Rroxscaffold_6G00422580
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
43413333 .. 43419385
6053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00422580.1

Sequence Viewer

Length: 3039 bp
ATGGCAACGGAGCAATCATTGCCTTTTAATGTTGCTTCTGTGGTTGAAGCCGTTCTTCAACAGCATGGGACTCGTCTCAGCGATGTGGGATTGGCTTCAAGGAAGGCAGAGGAAGCTTCTGTGAGAAGGTATGAAGCAGCCGGATGGCTTAGAAAGACGGTTGGAGTGGTGGGCGGTAAAGATTTGCCAGCGGAGCCCTCTGAAGAAGATTTTAGGCTTGGATTGCGAAGTGGAATAATCCTTTGCAATGTTATTAACAAGGTTCAACCCGGAGCTGTGGCAAAGGTTGTTGAAGGCCCTTGTGACTCTGTGCCTATTCCTGACGGGGCAGCTCTATCAGCATTTCAATACTTTGAAAACGTCAGAAATTTCCTTGTGGCTGTGGAGGAATTGGGGCTTCCAACCTTTGAAGCCTCTGATTTGGAACAGGGAGGAAAATCTGCAAGTGCAAGGATTGTCAACTGTGTTCTAGCACTAAAATCATATAGTGACTGGAAACAAGCAGGCGGAAGTGGATCATGGAAATTTGTTGGAAACTTGAAACCACCTATATCTGGGAAACCCTTTCTGCGAAAAAATTCTGAACCATTCATGAGTTCTTTTACAAGGACCTTATCATGGAGTGAAAGATCGCAAGATAGTTTCTCCAGTGAAGATCCCAATGAAGCAAGTTCTTCTCATTCCTTACACATGCTAGTACGTGAAGTTCTTTTGGACAAAAAACAGGAAGAAATTCCATTTATTGTGGAATCTATGCTGAGTAAAGTAATGGAGGAGTTTCAGCATCGGCTAGCAAGCCAAACTGAACTGGTAAAAGCACCTTCCAAAGATAGCCCTGGCCCTGACTCTGAGTCTCCATCTCTTTCTGAACCTGGTTCTGGTGATATCAAGAATGAAGAGAAAGCTGCGAATCAAATAAAGAAGGATGATTGTTGCAATCAAACATATGACCATCAAGAGGGATCAAAAGGCCAGTTTGTGAAACATAAAATGTTGGTTGAACAACAAAAGAAAAATATTCAGGAATTGAAACATAATCTATATGATACAAAAGCAGGAATGAAGTTTCTACAAATGAAGTACCAGGAGGATTTCAACAGCCTAGGTATGCACCTGCATGGTTTGGCTCATGCAGCATCAGGATACCAGAAAGTTCTTGAAGAAAATCGCAAGTTATACAATCTGGTGCAGGATCTGAAAGGAAATATAAGGGTGTACTGCCGAGTGCGTCCTCTGTTGCCTGGGCAAACAAATCGTTCCAATACTTTTGATCAAATAGATGATGGAAAAATTACAATTGTCACCCCTTCAAAATATGGCAAAGAGGGGCGGAAATCTTTCAGTTTCAACAAAGTATTTGGGCCATTATCAACCCAAGAGGAGGTATTTTCAGATACGCAGCCTCTCATTCGGTCAGTTCTTGATGGTTACAATGTCTGTATATTTGCTTATGGACAAACCGGATCAGGAAAAACTTATACTATGACTGGACCGACTGAGGTTACAGAAGAAAGCCGAGGTGTAAATTACAGAGCATTGGGTGATCTATTTCAATTATCAGAACTGAGAAAGGACACCATTCGCTATGAAATTTCCGTTCAGATGCTTGAAATTTATAATGAGCAAGTTAGGGATCTCCTTGCTCTTACATTAGAAATTCGAAATAGTTCTCAAAACGGCATTAACGTACCTGAAGCGAACCTTGTACCTGTATCATCAACATCTGATGTTATATATTTGATGAACCTTGGGCATAAGAATCGTGCAGTGAGTTCTACAGCCATGAATGACCGGAGTAGTCGTTCCCATAGTTGCTTGACAGTTCATGTTCACGGAAGGGATCTGGCATCTGGAAGTATTCTTCGTGGTTGTATGCATCTAGTTGACTTAGCAGGAAGTGAAAGAGTTGATAAATCCGAGGTGACTGGTGATAGATTAAAGGAGGCACAACATATTAACAAATCTCTCTCAGCTTTAGGAGATGTCATTGCCTCTCTTGCTCAAAAAAATTCACACGTTCCGTATAGAAATAGTAAACTCACACAACTACTCCAAGACTCACTTGGAGGGCAAGCAAAGACACTCATGTTTGTTCACATTAGTCCTGAGTATGAAGCTCTTGGAGAAACATTGAGTACCCTCAAATTTGCAGAACGGGTTTCCACAGTTGAACTTGGTGCTGCTCGAGTCAACAAAGATGGTGCAAATGTTAAAGAGCTGAAAGAACAGATTGCTACTTTGAAGGCAGCCTTAGCACGAAAAGAAGGTGAGGGAATGCAGTTGAAAAATTCGCTCTCCCTAAGCCCTGAAAGATTTAGAATGAATTCTGCTGGCTCTTCGCCTATGCATCCAAGAGGGAAAAGTACTAGTACTGGAGATTTTTCCGGTGGTCGTAAGCAACCAACGGAGGATTTTGGAAATATAGAGGCGCGTAAAACCTCTACATCAAAGCCAAAAAGGCGAAGTTTGGATCTTCAAGACATGTTGATGCATTCACCTTCATGGCCACCGGTTGGTAGTCCCAAAGTGAATGGAAAGGAGGATGATAAGGAGTTATTTTCATCAATTCCCGGTGATTGGGTTGATAAGGTGATGGTGAACAAGCTTGAGAGTAAAAGTAGAGAACAAAGTCCATTAAGATCATGTTGGGATCATGTGGACAACAGACAGCTACCAGAGATGTTTGGTCAGAGTCGCCTCTCACTCCCTTCCATCATATGTTCAACGACAAATAAGGAGGAGAGTCAAGACTTTGACGAATCTGATGATCAACTTGATGCTGCAACTAGTGATTCTTCAGAGCCAGACACGCTTTGGCAACTAAATGCTCCTATTAAAGCTACAAACATTCCAAATGGGTTGGGAGCAAAACCAAAGAAAACTAACTGCAGGCCGGTAAGGAGCCCAGAAACTAGAAGTTTCATTCCATCACTAATTCCTTCACCGTCGCGAAAACCACCCAATGGTGTTAGTCAAGCTTTGCCTAAGAGGCATTCAGTTTCTGCTGAAGGCAAACGAAGGTATGGGAGTGCAAAGTGA

Protein Analysis

1012

Amino Acids

111.6

Weight (kDa)

8.21

Isoelectric Point (pI)

52.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CH PF00307 43 - 162 8.9e-12 Calponin homology (CH) domain
Microtub_bd PF16796 387 - 547 1.1e-43 Microtubule binding
Kinesin PF00225 408 - 722 4.2e-109 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1617
AarI CACCTGC 1 cut(s) 1122
Acc36I ACCTGC 1 cut(s) 1122
AccB7I CCANNNNNTGG 2 cut(s) 2513, 2963
AccII CGCG 2 cut(s) 2431, 2950
AciI CCGC 4 cut(s) 174, 191, 507, 1330
AclWI GGATC 9 cut(s) 523, 650, 970, 1200, 1471, 1641, 1848, 2478, 2658
AcoI YGGCCR 1 cut(s) 2504
AcuI CTGAAG 4 cut(s) 222, 1713, 2781, 3027
AfaI GTAC 8 cut(s) 699, 1082, 1217, 1689, 1707, 2137, 2365, 2371
AfiI CCNNNNNNNGG 8 cut(s) 554, 618, 878, 958, 1381, 2513, 2577, 2963
AflIII ACRYGT 2 cut(s) 2014, 2481
AgeI ACCGGT 1 cut(s) 2509
AhdI GACNNNNNGTC 1 cut(s) 850
AhlI ACTAGT 2 cut(s) 2366, 2786
AjnI CCWGG 4 cut(s) 835, 871, 1083, 1240
AloI GAACNNNNNNTCC 2 cut(s) 1786, 1818
Alw26I GTCTC 2 cut(s) 80, 858
AlwI GGATC 9 cut(s) 523, 650, 970, 1200, 1471, 1641, 1848, 2478, 2658
AlwNI CAGNNNCTG 2 cut(s) 1195, 3002
Ama87I CYCGRG 1 cut(s) 2184
AoxI GGCC 6 cut(s) 295, 838, 970, 1361, 2504, 2891
ApeKI GCWGC 8 cut(s) 137, 329, 905, 1133, 1399, 2180, 2246, 2780
AsiGI ACCGGT 1 cut(s) 2509
Asp700I GAANNNNTTC 6 cut(s) 51, 577, 732, 1337, 1666, 2323
AspA2I CCTAGG 1 cut(s) 1102
AspLEI GCGC 1 cut(s) 2431
AspS9I GGNCC 5 cut(s) 296, 609, 839, 1361, 1490
AsuC2I CCSGG 2 cut(s) 270, 2571
AsuII TTCGAA 1 cut(s) 1660
AsuNHI GCTAGC 1 cut(s) 790
AvaI CYCGRG 1 cut(s) 2184
AvaII GGWCC 2 cut(s) 609, 1490
AvrII CCTAGG 1 cut(s) 1102
BalI TGGCCA 1 cut(s) 2506
BanII GRGCYC 2 cut(s) 198, 2906
BbvI GCAGC 8 cut(s) 149, 341, 892, 1145, 1411, 2167, 2258, 2767
BccI CCATC 9 cut(s) 138, 865, 960, 1277, 1418, 2192, 2587, 2720, 2935
BceAI ACGGC 2 cut(s) 35, 1693
BcgI CGANNNNNNTGC 6 cut(s) 53, 87, 1235, 1269, 1742, 1776
BciT130I CCWGG 4 cut(s) 837, 873, 1085, 1242
BciVI GTATCC 1 cut(s) 1136
BclI TGATCA 2 cut(s) 1270, 2767
BcnI CCSGG 2 cut(s) 270, 2571
BcoDI GTCTC 2 cut(s) 80, 858
BcuI ACTAGT 2 cut(s) 2366, 2786
BfaI CTAG 8 cut(s) 470, 695, 791, 1103, 1880, 2367, 2787, 2913
BfmI CTRYAG 2 cut(s) 1776, 2887
BfuAI ACCTGC 1 cut(s) 1122
BfuI GTATCC 1 cut(s) 1136
BglI GCCNNNNNGGC 2 cut(s) 2458, 2989
BisI GCNGC 8 cut(s) 138, 330, 906, 1134, 1400, 2181, 2247, 2781
BlnI CCTAGG 1 cut(s) 1102
BlsI GCNGC 8 cut(s) 139, 331, 907, 1135, 1401, 2182, 2248, 2782
BmcAI AGTACT 2 cut(s) 2365, 2371
Bme1390I CCNGG 6 cut(s) 270, 837, 873, 1085, 1242, 2571
Bme18I GGWCC 2 cut(s) 609, 1490
BmeRI GACNNNNNGTC 1 cut(s) 850
BmeT110I CYCGRG 1 cut(s) 2184
BmgT120I GGNCC 5 cut(s) 296, 609, 839, 1361, 1490
BmiI GGNNCC 2 cut(s) 195, 2903
BmrFI CCNGG 6 cut(s) 270, 837, 873, 1085, 1242, 2571
BmsI GCATC 8 cut(s) 793, 1145, 1593, 1856, 1885, 2356, 2478, 2767
BmtI GCTAGC 1 cut(s) 794
BpmI CTGGAG 2 cut(s) 631, 2394
Bpu10I CCTNAGC 2 cut(s) 2251, 2300
Bpu14I TTCGAA 1 cut(s) 1660
BpuEI CTTGAG 1 cut(s) 2627
BpuMI CCSGG 2 cut(s) 270, 2571
BsaAI YACGTR 1 cut(s) 701
BsaJI CCNNGG 6 cut(s) 835, 1102, 1241, 1516, 1747, 1917
BsaWI WCCGGW 4 cut(s) 1460, 1791, 2384, 2509
BsaXI ACNNNNNCTCC 4 cut(s) 1786, 1816, 2034, 2064
Bsc4I CCNNNNNNNGG 8 cut(s) 554, 618, 878, 958, 1381, 2513, 2577, 2963
Bse118I RCCGGY 2 cut(s) 2509, 2893
Bse1I ACTGG 7 cut(s) 497, 648, 813, 973, 1492, 1930, 2377
Bse3DI GCAATG 3 cut(s) 17, 253, 1986
BseBI CCWGG 4 cut(s) 837, 873, 1085, 1242
BseDI CCNNGG 6 cut(s) 835, 1102, 1241, 1516, 1747, 1917
BseGI GGATG 4 cut(s) 149, 931, 2347, 2548
BseLI CCNNNNNNNGG 8 cut(s) 554, 618, 878, 958, 1381, 2513, 2577, 2963
BseMI GCAATG 3 cut(s) 17, 253, 1986
BseMII CTCAG 7 cut(s) 91, 749, 840, 1488, 1556, 1983, 2097
BseNI ACTGG 7 cut(s) 497, 648, 813, 973, 1492, 1930, 2377
BseRI GAGGAG 3 cut(s) 788, 1394, 2753
BseXI GCAGC 8 cut(s) 149, 341, 892, 1145, 1411, 2167, 2258, 2767
BsgI GTGCAG 2 cut(s) 1208, 1785
Bsh1236I CGCG 2 cut(s) 2431, 2950
BshFI GGCC 6 cut(s) 297, 840, 972, 1363, 2506, 2893
BshTI ACCGGT 1 cut(s) 2509
BsiHKCI CYCGRG 1 cut(s) 2184
BsiSI CCGG 8 cut(s) 141, 270, 1461, 1792, 2385, 2510, 2571, 2894
BslFI GGGAC 2 cut(s) 82, 2505
BslI CCNNNNNNNGG 8 cut(s) 554, 618, 878, 958, 1381, 2513, 2577, 2963
BsmAI GTCTC 2 cut(s) 80, 858
BsmBI CGTCTC 1 cut(s) 80
BsmFI GGGAC 2 cut(s) 82, 2505
BsmI GAATGC 3 cut(s) 2280, 2491, 2992
BsnI GGCC 6 cut(s) 297, 840, 972, 1363, 2506, 2893
BsoBI CYCGRG 1 cut(s) 2184
Bsp119I TTCGAA 1 cut(s) 1660
Bsp1286I GDGCHC 2 cut(s) 198, 2906
Bsp68I TCGCGA 1 cut(s) 2950
BspACI CCGC 4 cut(s) 174, 191, 507, 1330
BspANI GGCC 6 cut(s) 297, 840, 972, 1363, 2506, 2893
BspCNI CTCAG 7 cut(s) 90, 750, 841, 1489, 1557, 1982, 2098
BspFNI CGCG 2 cut(s) 2431, 2950
BspHI TCATGA 1 cut(s) 591
BspLI GGNNCC 2 cut(s) 195, 2903
BspMAI CTGCAG 1 cut(s) 2891
BspMI ACCTGC 1 cut(s) 1122
BspOI GCTAGC 1 cut(s) 794
BspPI GGATC 9 cut(s) 523, 650, 970, 1200, 1471, 1641, 1848, 2478, 2658
BspQI GCTCTTC 1 cut(s) 2341
BspT104I TTCGAA 1 cut(s) 1660
BsrDI GCAATG 3 cut(s) 17, 253, 1986
BsrFI RCCGGY 2 cut(s) 2509, 2893
BsrI ACTGG 7 cut(s) 497, 648, 813, 973, 1492, 1930, 2377
BssAI RCCGGY 2 cut(s) 2509, 2893
BssECI CCNNGG 6 cut(s) 835, 1102, 1241, 1516, 1747, 1917
BssT1I CCWWGG 2 cut(s) 1102, 1747
Bst2UI CCWGG 4 cut(s) 837, 873, 1085, 1242
Bst4CI ACNGT 5 cut(s) 160, 464, 1822, 2167, 2946
Bst6I CTCTTC 2 cut(s) 891, 2341
BstAPI GCANNNNNTGC 1 cut(s) 19
BstBAI YACGTR 1 cut(s) 701
BstBI TTCGAA 1 cut(s) 1660
BstC8I GCNNGC 7 cut(s) 189, 505, 792, 796, 2073, 2332, 2891
BstF5I GGATG 4 cut(s) 149, 931, 2347, 2548
BstFNI CGCG 2 cut(s) 2431, 2950
BstHHI GCGC 1 cut(s) 2431
BstMAI GTCTC 2 cut(s) 80, 858
BstNI CCWGG 4 cut(s) 837, 873, 1085, 1242
BstNSI RCATGY 2 cut(s) 694, 2485
BstSCI CCNGG 6 cut(s) 268, 835, 871, 1083, 1240, 2569
BstSFI CTRYAG 2 cut(s) 1776, 2887
BstUI CGCG 2 cut(s) 2431, 2950
BstV1I GCAGC 8 cut(s) 149, 341, 892, 1145, 1411, 2167, 2258, 2767
BstX2I RGATCY 5 cut(s) 655, 1192, 1633, 1840, 2470
BstYI RGATCY 5 cut(s) 655, 1192, 1633, 1840, 2470
BsuI GTATCC 1 cut(s) 1136
BsuRI GGCC 6 cut(s) 297, 840, 972, 1363, 2506, 2893
BtgZI GCGATG 1 cut(s) 96
BtsCI GGATG 4 cut(s) 149, 931, 2347, 2548
BtsI GCAGTG 1 cut(s) 1773
BtsIMutI CAGTG 2 cut(s) 655, 1773
BtuMI TCGCGA 1 cut(s) 2950
BveI ACCTGC 1 cut(s) 1122
Cac8I GCNNGC 7 cut(s) 189, 505, 792, 796, 2073, 2332, 2891
CaiI CAGNNNCTG 2 cut(s) 1195, 3002
CciI TCATGA 1 cut(s) 591
CfoI GCGC 1 cut(s) 2431
Cfr10I RCCGGY 2 cut(s) 2509, 2893
Cfr13I GGNCC 5 cut(s) 296, 609, 839, 1361, 1490
CseI GACGC 1 cut(s) 1217
CsiI ACCWGGT 1 cut(s) 871
Csp6I GTAC 8 cut(s) 698, 1081, 1216, 1688, 1706, 2136, 2364, 2370
CspAI ACCGGT 1 cut(s) 2509
CviQI GTAC 8 cut(s) 698, 1081, 1216, 1688, 1706, 2136, 2364, 2370
DriI GACNNNNNGTC 1 cut(s) 850
EaeI YGGCCR 1 cut(s) 2504
Eam1104I CTCTTC 2 cut(s) 891, 2341
Eam1105I GACNNNNNGTC 1 cut(s) 850
EarI CTCTTC 2 cut(s) 891, 2341
EciI GGCGGA 2 cut(s) 522, 1345
Eco130I CCWWGG 2 cut(s) 1102, 1747
Eco24I GRGCYC 2 cut(s) 198, 2906
Eco32I GATATC 1 cut(s) 886
Eco47I GGWCC 2 cut(s) 609, 1490
Eco57I CTGAAG 4 cut(s) 222, 1713, 2781, 3027
Eco88I CYCGRG 1 cut(s) 2184
EcoO109I RGGNCCY 2 cut(s) 296, 609
EcoRI GAATTC 1 cut(s) 2323
EcoRII CCWGG 4 cut(s) 835, 871, 1083, 1240
EcoRV GATATC 1 cut(s) 886
EcoT14I CCWWGG 2 cut(s) 1102, 1747
EcoT22I ATGCAT 3 cut(s) 1878, 2349, 2493
EcoT38I GRGCYC 2 cut(s) 198, 2906
ErhI CCWWGG 2 cut(s) 1102, 1747
Esp3I CGTCTC 1 cut(s) 80
FalI AAGNNNNNCTT 8 cut(s) 39, 71, 1686, 1718, 2046, 2078, 2234, 2266
FaqI GGGAC 2 cut(s) 82, 2505
FauNDI CATATG 2 cut(s) 946, 2717
FbaI TGATCA 2 cut(s) 1270, 2767
Fnu4HI GCNGC 8 cut(s) 138, 330, 906, 1134, 1400, 2181, 2247, 2781
FokI GGATG 4 cut(s) 156, 938, 2334, 2555
FriOI GRGCYC 2 cut(s) 198, 2906
Fsp4HI GCNGC 8 cut(s) 138, 330, 906, 1134, 1400, 2181, 2247, 2781
FspBI CTAG 8 cut(s) 470, 695, 791, 1103, 1880, 2367, 2787, 2913
GlaI GCGC 1 cut(s) 2430
GluI GCNGC 8 cut(s) 138, 330, 906, 1134, 1400, 2181, 2247, 2781
GsuI CTGGAG 2 cut(s) 631, 2394
HaeIII GGCC 6 cut(s) 297, 840, 972, 1363, 2506, 2893
HapII CCGG 8 cut(s) 141, 270, 1461, 1792, 2385, 2510, 2571, 2894
HgaI GACGC 1 cut(s) 1217
HhaI GCGC 1 cut(s) 2431
Hin6I GCGC 1 cut(s) 2429
HinP1I GCGC 1 cut(s) 2429
HincII GTYRAC 3 cut(s) 460, 1885, 2191
HindII GTYRAC 3 cut(s) 460, 1885, 2191
HindIII AAGCTT 3 cut(s) 114, 2603, 2976
HpaII CCGG 8 cut(s) 141, 270, 1461, 1792, 2385, 2510, 2571, 2894
Hpy166II GTNNAC 9 cut(s) 460, 1216, 1831, 1885, 2036, 2095, 2191, 2599, 2659
Hpy8I GTNNAC 9 cut(s) 460, 1216, 1831, 1885, 2036, 2095, 2191, 2599, 2659
Hpy99I CGWCG 1 cut(s) 2950
HpyCH4III ACNGT 5 cut(s) 160, 464, 1822, 2167, 2946
HpyCH4IV ACGT 4 cut(s) 360, 700, 1686, 2016
HpySE526I ACGT 4 cut(s) 360, 700, 1686, 2016
HspAI GCGC 1 cut(s) 2429
Ksp22I TGATCA 2 cut(s) 1270, 2767
LguI GCTCTTC 1 cut(s) 2341
LmnI GCTCC 6 cut(s) 10, 193, 272, 2833, 2864, 2901
Lsp1109I GCAGC 8 cut(s) 149, 341, 892, 1145, 1411, 2167, 2258, 2767
LweI GCATC 8 cut(s) 793, 1145, 1593, 1856, 1885, 2356, 2478, 2767
MabI ACCWGGT 1 cut(s) 871
MaeI CTAG 8 cut(s) 470, 695, 791, 1103, 1880, 2367, 2787, 2913
MaeII ACGT 4 cut(s) 360, 700, 1686, 2016
MaeIII GTNAC 6 cut(s) 302, 488, 1300, 1427, 1501, 1921
MfeI CAATTG 1 cut(s) 1296
MflI RGATCY 5 cut(s) 655, 1192, 1633, 1840, 2470
MhlI GDGCHC 2 cut(s) 198, 2906
MlsI TGGCCA 1 cut(s) 2506
MluNI TGGCCA 1 cut(s) 2506
MlyI GAGTC 8 cut(s) 64, 299, 839, 860, 2051, 2196, 2701, 2752
MmeI TCCRAC 3 cut(s) 142, 425, 511
Mox20I TGGCCA 1 cut(s) 2506
Mph1103I ATGCAT 3 cut(s) 1878, 2349, 2493
MroXI GAANNNNTTC 6 cut(s) 51, 577, 732, 1337, 1666, 2323
MscI TGGCCA 1 cut(s) 2506
MseI TTAA 8 cut(s) 27, 255, 1683, 1937, 1956, 2211, 2636, 2835
MslI CAYNNNNRTG 3 cut(s) 1116, 2486, 2500
Msp20I TGGCCA 1 cut(s) 2506
MspA1I CMGCKG 1 cut(s) 191
MspI CCGG 8 cut(s) 141, 270, 1461, 1792, 2385, 2510, 2571, 2894
MspR9I CCNGG 6 cut(s) 270, 837, 873, 1085, 1242, 2571
MunI CAATTG 1 cut(s) 1296
Mva1269I GAATGC 3 cut(s) 2280, 2491, 2992
MvaI CCWGG 4 cut(s) 837, 873, 1085, 1242
MvnI CGCG 2 cut(s) 2431, 2950
NciI CCSGG 2 cut(s) 270, 2571
NdeI CATATG 2 cut(s) 946, 2717
NheI GCTAGC 1 cut(s) 790
NlaIV GGNNCC 2 cut(s) 195, 2903
NmeAIII GCCGAG 2 cut(s) 1247, 1541
NmuCI GTSAC 4 cut(s) 302, 488, 1300, 1921
NruI TCGCGA 1 cut(s) 2950
NsiI ATGCAT 3 cut(s) 1878, 2349, 2493
NspI RCATGY 2 cut(s) 694, 2485
NspV TTCGAA 1 cut(s) 1660
PaeR7I CTCGAG 1 cut(s) 2184
PagI TCATGA 1 cut(s) 591
PaqCI CACCTGC 1 cut(s) 1122
PciI ACATGT 1 cut(s) 2481
PciSI GCTCTTC 1 cut(s) 2341
PcsI WCGNNNNNNNCGW 1 cut(s) 1683
PctI GAATGC 3 cut(s) 2280, 2491, 2992
PdmI GAANNNNTTC 6 cut(s) 51, 577, 732, 1337, 1666, 2323
PfeI GAWTC 5 cut(s) 749, 910, 1759, 2759, 2792
PflMI CCANNNNNTGG 2 cut(s) 2513, 2963
PinAI ACCGGT 1 cut(s) 2509
PkrI GCNGC 8 cut(s) 139, 331, 907, 1135, 1401, 2182, 2248, 2782
PleI GAGTC 8 cut(s) 64, 299, 839, 859, 2051, 2195, 2700, 2751
PpsI GAGTC 8 cut(s) 64, 299, 839, 859, 2051, 2195, 2700, 2751
Ppu21I YACGTR 1 cut(s) 701
PpuMI RGGWCCY 1 cut(s) 609
PscI ACATGT 1 cut(s) 2481
PsiI TTATAA 1 cut(s) 1617
Psp5II RGGWCCY 1 cut(s) 609
Psp6I CCWGG 4 cut(s) 835, 871, 1083, 1240
PspGI CCWGG 4 cut(s) 835, 871, 1083, 1240
PspN4I GGNNCC 2 cut(s) 195, 2903
PspPI GGNCC 5 cut(s) 296, 609, 839, 1361, 1490
PspPPI RGGWCCY 1 cut(s) 609
PspXI VCTCGAGB 1 cut(s) 2184
PsrI GAACNNNNNNTAC 2 cut(s) 690, 722
PstI CTGCAG 1 cut(s) 2891
PstNI CAGNNNCTG 2 cut(s) 1195, 3002
PsuI RGATCY 5 cut(s) 655, 1192, 1633, 1840, 2470
RruI TCGCGA 1 cut(s) 2950
RsaI GTAC 8 cut(s) 699, 1082, 1217, 1689, 1707, 2137, 2365, 2371
RsaNI GTAC 8 cut(s) 698, 1081, 1216, 1688, 1706, 2136, 2364, 2370
RseI CAYNNNNRTG 3 cut(s) 1116, 2486, 2500
SapI GCTCTTC 1 cut(s) 2341
SaqAI TTAA 8 cut(s) 27, 255, 1683, 1937, 1956, 2211, 2636, 2835
SatI GCNGC 8 cut(s) 138, 330, 906, 1134, 1400, 2181, 2247, 2781
Sau96I GGNCC 5 cut(s) 296, 609, 839, 1361, 1490
ScaI AGTACT 2 cut(s) 2365, 2371
SchI GAGTC 8 cut(s) 64, 299, 839, 860, 2051, 2196, 2701, 2752
ScrFI CCNGG 6 cut(s) 270, 837, 873, 1085, 1242, 2571
SduI GDGCHC 2 cut(s) 198, 2906
SexAI ACCWGGT 1 cut(s) 871
SfaNI GCATC 8 cut(s) 793, 1145, 1593, 1856, 1885, 2356, 2478, 2767
SfcI CTRYAG 2 cut(s) 1776, 2887
Sfr274I CTCGAG 1 cut(s) 2184
SfuI TTCGAA 1 cut(s) 1660
SinI GGWCC 2 cut(s) 609, 1490
SlaI CTCGAG 1 cut(s) 2184
SmiMI CAYNNNNRTG 3 cut(s) 1116, 2486, 2500
SmlI CTYRAG 2 cut(s) 2184, 2606
SmoI CTYRAG 2 cut(s) 2184, 2606
SpeI ACTAGT 2 cut(s) 2366, 2786
SsiI CCGC 4 cut(s) 174, 191, 507, 1330
SspI AATATT 1 cut(s) 1018
SspMI CTAG 8 cut(s) 470, 695, 791, 1103, 1880, 2367, 2787, 2913
StyD4I CCNGG 6 cut(s) 268, 835, 871, 1083, 1240, 2569
StyI CCWWGG 2 cut(s) 1102, 1747
TaaI ACNGT 5 cut(s) 160, 464, 1822, 2167, 2946
TaiI ACGT 4 cut(s) 363, 703, 1689, 2019
TaqI TCGA 2 cut(s) 1660, 2185
TaqII GACCGA 2 cut(s) 1401, 1507
TatI WGTACW 3 cut(s) 1215, 2363, 2369
TfiI GAWTC 5 cut(s) 749, 910, 1759, 2759, 2792
Tru1I TTAA 8 cut(s) 27, 255, 1683, 1937, 1956, 2211, 2636, 2835
Tru9I TTAA 8 cut(s) 27, 255, 1683, 1937, 1956, 2211, 2636, 2835
TscAI CASTG 2 cut(s) 655, 1773
TseFI GTSAC 4 cut(s) 302, 488, 1300, 1921
TseI GCWGC 8 cut(s) 137, 329, 905, 1133, 1399, 2180, 2246, 2780
Tsp45I GTSAC 4 cut(s) 302, 488, 1300, 1921
TspGWI ACGGA 5 cut(s) 23, 1585, 1848, 2010, 2420
TspRI CASTG 2 cut(s) 655, 1773
Van91I CCANNNNNTGG 2 cut(s) 2513, 2963
VpaK11BI GGWCC 2 cut(s) 609, 1490
XceI RCATGY 2 cut(s) 694, 2485
XcmI CCANNNNNNNNNTGG 2 cut(s) 2060, 2811
XhoI CTCGAG 1 cut(s) 2184
XmaJI CCTAGG 1 cut(s) 1102
XmnI GAANNNNTTC 6 cut(s) 51, 577, 732, 1337, 1666, 2323
XspI CTAG 8 cut(s) 470, 695, 791, 1103, 1880, 2367, 2787, 2913
ZrmI AGTACT 2 cut(s) 2365, 2371
Zsp2I ATGCAT 3 cut(s) 1878, 2349, 2493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.