Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 166, 231, 341 |
| AfaI | GTAC | 1 cut(s) | 100 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 270, 271 |
| AgsI | TTSAA | 1 cut(s) | 244 |
| AjnI | CCWGG | 1 cut(s) | 51 |
| AluBI | AGCT | 3 cut(s) | 137, 226, 336 |
| AluI | AGCT | 3 cut(s) | 137, 226, 336 |
| ApeKI | GCWGC | 2 cut(s) | 226, 336 |
| ApoI | RAATTY | 3 cut(s) | 166, 231, 341 |
| BanII | GRGCYC | 1 cut(s) | 265 |
| BbvI | GCAGC | 2 cut(s) | 213, 323 |
| BccI | CCATC | 2 cut(s) | 124, 274 |
| BciT130I | CCWGG | 1 cut(s) | 53 |
| BfaI | CTAG | 2 cut(s) | 162, 219 |
| BisI | GCNGC | 2 cut(s) | 227, 337 |
| BlsI | GCNGC | 2 cut(s) | 228, 338 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BmsI | GCATC | 2 cut(s) | 148, 196 |
| BsaBI | GATNNNNATC | 1 cut(s) | 186 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 270, 271 |
| Bse8I | GATNNNNATC | 1 cut(s) | 186 |
| BseBI | CCWGG | 1 cut(s) | 53 |
| BseGI | GGATG | 1 cut(s) | 163 |
| BseJI | GATNNNNATC | 1 cut(s) | 186 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 270, 271 |
| BseXI | GCAGC | 2 cut(s) | 213, 323 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 270, 271 |
| Bsp1286I | GDGCHC | 1 cut(s) | 265 |
| Bst2UI | CCWGG | 1 cut(s) | 53 |
| BstC8I | GCNNGC | 2 cut(s) | 139, 224 |
| BstDEI | CTNAG | 1 cut(s) | 384 |
| BstF5I | GGATG | 1 cut(s) | 163 |
| BstNI | CCWGG | 1 cut(s) | 53 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 2 cut(s) | 213, 323 |
| BtsCI | GGATG | 1 cut(s) | 163 |
| Cac8I | GCNNGC | 2 cut(s) | 139, 224 |
| Csp6I | GTAC | 1 cut(s) | 99 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 98, 133 |
| CviAII | CATG | 1 cut(s) | 89 |
| CviJI | RGCY | 5 cut(s) | 137, 141, 226, 263, 336 |
| CviKI_1 | RGCY | 5 cut(s) | 137, 141, 226, 263, 336 |
| CviQI | GTAC | 1 cut(s) | 99 |
| DdeI | CTNAG | 1 cut(s) | 384 |
| DraI | TTTAAA | 2 cut(s) | 34, 309 |
| Eco24I | GRGCYC | 1 cut(s) | 265 |
| EcoRII | CCWGG | 1 cut(s) | 51 |
| EcoT38I | GRGCYC | 1 cut(s) | 265 |
| FaeI | CATG | 1 cut(s) | 92 |
| FaiI | YATR | 6 cut(s) | 59, 61, 63, 90, 194, 376 |
| FatI | CATG | 1 cut(s) | 88 |
| Fnu4HI | GCNGC | 2 cut(s) | 227, 337 |
| FokI | GGATG | 1 cut(s) | 170 |
| FriOI | GRGCYC | 1 cut(s) | 265 |
| Fsp4HI | GCNGC | 2 cut(s) | 227, 337 |
| FspBI | CTAG | 2 cut(s) | 162, 219 |
| GluI | GCNGC | 2 cut(s) | 227, 337 |
| Hin1II | CATG | 1 cut(s) | 92 |
| HinfI | GANTC | 1 cut(s) | 355 |
| Hpy188III | TCNNGA | 4 cut(s) | 236, 244, 252, 346 |
| HpyCH4V | TGCA | 3 cut(s) | 109, 229, 339 |
| HpyF3I | CTNAG | 1 cut(s) | 384 |
| Hsp92II | CATG | 1 cut(s) | 92 |
| LmnI | GCTCC | 1 cut(s) | 134 |
| LpnPI | CCDG | 3 cut(s) | 38, 65, 123 |
| Lsp1109I | GCAGC | 2 cut(s) | 213, 323 |
| LweI | GCATC | 2 cut(s) | 148, 196 |
| MaeI | CTAG | 2 cut(s) | 162, 219 |
| MaeIII | GTNAC | 1 cut(s) | 379 |
| MfeI | CAATTG | 1 cut(s) | 104 |
| MhlI | GDGCHC | 1 cut(s) | 265 |
| MluCI | AATT | 7 cut(s) | 104, 110, 166, 195, 231, 341, 371 |
| MnlI | CCTC | 2 cut(s) | 240, 342 |
| MseI | TTAA | 2 cut(s) | 33, 308 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| MunI | CAATTG | 1 cut(s) | 104 |
| MvaI | CCWGG | 1 cut(s) | 53 |
| NlaIII | CATG | 1 cut(s) | 92 |
| PfeI | GAWTC | 1 cut(s) | 355 |
| PfoI | TCCNGGA | 1 cut(s) | 51 |
| PkrI | GCNGC | 2 cut(s) | 228, 338 |
| Psp6I | CCWGG | 1 cut(s) | 51 |
| PspGI | CCWGG | 1 cut(s) | 51 |
| RsaI | GTAC | 1 cut(s) | 100 |
| RsaNI | GTAC | 1 cut(s) | 99 |
| SaqAI | TTAA | 2 cut(s) | 33, 308 |
| SatI | GCNGC | 2 cut(s) | 227, 337 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SduI | GDGCHC | 1 cut(s) | 265 |
| SetI | ASST | 5 cut(s) | 139, 228, 251, 338, 353 |
| SfaNI | GCATC | 2 cut(s) | 148, 196 |
| Sse9I | AATT | 7 cut(s) | 104, 110, 166, 195, 231, 341, 371 |
| SspMI | CTAG | 2 cut(s) | 162, 219 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| TaqI | TCGA | 3 cut(s) | 235, 259, 345 |
| TasI | AATT | 7 cut(s) | 104, 110, 166, 195, 231, 341, 371 |
| TfiI | GAWTC | 1 cut(s) | 355 |
| Tru1I | TTAA | 2 cut(s) | 33, 308 |
| Tru9I | TTAA | 2 cut(s) | 33, 308 |
| TseI | GCWGC | 2 cut(s) | 226, 336 |
| XapI | RAATTY | 3 cut(s) | 166, 231, 341 |
| XspI | CTAG | 2 cut(s) | 162, 219 |