Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0001083

Physical Location & Seq

Genomic Coordinates Reverse (-)

6038489 .. 6044232

Gene Structure 5744 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG075200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGGCAACGGAGCAATCATTGCCTTTTAATGTTGCTTCTGTGGTTGAAGCCGTTCTTCAACAGCATGGGACTCGTCTCAGCGATGTGGGATTGGCTTCAAGGAAGGCAGAGGAAGCTTCTGTGAGAAGGTATGAAGCAGCTGGGTGGCTTAGAAAGACGGTTGGAGTGGTGGGCGGTAAAGATTTGCCAGCTGAGCCCTCTGAAGAAGATTTTAGGCTTGGATTACGAAGTGGAATAATCCTTTGCAATGTTATTAACAAGGTTCAACCCGGAGCTGTGGCAAAGGTTGTTGAAGGCCCTTGTGACTCCGTGCCTATTCCTGATGGGGCAGCACTATCAGCATTTCAGTACTTCGAAAACGTCAGAAATTTCCTTGTGGCTGTGGAGGAATTGGGGCTTCCAACCTTTGAAGCCTCTGATTTGGAACAGACTGGACCGACTGAGGTTACGGAAGAAAGCCGAGGTGTAAATTACAGAGCATTGGGTGATCTATTTCAATTATCAGAACTGAGAAAGGACACCATTCGCTATGAAATTTCCGTTCAGATGCTTGAAATTTATAACGAGCAACTTACATTAGAAATTCGAAATAGTTCTCAAAACGGCATTAACGTACCTGAAGCGAACCTTGTACCTGTATCATCAACATCTGATGTTATATATTTGATGAACCTTGGGCATAAGAATCGTGCAGTGAGTTCTACAGCCATGAATGACCGGAGTAGTCGTTCCCATAGTTGCTTGACAGTTCATGTTCACGGAAGGGATCTGGCATCTGGAAGTATTCTTCGTGGTTGTATGCATCTAGTTGACTTAGCAGGAAGCGAAAGAGTTGATAAATCCGAGGTGACTGGTGATAGATTAAAGGAGGCACAACATATTAACAAATCTCTCTCAGCTTTAGGAGATGTCATTGCCTCTCTTGCTCAAAAGAATTCACACGTTCCGTATAGAAATAGTAAACTCACACAACTACTCCAAGACTCACTTGGAGGGCAAGCAAAGACACTCATGTTTGTTCACATTAGTCCTGAGTATGAAGCTCTTGGAGAAACATTGAGTACCCTCAAGTTTGCAGAACGGGTTTCCACAGTTGAACTTGGTGCTGCTCGAGTCAACAAAGATGGTGCAAATGTTAAAGAGCTGAAAGAACAGATTGCTACTCTGAAGGCAGCCCTAGCACGAAAAGAAGGTGAGGGAATGCAGTTGAAAAATTCGCTCTCCCTAAGCCCTGAAAGATTTAGAATGAATTCTGCTGGCTCTTCGCCTATGCATCCAAGAGGAAAAAGTACTGGAGATTTTTCCGGTGGTCGTAAGCAACCGACGGAGGATTTTGGAAATATAGAGGCTCGTAAAACCTCTACATCAAAGCCAAAAAGGCGAAGTTTGGATCTTCAAGACATGTTGATGCATTCACCTTCATGGCCACCGGTTGGTAGTCCCAAAGTGAATGGAAAAGAGGATGATAAGGAGTTATTTTCATCAATTCCCGGTGATTGGGTTGATAAGGTGATGGTGAACAAGCTTGAGAGTAAAAGTAGAGAACAAAGTCCATTAAGATCATGTTGGGATCATGTGGACAACAGACAGCTACCAGAGATGTTTGGTCAGAGTCGCCTCTCACACCCTTCCATCATATGTTCGACGACAAATAAGGAGGAGAGTCAAGACTTTGACGAATCTGATGATCAACTTGATGCTGCAACTAGTGATTCTTCAGAGCCAGACACGCTTTGGCAACTGAATGCTCCTATTAAAGCTACAAACATTCCAAATGGGTTGGGGGCAAAACCGAAGAAAACCAACTGCAGGCCGGTAAGGAGCCCAGAAACTAGAAGTTTCATTCCATCACTAATTCCTTCACCGTCGCGAAAACCACCCAATGGTGTTAGTCAAGCTTTGCCTAAGAGGCATTCAGTTTCTGCTGAAGGCAAGCGAAGGTATGGGAGTGCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0007097 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009987 GO:0015629 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031534 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043621 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0046907 GO:0051012 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

652

Amino Acids

71.28

Weight (kDa)

6.94

Isoelectric Point (pI)

57.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	43 - 145	1.6e-10	Calponin homology (CH) domain
Kinesin	PF00225	150 - 364	6.9e-71	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09170 AT1G09170 AT1G09170 AT1G09170 AT1G09170 AT1G09170 AT1G09170 AT1G09170 AT5G27000
fragaria_vesca	FvH4_2g14960 FvH4_6g07070 FvH4_6g07070 FvH4_6g07070 FvH4_6g07070 FvH4_6g07070
malus_domestica	MD04G1196400.v1.1 MD12G1209400.v1.1
prunus_persica	Prupe.6G316600_v2.0.a1
pyrus_communis	pycom12g19670
rosa_chinensis	RchiOBHm_Chr1g0318271 RchiOBHm_Chr2g0102121 RchiOBHm_Chr2g0167941 RchiOBHm_Chr3g0456621 RchiOBHm_Chr3g0456641 RchiOBHm_Chr5g0067221
rosa_laevigata	RLG00000003185 RLG00000003285 RLG00000003859 RLG00000003890 RLG00000025287 RLG00000033013
rosa_multiflora	Rmu_sc0000133.1_g000037 Rmu_sc0000894.1_g000040 Rmu_sc0001563.1_g000026 Rmu_sc0007742.1_g000030 Rmu_sc0012002.1_g000001
rosa_roxburghii	Rroxscaffold_2G00120300 Rroxscaffold_2G00132430 Rroxscaffold_5G00367570 Rroxscaffold_6G00422580 Rroxscaffold_7G00200730
rosa_rugosa	Rorug03G0014400 Rorug05G0465400 Rorug05G0465500
rosa_samantha	Rh1AG324900 Rh1CG231300 Rh2AG394600 Rh3AG075200 Rh3BG077100 Rh3CG076700 Rh3CG076800 Rh3DG078700 Rh5BG530400 Rh5CG554800 Rh6AG058800
rosa_wichuraiana	Rw3G006440 Rw4G008320 Rw5G014820 Rw7G027120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	561
AccB7I	CCANNNNNTGG	2 cut(s)	1433, 1883
AccII	CGCG	1 cut(s)	1870
AciI	CCGC	1 cut(s)	174
AclWI	GGATC	3 cut(s)	774, 1398, 1578
AcoI	YGGCCR	1 cut(s)	1424
AcsI	RAATTY	7 cut(s)	367, 534, 555, 582, 934, 1213, 1249
AcuI	CTGAAG	5 cut(s)	222, 639, 1187, 1701, 1947
AfaI	GTAC	5 cut(s)	350, 615, 633, 1063, 1291
AfiI	CCNNNNNNNGG	4 cut(s)	1433, 1497, 1809, 1883
AflIII	ACRYGT	2 cut(s)	940, 1401
AgeI	ACCGGT	1 cut(s)	1429
AhlI	ACTAGT	1 cut(s)	1706
AloI	GAACNNNNNNTCC	2 cut(s)	712, 744
Alw26I	GTCTC	1 cut(s)	80
AlwI	GGATC	3 cut(s)	774, 1398, 1578
AlwNI	CAGNNNCTG	1 cut(s)	1922
Ama87I	CYCGRG	1 cut(s)	1110
AoxI	GGCC	3 cut(s)	295, 1424, 1811
ApeKI	GCWGC	5 cut(s)	137, 329, 1106, 1172, 1700
ApoI	RAATTY	7 cut(s)	367, 534, 555, 582, 934, 1213, 1249
AsiGI	ACCGGT	1 cut(s)	1429
Asp700I	GAANNNNTTC	3 cut(s)	51, 592, 1249
AspS9I	GGNCC	2 cut(s)	296, 434
AsuC2I	CCSGG	2 cut(s)	270, 1491
AsuHPI	GGTGA	9 cut(s)	497, 859, 866, 1205, 1407, 1505, 1522, 1528, 1854
AsuII	TTCGAA	2 cut(s)	354, 586
AvaI	CYCGRG	1 cut(s)	1110
AvaII	GGWCC	1 cut(s)	434
BalI	TGGCCA	1 cut(s)	1426
BanII	GRGCYC	2 cut(s)	198, 1826
BbvI	GCAGC	5 cut(s)	149, 341, 1093, 1184, 1687
BccI	CCATC	5 cut(s)	317, 1118, 1507, 1640, 1855
BceAI	ACGGC	2 cut(s)	35, 619
BcgI	CGANNNNNNTGC	4 cut(s)	53, 87, 668, 702
BclI	TGATCA	1 cut(s)	1687
BcnI	CCSGG	2 cut(s)	270, 1491
BcoDI	GTCTC	1 cut(s)	80
BcuI	ACTAGT	1 cut(s)	1706
BfaI	CTAG	4 cut(s)	806, 1178, 1707, 1833
BfmI	CTRYAG	2 cut(s)	702, 1807
BglI	GCCNNNNNGGC	2 cut(s)	1378, 1909
BisI	GCNGC	5 cut(s)	138, 330, 1107, 1173, 1701
BlpI	GCTNAGC	1 cut(s)	192
BlsI	GCNGC	5 cut(s)	139, 331, 1108, 1174, 1702
BmcAI	AGTACT	2 cut(s)	350, 1291
Bme1390I	CCNGG	2 cut(s)	270, 1491
Bme18I	GGWCC	1 cut(s)	434
BmeT110I	CYCGRG	1 cut(s)	1110
BmgT120I	GGNCC	2 cut(s)	296, 434
BmiI	GGNNCC	1 cut(s)	1823
BmrFI	CCNGG	2 cut(s)	270, 1491
BmsI	GCATC	6 cut(s)	537, 782, 811, 1282, 1398, 1687
BpmI	CTGGAG	1 cut(s)	1314
Bpu10I	CCTNAGC	1 cut(s)	1226
Bpu1102I	GCTNAGC	1 cut(s)	192
Bpu14I	TTCGAA	2 cut(s)	354, 586
BpuEI	CTTGAG	2 cut(s)	1052, 1547
BpuMI	CCSGG	2 cut(s)	270, 1491
BsaJI	CCNNGG	3 cut(s)	460, 673, 843
BsaWI	WCCGGW	3 cut(s)	717, 1304, 1429
BsaXI	ACNNNNNCTCC	4 cut(s)	712, 742, 960, 990
Bsc4I	CCNNNNNNNGG	4 cut(s)	1433, 1497, 1809, 1883
Bse118I	RCCGGY	2 cut(s)	1429, 1813
Bse1I	ACTGG	3 cut(s)	436, 856, 1297
Bse3DI	GCAATG	3 cut(s)	17, 253, 912
BseDI	CCNNGG	3 cut(s)	460, 673, 843
BseGI	GGATG	2 cut(s)	1273, 1468
BseLI	CCNNNNNNNGG	4 cut(s)	1433, 1497, 1809, 1883
BseMI	GCAATG	3 cut(s)	17, 253, 912
BseMII	CTCAG	6 cut(s)	91, 183, 432, 500, 909, 1023
BseNI	ACTGG	3 cut(s)	436, 856, 1297
BseRI	GAGGAG	1 cut(s)	1673
BseXI	GCAGC	5 cut(s)	149, 341, 1093, 1184, 1687
BseYI	CCCAGC	1 cut(s)	140
BsgI	GTGCAG	1 cut(s)	711
Bsh1236I	CGCG	1 cut(s)	1870
BshFI	GGCC	3 cut(s)	297, 1426, 1813
BshTI	ACCGGT	1 cut(s)	1429
BsiHKCI	CYCGRG	1 cut(s)	1110
BsiSI	CCGG	6 cut(s)	270, 718, 1305, 1430, 1491, 1814
BslFI	GGGAC	2 cut(s)	82, 1425
BslI	CCNNNNNNNGG	4 cut(s)	1433, 1497, 1809, 1883
BsmAI	GTCTC	1 cut(s)	80
BsmBI	CGTCTC	1 cut(s)	80
BsmFI	GGGAC	2 cut(s)	82, 1425
BsmI	GAATGC	4 cut(s)	1206, 1411, 1750, 1912
BsnI	GGCC	3 cut(s)	297, 1426, 1813
BsoBI	CYCGRG	1 cut(s)	1110
Bsp119I	TTCGAA	2 cut(s)	354, 586
Bsp1286I	GDGCHC	2 cut(s)	198, 1826
Bsp143I	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
Bsp1720I	GCTNAGC	1 cut(s)	192
Bsp68I	TCGCGA	1 cut(s)	1870
BspACI	CCGC	1 cut(s)	174
BspANI	GGCC	3 cut(s)	297, 1426, 1813
BspCNI	CTCAG	6 cut(s)	90, 184, 433, 501, 908, 1024
BspFNI	CGCG	1 cut(s)	1870
BspLI	GGNNCC	1 cut(s)	1823
BspMAI	CTGCAG	1 cut(s)	1811
BspPI	GGATC	3 cut(s)	774, 1398, 1578
BspQI	GCTCTTC	1 cut(s)	1267
BspT104I	TTCGAA	2 cut(s)	354, 586
BsrDI	GCAATG	3 cut(s)	17, 253, 912
BsrFI	RCCGGY	2 cut(s)	1429, 1813
BsrI	ACTGG	3 cut(s)	436, 856, 1297
BssAI	RCCGGY	2 cut(s)	1429, 1813
BssECI	CCNNGG	3 cut(s)	460, 673, 843
BssMI	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
BssT1I	CCWWGG	1 cut(s)	673
Bst4CI	ACNGT	4 cut(s)	160, 748, 1093, 1866
Bst6I	CTCTTC	1 cut(s)	1267
BstAPI	GCANNNNNTGC	1 cut(s)	19
BstBI	TTCGAA	2 cut(s)	354, 586
BstC8I	GCNNGC	5 cut(s)	189, 999, 1258, 1811, 1934
BstF5I	GGATG	2 cut(s)	1273, 1468
BstFNI	CGCG	1 cut(s)	1870
BstKTI	GATC	6 cut(s)	490, 769, 1393, 1562, 1573, 1690
BstMAI	GTCTC	1 cut(s)	80
BstMBI	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
BstMWI	GCNNNNNNNGC	9 cut(s)	19, 113, 193, 338, 923, 1178, 1378, 1729, 1909
BstNSI	RCATGY	1 cut(s)	1405
BstSCI	CCNGG	2 cut(s)	268, 1489
BstSFI	CTRYAG	2 cut(s)	702, 1807
BstUI	CGCG	1 cut(s)	1870
BstV1I	GCAGC	5 cut(s)	149, 341, 1093, 1184, 1687
BstX2I	RGATCY	2 cut(s)	766, 1390
BstYI	RGATCY	2 cut(s)	766, 1390
BsuRI	GGCC	3 cut(s)	297, 1426, 1813
BtgZI	GCGATG	1 cut(s)	96
BtsCI	GGATG	2 cut(s)	1273, 1468
BtsI	GCAGTG	1 cut(s)	699
BtsIMutI	CAGTG	1 cut(s)	699
BtuMI	TCGCGA	1 cut(s)	1870
Cac8I	GCNNGC	5 cut(s)	189, 999, 1258, 1811, 1934
CaiI	CAGNNNCTG	1 cut(s)	1922
Cfr10I	RCCGGY	2 cut(s)	1429, 1813
Cfr13I	GGNCC	2 cut(s)	296, 434
Csp6I	GTAC	5 cut(s)	349, 614, 632, 1062, 1290
CspAI	ACCGGT	1 cut(s)	1429
CviAII	CATG	8 cut(s)	65, 709, 752, 1012, 1402, 1422, 1563, 1574
CviQI	GTAC	5 cut(s)	349, 614, 632, 1062, 1290
DpnI	GATC	6 cut(s)	489, 768, 1392, 1561, 1572, 1689
DpnII	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
EaeI	YGGCCR	1 cut(s)	1424
Eam1104I	CTCTTC	1 cut(s)	1267
EarI	CTCTTC	1 cut(s)	1267
Eco130I	CCWWGG	1 cut(s)	673
Eco24I	GRGCYC	2 cut(s)	198, 1826
Eco47I	GGWCC	1 cut(s)	434
Eco57I	CTGAAG	5 cut(s)	222, 639, 1187, 1701, 1947
Eco88I	CYCGRG	1 cut(s)	1110
EcoO109I	RGGNCCY	1 cut(s)	296
EcoRI	GAATTC	2 cut(s)	934, 1249
EcoT14I	CCWWGG	1 cut(s)	673
EcoT22I	ATGCAT	3 cut(s)	804, 1275, 1413
EcoT38I	GRGCYC	2 cut(s)	198, 1826
ErhI	CCWWGG	1 cut(s)	673
Esp3I	CGTCTC	1 cut(s)	80
FaeI	CATG	8 cut(s)	68, 712, 755, 1015, 1405, 1425, 1566, 1577
FalI	AAGNNNNNCTT	6 cut(s)	39, 71, 612, 644, 972, 1004
FaqI	GGGAC	2 cut(s)	82, 1425
FatI	CATG	8 cut(s)	64, 708, 751, 1011, 1401, 1421, 1562, 1573
FauNDI	CATATG	1 cut(s)	1637
FbaI	TGATCA	1 cut(s)	1687
Fnu4HI	GCNGC	5 cut(s)	138, 330, 1107, 1173, 1701
FokI	GGATG	2 cut(s)	1260, 1475
FriOI	GRGCYC	2 cut(s)	198, 1826
Fsp4HI	GCNGC	5 cut(s)	138, 330, 1107, 1173, 1701
FspBI	CTAG	4 cut(s)	806, 1178, 1707, 1833
GluI	GCNGC	5 cut(s)	138, 330, 1107, 1173, 1701
GsaI	CCCAGC	1 cut(s)	144
GsuI	CTGGAG	1 cut(s)	1314
HaeIII	GGCC	3 cut(s)	297, 1426, 1813
HapII	CCGG	6 cut(s)	270, 718, 1305, 1430, 1491, 1814
Hin1II	CATG	8 cut(s)	68, 712, 755, 1015, 1405, 1425, 1566, 1577
HincII	GTYRAC	2 cut(s)	811, 1117
HindII	GTYRAC	2 cut(s)	811, 1117
HindIII	AAGCTT	3 cut(s)	114, 1523, 1896
HinfI	GANTC	9 cut(s)	70, 305, 685, 983, 1113, 1612, 1663, 1679, 1712
HpaII	CCGG	6 cut(s)	270, 718, 1305, 1430, 1491, 1814
HphI	GGTGA	9 cut(s)	497, 859, 866, 1205, 1407, 1505, 1522, 1528, 1854
Hpy166II	GTNNAC	7 cut(s)	757, 811, 962, 1021, 1117, 1519, 1579
Hpy188III	TCNNGA	6 cut(s)	320, 777, 1031, 1397, 1667, 1869
Hpy8I	GTNNAC	7 cut(s)	757, 811, 962, 1021, 1117, 1519, 1579
Hpy99I	CGWCG	3 cut(s)	1327, 1648, 1870
HpyCH4III	ACNGT	4 cut(s)	160, 748, 1093, 1866
HpyCH4IV	ACGT	3 cut(s)	360, 612, 942
HpyF10VI	GCNNNNNNNGC	9 cut(s)	19, 113, 193, 338, 923, 1178, 1378, 1729, 1909
HpySE526I	ACGT	3 cut(s)	360, 612, 942
Hsp92II	CATG	8 cut(s)	68, 712, 755, 1015, 1405, 1425, 1566, 1577
Ksp22I	TGATCA	1 cut(s)	1687
Kzo9I	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
LguI	GCTCTTC	1 cut(s)	1267
LmnI	GCTCC	4 cut(s)	10, 272, 1753, 1821
Lsp1109I	GCAGC	5 cut(s)	149, 341, 1093, 1184, 1687
LweI	GCATC	6 cut(s)	537, 782, 811, 1282, 1398, 1687
MaeI	CTAG	4 cut(s)	806, 1178, 1707, 1833
MaeII	ACGT	3 cut(s)	360, 612, 942
MaeIII	GTNAC	3 cut(s)	302, 445, 847
MalI	GATC	6 cut(s)	489, 768, 1392, 1561, 1572, 1689
MboI	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
MboII	GAAGA	9 cut(s)	47, 215, 218, 464, 779, 1254, 1385, 1707, 1807
MflI	RGATCY	2 cut(s)	766, 1390
MhlI	GDGCHC	2 cut(s)	198, 1826
MlsI	TGGCCA	1 cut(s)	1426
MluNI	TGGCCA	1 cut(s)	1426
MlyI	GAGTC	6 cut(s)	64, 299, 977, 1122, 1621, 1672
MmeI	TCCRAC	2 cut(s)	142, 425
Mox20I	TGGCCA	1 cut(s)	1426
Mph1103I	ATGCAT	3 cut(s)	804, 1275, 1413
MroXI	GAANNNNTTC	3 cut(s)	51, 592, 1249
MscI	TGGCCA	1 cut(s)	1426
MseI	TTAA	8 cut(s)	27, 255, 609, 863, 882, 1137, 1556, 1755
MslI	CAYNNNNRTG	2 cut(s)	1406, 1420
Msp20I	TGGCCA	1 cut(s)	1426
MspA1I	CMGCKG	2 cut(s)	140, 191
MspI	CCGG	6 cut(s)	270, 718, 1305, 1430, 1491, 1814
MspR9I	CCNGG	2 cut(s)	270, 1491
Mva1269I	GAATGC	4 cut(s)	1206, 1411, 1750, 1912
MvnI	CGCG	1 cut(s)	1870
MwoI	GCNNNNNNNGC	9 cut(s)	19, 113, 193, 338, 923, 1178, 1378, 1729, 1909
NciI	CCSGG	2 cut(s)	270, 1491
NdeI	CATATG	1 cut(s)	1637
NdeII	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
NlaIII	CATG	8 cut(s)	68, 712, 755, 1015, 1405, 1425, 1566, 1577
NlaIV	GGNNCC	1 cut(s)	1823
NmeAIII	GCCGAG	1 cut(s)	485
NmuCI	GTSAC	2 cut(s)	302, 847
NruI	TCGCGA	1 cut(s)	1870
NsiI	ATGCAT	3 cut(s)	804, 1275, 1413
NspI	RCATGY	1 cut(s)	1405
NspV	TTCGAA	2 cut(s)	354, 586
PaeR7I	CTCGAG	1 cut(s)	1110
PciI	ACATGT	1 cut(s)	1401
PciSI	GCTCTTC	1 cut(s)	1267
PcsI	WCGNNNNNNNCGW	1 cut(s)	609
PctI	GAATGC	4 cut(s)	1206, 1411, 1750, 1912
PdmI	GAANNNNTTC	3 cut(s)	51, 592, 1249
PfeI	GAWTC	3 cut(s)	685, 1679, 1712
PflMI	CCANNNNNTGG	2 cut(s)	1433, 1883
PinAI	ACCGGT	1 cut(s)	1429
PkrI	GCNGC	5 cut(s)	139, 331, 1108, 1174, 1702
PleI	GAGTC	6 cut(s)	64, 299, 977, 1121, 1620, 1671
PpsI	GAGTC	6 cut(s)	64, 299, 977, 1121, 1620, 1671
PscI	ACATGT	1 cut(s)	1401
PsiI	TTATAA	1 cut(s)	561
PspFI	CCCAGC	1 cut(s)	140
PspN4I	GGNNCC	1 cut(s)	1823
PspPI	GGNCC	2 cut(s)	296, 434
PspXI	VCTCGAGB	1 cut(s)	1110
PstI	CTGCAG	1 cut(s)	1811
PstNI	CAGNNNCTG	1 cut(s)	1922
PsuI	RGATCY	2 cut(s)	766, 1390
PvuII	CAGCTG	2 cut(s)	140, 191
RruI	TCGCGA	1 cut(s)	1870
RsaI	GTAC	5 cut(s)	350, 615, 633, 1063, 1291
RsaNI	GTAC	5 cut(s)	349, 614, 632, 1062, 1290
RseI	CAYNNNNRTG	2 cut(s)	1406, 1420
SapI	GCTCTTC	1 cut(s)	1267
SaqAI	TTAA	8 cut(s)	27, 255, 609, 863, 882, 1137, 1556, 1755
SatI	GCNGC	5 cut(s)	138, 330, 1107, 1173, 1701
Sau3AI	GATC	6 cut(s)	487, 766, 1390, 1559, 1570, 1687
Sau96I	GGNCC	2 cut(s)	296, 434
ScaI	AGTACT	2 cut(s)	350, 1291
SchI	GAGTC	6 cut(s)	64, 299, 977, 1122, 1621, 1672
ScrFI	CCNGG	2 cut(s)	270, 1491
SduI	GDGCHC	2 cut(s)	198, 1826
SfaNI	GCATC	6 cut(s)	537, 782, 811, 1282, 1398, 1687
SfcI	CTRYAG	2 cut(s)	702, 1807
Sfr274I	CTCGAG	1 cut(s)	1110
SfuI	TTCGAA	2 cut(s)	354, 586
SinI	GGWCC	1 cut(s)	434
SlaI	CTCGAG	1 cut(s)	1110
SmiMI	CAYNNNNRTG	2 cut(s)	1406, 1420
SmlI	CTYRAG	3 cut(s)	1067, 1110, 1526
SmoI	CTYRAG	3 cut(s)	1067, 1110, 1526
SpeI	ACTAGT	1 cut(s)	1706
SsiI	CCGC	1 cut(s)	174
SspMI	CTAG	4 cut(s)	806, 1178, 1707, 1833
StyD4I	CCNGG	2 cut(s)	268, 1489
StyI	CCWWGG	1 cut(s)	673
TaaI	ACNGT	4 cut(s)	160, 748, 1093, 1866
TaiI	ACGT	3 cut(s)	363, 615, 945
TaqI	TCGA	4 cut(s)	354, 586, 1111, 1643
TaqII	GACCGA	1 cut(s)	451
TatI	WGTACW	2 cut(s)	348, 1289
TfiI	GAWTC	3 cut(s)	685, 1679, 1712
Tru1I	TTAA	8 cut(s)	27, 255, 609, 863, 882, 1137, 1556, 1755
Tru9I	TTAA	8 cut(s)	27, 255, 609, 863, 882, 1137, 1556, 1755
TscAI	CASTG	1 cut(s)	699
TseFI	GTSAC	2 cut(s)	302, 847
TseI	GCWGC	5 cut(s)	137, 329, 1106, 1172, 1700
Tsp45I	GTSAC	2 cut(s)	302, 847
TspGWI	ACGGA	7 cut(s)	23, 298, 464, 529, 774, 936, 1340
TspRI	CASTG	1 cut(s)	699
Van91I	CCANNNNNTGG	2 cut(s)	1433, 1883
VpaK11BI	GGWCC	1 cut(s)	434
XapI	RAATTY	7 cut(s)	367, 534, 555, 582, 934, 1213, 1249
XceI	RCATGY	1 cut(s)	1405
XcmI	CCANNNNNNNNNTGG	2 cut(s)	986, 1731
XhoI	CTCGAG	1 cut(s)	1110
XmnI	GAANNNNTTC	3 cut(s)	51, 592, 1249
XspI	CTAG	4 cut(s)	806, 1178, 1707, 1833
ZrmI	AGTACT	2 cut(s)	350, 1291
Zsp2I	ATGCAT	3 cut(s)	804, 1275, 1413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.