Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 4 cut(s) | 9, 223, 314, 326 |
| AgsI | TTSAA | 5 cut(s) | 17, 243, 305, 320, 425 |
| AluBI | AGCT | 5 cut(s) | 73, 151, 291, 533, 547 |
| AluI | AGCT | 5 cut(s) | 73, 151, 291, 533, 547 |
| ApeKI | GCWGC | 2 cut(s) | 70, 291 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 28 |
| AsuC2I | CCSGG | 1 cut(s) | 630 |
| BaeGI | GKGCMC | 1 cut(s) | 574 |
| BbvI | GCAGC | 2 cut(s) | 82, 278 |
| BccI | CCATC | 2 cut(s) | 194, 530 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 98, 132 |
| BclI | TGATCA | 1 cut(s) | 376 |
| BcnI | CCSGG | 1 cut(s) | 630 |
| BfmI | CTRYAG | 1 cut(s) | 357 |
| BisI | GCNGC | 2 cut(s) | 71, 292 |
| BlsI | GCNGC | 2 cut(s) | 72, 293 |
| BmcAI | AGTACT | 1 cut(s) | 223 |
| Bme1390I | CCNGG | 1 cut(s) | 630 |
| BmrFI | CCNGG | 1 cut(s) | 630 |
| BmrI | ACTGGG | 1 cut(s) | 234 |
| BmuI | ACTGGG | 1 cut(s) | 234 |
| BpmI | CTGGAG | 1 cut(s) | 563 |
| BpuEI | CTTGAG | 1 cut(s) | 183 |
| BpuMI | CCSGG | 1 cut(s) | 630 |
| BsaWI | WCCGGW | 1 cut(s) | 338 |
| Bse1I | ACTGG | 2 cut(s) | 229, 666 |
| Bse3DI | GCAATG | 3 cut(s) | 36, 75, 301 |
| BseGI | GGATG | 1 cut(s) | 186 |
| BseMI | GCAATG | 3 cut(s) | 36, 75, 301 |
| BseMII | CTCAG | 1 cut(s) | 589 |
| BseNI | ACTGG | 2 cut(s) | 229, 666 |
| BseSI | GKGCMC | 1 cut(s) | 574 |
| BseXI | GCAGC | 2 cut(s) | 82, 278 |
| BsiSI | CCGG | 2 cut(s) | 339, 629 |
| Bsp1286I | GDGCHC | 1 cut(s) | 574 |
| Bsp1407I | TGTACA | 1 cut(s) | 324 |
| Bsp143I | GATC | 4 cut(s) | 46, 82, 255, 376 |
| BspCNI | CTCAG | 1 cut(s) | 588 |
| BsrDI | GCAATG | 3 cut(s) | 36, 75, 301 |
| BsrGI | TGTACA | 1 cut(s) | 324 |
| BsrI | ACTGG | 2 cut(s) | 229, 666 |
| BssMI | GATC | 4 cut(s) | 46, 82, 255, 376 |
| BstAUI | TGTACA | 1 cut(s) | 324 |
| BstC8I | GCNNGC | 1 cut(s) | 249 |
| BstDEI | CTNAG | 1 cut(s) | 575 |
| BstF5I | GGATG | 1 cut(s) | 186 |
| BstKTI | GATC | 4 cut(s) | 49, 85, 258, 379 |
| BstMBI | GATC | 4 cut(s) | 46, 82, 255, 376 |
| BstSCI | CCNGG | 1 cut(s) | 628 |
| BstSFI | CTRYAG | 1 cut(s) | 357 |
| BstSLI | GKGCMC | 1 cut(s) | 574 |
| BstV1I | GCAGC | 2 cut(s) | 82, 278 |
| BtsCI | GGATG | 1 cut(s) | 186 |
| BtsIMutI | CAGTG | 1 cut(s) | 415 |
| Cac8I | GCNNGC | 1 cut(s) | 249 |
| Csp6I | GTAC | 4 cut(s) | 8, 222, 313, 325 |
| CviQI | GTAC | 4 cut(s) | 8, 222, 313, 325 |
| DdeI | CTNAG | 1 cut(s) | 575 |
| DpnI | GATC | 4 cut(s) | 48, 84, 257, 378 |
| DpnII | GATC | 4 cut(s) | 46, 82, 255, 376 |
| Eco32I | GATATC | 1 cut(s) | 157 |
| EcoRV | GATATC | 1 cut(s) | 157 |
| FaiI | YATR | 4 cut(s) | 43, 45, 359, 525 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 135, 167 |
| FauNDI | CATATG | 1 cut(s) | 43 |
| FbaI | TGATCA | 1 cut(s) | 376 |
| Fnu4HI | GCNGC | 2 cut(s) | 71, 292 |
| FokI | GGATG | 1 cut(s) | 173 |
| Fsp4HI | GCNGC | 2 cut(s) | 71, 292 |
| GluI | GCNGC | 2 cut(s) | 71, 292 |
| GsuI | CTGGAG | 1 cut(s) | 563 |
| HapII | CCGG | 2 cut(s) | 339, 629 |
| HincII | GTYRAC | 1 cut(s) | 640 |
| HindII | GTYRAC | 1 cut(s) | 640 |
| HindIII | AAGCTT | 1 cut(s) | 149 |
| HinfI | GANTC | 1 cut(s) | 352 |
| HpaII | CCGG | 2 cut(s) | 339, 629 |
| Hpy166II | GTNNAC | 2 cut(s) | 325, 640 |
| Hpy188I | TCNGA | 3 cut(s) | 578, 652, 674 |
| Hpy188III | TCNNGA | 1 cut(s) | 374 |
| Hpy8I | GTNNAC | 2 cut(s) | 325, 640 |
| HpyAV | CCTTC | 2 cut(s) | 299, 410 |
| HpyCH4IV | ACGT | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 4 cut(s) | 41, 80, 294, 501 |
| HpyF3I | CTNAG | 1 cut(s) | 575 |
| HpySE526I | ACGT | 1 cut(s) | 6 |
| Ksp22I | TGATCA | 1 cut(s) | 376 |
| Kzo9I | GATC | 4 cut(s) | 46, 82, 255, 376 |
| LmnI | GCTCC | 1 cut(s) | 544 |
| Lsp1109I | GCAGC | 2 cut(s) | 82, 278 |
| MaeII | ACGT | 1 cut(s) | 6 |
| MalI | GATC | 4 cut(s) | 48, 84, 257, 378 |
| MboI | GATC | 4 cut(s) | 46, 82, 255, 376 |
| MhlI | GDGCHC | 1 cut(s) | 574 |
| MluCI | AATT | 2 cut(s) | 333, 586 |
| MnlI | CCTC | 3 cut(s) | 207, 381, 636 |
| MseI | TTAA | 1 cut(s) | 66 |
| MslI | CAYNNNNRTG | 2 cut(s) | 191, 320 |
| MspI | CCGG | 2 cut(s) | 339, 629 |
| MspR9I | CCNGG | 1 cut(s) | 630 |
| NciI | CCSGG | 1 cut(s) | 630 |
| NdeI | CATATG | 1 cut(s) | 43 |
| NdeII | GATC | 4 cut(s) | 46, 82, 255, 376 |
| PfeI | GAWTC | 1 cut(s) | 352 |
| PkrI | GCNGC | 2 cut(s) | 72, 293 |
| RsaI | GTAC | 4 cut(s) | 9, 223, 314, 326 |
| RsaNI | GTAC | 4 cut(s) | 8, 222, 313, 325 |
| RseI | CAYNNNNRTG | 2 cut(s) | 191, 320 |
| SaqAI | TTAA | 1 cut(s) | 66 |
| SatI | GCNGC | 2 cut(s) | 71, 292 |
| Sau3AI | GATC | 4 cut(s) | 46, 82, 255, 376 |
| ScaI | AGTACT | 1 cut(s) | 223 |
| ScrFI | CCNGG | 1 cut(s) | 630 |
| SduI | GDGCHC | 1 cut(s) | 574 |
| SetI | ASST | 7 cut(s) | 9, 75, 153, 293, 364, 535, 549 |
| SfcI | CTRYAG | 1 cut(s) | 357 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 191, 320 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| Sse9I | AATT | 2 cut(s) | 333, 586 |
| SspI | AATATT | 1 cut(s) | 598 |
| StyD4I | CCNGG | 1 cut(s) | 628 |
| TaiI | ACGT | 1 cut(s) | 9 |
| TaqI | TCGA | 1 cut(s) | 24 |
| TasI | AATT | 2 cut(s) | 333, 586 |
| TatI | WGTACW | 3 cut(s) | 221, 312, 324 |
| TfiI | GAWTC | 1 cut(s) | 352 |
| Tru1I | TTAA | 1 cut(s) | 66 |
| Tru9I | TTAA | 1 cut(s) | 66 |
| TscAI | CASTG | 1 cut(s) | 415 |
| TseI | GCWGC | 2 cut(s) | 70, 291 |
| TspDTI | ATGAA | 2 cut(s) | 429, 621 |
| TspGWI | ACGGA | 1 cut(s) | 179 |
| TspRI | CASTG | 1 cut(s) | 415 |
| ZrmI | AGTACT | 1 cut(s) | 223 |