MD04G1196400.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
28477633 .. 28483247
5615 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1196400.v1.1.491

Sequence Viewer

Length: 3051 bp
ATGGCGACGGAGCAAGTGTTGCCGTTCTCCATAACTTCTGTGGTTGAATGCGTTCTTCAGGAGCATGGGAGTCGTCTGAGCGATATCGACTTGGCTTCCAGGAAGGCCGAGGAAGCATCCTTGAGAAGGTATGAAGCAGCGAGGTGGCTACGAAAGACGGTTGGCGTTGTGGGGGGTAAAGATTTGCCGGCTGAGCCTTCCGAAGAAGATTTCCGGCTTGGATTGCGGAGTGGAATAATCCTTTGCAATGTTCTTAACAAGGTTCAACCCGGAGCTGTGCCAAAGGTAGTTGAAGGCCCTTGTGACTCCGTTATTATTCCCGATGGGGCAGCTCTATCAGCGTATCAGTACTTCGAAAATGTCAGAAACTTCCGTGTGGCTGTGGAGGAAATGGGGCTTCCAACCTTTGAAGCTTCCGATTTGGAACAGGGAGGGAAATCTGCGAGGATTGTCAACTGCGTTCTAGCATTGAAATCATATTACGAGTGGAAACAAGGAGGTGGAATTGGATCATGGAAGTATGGTGGAGCTTTGAAACCACCTGCCTGCGGGAAATACTTCTTGCGGAAAAATTCAGAACCCTTTTCGAGGACCTTATCATGGGGCGAAAAGTCACACGAAAGTTTGTCCTGTGAAGATCTCTATGAAGCAAGTTCCTCTCATTCTTTACATGCGCTAGTATGTGAAGTGCTTTCGGACAAGAGGCAAGAAGACATACCAATCATTGTGGAAAATTTGCTGAGTAAAGTCATGGAGGAGTTTGAGCATCGGTTAGCAAGCCAAGGCGAACCGACTGAAGAGAAAGCTGCCTCCGAAACCAAAGAGGAGGAAATATACAACCATGAAGAGGGATCAAAAAGTCAGTCTCTAAAGCAGATAACGTTGGTTGACCGACAACAGAAAGATATTCAGGAACTGAAACATACTCTATACGATACAAAAGCAGGAATGAAGCTTCTACAAATGAGGTACCGGCAGGAGTTCAACAACCTAGGCAAGCACCTCCATGGTTTGGCTTCTGCAGCAACAGGATACCAGAAGGTTCTTGAAGAAAATCGCAAGTTATACAATCAAGTGCAGGATTTGAAAGGTAATATAAGGGTATACTGTCGAGTGCGGCCCTTCTTGCCTGGGCAATCAAACCGGGCCAGTAGCTATGATCACATAGATGATAGAAGTCTTAAGATTATCACACCTTCCAAATATGGCAAAGAGGGAAGGAAATCTTTCACTTTCAACAAAGTTTTTGGTCCTTTTTCAACCCAAGAGGAGGTATTTTCAGACACGCAGCCTCTCATTCGGTCTGTTCTCGATGGTTACAATGTCTGTATATTTGCTTATGGCCAAACGGGATCAGGGAAAACTTTTACAATGACTGGACCGAAAGATATTACAGAGGAAAGTCAAGGTGTAAATTACAGAGCACTCAGTGATTTATTTTATCTATCAGAACAGAGAAAGGACACCATTTGTTATGAAATTTCTGTTCAGATGCTTGAAATTTACAATGAGCAAGTCAAGGATCTCCTGGCGGTGGAGGGTTCTAGCAAACGATATCCTTCTAGAAATGCATATCATATTCATGTGTTTCCTAAACTCCAACATACATTAGAAATTCGCAACAGTTCTCAAAACGGAATTAATGTACCTGAGGCGAACCTTGTTCCTGTATCATCGACATCTGATGTTATATATTTGATGAACCTTGGGCATAAGAATCGTTCAGTGAGTGCAACAGCCATGAATGACCGGAGTAGTAGATCGCACAGTTGCTTGACAGTTCATGTTCATGGAAGAGACCTGACATCGGGAAGCATTCTCCGGGGTTGTATGCATCTAGTTGACTTGGCAGGAAGTGAGAGAGTTGACAAATCTGAGGTGACGGGAGACAGATTAAAGGAGGCACAACATATTAACAAATCTCTCTCAGCTTTAGGAGATGTCATTGCCTCTCTTGCTCAAAAGAACGCACACGTTCCTTACAGAAACAGTAAGCTCACACAGCTGCTCCAAGACTCGCTCGGAGGGCAAGCGAAGACGCTCATGTTTGTTCATATCAGCCCTGAGCCTGACTCTCTCGGAGAAACACTTAGTACACTCAAGTTTGCAGAAAGGGTTTCTACAGTTGAACTTGGTGCCGCCCGAGTTAACAAAGACAGTGCAGATGTAAAAGAGCTCAAAGAACAGATTGCTACACTTAAGGCAGCCTTAGCAAGGAAGGAAAGCGAGGGAGCGCAAGCGCAACTTAAATATTCTCAATCCATGAGCCCAGAAAGATCCAGAATCAAGTCTGCTGGGTCTTCCCCTTTGCATTCTAATTGGAAAAGCACCGGAGATTTGTCCGGGGCTTCCATGCAAGCAGCAGATGATTTTGGAAACATAGAGGTTCGCAAATTTTCTGCATTGAAGCCAAAAAGGCGAAGTTTAGATCTTCAAGATATGATGACACAAGGGCGTTCGCCTCCCTGGCCACCCGCTAATAATGAAGGACTAAATGTAAAGGAGGAAGCCGATAAGGATTCAGTACTCTCTGGAGATTGGGTTGATAAGGTCATGGTGAACAAACATGAAGGTGCAAATAGAGAAGAGAATCTATTAGGAAGTTGGGATATGGACAACAGACAGTTGCCGGAGATGTTTGGTCCAAGTAGCCTCCCTGACCCTCCGAAGTTATACATGGAACCACATTTTGGAAAGTTAACAGCGAGCAAGGAGGACAGCCCAGACTATGATGCACAAAGGAGTCGGAATGAGATGGCCAACACCGATGACTCTGATGATCAACTTGATGCTGCAACTAGTGATTGTTCAGAGCCAGACATGCTTTGGCAACAAAACCTTCCGAAACCTACCTGCATTCCAAATGGACAGGGATCAAAAGCGAAGAAAACTAATTCAAGGCCAATAAGGAGCCCGGAAACTAGGAGCATGATTCCATCATTGATTCCTTCACCATCACGGAAACCACCCAATGGGGTGAGCCAGCCTCTGCACAGGACCGCAAGTGGAAGGATCGGTGAAGGGAAGCGAAGACCTGGGAGTGCAAAGTAA

Protein Analysis

1017

Amino Acids

112.79

Weight (kDa)

6.82

Isoelectric Point (pI)

52.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CH PF00307 43 - 162 2e-12 Calponin homology (CH) domain
Microtub_bd PF16796 350 - 510 1.1e-44 Microtubule binding
Kinesin PF00225 371 - 708 2.3e-108 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 550
Acc36I ACCTGC 2 cut(s) 550, 2861
Acc65I GGTACC 1 cut(s) 969
AccB1I GGYRCC 2 cut(s) 969, 2135
AccB7I CCANNNNNTGG 3 cut(s) 1012, 2690, 2972
AccI GTMKAC 1 cut(s) 1104
AciI CCGC 8 cut(s) 226, 549, 565, 1117, 1532, 2139, 2475, 3000
AclI AACGTT 1 cut(s) 881
AclWI GGATC 7 cut(s) 517, 859, 1360, 1530, 2271, 2881, 3020
AcoI YGGCCR 3 cut(s) 1342, 2468, 2757
AcsI RAATTY 6 cut(s) 571, 733, 1479, 1500, 1614, 2393
AcuI CTGAAG 2 cut(s) 41, 816
AdeI CACNNNGTG 1 cut(s) 1430
AfaI GTAC 5 cut(s) 350, 971, 1647, 2095, 2526
AflII CTTAAG 2 cut(s) 1181, 2198
AflIII ACRYGT 1 cut(s) 1972
AhlI ACTAGT 1 cut(s) 2798
AjnI CCWGG 5 cut(s) 98, 1129, 1527, 2465, 3034
AjuI GAANNNNNNNTTGG 2 cut(s) 2673, 2705
Alw21I GWGCWC 2 cut(s) 1426, 2178
Alw26I GTCTC 3 cut(s) 870, 1791, 1881
AlwI GGATC 7 cut(s) 517, 859, 1360, 1530, 2271, 2881, 3020
AlwNI CAGNNNCTG 2 cut(s) 916, 2989
Ama87I CYCGRG 1 cut(s) 2142
AoxI GGCC 8 cut(s) 105, 295, 1118, 1146, 1342, 2468, 2757, 2900
ApeKI GCWGC 9 cut(s) 137, 329, 806, 1022, 1288, 2005, 2204, 2360, 2792
ApoI RAATTY 6 cut(s) 571, 733, 1479, 1500, 1614, 2393
ArsI GACNNNNNNTTYG 2 cut(s) 848, 880
AseI ATTAAT 1 cut(s) 1641
Asp700I GAANNNNTTC 3 cut(s) 51, 557, 1226
Asp718I GGTACC 1 cut(s) 969
AspA2I CCTAGG 1 cut(s) 991
AspLEI GCGC 3 cut(s) 676, 2236, 2242
AspS9I GGNCC 8 cut(s) 296, 591, 1119, 1146, 1250, 1379, 2642, 2997
AsuC2I CCSGG 5 cut(s) 270, 1145, 1823, 2344, 2915
AsuHPI GGTGA 5 cut(s) 1891, 2569, 2943, 2989, 3029
AsuII TTCGAA 1 cut(s) 354
AvaI CYCGRG 1 cut(s) 2142
AvaII GGWCC 5 cut(s) 591, 1250, 1379, 2642, 2997
AvrII CCTAGG 1 cut(s) 991
AxyI CCTNAGG 1 cut(s) 1650
BalI TGGCCA 3 cut(s) 1344, 2470, 2759
BanI GGYRCC 2 cut(s) 969, 2135
BanII GRGCYC 3 cut(s) 2178, 2270, 2915
BarI GAAGNNNNNNTAC 2 cut(s) 335, 367
BbsI GAAGAC 4 cut(s) 717, 2042, 2292, 3037
Bbv12I GWGCWC 2 cut(s) 1426, 2178
BbvI GCAGC 9 cut(s) 149, 341, 793, 1034, 1300, 1992, 2216, 2372, 2779
BccI CCATC 5 cut(s) 317, 1307, 2749, 2944, 2962
BceAI ACGGC 1 cut(s) 7
BcgI CGANNNNNNTGC 4 cut(s) 53, 87, 1700, 1734
BciT130I CCWGG 5 cut(s) 100, 1131, 1529, 2467, 3036
BciVI GTATCC 1 cut(s) 1025
BclI TGATCA 2 cut(s) 1159, 2779
BcnI CCSGG 5 cut(s) 270, 1145, 1823, 2344, 2915
BcoDI GTCTC 3 cut(s) 870, 1791, 1881
BcuI ACTAGT 1 cut(s) 2798
BfaI CTAG 8 cut(s) 464, 677, 992, 1545, 1563, 1838, 2799, 2922
BfmI CTRYAG 2 cut(s) 1020, 2121
BfrI CTTAAG 2 cut(s) 1181, 2198
BfuAI ACCTGC 2 cut(s) 550, 2861
BfuI GTATCC 1 cut(s) 1025
BglI GCCNNNNNGGC 2 cut(s) 2416, 2467
BglII AGATCT 2 cut(s) 637, 2428
BlnI CCTAGG 1 cut(s) 991
BlpI GCTNAGC 1 cut(s) 192
BmcAI AGTACT 2 cut(s) 350, 2526
Bme18I GGWCC 5 cut(s) 591, 1250, 1379, 2642, 2997
BmeT110I CYCGRG 1 cut(s) 2142
BmgT120I GGNCC 8 cut(s) 296, 591, 1119, 1146, 1250, 1379, 2642, 2997
BmiI GGNNCC 4 cut(s) 971, 2137, 2682, 2912
BmsI GCATC 6 cut(s) 125, 775, 1482, 1843, 2722, 2779
BpiI GAAGAC 4 cut(s) 717, 2042, 2292, 3037
BplI GAGNNNNNCTC 4 cut(s) 2057, 2089, 2971, 3003
BpmI CTGGAG 1 cut(s) 2553
Bpu10I CCTNAGC 2 cut(s) 2064, 2209
Bpu1102I GCTNAGC 1 cut(s) 192
Bpu14I TTCGAA 1 cut(s) 354
BpuEI CTTGAG 2 cut(s) 142, 2084
BpuMI CCSGG 5 cut(s) 270, 1145, 1823, 2344, 2915
BsaI GGTCTC 1 cut(s) 1791
BsaWI WCCGGW 2 cut(s) 1749, 2330
BsaXI ACNNNNNCTCC 5 cut(s) 32, 1992, 2022, 2526, 2556
Bse118I RCCGGY 2 cut(s) 187, 972
Bse1I ACTGG 2 cut(s) 1149, 1381
Bse21I CCTNAGG 1 cut(s) 1650
Bse3DI GCAATG 2 cut(s) 253, 1944
BseBI CCWGG 5 cut(s) 100, 1131, 1529, 2467, 3036
BseGI GGATG 1 cut(s) 116
BseMI GCAATG 2 cut(s) 253, 1944
BseMII CTCAG 8 cut(s) 68, 183, 731, 1441, 1641, 1866, 1941, 2055
BseNI ACTGG 2 cut(s) 1149, 1381
BseRI GAGGAG 3 cut(s) 770, 839, 1283
BseXI GCAGC 9 cut(s) 149, 341, 793, 1034, 1300, 1992, 2216, 2372, 2779
BseYI CCCAGC 1 cut(s) 2294
BsgI GTGCAG 3 cut(s) 1097, 2181, 2975
BshFI GGCC 8 cut(s) 107, 297, 1120, 1148, 1344, 2470, 2759, 2902
BshNI GGYRCC 2 cut(s) 969, 2135
BsiHKAI GWGCWC 2 cut(s) 1426, 2178
BsiHKCI CYCGRG 1 cut(s) 2142
BsmAI GTCTC 3 cut(s) 870, 1791, 1881
BsmI GAATGC 4 cut(s) 53, 1815, 2311, 2856
BsnI GGCC 8 cut(s) 107, 297, 1120, 1148, 1344, 2470, 2759, 2902
Bso31I GGTCTC 1 cut(s) 1791
BsoBI CYCGRG 1 cut(s) 2142
Bsp119I TTCGAA 1 cut(s) 354
Bsp1286I GDGCHC 4 cut(s) 1426, 2178, 2270, 2915
Bsp1720I GCTNAGC 1 cut(s) 192
Bsp19I CCATGG 1 cut(s) 1006
BspACI CCGC 8 cut(s) 226, 549, 565, 1117, 1532, 2139, 2475, 3000
BspANI GGCC 8 cut(s) 107, 297, 1120, 1148, 1344, 2470, 2759, 2902
BspCNI CTCAG 8 cut(s) 69, 184, 732, 1440, 1642, 1867, 1940, 2056
BspLI GGNNCC 4 cut(s) 971, 2137, 2682, 2912
BspMAI CTGCAG 1 cut(s) 1024
BspMI ACCTGC 2 cut(s) 550, 2861
BspPI GGATC 7 cut(s) 517, 859, 1360, 1530, 2271, 2881, 3020
BspT104I TTCGAA 1 cut(s) 354
BspT107I GGYRCC 2 cut(s) 969, 2135
BspTI CTTAAG 2 cut(s) 1181, 2198
BspTNI GGTCTC 1 cut(s) 1791
BsrDI GCAATG 2 cut(s) 253, 1944
BsrFI RCCGGY 2 cut(s) 187, 972
BsrI ACTGG 2 cut(s) 1149, 1381
BssAI RCCGGY 2 cut(s) 187, 972
BssNAI GTATAC 1 cut(s) 1105
BssT1I CCWWGG 4 cut(s) 781, 991, 1006, 1705
Bst1107I GTATAC 1 cut(s) 1105
Bst2UI CCWGG 5 cut(s) 100, 1131, 1529, 2467, 3036
Bst4CI ACNGT 9 cut(s) 160, 1109, 1625, 1769, 1780, 1991, 2125, 2159, 2625
Bst6I CTCTTC 4 cut(s) 792, 840, 1789, 2580
BstAFI CTTAAG 2 cut(s) 1181, 2198
BstAPI GCANNNNNTGC 1 cut(s) 19
BstBI TTCGAA 1 cut(s) 354
BstC8I GCNNGC 9 cut(s) 189, 547, 778, 998, 2031, 2238, 2358, 2707, 2984
BstDSI CCRYGG 1 cut(s) 1006
BstENI CCTNNNNNAGG 3 cut(s) 124, 586, 2212
BstF5I GGATG 1 cut(s) 116
BstHHI GCGC 3 cut(s) 676, 2236, 2242
BstMAI GTCTC 3 cut(s) 870, 1791, 1881
BstNI CCWGG 5 cut(s) 100, 1131, 1529, 2467, 3036
BstNSI RCATGY 2 cut(s) 674, 2824
BstSFI CTRYAG 2 cut(s) 1020, 2121
BstV1I GCAGC 9 cut(s) 149, 341, 793, 1034, 1300, 1992, 2216, 2372, 2779
BstV2I GAAGAC 4 cut(s) 717, 2042, 2292, 3037
BstX2I RGATCY 4 cut(s) 637, 1522, 2276, 2428
BstYI RGATCY 4 cut(s) 637, 1522, 2276, 2428
BstZ17I GTATAC 1 cut(s) 1105
Bsu36I CCTNAGG 1 cut(s) 1650
BsuI GTATCC 1 cut(s) 1025
BsuRI GGCC 8 cut(s) 107, 297, 1120, 1148, 1344, 2470, 2759, 2902
BtgI CCRYGG 1 cut(s) 1006
BtsCI GGATG 1 cut(s) 116
BtsIMutI CAGTG 3 cut(s) 1435, 1731, 2164
BveI ACCTGC 2 cut(s) 550, 2861
Cac8I GCNNGC 9 cut(s) 189, 547, 778, 998, 2031, 2238, 2358, 2707, 2984
CaiI CAGNNNCTG 2 cut(s) 916, 2989
CfoI GCGC 3 cut(s) 676, 2236, 2242
Cfr10I RCCGGY 2 cut(s) 187, 972
Cfr13I GGNCC 8 cut(s) 296, 591, 1119, 1146, 1250, 1379, 2642, 2997
CseI GACGC 1 cut(s) 2047
Csp6I GTAC 5 cut(s) 349, 970, 1646, 2094, 2525
CspCI CAANNNNNGTGG 2 cut(s) 708, 743
CviQI GTAC 5 cut(s) 349, 970, 1646, 2094, 2525
DraIII CACNNNGTG 1 cut(s) 1430
EaeI YGGCCR 3 cut(s) 1342, 2468, 2757
Eam1104I CTCTTC 4 cut(s) 792, 840, 1789, 2580
EarI CTCTTC 4 cut(s) 792, 840, 1789, 2580
Ecl136II GAGCTC 1 cut(s) 2176
Eco130I CCWWGG 4 cut(s) 781, 991, 1006, 1705
Eco24I GRGCYC 3 cut(s) 2178, 2270, 2915
Eco31I GGTCTC 1 cut(s) 1791
Eco32I GATATC 2 cut(s) 85, 1556
Eco47I GGWCC 5 cut(s) 591, 1250, 1379, 2642, 2997
Eco53kI GAGCTC 1 cut(s) 2176
Eco57I CTGAAG 2 cut(s) 41, 816
Eco81I CCTNAGG 1 cut(s) 1650
Eco88I CYCGRG 1 cut(s) 2142
EcoICRI GAGCTC 1 cut(s) 2176
EcoNI CCTNNNNNAGG 3 cut(s) 124, 586, 2212
EcoO109I RGGNCCY 2 cut(s) 296, 591
EcoRII CCWGG 5 cut(s) 98, 1129, 1527, 2465, 3034
EcoRV GATATC 2 cut(s) 85, 1556
EcoT14I CCWWGG 4 cut(s) 781, 991, 1006, 1705
EcoT22I ATGCAT 2 cut(s) 1573, 1836
EcoT38I GRGCYC 3 cut(s) 2178, 2270, 2915
ErhI CCWWGG 4 cut(s) 781, 991, 1006, 1705
FalI AAGNNNNNCTT 6 cut(s) 1210, 1242, 2192, 2224, 2229, 2261
FauI CCCGC 2 cut(s) 542, 2482
FbaI TGATCA 2 cut(s) 1159, 2779
FblI GTMKAC 1 cut(s) 1104
FokI GGATG 1 cut(s) 103
FriOI GRGCYC 3 cut(s) 2178, 2270, 2915
FspBI CTAG 8 cut(s) 464, 677, 992, 1545, 1563, 1838, 2799, 2922
GlaI GCGC 3 cut(s) 675, 2235, 2241
GsaI CCCAGC 1 cut(s) 2298
GsuI CTGGAG 1 cut(s) 2553
HaeIII GGCC 8 cut(s) 107, 297, 1120, 1148, 1344, 2470, 2759, 2902
HgaI GACGC 1 cut(s) 2047
HhaI GCGC 3 cut(s) 676, 2236, 2242
Hin6I GCGC 3 cut(s) 674, 2234, 2240
HinP1I GCGC 3 cut(s) 674, 2234, 2240
HincII GTYRAC 6 cut(s) 454, 889, 1843, 1867, 2149, 2700
HindII GTYRAC 6 cut(s) 454, 889, 1843, 1867, 2149, 2700
HindIII AAGCTT 2 cut(s) 411, 953
HpaI GTTAAC 2 cut(s) 2149, 2700
HphI GGTGA 5 cut(s) 1891, 2569, 2943, 2989, 3029
Hpy166II GTNNAC 9 cut(s) 454, 889, 1105, 1843, 1867, 2096, 2149, 2560, 2700
Hpy8I GTNNAC 9 cut(s) 454, 889, 1105, 1843, 1867, 2096, 2149, 2560, 2700
Hpy99I CGWCG 1 cut(s) 10
HpyCH4III ACNGT 9 cut(s) 160, 1109, 1625, 1769, 1780, 1991, 2125, 2159, 2625
HpyCH4IV ACGT 2 cut(s) 881, 1974
HpySE526I ACGT 2 cut(s) 881, 1974
HspAI GCGC 3 cut(s) 674, 2234, 2240
KpnI GGTACC 1 cut(s) 973
KroI GCCGGC 1 cut(s) 187
KroNI GCCGGC 1 cut(s) 189
Ksp22I TGATCA 2 cut(s) 1159, 2779
KspAI GTTAAC 2 cut(s) 2149, 2700
LmnI GCTCC 8 cut(s) 10, 61, 272, 527, 2013, 2231, 2910, 2925
Lsp1109I GCAGC 9 cut(s) 149, 341, 793, 1034, 1300, 1992, 2216, 2372, 2779
LweI GCATC 6 cut(s) 125, 775, 1482, 1843, 2722, 2779
MaeI CTAG 8 cut(s) 464, 677, 992, 1545, 1563, 1838, 2799, 2922
MaeII ACGT 2 cut(s) 881, 1974
MaeIII GTNAC 4 cut(s) 302, 612, 1316, 1879
MflI RGATCY 4 cut(s) 637, 1522, 2276, 2428
MhlI GDGCHC 4 cut(s) 1426, 2178, 2270, 2915
MlsI TGGCCA 3 cut(s) 1344, 2470, 2759
MluNI TGGCCA 3 cut(s) 1344, 2470, 2759
MlyI GAGTC 6 cut(s) 79, 299, 2009, 2066, 2752, 2765
MmeI TCCRAC 3 cut(s) 425, 1624, 2726
Mox20I TGGCCA 3 cut(s) 1344, 2470, 2759
Mph1103I ATGCAT 2 cut(s) 1573, 1836
MroNI GCCGGC 1 cut(s) 187
MroXI GAANNNNTTC 3 cut(s) 51, 557, 1226
MscI TGGCCA 3 cut(s) 1344, 2470, 2759
MseI TTAA 9 cut(s) 255, 1182, 1641, 1895, 1914, 2148, 2199, 2247, 2699
MslI CAYNNNNRTG 5 cut(s) 1005, 1167, 1581, 1788, 2571
Msp20I TGGCCA 3 cut(s) 1344, 2470, 2759
MspA1I CMGCKG 1 cut(s) 2005
MspCI CTTAAG 2 cut(s) 1181, 2198
Mva1269I GAATGC 4 cut(s) 53, 1815, 2311, 2856
MvaI CCWGG 5 cut(s) 100, 1131, 1529, 2467, 3036
NaeI GCCGGC 1 cut(s) 189
NciI CCSGG 5 cut(s) 270, 1145, 1823, 2344, 2915
NcoI CCATGG 1 cut(s) 1006
NgoMIV GCCGGC 1 cut(s) 187
NlaIV GGNNCC 4 cut(s) 971, 2137, 2682, 2912
NmeAIII GCCGAG 1 cut(s) 133
NmuCI GTSAC 3 cut(s) 302, 612, 1879
NsiI ATGCAT 2 cut(s) 1573, 1836
NspI RCATGY 2 cut(s) 674, 2824
NspV TTCGAA 1 cut(s) 354
PaqCI CACCTGC 1 cut(s) 550
PctI GAATGC 4 cut(s) 53, 1815, 2311, 2856
PdiI GCCGGC 1 cut(s) 189
PdmI GAANNNNTTC 3 cut(s) 51, 557, 1226
PfeI GAWTC 6 cut(s) 1717, 2283, 2519, 2590, 2932, 2944
PflMI CCANNNNNTGG 3 cut(s) 1012, 2690, 2972
PfoI TCCNGGA 1 cut(s) 98
PleI GAGTC 6 cut(s) 78, 299, 2009, 2066, 2751, 2765
PpsI GAGTC 6 cut(s) 78, 299, 2009, 2066, 2751, 2765
PpuMI RGGWCCY 1 cut(s) 591
PshBI ATTAAT 1 cut(s) 1641
Psp124BI GAGCTC 1 cut(s) 2178
Psp1406I AACGTT 1 cut(s) 881
Psp5II RGGWCCY 1 cut(s) 591
Psp6I CCWGG 5 cut(s) 98, 1129, 1527, 2465, 3034
PspFI CCCAGC 1 cut(s) 2294
PspGI CCWGG 5 cut(s) 98, 1129, 1527, 2465, 3034
PspN4I GGNNCC 4 cut(s) 971, 2137, 2682, 2912
PspPI GGNCC 8 cut(s) 296, 591, 1119, 1146, 1250, 1379, 2642, 2997
PspPPI RGGWCCY 1 cut(s) 591
PstI CTGCAG 1 cut(s) 1024
PstNI CAGNNNCTG 2 cut(s) 916, 2989
PsuI RGATCY 4 cut(s) 637, 1522, 2276, 2428
PvuII CAGCTG 1 cut(s) 2005
RsaI GTAC 5 cut(s) 350, 971, 1647, 2095, 2526
RsaNI GTAC 5 cut(s) 349, 970, 1646, 2094, 2525
RseI CAYNNNNRTG 5 cut(s) 1005, 1167, 1581, 1788, 2571
SacI GAGCTC 1 cut(s) 2178
SaqAI TTAA 9 cut(s) 255, 1182, 1641, 1895, 1914, 2148, 2199, 2247, 2699
Sau96I GGNCC 8 cut(s) 296, 591, 1119, 1146, 1250, 1379, 2642, 2997
ScaI AGTACT 2 cut(s) 350, 2526
SchI GAGTC 6 cut(s) 79, 299, 2009, 2066, 2752, 2765
SduI GDGCHC 4 cut(s) 1426, 2178, 2270, 2915
SfaNI GCATC 6 cut(s) 125, 775, 1482, 1843, 2722, 2779
SfcI CTRYAG 2 cut(s) 1020, 2121
SfuI TTCGAA 1 cut(s) 354
SinI GGWCC 5 cut(s) 591, 1250, 1379, 2642, 2997
SmiMI CAYNNNNRTG 5 cut(s) 1005, 1167, 1581, 1788, 2571
SmlI CTYRAG 4 cut(s) 121, 1181, 2099, 2198
SmoI CTYRAG 4 cut(s) 121, 1181, 2099, 2198
SpeI ACTAGT 1 cut(s) 2798
SsiI CCGC 8 cut(s) 226, 549, 565, 1117, 1532, 2139, 2475, 3000
SspI AATATT 1 cut(s) 2252
SspMI CTAG 8 cut(s) 464, 677, 992, 1545, 1563, 1838, 2799, 2922
SstI GAGCTC 1 cut(s) 2178
StyI CCWWGG 4 cut(s) 781, 991, 1006, 1705
TaaI ACNGT 9 cut(s) 160, 1109, 1625, 1769, 1780, 1991, 2125, 2159, 2625
TaiI ACGT 2 cut(s) 884, 1977
TaqI TCGA 6 cut(s) 87, 354, 587, 1111, 1311, 1676
TaqII GACCGA 3 cut(s) 906, 1290, 1396
TatI WGTACW 3 cut(s) 348, 2093, 2524
TauI GCSGC 2 cut(s) 1120, 2141
TfiI GAWTC 6 cut(s) 1717, 2283, 2519, 2590, 2932, 2944
Tru1I TTAA 9 cut(s) 255, 1182, 1641, 1895, 1914, 2148, 2199, 2247, 2699
Tru9I TTAA 9 cut(s) 255, 1182, 1641, 1895, 1914, 2148, 2199, 2247, 2699
TscAI CASTG 3 cut(s) 1435, 1731, 2164
TseFI GTSAC 3 cut(s) 302, 612, 1879
TseI GCWGC 9 cut(s) 137, 329, 806, 1022, 1288, 2005, 2204, 2360, 2792
Tsp45I GTSAC 3 cut(s) 302, 612, 1879
TspGWI ACGGA 5 cut(s) 23, 298, 362, 1650, 2974
TspRI CASTG 3 cut(s) 1435, 1731, 2164
Van91I CCANNNNNTGG 3 cut(s) 1012, 2690, 2972
Vha464I CTTAAG 2 cut(s) 1181, 2198
VpaK11BI GGWCC 5 cut(s) 591, 1250, 1379, 2642, 2997
VspI ATTAAT 1 cut(s) 1641
XagI CCTNNNNNAGG 3 cut(s) 124, 586, 2212
XapI RAATTY 6 cut(s) 571, 733, 1479, 1500, 1614, 2393
XbaI TCTAGA 1 cut(s) 1562
XceI RCATGY 2 cut(s) 674, 2824
XcmI CCANNNNNNNNNTGG 2 cut(s) 37, 2823
XmaJI CCTAGG 1 cut(s) 991
XmiI GTMKAC 1 cut(s) 1104
XmnI GAANNNNTTC 3 cut(s) 51, 557, 1226
XspI CTAG 8 cut(s) 464, 677, 992, 1545, 1563, 1838, 2799, 2922
ZrmI AGTACT 2 cut(s) 350, 2526
Zsp2I ATGCAT 2 cut(s) 1573, 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.