Prupe.6G266700_v2.0.a1

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000638
Physical Location & Seq
Reverse (-)
25484451 .. 25485365
915 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G266700.1

Sequence Viewer

Length: 915 bp
ATGACTGTGGAAATTACTGGAGTCCCCGGAATGGAAGGCCTTTTGTATCGTCAAGACTTGCCAGGTTTTTGCCTAGTCAAACAAGCTAACCACCCAACTCTTCAATTCTTTATCAACGAGTGCCAAATCCTAAAACGAGCCTCGGCTCTCATTCTCGACACAGTTTCTGAGCTCGATGCTCAAATCCTCTCCCACATGGCCCCCATATTTTCCAAGATTTACACCCTCGGACCACTCCACGCTCTCCTCAACTCCCAAATAGGTGATGTGTCCCGAGGTCTAGCATCTCACGGCTCTCTTTGGAAAAGCGACCTAAACTGCATGACGTGGCTTGACTCCCAGCCATCCAAATCAGTTATCTACGTCAGCTTCGGGACTTTGGTCCACTTGACACGTGCCCAGGTGATAGAGTTTTGGTACGGCCTGGTCAACAGTGGACACCCATTCTTGTGGGTCATGAGGTCCGACATCACATCTGGGGACCACCAAATTCCCACAGAGCTGGAAAAGGGTACGAAAGAAAGAGGGTACGTAGTGGATTGGGTTTCGCAGGAGGAGGTGCTGGCCCACAAATCGGTAGGTGGGTTTTTGACCCACAGTGGGTGGAACTCGACGCTTGAAAGCATTGTGGCCGGGCTGCCCATGATCTCTTGGCCGAAGTTTGGGGACCATTATATTATTAGCAGAACTGTTTGCCAGCAGTGGAAGATTGGTCTCCAATTGAATGAAAATTGTGACCGGTCCAACATTGAGAGCATGGTACAAACTTTGATGGGACCCAAAGGGGAGGAGATCCAGAGCTCCATGGATGCCATTTCGAAATTGGCTCGTGACAGTGTTGCCGAAGGTGGATCTTCTCACAACAACTTGGAGCAGCTGATCGAATACATTAGAAATTTGCAACACCAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

305

Amino Acids

33.92

Weight (kDa)

5.71

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000638)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g19301 FvH4_6g12520 FvH4_6g12520 FvH4_6g12550 FvH4_6g12560 FvH4_6g12580
malus_domestica MD04G1140700.v1.1 MD04G1141300.v1.1 MD04G1141400.v1.1 MD04G1141500.v1.1 MD12G1156200.v1.1
prunus_persica Prupe.6G265900_v2.0.a1 Prupe.6G266600_v2.0.a1 Prupe.6G266700_v2.0.a1 Prupe.6G266900_v2.0.a1 Prupe.6G267000_v2.0.a1
pyrus_communis pycom04g12860
rosa_chinensis RchiOBHm_Chr2g0160211 RchiOBHm_Chr3g0464331 RchiOBHm_Chr3g0464341 RchiOBHm_Chr3g0464361 RchiOBHm_Chr3g0464371 RchiOBHm_Chr3g0464421 RchiOBHm_Chr3g0464441
rosa_laevigata RLG00000001199 RLG00000007070 RLG00000015964 RLG00000020699 RLG00000024697 RLG00000024699 RLG00000024701 RLG00000024702 RLG00000024703 RLG00000024705 RLG00000027329 RLG00000034971 RLG00000035066
rosa_multiflora Rmu_sc0003074.1_g000014 Rmu_sc0003074.1_g000020 Rmu_sc0003074.1_g000024 Rmu_sc0003074.1_g000025 Rmu_sc0003074.1_g000027 Rmu_sc0003074.1_g000029 Rmu_sc0039307.1_g000001
rosa_roxburghii Rroxscaffold_1G00025190 Rroxscaffold_2G00078980 Rroxscaffold_6G00415680 Rroxscaffold_6G00415710 Rroxscaffold_6G00415740 Rroxscaffold_6G00415770 Rroxscaffold_6G00415800
rosa_rugosa Rorug03G0071500 Rorug03G0071700 Rorug03G0071800 Rorug03G0072300
rosa_samantha Rh3BG133600 Rh3BG133700 Rh3BG133800 Rh3BG133900 Rh3BG134100 Rh3BG134200 Rh3CG135900 Rh3CG136100 Rh3CG136200 Rh3CG136300 Rh3CG136600 Rh3DG135100 Rh3DG135200 Rh3DG135300 Rh3DG135400 Rh3DG135600 Rh4BG384400 Rh5CG268300
rosa_wichuraiana Rw3G010950 Rw3G010960 Rw3G010970 Rw3G010980 Rw3G012210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 787, 859
AcoI YGGCCR 2 cut(s) 630, 653
AcsI RAATTY 2 cut(s) 489, 895
AcvI CACGTG 1 cut(s) 395
AfaI GTAC 4 cut(s) 419, 514, 530, 762
AfiI CCNNNNNNNGG 4 cut(s) 31, 574, 600, 662
AflIII ACRYGT 1 cut(s) 392
AgeI ACCGGT 1 cut(s) 738
AgsI TTSAA 3 cut(s) 104, 620, 724
AjiI CACGTC 1 cut(s) 327
AjnI CCWGG 3 cut(s) 61, 399, 423
AluBI AGCT 6 cut(s) 86, 172, 369, 502, 801, 877
AluI AGCT 6 cut(s) 86, 172, 369, 502, 801, 877
Alw21I GWGCWC 2 cut(s) 174, 803
Alw26I GTCTC 1 cut(s) 719
AlwI GGATC 2 cut(s) 787, 859
AlwNI CAGNNNCTG 1 cut(s) 167
Ama87I CYCGRG 1 cut(s) 273
AoxI GGCC 6 cut(s) 37, 198, 421, 564, 630, 653
ApeKI GCWGC 2 cut(s) 637, 874
ApoI RAATTY 2 cut(s) 489, 895
AsiGI ACCGGT 1 cut(s) 738
AspS9I GGNCC 9 cut(s) 199, 230, 382, 462, 481, 565, 667, 741, 776
AsuC2I CCSGG 2 cut(s) 27, 634
AsuHPI GGTGA 2 cut(s) 275, 415
AsuII TTCGAA 1 cut(s) 818
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 7 cut(s) 230, 382, 462, 481, 667, 741, 776
BaeGI GKGCMC 1 cut(s) 400
BanII GRGCYC 2 cut(s) 174, 803
BauI CACGAG 1 cut(s) 828
BbrPI CACGTG 1 cut(s) 395
Bbv12I GWGCWC 2 cut(s) 174, 803
BbvI GCAGC 2 cut(s) 624, 886
BccI CCATC 2 cut(s) 352, 766
BceAI ACGGC 2 cut(s) 307, 436
BciT130I CCWGG 3 cut(s) 63, 401, 425
BcnI CCSGG 2 cut(s) 27, 634
BcoDI GTCTC 1 cut(s) 719
BfaI CTAG 3 cut(s) 74, 281, 913
BisI GCNGC 2 cut(s) 638, 875
BlsI GCNGC 2 cut(s) 639, 876
Bme1390I CCNGG 5 cut(s) 27, 63, 401, 425, 634
Bme18I GGWCC 7 cut(s) 230, 382, 462, 481, 667, 741, 776
BmeT110I CYCGRG 1 cut(s) 273
BmgBI CACGTC 1 cut(s) 327
BmgT120I GGNCC 9 cut(s) 199, 230, 382, 462, 481, 565, 667, 741, 776
BmiI GGNNCC 5 cut(s) 201, 482, 668, 777, 778
BmrFI CCNGG 5 cut(s) 27, 63, 401, 425, 634
BmsI GCATC 3 cut(s) 166, 293, 799
BoxI GACNNNNGTC 1 cut(s) 380
BpmI CTGGAG 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 818
BpuMI CCSGG 2 cut(s) 27, 634
BsaAI YACGTR 2 cut(s) 395, 532
BsaI GGTCTC 1 cut(s) 719
BsaJI CCNNGG 6 cut(s) 25, 141, 226, 274, 399, 804
BsaWI WCCGGW 1 cut(s) 738
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 574, 600, 662
Bse118I RCCGGY 1 cut(s) 738
Bse1I ACTGG 1 cut(s) 22
BseBI CCWGG 3 cut(s) 63, 401, 425
BseDI CCNNGG 6 cut(s) 25, 141, 226, 274, 399, 804
BseGI GGATG 2 cut(s) 344, 814
BseLI CCNNNNNNNGG 4 cut(s) 31, 574, 600, 662
BseMII CTCAG 1 cut(s) 159
BseNI ACTGG 1 cut(s) 22
BseRI GAGGAG 3 cut(s) 236, 569, 803
BseSI GKGCMC 1 cut(s) 400
BseXI GCAGC 2 cut(s) 624, 886
BseYI CCCAGC 1 cut(s) 339
BshFI GGCC 6 cut(s) 39, 200, 423, 566, 632, 655
BshTI ACCGGT 1 cut(s) 738
BsiHKAI GWGCWC 2 cut(s) 174, 803
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 3 cut(s) 27, 633, 739
BslFI GGGAC 6 cut(s) 8, 256, 388, 494, 680, 789
BslI CCNNNNNNNGG 4 cut(s) 31, 574, 600, 662
BsmAI GTCTC 1 cut(s) 719
BsmFI GGGAC 6 cut(s) 8, 256, 388, 494, 680, 789
BsnI GGCC 6 cut(s) 39, 200, 423, 566, 632, 655
Bso31I GGTCTC 1 cut(s) 719
BsoBI CYCGRG 1 cut(s) 273
Bsp119I TTCGAA 1 cut(s) 818
Bsp1286I GDGCHC 3 cut(s) 174, 400, 803
Bsp143I GATC 4 cut(s) 645, 792, 851, 879
Bsp19I CCATGG 1 cut(s) 804
BspANI GGCC 6 cut(s) 39, 200, 423, 566, 632, 655
BspCNI CTCAG 1 cut(s) 160
BspHI TCATGA 1 cut(s) 456
BspLI GGNNCC 5 cut(s) 201, 482, 668, 777, 778
BspPI GGATC 2 cut(s) 787, 859
BspT104I TTCGAA 1 cut(s) 818
BspTNI GGTCTC 1 cut(s) 719
BsrFI RCCGGY 1 cut(s) 738
BsrI ACTGG 1 cut(s) 22
BssAI RCCGGY 1 cut(s) 738
BssECI CCNNGG 6 cut(s) 25, 141, 226, 274, 399, 804
BssMI GATC 4 cut(s) 645, 792, 851, 879
BssSI CACGAG 1 cut(s) 828
BssT1I CCWWGG 1 cut(s) 804
Bst2BI CACGAG 1 cut(s) 828
Bst2UI CCWGG 3 cut(s) 63, 401, 425
Bst4CI ACNGT 6 cut(s) 7, 163, 434, 599, 691, 836
Bst6I CTCTTC 1 cut(s) 105
BstBAI YACGTR 2 cut(s) 395, 532
BstBI TTCGAA 1 cut(s) 818
BstC8I GCNNGC 2 cut(s) 564, 698
BstDEI CTNAG 1 cut(s) 168
BstDSI CCRYGG 1 cut(s) 804
BstF5I GGATG 2 cut(s) 344, 814
BstKTI GATC 4 cut(s) 648, 795, 854, 882
BstMAI GTCTC 1 cut(s) 719
BstMBI GATC 4 cut(s) 645, 792, 851, 879
BstNI CCWGG 3 cut(s) 63, 401, 425
BstPAI GACNNNNGTC 1 cut(s) 380
BstSCI CCNGG 5 cut(s) 25, 61, 399, 423, 632
BstSLI GKGCMC 1 cut(s) 400
BstSNI TACGTA 1 cut(s) 532
BstV1I GCAGC 2 cut(s) 624, 886
BstX2I RGATCY 2 cut(s) 792, 851
BstXI CCANNNNNNTGG 2 cut(s) 450, 502
BstYI RGATCY 2 cut(s) 792, 851
BsuRI GGCC 6 cut(s) 39, 200, 423, 566, 632, 655
BtgI CCRYGG 1 cut(s) 804
BtrI CACGTC 1 cut(s) 327
BtsCI GGATG 2 cut(s) 344, 814
BtsI GCAGTG 1 cut(s) 707
BtsIMutI CAGTG 4 cut(s) 439, 604, 707, 841
Cac8I GCNNGC 2 cut(s) 564, 698
CaiI CAGNNNCTG 1 cut(s) 167
CciI TCATGA 1 cut(s) 456
Cfr10I RCCGGY 1 cut(s) 738
Cfr13I GGNCC 9 cut(s) 199, 230, 382, 462, 481, 565, 667, 741, 776
CseI GACGC 1 cut(s) 622
Csp6I GTAC 4 cut(s) 418, 513, 529, 761
CspAI ACCGGT 1 cut(s) 738
CviAII CATG 6 cut(s) 196, 322, 457, 643, 757, 805
CviQI GTAC 4 cut(s) 418, 513, 529, 761
DdeI CTNAG 1 cut(s) 168
DpnI GATC 4 cut(s) 647, 794, 853, 881
DpnII GATC 4 cut(s) 645, 792, 851, 879
EaeI YGGCCR 2 cut(s) 630, 653
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
Ecl136II GAGCTC 2 cut(s) 172, 801
Eco105I TACGTA 1 cut(s) 532
Eco130I CCWWGG 1 cut(s) 804
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 2 cut(s) 174, 803
Eco31I GGTCTC 1 cut(s) 719
Eco47I GGWCC 7 cut(s) 230, 382, 462, 481, 667, 741, 776
Eco53kI GAGCTC 2 cut(s) 172, 801
Eco72I CACGTG 1 cut(s) 395
Eco88I CYCGRG 1 cut(s) 273
EcoICRI GAGCTC 2 cut(s) 172, 801
EcoO109I RGGNCCY 1 cut(s) 776
EcoRII CCWGG 3 cut(s) 61, 399, 423
EcoT14I CCWWGG 1 cut(s) 804
EcoT38I GRGCYC 2 cut(s) 174, 803
ErhI CCWWGG 1 cut(s) 804
FaeI CATG 6 cut(s) 199, 325, 460, 646, 760, 808
FaiI YATR 8 cut(s) 197, 206, 323, 458, 644, 675, 758, 806
FaqI GGGAC 6 cut(s) 8, 256, 388, 494, 680, 789
FatI CATG 6 cut(s) 195, 321, 456, 642, 756, 804
Fnu4HI GCNGC 2 cut(s) 638, 875
FokI GGATG 2 cut(s) 331, 821
FriOI GRGCYC 2 cut(s) 174, 803
Fsp4HI GCNGC 2 cut(s) 638, 875
FspBI CTAG 3 cut(s) 74, 281, 913
GluI GCNGC 2 cut(s) 638, 875
GsaI CCCAGC 1 cut(s) 343
GsuI CTGGAG 1 cut(s) 39
HaeIII GGCC 6 cut(s) 39, 200, 423, 566, 632, 655
HapII CCGG 3 cut(s) 27, 633, 739
HgaI GACGC 1 cut(s) 622
Hin1II CATG 6 cut(s) 199, 325, 460, 646, 760, 808
HincII GTYRAC 1 cut(s) 430
HindII GTYRAC 1 cut(s) 430
HinfI GANTC 2 cut(s) 21, 335
HpaII CCGG 3 cut(s) 27, 633, 739
HphI GGTGA 2 cut(s) 275, 415
Hpy166II GTNNAC 3 cut(s) 385, 430, 437
Hpy188I TCNGA 3 cut(s) 169, 230, 466
Hpy188III TCNNGA 7 cut(s) 53, 155, 273, 373, 457, 796, 830
Hpy8I GTNNAC 3 cut(s) 385, 430, 437
Hpy99I CGWCG 1 cut(s) 616
HpyAV CCTTC 2 cut(s) 29, 839
HpyCH4III ACNGT 6 cut(s) 7, 163, 434, 599, 691, 836
HpyCH4IV ACGT 4 cut(s) 326, 363, 394, 531
HpyCH4V TGCA 2 cut(s) 321, 901
HpyF3I CTNAG 1 cut(s) 168
HpySE526I ACGT 4 cut(s) 326, 363, 394, 531
Hsp92II CATG 6 cut(s) 199, 325, 460, 646, 760, 808
KflI GGGWCCC 1 cut(s) 776
Kzo9I GATC 4 cut(s) 645, 792, 851, 879
LmnI GCTCC 2 cut(s) 806, 871
Lsp1109I GCAGC 2 cut(s) 624, 886
LweI GCATC 3 cut(s) 166, 293, 799
MaeI CTAG 3 cut(s) 74, 281, 913
MaeII ACGT 4 cut(s) 326, 363, 394, 531
MaeIII GTNAC 2 cut(s) 734, 830
MalI GATC 4 cut(s) 647, 794, 853, 881
MboI GATC 4 cut(s) 645, 792, 851, 879
MboII GAAGA 3 cut(s) 92, 718, 846
MfeI CAATTG 1 cut(s) 719
MflI RGATCY 2 cut(s) 792, 851
MhlI GDGCHC 3 cut(s) 174, 400, 803
MluCI AATT 7 cut(s) 12, 104, 489, 719, 730, 821, 895
MlyI GAGTC 2 cut(s) 30, 329
MmeI TCCRAC 2 cut(s) 489, 768
MslI CAYNNNNRTG 1 cut(s) 448
MspA1I CMGCKG 1 cut(s) 877
MspI CCGG 3 cut(s) 27, 633, 739
MspR9I CCNGG 5 cut(s) 27, 63, 401, 425, 634
MunI CAATTG 1 cut(s) 719
MvaI CCWGG 3 cut(s) 63, 401, 425
NciI CCSGG 2 cut(s) 27, 634
NcoI CCATGG 1 cut(s) 804
NdeII GATC 4 cut(s) 645, 792, 851, 879
NlaIII CATG 6 cut(s) 199, 325, 460, 646, 760, 808
NlaIV GGNNCC 5 cut(s) 201, 482, 668, 777, 778
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 734, 830
NspV TTCGAA 1 cut(s) 818
PagI TCATGA 1 cut(s) 456
PceI AGGCCT 1 cut(s) 39
PinAI ACCGGT 1 cut(s) 738
PkrI GCNGC 2 cut(s) 639, 876
PleI GAGTC 2 cut(s) 29, 329
PmaCI CACGTG 1 cut(s) 395
PmlI CACGTG 1 cut(s) 395
PpsI GAGTC 2 cut(s) 29, 329
Ppu21I YACGTR 2 cut(s) 395, 532
PpuMI RGGWCCY 1 cut(s) 776
PshAI GACNNNNGTC 1 cut(s) 380
Psp124BI GAGCTC 2 cut(s) 174, 803
Psp5II RGGWCCY 1 cut(s) 776
Psp6I CCWGG 3 cut(s) 61, 399, 423
PspCI CACGTG 1 cut(s) 395
PspFI CCCAGC 1 cut(s) 339
PspGI CCWGG 3 cut(s) 61, 399, 423
PspN4I GGNNCC 5 cut(s) 201, 482, 668, 777, 778
PspPI GGNCC 9 cut(s) 199, 230, 382, 462, 481, 565, 667, 741, 776
PspPPI RGGWCCY 1 cut(s) 776
PstNI CAGNNNCTG 1 cut(s) 167
PsuI RGATCY 2 cut(s) 792, 851
PvuII CAGCTG 1 cut(s) 877
RsaI GTAC 4 cut(s) 419, 514, 530, 762
RsaNI GTAC 4 cut(s) 418, 513, 529, 761
RseI CAYNNNNRTG 1 cut(s) 448
SacI GAGCTC 2 cut(s) 174, 803
SatI GCNGC 2 cut(s) 638, 875
Sau3AI GATC 4 cut(s) 645, 792, 851, 879
Sau96I GGNCC 9 cut(s) 199, 230, 382, 462, 481, 565, 667, 741, 776
SchI GAGTC 2 cut(s) 30, 329
ScrFI CCNGG 5 cut(s) 27, 63, 401, 425, 634
SduI GDGCHC 3 cut(s) 174, 400, 803
SfaNI GCATC 3 cut(s) 166, 293, 799
SfuI TTCGAA 1 cut(s) 818
SinI GGWCC 7 cut(s) 230, 382, 462, 481, 667, 741, 776
SmiMI CAYNNNNRTG 1 cut(s) 448
SnaBI TACGTA 1 cut(s) 532
Sse9I AATT 7 cut(s) 12, 104, 489, 719, 730, 821, 895
SseBI AGGCCT 1 cut(s) 39
SspMI CTAG 3 cut(s) 74, 281, 913
SstI GAGCTC 2 cut(s) 174, 803
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 5 cut(s) 25, 61, 399, 423, 632
StyI CCWWGG 1 cut(s) 804
TaaI ACNGT 6 cut(s) 7, 163, 434, 599, 691, 836
TaiI ACGT 4 cut(s) 329, 366, 397, 534
TaqI TCGA 5 cut(s) 156, 174, 611, 818, 882
TasI AATT 7 cut(s) 12, 104, 489, 719, 730, 821, 895
TscAI CASTG 4 cut(s) 439, 604, 707, 841
TseFI GTSAC 2 cut(s) 734, 830
TseI GCWGC 2 cut(s) 637, 874
Tsp45I GTSAC 2 cut(s) 734, 830
TspDTI ATGAA 1 cut(s) 741
TspRI CASTG 4 cut(s) 439, 604, 707, 841
VpaK11BI GGWCC 7 cut(s) 230, 382, 462, 481, 667, 741, 776
XapI RAATTY 2 cut(s) 489, 895
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XspI CTAG 3 cut(s) 74, 281, 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.