut(s) | 287, 383 |
| AluBI | AGCT | 4 cut(s) | 80, 165, 187, 647 |
| AluI | AGCT | 4 cut(s) | 80, 165, 187, 647 |
| AlwI | GGATC | 1 cut(s) | 632 |
| AoxI | GGCC | 1 cut(s) | 417 |
| ApeKI | GCWGC | 4 cut(s) | 165, 191, 246, 342 |
| ApoI | RAATTY | 1 cut(s) | 537 |
| AsuHPI | GGTGA | 1 cut(s) | 607 |
| AsuNHI | GCTAGC | 1 cut(s) | 488 |
| BbvI | GCAGC | 4 cut(s) | 152, 178, 258, 354 |
| BccI | CCATC | 1 cut(s) | 635 |
| BceAI | ACGGC | 1 cut(s) | 477 |
| BfaI | CTAG | 3 cut(s) | 84, 408, 489 |
| BfmI | CTRYAG | 1 cut(s) | 444 |
| BfuAI | ACCTGC | 1 cut(s) | 450 |
| BglII | AGATCT | 1 cut(s) | 529 |
| BisI | GCNGC | 4 cut(s) | 166, 192, 247, 343 |
| BlsI | GCNGC | 4 cut(s) | 167, 193, 248, 344 |
| BmcAI | AGTACT | 1 cut(s) | 39 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 240, 336, 564 |
| BmiI | GGNNCC | 1 cut(s) | 395 |
| BmsI | GCATC | 1 cut(s) | 613 |
| BmtI | GCTAGC | 1 cut(s) | 492 |
| Bpu10I | CCTNAGC | 1 cut(s) | 76 |
| BsaBI | GATNNNNATC | 1 cut(s) | 629 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 617 |
| Bse8I | GATNNNNATC | 1 cut(s) | 629 |
| BseGI | GGATG | 1 cut(s) | 604 |
| BseJI | GATNNNNATC | 1 cut(s) | 629 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BseMII | CTCAG | 1 cut(s) | 651 |
| BseXI | GCAGC | 4 cut(s) | 152, 178, 258, 354 |
| BsgI | GTGCAG | 1 cut(s) | 478 |
| Bsh1236I | CGCG | 1 cut(s) | 571 |
| BshFI | GGCC | 1 cut(s) | 419 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BsnI | GGCC | 1 cut(s) | 419 |
| Bsp143I | GATC | 3 cut(s) | 529, 624, 630 |
| BspACI | CCGC | 1 cut(s) | 569 |
| BspANI | GGCC | 1 cut(s) | 419 |
| BspCNI | CTCAG | 1 cut(s) | 650 |
| BspFNI | CGCG | 1 cut(s) | 571 |
| BspLI | GGNNCC | 1 cut(s) | 395 |
| BspMI | ACCTGC | 1 cut(s) | 450 |
| BspOI | GCTAGC | 1 cut(s) | 492 |
| BspPI | GGATC | 1 cut(s) | 632 |
| BssMI | GATC | 3 cut(s) | 529, 624, 630 |
| Bst4CI | ACNGT | 1 cut(s) | 445 |
| BstC8I | GCNNGC | 5 cut(s) | 189, 277, 373, 405, 490 |
| BstDEI | CTNAG | 2 cut(s) | 76, 637 |
| BstF5I | GGATG | 1 cut(s) | 604 |
| BstFNI | CGCG | 1 cut(s) | 571 |
| BstKTI | GATC | 3 cut(s) | 532, 627, 633 |
| BstMBI | GATC | 3 cut(s) | 529, 624, 630 |
| BstNSI | RCATGY | 8 cut(s) | 220, 279, 305, 316, 375, 407, 514, 564 |
| BstSFI | CTRYAG | 1 cut(s) | 444 |
| BstUI | CGCG | 1 cut(s) | 571 |
| BstV1I | GCAGC | 4 cut(s) | 152, 178, 258, 354 |
| BstX2I | RGATCY | 1 cut(s) | 529 |
| BstYI | RGATCY | 1 cut(s) | 529 |
| BsuRI | GGCC | 1 cut(s) | 419 |
| BtsCI | GGATG | 1 cut(s) | 604 |
| BtsIMutI | CAGTG | 2 cut(s) | 294, 390 |
| BveI | ACCTGC | 1 cut(s) | 450 |
| Cac8I | GCNNGC | 5 cut(s) | 189, 277, 373, 405, 490 |
| CseI | GACGC | 1 cut(s) | 560 |
| Csp6I | GTAC | 2 cut(s) | 38, 92 |
| CviJI | RGCY | 8 cut(s) | 80, 165, 187, 249, 345, 419, 492, 647 |
| CviKI_1 | RGCY | 8 cut(s) | 80, 165, 187, 249, 345, 419, 492, 647 |
| CviQI | GTAC | 2 cut(s) | 38, 92 |
| DdeI | CTNAG | 2 cut(s) | 76, 637 |
| DpnI | GATC | 3 cut(s) | 531, 626, 632 |
| DpnII | GATC | 3 cut(s) | 529, 624, 630 |
| DriI | GACNNNNNGTC | 3 cut(s) | 240, 336, 564 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 240, 336, 564 |
| Eco57I | CTGAAG | 4 cut(s) | 206, 270, 366, 486 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 127, 159 |
| Fnu4HI | GCNGC | 4 cut(s) | 166, 192, 247, 343 |
| FokI | GGATG | 1 cut(s) | 591 |
| Fsp4HI | GCNGC | 4 cut(s) | 166, 192, 247, 343 |
| FspBI | CTAG | 3 cut(s) | 84, 408, 489 |
| GluI | GCNGC | 4 cut(s) | 166, 192, 247, 343 |
| HaeIII | GGCC | 1 cut(s) | 419 |
| HgaI | GACGC | 1 cut(s) | 560 |
| HincII | GTYRAC | 1 cut(s) | 12 |
| HindII | GTYRAC | 1 cut(s) | 12 |
| HinfI | GANTC | 2 cut(s) | 113, 121 |
| HphI | GGTGA | 1 cut(s) | 607 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 92 |
| Hpy188I | TCNGA | 3 cut(s) | 102, 536, 640 |
| Hpy188III | TCNNGA | 3 cut(s) | 84, 527, 628 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 92 |
| HpyAV | CCTTC | 2 cut(s) | 13, 97 |
| HpyCH4III | ACNGT | 1 cut(s) | 445 |
| HpyCH4V | TGCA | 5 cut(s) | 58, 168, 305, 459, 514 |
| HpyF3I | CTNAG | 2 cut(s) | 76, 637 |
| Kzo9I | GATC | 3 cut(s) | 529, 624, 630 |
| LmnI | GCTCC | 4 cut(s) | 162, 199, 583, 644 |
| LpnPI | CCDG | 2 cut(s) | 445, 489 |
| Lsp1109I | GCAGC | 4 cut(s) | 152, 178, 258, 354 |
| LweI | GCATC | 1 cut(s) | 613 |
| MaeI | CTAG | 3 cut(s) | 84, 408, 489 |
| MaeIII | GTNAC | 3 cut(s) | 122, 506, 556 |
| MalI | GATC | 3 cut(s) | 531, 626, 632 |
| MboI | GATC | 3 cut(s) | 529, 624, 630 |
| MboII | GAAGA | 1 cut(s) | 17 |
| MfeI | CAATTG | 1 cut(s) | 320 |
| MflI | RGATCY | 1 cut(s) | 529 |
| MluCI | AATT | 9 cut(s) | 254, 263, 320, 350, 359, 517, 522, 537, 598 |
| MlyI | GAGTC | 1 cut(s) | 130 |
| MmeI | TCCRAC | 1 cut(s) | 80 |
| MnlI | CCTC | 5 cut(s) | 59, 261, 357, 586, 618 |
| MseI | TTAA | 2 cut(s) | 257, 353 |
| MslI | CAYNNNNRTG | 3 cut(s) | 287, 306, 383 |
| MunI | CAATTG | 1 cut(s) | 320 |
| MvnI | CGCG | 1 cut(s) | 571 |
| NdeII | GATC | 3 cut(s) | 529, 624, 630 |
| NheI | GCTAGC | 1 cut(s) | 488 |
| NlaIV | GGNNCC | 1 cut(s) | 395 |
| NmuCI | GTSAC | 3 cut(s) | 122, 506, 556 |
| NspI | RCATGY | 8 cut(s) | 220, 279, 305, 316, 375, 407, 514, 564 |
| OliI | CACNNNNGTG | 2 cut(s) | 287, 383 |
| PaeI | GCATGC | 3 cut(s) | 279, 375, 407 |
| PciI | ACATGT | 1 cut(s) | 560 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| PkrI | GCNGC | 4 cut(s) | 167, 193, 248, 344 |
| PleI | GAGTC | 1 cut(s) | 129 |
| PpsI | GAGTC | 1 cut(s) | 129 |
| PscI | ACATGT | 1 cut(s) | 560 |
| PspN4I | GGNNCC | 1 cut(s) | 395 |
| PsuI | RGATCY | 1 cut(s) | 529 |
| RsaI | GTAC | 2 cut(s) | 39, 93 |
| RsaNI | GTAC | 2 cut(s) | 38, 92 |
| RseI | CAYNNNNRTG | 3 cut(s) | 287, 306, 383 |
| SaqAI | TTAA | 2 cut(s) | 257, 353 |
| SatI | GCNGC | 4 cut(s) | 166, 192, 247, 343 |
| Sau3AI | GATC | 3 cut(s) | 529, 624, 630 |
| ScaI | AGTACT | 1 cut(s) | 39 |
| SchI | GAGTC | 1 cut(s) | 130 |
| SetI | ASST | 9 cut(s) | 24, 70, 82, 167, 189, 464, 508, 597, 649 |
| SfaNI | GCATC | 1 cut(s) | 613 |
| SfcI | CTRYAG | 1 cut(s) | 444 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 287, 306, 383 |
| SphI | GCATGC | 3 cut(s) | 279, 375, 407 |
| Sse9I | AATT | 9 cut(s) | 254, 263, 320, 350, 359, 517, 522, 537, 598 |
| SsiI | CCGC | 1 cut(s) | 569 |
| SspMI | CTAG | 3 cut(s) | 84, 408, 489 |
| TaaI | ACNGT | 1 cut(s) | 445 |
| TaqI | TCGA | 1 cut(s) | 34 |
| TasI | AATT | 9 cut(s) | 254, 263, 320, 350, 359, 517, 522, 537, 598 |
| TatI | WGTACW | 2 cut(s) | 37, 91 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| Tru1I | TTAA | 2 cut(s) | 257, 353 |
| Tru9I | TTAA | 2 cut(s) | 257, 353 |
| TscAI | CASTG | 2 cut(s) | 294, 390 |
| TseFI | GTSAC | 3 cut(s) | 122, 506, 556 |
| TseI | GCWGC | 4 cut(s) | 165, 191, 246, 342 |
| Tsp45I | GTSAC | 3 cut(s) | 122, 506, 556 |
| TspRI | CASTG | 2 cut(s) | 294, 390 |
| XapI | RAATTY | 1 cut(s) | 537 |
| XbaI | TCTAGA | 1 cut(s) | 83 |
| XceI | RCATGY | 8 cut(s) | 220, 279, 305, 316, 375, 407, 514, 564 |
| XspI | CTAG | 3 cut(s) | 84, 408, 489 |
| ZrmI | AGTACT | 1 cut(s) | 39 |