ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 403 |
| AcvI | CACGTG | 1 cut(s) | 97 |
| AflIII | ACRYGT | 2 cut(s) | 94, 96 |
| AgsI | TTSAA | 4 cut(s) | 124, 155, 180, 428 |
| AjnI | CCWGG | 1 cut(s) | 294 |
| AluBI | AGCT | 1 cut(s) | 437 |
| AluI | AGCT | 1 cut(s) | 437 |
| Alw21I | GWGCWC | 1 cut(s) | 292 |
| Alw26I | GTCTC | 1 cut(s) | 105 |
| Alw44I | GTGCAC | 1 cut(s) | 288 |
| Ama87I | CYCGRG | 1 cut(s) | 12 |
| ApaLI | GTGCAC | 1 cut(s) | 288 |
| ApeKI | GCWGC | 2 cut(s) | 259, 371 |
| ApoI | RAATTY | 1 cut(s) | 403 |
| AspS9I | GGNCC | 1 cut(s) | 75 |
| AvaI | CYCGRG | 1 cut(s) | 12 |
| AvaII | GGWCC | 1 cut(s) | 75 |
| BaeGI | GKGCMC | 1 cut(s) | 292 |
| BbrPI | CACGTG | 1 cut(s) | 97 |
| BbsI | GAAGAC | 1 cut(s) | 191 |
| Bbv12I | GWGCWC | 1 cut(s) | 292 |
| BbvI | GCAGC | 2 cut(s) | 271, 358 |
| BciT130I | CCWGG | 1 cut(s) | 296 |
| BcoDI | GTCTC | 1 cut(s) | 105 |
| BisI | GCNGC | 2 cut(s) | 260, 372 |
| BlsI | GCNGC | 2 cut(s) | 261, 373 |
| Bme1390I | CCNGG | 1 cut(s) | 296 |
| Bme18I | GGWCC | 1 cut(s) | 75 |
| BmeT110I | CYCGRG | 1 cut(s) | 12 |
| BmgT120I | GGNCC | 1 cut(s) | 75 |
| BmrFI | CCNGG | 1 cut(s) | 296 |
| BmsI | GCATC | 1 cut(s) | 7 |
| BpiI | GAAGAC | 1 cut(s) | 191 |
| BpmI | CTGGAG | 1 cut(s) | 278 |
| BsaAI | YACGTR | 1 cut(s) | 97 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 260, 290 |
| BseBI | CCWGG | 1 cut(s) | 296 |
| BseSI | GKGCMC | 1 cut(s) | 292 |
| BseXI | GCAGC | 2 cut(s) | 271, 358 |
| BsgI | GTGCAG | 1 cut(s) | 368 |
| BsiHKAI | GWGCWC | 1 cut(s) | 292 |
| BsiHKCI | CYCGRG | 1 cut(s) | 12 |
| BsmAI | GTCTC | 1 cut(s) | 105 |
| BsmI | GAATGC | 1 cut(s) | 41 |
| BsoBI | CYCGRG | 1 cut(s) | 12 |
| Bsp1286I | GDGCHC | 1 cut(s) | 292 |
| Bsp143I | GATC | 1 cut(s) | 358 |
| BssMI | GATC | 1 cut(s) | 358 |
| Bst2UI | CCWGG | 1 cut(s) | 296 |
| BstBAI | YACGTR | 1 cut(s) | 97 |
| BstKTI | GATC | 1 cut(s) | 361 |
| BstMAI | GTCTC | 1 cut(s) | 105 |
| BstMBI | GATC | 1 cut(s) | 358 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 380 |
| BstNI | CCWGG | 1 cut(s) | 296 |
| BstNSI | RCATGY | 1 cut(s) | 41 |
| BstSCI | CCNGG | 1 cut(s) | 294 |
| BstSLI | GKGCMC | 1 cut(s) | 292 |
| BstV1I | GCAGC | 2 cut(s) | 271, 358 |
| BstV2I | GAAGAC | 1 cut(s) | 191 |
| Cfr13I | GGNCC | 1 cut(s) | 75 |
| CviAII | CATG | 2 cut(s) | 38, 356 |
| CviJI | RGCY | 3 cut(s) | 110, 190, 437 |
| CviKI_1 | RGCY | 3 cut(s) | 110, 190, 437 |
| DpnI | GATC | 1 cut(s) | 360 |
| DpnII | GATC | 1 cut(s) | 358 |
| Eco47I | GGWCC | 1 cut(s) | 75 |
| Eco72I | CACGTG | 1 cut(s) | 97 |
| Eco88I | CYCGRG | 1 cut(s) | 12 |
| EcoRII | CCWGG | 1 cut(s) | 294 |
| EcoT22I | ATGCAT | 1 cut(s) | 43 |
| FaeI | CATG | 2 cut(s) | 41, 359 |
| FaiI | YATR | 8 cut(s) | 39, 137, 204, 222, 256, 357, 416, 459 |
| FatI | CATG | 2 cut(s) | 37, 355 |
| Fnu4HI | GCNGC | 2 cut(s) | 260, 372 |
| Fsp4HI | GCNGC | 2 cut(s) | 260, 372 |
| GluI | GCNGC | 2 cut(s) | 260, 372 |
| GsuI | CTGGAG | 1 cut(s) | 278 |
| Hin1II | CATG | 2 cut(s) | 41, 359 |
| HinfI | GANTC | 2 cut(s) | 209, 299 |
| Hpy166II | GTNNAC | 2 cut(s) | 65, 290 |
| Hpy188I | TCNGA | 2 cut(s) | 142, 422 |
| Hpy188III | TCNNGA | 1 cut(s) | 14 |
| Hpy8I | GTNNAC | 2 cut(s) | 65, 290 |
| HpyAV | CCTTC | 3 cut(s) | 161, 422, 445 |
| HpyCH4IV | ACGT | 2 cut(s) | 96, 160 |
| HpyCH4V | TGCA | 6 cut(s) | 41, 245, 290, 349, 355, 383 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 380 |
| HpySE526I | ACGT | 2 cut(s) | 96, 160 |
| Hsp92II | CATG | 2 cut(s) | 41, 359 |
| Kzo9I | GATC | 1 cut(s) | 358 |
| LpnPI | CCDG | 2 cut(s) | 281, 308 |
| Lsp1109I | GCAGC | 2 cut(s) | 271, 358 |
| LweI | GCATC | 1 cut(s) | 7 |
| MaeII | ACGT | 2 cut(s) | 96, 160 |
| MalI | GATC | 1 cut(s) | 360 |
| MboI | GATC | 1 cut(s) | 358 |
| MboII | GAAGA | 3 cut(s) | 77, 191, 221 |
| MhlI | GDGCHC | 1 cut(s) | 292 |
| MluCI | AATT | 3 cut(s) | 69, 79, 403 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MnlI | CCTC | 3 cut(s) | 99, 262, 402 |
| Mph1103I | ATGCAT | 1 cut(s) | 43 |
| MslI | CAYNNNNRTG | 1 cut(s) | 253 |
| MspR9I | CCNGG | 1 cut(s) | 296 |
| Mva1269I | GAATGC | 1 cut(s) | 41 |
| MvaI | CCWGG | 1 cut(s) | 296 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 380 |
| NdeII | GATC | 1 cut(s) | 358 |
| NlaIII | CATG | 2 cut(s) | 41, 359 |
| NsiI | ATGCAT | 1 cut(s) | 43 |
| NspI | RCATGY | 1 cut(s) | 41 |
| PaeR7I | CTCGAG | 1 cut(s) | 12 |
| PctI | GAATGC | 1 cut(s) | 41 |
| PfeI | GAWTC | 1 cut(s) | 299 |
| PfoI | TCCNGGA | 1 cut(s) | 294 |
| PkrI | GCNGC | 2 cut(s) | 261, 373 |
| PleI | GAGTC | 1 cut(s) | 217 |
| PmaCI | CACGTG | 1 cut(s) | 97 |
| PmlI | CACGTG | 1 cut(s) | 97 |
| PpsI | GAGTC | 1 cut(s) | 217 |
| Ppu21I | YACGTR | 1 cut(s) | 97 |
| Psp6I | CCWGG | 1 cut(s) | 294 |
| PspCI | CACGTG | 1 cut(s) | 97 |
| PspGI | CCWGG | 1 cut(s) | 294 |
| PspPI | GGNCC | 1 cut(s) | 75 |
| RseI | CAYNNNNRTG | 1 cut(s) | 253 |
| SatI | GCNGC | 2 cut(s) | 260, 372 |
| Sau3AI | GATC | 1 cut(s) | 358 |
| Sau96I | GGNCC | 1 cut(s) | 75 |
| SchI | GAGTC | 1 cut(s) | 218 |
| ScrFI | CCNGG | 1 cut(s) | 296 |
| SduI | GDGCHC | 1 cut(s) | 292 |
| SetI | ASST | 8 cut(s) | 99, 130, 163, 185, 317, 340, 439, 456 |
| SfaNI | GCATC | 1 cut(s) | 7 |
| Sfr274I | CTCGAG | 1 cut(s) | 12 |
| SinI | GGWCC | 1 cut(s) | 75 |
| SlaI | CTCGAG | 1 cut(s) | 12 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 253 |
| SmlI | CTYRAG | 1 cut(s) | 12 |
| SmoI | CTYRAG | 1 cut(s) | 12 |
| Sse9I | AATT | 3 cut(s) | 69, 79, 403 |
| StyD4I | CCNGG | 1 cut(s) | 294 |
| TaiI | ACGT | 2 cut(s) | 99, 163 |
| TaqI | TCGA | 1 cut(s) | 13 |
| TasI | AATT | 3 cut(s) | 69, 79, 403 |
| TfiI | GAWTC | 1 cut(s) | 299 |
| TseI | GCWGC | 2 cut(s) | 259, 371 |
| TspDTI | ATGAA | 4 cut(s) | 191, 221, 228, 446 |
| VneI | GTGCAC | 1 cut(s) | 288 |
| VpaK11BI | GGWCC | 1 cut(s) | 75 |
| XapI | RAATTY | 1 cut(s) | 403 |
| XceI | RCATGY | 1 cut(s) | 41 |
| XhoI | CTCGAG | 1 cut(s) | 12 |
| Zsp2I | ATGCAT | 1 cut(s) | 43 |