RchiOBHm_Chr3g0456621
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
6092914 .. 6094771
1858 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42344

Sequence Viewer

Length: 1293 bp
ATGAATCTTGGGCATAAGAATCGTGCAGTGAGTTCTACAGCCATGAATGACCGGAGTAGTCGTTCCCATAGTTGCTTGACAGTTCATGTTCACGGAAGGGATCTGGCATCTGGAAGTATTCTTCGTGGTTGTATGCATCTAGTTGACTTAGCAGGAAGCGAAAGAGTTGATAAATCCGAGGTGACTGGTGATAGATTAAAGGAGGCACAACATATTAACAAATCTCTCTCAGCTTTAGGAGATGTCATTGCCTCTCTTGCTCAAAAGAATTCACACGTTCCGTATAGAAATAGTAAACTCACACAACTACTCCAAGACTCACTTGGAGGGCAAGCAAAGACACTCATGTTTGTTCACATTAGTCCTGAGTATGAAGCTCTTGGAGAAACATTGAGTACCCTCAAATTTGCAGAACGGGTTTCCACAGTTGAACTTGGTGCTGCTCGAGTCAACAAAGATGGTGCAAATGTTAAAGAGCTGAAAGAACAGATTGCTACTCTGAAGGCAGCCCTAGCACGAAAAGAAGGTGAGGGAATGCAGTTGAAAAATTCGCTCTCCCTAAGCCCTGAAAGATTTAGAATGAATTCTGCTGGCTCTTCGCCTATGCATCCAAGAGGGAAAAGTACTGGAGATTTTTCCGGTGGTCGTAAGCAACCAACGGAGGATTTTGGAAATATAGAGGCTCGTAAAACCTCTACATCAAAGCCAAAAAGGCGAAGTTTGGATCTTCAAGACATGTTGATGCATTCACCTTCATGGCCACCGGTTGGTAGTCCCAAAGTGAATGGAAAGGAGGATGATAAGGAGTTATTTTCATCAATTCCTGGTGATTGGGTTGATAAGGTGATGGTGAACAAGCTTGAGAGTAAAAGTAGAGAACAAAGTCCATTAAGATCATGTTGGGATCATGTGGACAACAGACAGCTACCAGAGATGTTTGGTCAGAGTCGCCTCTCACACCCTTCCATCATATGTTCGACGACAAATAAGGAGGAGAGTCAAGACTTTGACGAATCTGATGATCAACTTGATGCTGCAACTAGTGATTCTTCAGAGCCAGACACGCTTTGGCAACTAAATGCTCCTATTAAAGCTACAAACATTCCAAATGGGTTGGGAGCAAAACCAAAGAAAACCAACTGCAGGCCGGTAAGGAGCCCAGAAACTAGAAGTTTCATTCCATCACTAATTCCTTCACCGTCGCGAAAACCACCCAATGGTGTTAGTCAAGCTTTGCCTAAGAGGCATTCAGTTTCTGCTGAAGGCAAGCGAAGGTATGGGAGTGCAAAGTGA

Protein Analysis

430

Amino Acids

47.09

Weight (kDa)

9.4

Isoelectric Point (pI)

60.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 1 - 142 1.7e-56 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 767, 1217
AccII CGCG 1 cut(s) 1204
AclWI GGATC 3 cut(s) 108, 732, 912
AcoI YGGCCR 1 cut(s) 758
AcsI RAATTY 4 cut(s) 268, 404, 547, 583
AcuI CTGAAG 3 cut(s) 521, 1035, 1281
AfaI GTAC 2 cut(s) 397, 625
AfiI CCNNNNNNNGG 3 cut(s) 767, 1143, 1217
AflIII ACRYGT 2 cut(s) 274, 735
AgeI ACCGGT 1 cut(s) 763
AgsI TTSAA 3 cut(s) 431, 544, 731
AhlI ACTAGT 1 cut(s) 1040
AjnI CCWGG 1 cut(s) 823
AloI GAACNNNNNNTCC 2 cut(s) 46, 78
AluBI AGCT 7 cut(s) 233, 377, 478, 859, 925, 1094, 1232
AluI AGCT 7 cut(s) 233, 377, 478, 859, 925, 1094, 1232
AlwI GGATC 3 cut(s) 108, 732, 912
AlwNI CAGNNNCTG 1 cut(s) 1256
Ama87I CYCGRG 1 cut(s) 444
AoxI GGCC 2 cut(s) 758, 1145
ApeKI GCWGC 3 cut(s) 440, 506, 1034
ApoI RAATTY 4 cut(s) 268, 404, 547, 583
AsiGI ACCGGT 1 cut(s) 763
Asp700I GAANNNNTTC 1 cut(s) 583
AsuHPI GGTGA 8 cut(s) 193, 200, 539, 741, 839, 856, 862, 1188
AvaI CYCGRG 1 cut(s) 444
BalI TGGCCA 1 cut(s) 760
BanII GRGCYC 1 cut(s) 1160
BbvI GCAGC 3 cut(s) 427, 518, 1021
BccI CCATC 4 cut(s) 452, 841, 974, 1189
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 1 cut(s) 825
BclI TGATCA 1 cut(s) 1021
BcuI ACTAGT 1 cut(s) 1040
BfaI CTAG 4 cut(s) 140, 512, 1041, 1167
BfmI CTRYAG 2 cut(s) 36, 1141
BglI GCCNNNNNGGC 2 cut(s) 712, 1243
BisI GCNGC 3 cut(s) 441, 507, 1035
BlsI GCNGC 3 cut(s) 442, 508, 1036
BmcAI AGTACT 1 cut(s) 625
Bme1390I CCNGG 1 cut(s) 825
BmeT110I CYCGRG 1 cut(s) 444
BmiI GGNNCC 1 cut(s) 1157
BmrFI CCNGG 1 cut(s) 825
BmsI GCATC 5 cut(s) 116, 145, 616, 732, 1021
BpmI CTGGAG 1 cut(s) 648
Bpu10I CCTNAGC 1 cut(s) 560
BpuEI CTTGAG 1 cut(s) 881
BsaJI CCNNGG 1 cut(s) 177
BsaWI WCCGGW 3 cut(s) 51, 638, 763
BsaXI ACNNNNNCTCC 4 cut(s) 46, 76, 294, 324
Bsc4I CCNNNNNNNGG 3 cut(s) 767, 1143, 1217
Bse118I RCCGGY 2 cut(s) 763, 1147
Bse1I ACTGG 2 cut(s) 190, 631
Bse3DI GCAATG 1 cut(s) 246
BseBI CCWGG 1 cut(s) 825
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 2 cut(s) 607, 802
BseLI CCNNNNNNNGG 3 cut(s) 767, 1143, 1217
BseMI GCAATG 1 cut(s) 246
BseMII CTCAG 2 cut(s) 243, 357
BseNI ACTGG 2 cut(s) 190, 631
BseRI GAGGAG 1 cut(s) 1007
BseXI GCAGC 3 cut(s) 427, 518, 1021
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 1204
BshFI GGCC 2 cut(s) 760, 1147
BshTI ACCGGT 1 cut(s) 763
BsiHKCI CYCGRG 1 cut(s) 444
BsiSI CCGG 4 cut(s) 52, 639, 764, 1148
BslFI GGGAC 1 cut(s) 759
BslI CCNNNNNNNGG 3 cut(s) 767, 1143, 1217
BsmFI GGGAC 1 cut(s) 759
BsmI GAATGC 3 cut(s) 540, 745, 1246
BsnI GGCC 2 cut(s) 760, 1147
BsoBI CYCGRG 1 cut(s) 444
Bsp1286I GDGCHC 1 cut(s) 1160
Bsp143I GATC 5 cut(s) 100, 724, 893, 904, 1021
Bsp68I TCGCGA 1 cut(s) 1204
BspANI GGCC 2 cut(s) 760, 1147
BspCNI CTCAG 2 cut(s) 242, 358
BspFNI CGCG 1 cut(s) 1204
BspLI GGNNCC 1 cut(s) 1157
BspMAI CTGCAG 1 cut(s) 1145
BspPI GGATC 3 cut(s) 108, 732, 912
BspQI GCTCTTC 1 cut(s) 601
BsrDI GCAATG 1 cut(s) 246
BsrFI RCCGGY 2 cut(s) 763, 1147
BsrI ACTGG 2 cut(s) 190, 631
BssAI RCCGGY 2 cut(s) 763, 1147
BssECI CCNNGG 1 cut(s) 177
BssMI GATC 5 cut(s) 100, 724, 893, 904, 1021
Bst2UI CCWGG 1 cut(s) 825
Bst4CI ACNGT 3 cut(s) 82, 427, 1200
Bst6I CTCTTC 1 cut(s) 601
BstC8I GCNNGC 4 cut(s) 333, 592, 1145, 1268
BstDEI CTNAG 5 cut(s) 148, 229, 366, 560, 1239
BstF5I GGATG 2 cut(s) 607, 802
BstFNI CGCG 1 cut(s) 1204
BstKTI GATC 5 cut(s) 103, 727, 896, 907, 1024
BstMBI GATC 5 cut(s) 100, 724, 893, 904, 1021
BstMWI GCNNNNNNNGC 5 cut(s) 257, 512, 712, 1063, 1243
BstNI CCWGG 1 cut(s) 825
BstNSI RCATGY 1 cut(s) 739
BstSCI CCNGG 1 cut(s) 823
BstSFI CTRYAG 2 cut(s) 36, 1141
BstUI CGCG 1 cut(s) 1204
BstV1I GCAGC 3 cut(s) 427, 518, 1021
BstX2I RGATCY 2 cut(s) 100, 724
BstYI RGATCY 2 cut(s) 100, 724
BsuRI GGCC 2 cut(s) 760, 1147
BtsCI GGATG 2 cut(s) 607, 802
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 1 cut(s) 33
BtuMI TCGCGA 1 cut(s) 1204
Cac8I GCNNGC 4 cut(s) 333, 592, 1145, 1268
CaiI CAGNNNCTG 1 cut(s) 1256
Cfr10I RCCGGY 2 cut(s) 763, 1147
Csp6I GTAC 2 cut(s) 396, 624
CspAI ACCGGT 1 cut(s) 763
CviAII CATG 7 cut(s) 43, 86, 346, 736, 756, 897, 908
CviQI GTAC 2 cut(s) 396, 624
DdeI CTNAG 5 cut(s) 148, 229, 366, 560, 1239
DpnI GATC 5 cut(s) 102, 726, 895, 906, 1023
DpnII GATC 5 cut(s) 100, 724, 893, 904, 1021
EaeI YGGCCR 1 cut(s) 758
Eam1104I CTCTTC 1 cut(s) 601
EarI CTCTTC 1 cut(s) 601
Eco24I GRGCYC 1 cut(s) 1160
Eco57I CTGAAG 3 cut(s) 521, 1035, 1281
Eco88I CYCGRG 1 cut(s) 444
EcoRI GAATTC 2 cut(s) 268, 583
EcoRII CCWGG 1 cut(s) 823
EcoT22I ATGCAT 3 cut(s) 138, 609, 747
EcoT38I GRGCYC 1 cut(s) 1160
FaeI CATG 7 cut(s) 46, 89, 349, 739, 759, 900, 911
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FaqI GGGAC 1 cut(s) 759
FatI CATG 7 cut(s) 42, 85, 345, 735, 755, 896, 907
FauNDI CATATG 1 cut(s) 971
FbaI TGATCA 1 cut(s) 1021
Fnu4HI GCNGC 3 cut(s) 441, 507, 1035
FokI GGATG 2 cut(s) 594, 809
FriOI GRGCYC 1 cut(s) 1160
Fsp4HI GCNGC 3 cut(s) 441, 507, 1035
FspBI CTAG 4 cut(s) 140, 512, 1041, 1167
GluI GCNGC 3 cut(s) 441, 507, 1035
GsuI CTGGAG 1 cut(s) 648
HaeIII GGCC 2 cut(s) 760, 1147
HapII CCGG 4 cut(s) 52, 639, 764, 1148
Hin1II CATG 7 cut(s) 46, 89, 349, 739, 759, 900, 911
HincII GTYRAC 2 cut(s) 145, 451
HindII GTYRAC 2 cut(s) 145, 451
HindIII AAGCTT 2 cut(s) 857, 1230
HinfI GANTC 8 cut(s) 4, 19, 317, 447, 946, 997, 1013, 1046
HpaII CCGG 4 cut(s) 52, 639, 764, 1148
HphI GGTGA 8 cut(s) 193, 200, 539, 741, 839, 856, 862, 1188
Hpy166II GTNNAC 7 cut(s) 91, 145, 296, 355, 451, 853, 913
Hpy188I TCNGA 5 cut(s) 178, 501, 945, 1018, 1054
Hpy188III TCNNGA 5 cut(s) 111, 365, 731, 1001, 1203
Hpy8I GTNNAC 7 cut(s) 91, 145, 296, 355, 451, 853, 913
Hpy99I CGWCG 2 cut(s) 982, 1204
HpyAV CCTTC 8 cut(s) 90, 496, 518, 762, 972, 1203, 1256, 1266
HpyCH4III ACNGT 3 cut(s) 82, 427, 1200
HpyCH4IV ACGT 1 cut(s) 276
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 512, 712, 1063, 1243
HpyF3I CTNAG 5 cut(s) 148, 229, 366, 560, 1239
HpySE526I ACGT 1 cut(s) 276
Hsp92II CATG 7 cut(s) 46, 89, 349, 739, 759, 900, 911
Ksp22I TGATCA 1 cut(s) 1021
Kzo9I GATC 5 cut(s) 100, 724, 893, 904, 1021
LguI GCTCTTC 1 cut(s) 601
LmnI GCTCC 3 cut(s) 1087, 1118, 1155
Lsp1109I GCAGC 3 cut(s) 427, 518, 1021
LweI GCATC 5 cut(s) 116, 145, 616, 732, 1021
MaeI CTAG 4 cut(s) 140, 512, 1041, 1167
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 1 cut(s) 181
MalI GATC 5 cut(s) 102, 726, 895, 906, 1023
MboI GATC 5 cut(s) 100, 724, 893, 904, 1021
MboII GAAGA 4 cut(s) 113, 588, 719, 1041
MflI RGATCY 2 cut(s) 100, 724
MhlI GDGCHC 1 cut(s) 1160
MlsI TGGCCA 1 cut(s) 760
MluCI AATT 6 cut(s) 268, 404, 547, 583, 819, 1188
MluNI TGGCCA 1 cut(s) 760
MlyI GAGTC 4 cut(s) 311, 456, 955, 1006
Mox20I TGGCCA 1 cut(s) 760
Mph1103I ATGCAT 3 cut(s) 138, 609, 747
MroXI GAANNNNTTC 1 cut(s) 583
MscI TGGCCA 1 cut(s) 760
MseI TTAA 5 cut(s) 197, 216, 471, 890, 1089
MslI CAYNNNNRTG 2 cut(s) 740, 754
Msp20I TGGCCA 1 cut(s) 760
MspI CCGG 4 cut(s) 52, 639, 764, 1148
MspR9I CCNGG 1 cut(s) 825
Mva1269I GAATGC 3 cut(s) 540, 745, 1246
MvaI CCWGG 1 cut(s) 825
MvnI CGCG 1 cut(s) 1204
MwoI GCNNNNNNNGC 5 cut(s) 257, 512, 712, 1063, 1243
NdeI CATATG 1 cut(s) 971
NdeII GATC 5 cut(s) 100, 724, 893, 904, 1021
NlaIII CATG 7 cut(s) 46, 89, 349, 739, 759, 900, 911
NlaIV GGNNCC 1 cut(s) 1157
NmuCI GTSAC 1 cut(s) 181
NruI TCGCGA 1 cut(s) 1204
NsiI ATGCAT 3 cut(s) 138, 609, 747
NspI RCATGY 1 cut(s) 739
PaeR7I CTCGAG 1 cut(s) 444
PciI ACATGT 1 cut(s) 735
PciSI GCTCTTC 1 cut(s) 601
PctI GAATGC 3 cut(s) 540, 745, 1246
PdmI GAANNNNTTC 1 cut(s) 583
PfeI GAWTC 4 cut(s) 4, 19, 1013, 1046
PflMI CCANNNNNTGG 2 cut(s) 767, 1217
PinAI ACCGGT 1 cut(s) 763
PkrI GCNGC 3 cut(s) 442, 508, 1036
PleI GAGTC 4 cut(s) 311, 455, 954, 1005
PpsI GAGTC 4 cut(s) 311, 455, 954, 1005
PscI ACATGT 1 cut(s) 735
Psp6I CCWGG 1 cut(s) 823
PspGI CCWGG 1 cut(s) 823
PspN4I GGNNCC 1 cut(s) 1157
PspXI VCTCGAGB 1 cut(s) 444
PstI CTGCAG 1 cut(s) 1145
PstNI CAGNNNCTG 1 cut(s) 1256
PsuI RGATCY 2 cut(s) 100, 724
RruI TCGCGA 1 cut(s) 1204
RsaI GTAC 2 cut(s) 397, 625
RsaNI GTAC 2 cut(s) 396, 624
RseI CAYNNNNRTG 2 cut(s) 740, 754
SapI GCTCTTC 1 cut(s) 601
SaqAI TTAA 5 cut(s) 197, 216, 471, 890, 1089
SatI GCNGC 3 cut(s) 441, 507, 1035
Sau3AI GATC 5 cut(s) 100, 724, 893, 904, 1021
ScaI AGTACT 1 cut(s) 625
SchI GAGTC 4 cut(s) 311, 456, 955, 1006
ScrFI CCNGG 1 cut(s) 825
SduI GDGCHC 1 cut(s) 1160
SfaNI GCATC 5 cut(s) 116, 145, 616, 732, 1021
SfcI CTRYAG 2 cut(s) 36, 1141
Sfr274I CTCGAG 1 cut(s) 444
SlaI CTCGAG 1 cut(s) 444
SmiMI CAYNNNNRTG 2 cut(s) 740, 754
SmlI CTYRAG 2 cut(s) 444, 860
SmoI CTYRAG 2 cut(s) 444, 860
SpeI ACTAGT 1 cut(s) 1040
Sse9I AATT 6 cut(s) 268, 404, 547, 583, 819, 1188
SspMI CTAG 4 cut(s) 140, 512, 1041, 1167
StyD4I CCNGG 1 cut(s) 823
TaaI ACNGT 3 cut(s) 82, 427, 1200
TaiI ACGT 1 cut(s) 279
TaqI TCGA 2 cut(s) 445, 977
TasI AATT 6 cut(s) 268, 404, 547, 583, 819, 1188
TatI WGTACW 1 cut(s) 623
TfiI GAWTC 4 cut(s) 4, 19, 1013, 1046
Tru1I TTAA 5 cut(s) 197, 216, 471, 890, 1089
Tru9I TTAA 5 cut(s) 197, 216, 471, 890, 1089
TscAI CASTG 1 cut(s) 33
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 3 cut(s) 440, 506, 1034
Tsp45I GTSAC 1 cut(s) 181
TspDTI ATGAA 8 cut(s) 17, 59, 74, 387, 596, 744, 804, 1165
TspGWI ACGGA 3 cut(s) 108, 270, 674
TspRI CASTG 1 cut(s) 33
Van91I CCANNNNNTGG 2 cut(s) 767, 1217
XapI RAATTY 4 cut(s) 268, 404, 547, 583
XceI RCATGY 1 cut(s) 739
XcmI CCANNNNNNNNNTGG 2 cut(s) 320, 1065
XhoI CTCGAG 1 cut(s) 444
XmnI GAANNNNTTC 1 cut(s) 583
XspI CTAG 4 cut(s) 140, 512, 1041, 1167
ZrmI AGTACT 1 cut(s) 625
Zsp2I ATGCAT 3 cut(s) 138, 609, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.