MD05G1204800.v1.1

Magnesium transporter MRS2-I-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
33430623 .. 33433900
3278 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1204800.v1.1.491

Sequence Viewer

Length: 1221 bp
ATGTTAGCTCTGGAAATGGCCCGGGATGAGCTGCTGGTCCCGGCGCCGGAGGACACTGCTCAGACGCAGGCTCAAGCCTCTGCCGCCAGCAAGAAAAAAACTGCAGCTTTGAGAAGCTGGATTTCGCTGGACCATGACGGGCAGGGAACGGTTTTGGATTTGGACAAGCACGCCATTATCCACCGAGTTCAGATTCACGCTCGAGATCTTCGGCTTCTCGATCCATTGTTATCGTATCCTTCTACAATCTTGGGCAGAGAGAAAGTGATTGTTCTTAATTTGGAGCACATCAAAGCAATAATCACAGCGGATGAGGTACTGCTTAGAGACCCGTTTGATGATACTGTACTTCCCATCGTTAAGGAGCTTCAAAGGCGTTTGCCTCTGTCAAGTACCAATTTCAATGGCCAAGGAGAAGAAGAAGACGCTTCTGGGGTACAAAAAGATGAAACTGATGAGGAAAATGAATTCCCATTCGAATTCCGAGCTTTAGAAGTTGCACTAGAAGGTATCTGTAGTTTTCTTGATGCGCAGACTAGAGTTCTAGAGGCTGATGCTTATCCGGCTTTAGATGAGCTGACCTCCAAGATTAGCAGTCGTAATTTGGATCGTGTTCGGAAGTTGAAGAGTGCAATGACCAGGTTGACAAATCGGGTTCAAAAGGTAAGAGATGAACTCGAACAACTTCTTGATGACGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGGTGGGGACTTCACCTGTCAGCGACTCTGGCGCTCCAAATTGGTCTCTCGCCTCACCTACTATAACTATAGGCTCGAAGGTATCAAGAACAAGCAGGGCGAGTGCTGCAACAACAGTTGAAGAGGAGAATGATGTCGAGGAACTTGAGATGTTGCTCGAGGCTTACTTTATGCAAATTGAAGGCACGTTGAATAAATTGACAGCGCTGCGCGAATACATCGATGACACAGAGGATTACATTAATATCCAGCTTGACAATCATCGGAATCAGCTAATTCAGCTAGAGCTGTTCCTAAGTTCTGGAACTGTTTGTTTGTCTATGTGTTCTTTGGTGGCTGCAATATTTGGCATGAACATCCCGTATACATGGGCAAAAGATCATGGATACGTATTCAAATGGGTGATCATCGTCACGGGGATAGTTTGCGGCTCCGTTTTCTTGTTGATAATCTCGTACGCTCGGCACAAAGGTCTTGTTGGATCTTGA

Protein Analysis

407

Amino Acids

45.32

Weight (kDa)

4.74

Isoelectric Point (pI)

33.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 52 - 245 9.3e-29 Magnesium transporter MRS2-like
MRS2-like PF22099 285 - 333 2.3e-07 Magnesium transporter MRS2-like
CorA PF01544 292 - 394 1.1e-07 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 531
AccB1I GGYRCC 1 cut(s) 43
AccI GTMKAC 1 cut(s) 1097
AccII CGCG 1 cut(s) 945
AciI CCGC 3 cut(s) 84, 308, 1161
AclWI GGATC 2 cut(s) 215, 615
AcoI YGGCCR 1 cut(s) 406
AcsI RAATTY 2 cut(s) 467, 479
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 5 cut(s) 318, 348, 394, 438, 1190
AfeI AGCGCT 1 cut(s) 939
AfiI CCNNNNNNNGG 1 cut(s) 46
AgsI TTSAA 8 cut(s) 371, 403, 625, 659, 854, 914, 925, 1129
AjnI CCWGG 1 cut(s) 638
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 2 cut(s) 321, 783
AlwI GGATC 2 cut(s) 215, 615
Ama87I CYCGRG 3 cut(s) 21, 201, 890
Aor51HI AGCGCT 1 cut(s) 939
AoxI GGCC 2 cut(s) 18, 406
ApeKI GCWGC 5 cut(s) 31, 104, 839, 940, 1070
ApoI RAATTY 2 cut(s) 467, 479
AseI ATTAAT 1 cut(s) 975
Asp700I GAANNNNTTC 1 cut(s) 684
AspLEI GCGC 5 cut(s) 46, 532, 767, 940, 945
AspS9I GGNCC 3 cut(s) 19, 37, 130
AsuC2I CCSGG 3 cut(s) 22, 23, 41
AsuHPI GGTGA 3 cut(s) 738, 780, 1147
AsuII TTCGAA 1 cut(s) 477
AvaI CYCGRG 3 cut(s) 21, 201, 890
AvaII GGWCC 2 cut(s) 37, 130
BalI TGGCCA 1 cut(s) 408
BanI GGYRCC 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 429
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 5 cut(s) 18, 116, 826, 927, 1057
BccI CCATC 2 cut(s) 362, 727
BciT130I CCWGG 1 cut(s) 640
BciVI GTATCC 2 cut(s) 246, 1112
BclI TGATCA 1 cut(s) 1137
BcnI CCSGG 3 cut(s) 22, 23, 41
BcoDI GTCTC 2 cut(s) 321, 783
BfaI CTAG 4 cut(s) 503, 537, 545, 1016
BfmI CTRYAG 3 cut(s) 102, 514, 801
BfoI RGCGCY 3 cut(s) 47, 768, 941
BfuI GTATCC 2 cut(s) 246, 1112
BglII AGATCT 1 cut(s) 205
BisI GCNGC 7 cut(s) 32, 84, 105, 840, 941, 1071, 1162
BlsI GCNGC 7 cut(s) 33, 85, 106, 841, 942, 1072, 1163
Bme1390I CCNGG 4 cut(s) 22, 23, 41, 640
Bme18I GGWCC 2 cut(s) 37, 130
BmeT110I CYCGRG 3 cut(s) 21, 201, 890
BmgT120I GGNCC 3 cut(s) 19, 37, 130
BmiI GGNNCC 3 cut(s) 39, 45, 1165
BmrFI CCNGG 4 cut(s) 22, 23, 41, 640
BmsI GCATC 2 cut(s) 517, 544
BpiI GAAGAC 1 cut(s) 429
BplI GAGNNNNNCTC 4 cut(s) 566, 598, 660, 692
Bpu14I TTCGAA 1 cut(s) 477
BpuEI CTTGAG 2 cut(s) 57, 899
BpuMI CCSGG 3 cut(s) 22, 23, 41
Bsa29I ATCGAT 1 cut(s) 954
BsaAI YACGTR 1 cut(s) 1123
BsaBI GATNNNNATC 1 cut(s) 558
BsaHI GRCGYC 1 cut(s) 44
BsaI GGTCTC 2 cut(s) 321, 783
BsaJI CCNNGG 2 cut(s) 21, 409
Bsc4I CCNNNNNNNGG 1 cut(s) 46
Bse3DI GCAATG 1 cut(s) 639
Bse8I GATNNNNATC 1 cut(s) 558
BseBI CCWGG 1 cut(s) 640
BseCI ATCGAT 1 cut(s) 954
BseDI CCNNGG 2 cut(s) 21, 409
BseGI GGATG 3 cut(s) 31, 316, 1089
BseJI GATNNNNATC 1 cut(s) 558
BseLI CCNNNNNNNGG 1 cut(s) 46
BseMI GCAATG 1 cut(s) 639
BseMII CTCAG 1 cut(s) 74
BseRI GAGGAG 1 cut(s) 872
BseXI GCAGC 5 cut(s) 18, 116, 826, 927, 1057
Bsh1236I CGCG 1 cut(s) 945
BshFI GGCC 2 cut(s) 20, 408
BshNI GGYRCC 1 cut(s) 43
BshVI ATCGAT 1 cut(s) 954
BsiHKAI GWGCWC 1 cut(s) 288
BsiHKCI CYCGRG 3 cut(s) 21, 201, 890
BsiSI CCGG 4 cut(s) 22, 41, 47, 563
BsiWI CGTACG 1 cut(s) 1188
BslFI GGGAC 2 cut(s) 23, 754
BslI CCNNNNNNNGG 1 cut(s) 46
BsmAI GTCTC 2 cut(s) 321, 783
BsmFI GGGAC 2 cut(s) 23, 754
BsnI GGCC 2 cut(s) 20, 408
Bso31I GGTCTC 2 cut(s) 321, 783
BsoBI CYCGRG 3 cut(s) 21, 201, 890
Bsp119I TTCGAA 1 cut(s) 477
Bsp1286I GDGCHC 1 cut(s) 288
Bsp143I GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
BspACI CCGC 3 cut(s) 84, 308, 1161
BspANI GGCC 2 cut(s) 20, 408
BspCNI CTCAG 1 cut(s) 73
BspDI ATCGAT 1 cut(s) 954
BspFNI CGCG 1 cut(s) 945
BspLI GGNNCC 3 cut(s) 39, 45, 1165
BspMAI CTGCAG 1 cut(s) 106
BspPI GGATC 2 cut(s) 215, 615
BspT104I TTCGAA 1 cut(s) 477
BspT107I GGYRCC 1 cut(s) 43
BspTNI GGTCTC 2 cut(s) 321, 783
BsrDI GCAATG 1 cut(s) 639
BssECI CCNNGG 2 cut(s) 21, 409
BssMI GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
BssNAI GTATAC 1 cut(s) 1098
BssNI GRCGYC 1 cut(s) 44
BssT1I CCWWGG 1 cut(s) 409
Bst1107I GTATAC 1 cut(s) 1098
Bst2UI CCWGG 1 cut(s) 640
Bst4CI ACNGT 4 cut(s) 151, 346, 850, 1042
Bst6I CTCTTC 2 cut(s) 620, 849
BstACI GRCGYC 1 cut(s) 44
BstBAI YACGTR 1 cut(s) 1123
BstBI TTCGAA 1 cut(s) 477
BstC8I GCNNGC 3 cut(s) 69, 88, 171
BstDEI CTNAG 3 cut(s) 60, 323, 1028
BstF5I GGATG 3 cut(s) 31, 316, 1089
BstFNI CGCG 1 cut(s) 945
BstH2I RGCGCY 3 cut(s) 47, 768, 941
BstHHI GCGC 5 cut(s) 46, 532, 767, 940, 945
BstKTI GATC 6 cut(s) 208, 223, 610, 1114, 1140, 1217
BstMAI GTCTC 2 cut(s) 321, 783
BstMBI GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
BstMWI GCNNNNNNNGC 6 cut(s) 83, 373, 563, 762, 839, 1012
BstNI CCWGG 1 cut(s) 640
BstSCI CCNGG 4 cut(s) 20, 21, 39, 638
BstSFI CTRYAG 3 cut(s) 102, 514, 801
BstSNI TACGTA 1 cut(s) 1123
BstUI CGCG 1 cut(s) 945
BstV1I GCAGC 5 cut(s) 18, 116, 826, 927, 1057
BstV2I GAAGAC 1 cut(s) 429
BstX2I RGATCY 2 cut(s) 205, 1214
BstYI RGATCY 2 cut(s) 205, 1214
BstZ17I GTATAC 1 cut(s) 1098
Bsu15I ATCGAT 1 cut(s) 954
BsuI GTATCC 2 cut(s) 246, 1112
BsuRI GGCC 2 cut(s) 20, 408
BsuTUI ATCGAT 1 cut(s) 954
BtsCI GGATG 3 cut(s) 31, 316, 1089
BtsI GCAGTG 1 cut(s) 54
BtsIMutI CAGTG 1 cut(s) 54
Cac8I GCNNGC 3 cut(s) 69, 88, 171
CfoI GCGC 5 cut(s) 46, 532, 767, 940, 945
Cfr13I GGNCC 3 cut(s) 19, 37, 130
Cfr9I CCCGGG 1 cut(s) 21
ClaI ATCGAT 1 cut(s) 954
CseI GACGC 2 cut(s) 73, 434
CsiI ACCWGGT 1 cut(s) 638
Csp6I GTAC 5 cut(s) 317, 347, 393, 437, 1189
CviAII CATG 4 cut(s) 134, 1084, 1101, 1115
CviQI GTAC 5 cut(s) 317, 347, 393, 437, 1189
DdeI CTNAG 3 cut(s) 60, 323, 1028
DinI GGCGCC 1 cut(s) 45
DpnI GATC 6 cut(s) 207, 222, 609, 1113, 1139, 1216
DpnII GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
EaeI YGGCCR 1 cut(s) 406
Eam1104I CTCTTC 2 cut(s) 620, 849
EarI CTCTTC 2 cut(s) 620, 849
Eco105I TACGTA 1 cut(s) 1123
Eco130I CCWWGG 1 cut(s) 409
Eco31I GGTCTC 2 cut(s) 321, 783
Eco47I GGWCC 2 cut(s) 37, 130
Eco47III AGCGCT 1 cut(s) 939
Eco88I CYCGRG 3 cut(s) 21, 201, 890
EcoRI GAATTC 2 cut(s) 467, 479
EcoRII CCWGG 1 cut(s) 638
EcoT14I CCWWGG 1 cut(s) 409
EgeI GGCGCC 1 cut(s) 45
EheI GGCGCC 1 cut(s) 45
ErhI CCWWGG 1 cut(s) 409
FaeI CATG 4 cut(s) 137, 1087, 1104, 1118
FaqI GGGAC 2 cut(s) 23, 754
FatI CATG 4 cut(s) 133, 1083, 1100, 1114
FbaI TGATCA 1 cut(s) 1137
FblI GTMKAC 1 cut(s) 1097
Fnu4HI GCNGC 7 cut(s) 32, 84, 105, 840, 941, 1071, 1162
FokI GGATG 3 cut(s) 38, 323, 1076
Fsp4HI GCNGC 7 cut(s) 32, 84, 105, 840, 941, 1071, 1162
FspBI CTAG 4 cut(s) 503, 537, 545, 1016
FspI TGCGCA 1 cut(s) 531
GlaI GCGC 5 cut(s) 45, 531, 766, 939, 944
GluI GCNGC 7 cut(s) 32, 84, 105, 840, 941, 1071, 1162
HaeII RGCGCY 3 cut(s) 47, 768, 941
HaeIII GGCC 2 cut(s) 20, 408
HapII CCGG 4 cut(s) 22, 41, 47, 563
HgaI GACGC 2 cut(s) 73, 434
HhaI GCGC 5 cut(s) 46, 532, 767, 940, 945
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 4 cut(s) 137, 1087, 1104, 1118
Hin6I GCGC 5 cut(s) 44, 530, 765, 938, 943
HinP1I GCGC 5 cut(s) 44, 530, 765, 938, 943
HincII GTYRAC 1 cut(s) 645
HindII GTYRAC 1 cut(s) 645
HinfI GANTC 3 cut(s) 193, 758, 1000
HpaII CCGG 4 cut(s) 22, 41, 47, 563
HphI GGTGA 3 cut(s) 738, 780, 1147
Hpy166II GTNNAC 2 cut(s) 645, 1098
Hpy188I TCNGA 5 cut(s) 63, 192, 485, 618, 999
Hpy8I GTNNAC 2 cut(s) 645, 1098
HpyAV CCTTC 4 cut(s) 249, 500, 805, 908
HpyCH4III ACNGT 4 cut(s) 151, 346, 850, 1042
HpyCH4IV ACGT 2 cut(s) 920, 1122
HpyCH4V TGCA 6 cut(s) 104, 500, 632, 842, 907, 1073
HpyF10VI GCNNNNNNNGC 6 cut(s) 83, 373, 563, 762, 839, 1012
HpyF3I CTNAG 3 cut(s) 60, 323, 1028
HpySE526I ACGT 2 cut(s) 920, 1122
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 4 cut(s) 137, 1087, 1104, 1118
HspAI GCGC 5 cut(s) 44, 530, 765, 938, 943
KasI GGCGCC 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 1137
Kzo9I GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
LmnI GCTCC 4 cut(s) 283, 364, 772, 1169
Lsp1109I GCAGC 5 cut(s) 18, 116, 826, 927, 1057
LweI GCATC 2 cut(s) 517, 544
MabI ACCWGGT 1 cut(s) 638
MaeI CTAG 4 cut(s) 503, 537, 545, 1016
MaeII ACGT 2 cut(s) 920, 1122
MaeIII GTNAC 1 cut(s) 1144
MalI GATC 6 cut(s) 207, 222, 609, 1113, 1139, 1216
MboI GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
MboII GAAGA 6 cut(s) 200, 428, 431, 434, 637, 866
MflI RGATCY 2 cut(s) 205, 1214
MhlI GDGCHC 1 cut(s) 288
MlsI TGGCCA 1 cut(s) 408
MluCI AATT 9 cut(s) 277, 397, 467, 479, 601, 772, 909, 929, 1008
MluNI TGGCCA 1 cut(s) 408
Mly113I GGCGCC 1 cut(s) 44
MlyI GAGTC 1 cut(s) 752
MmeI TCCRAC 1 cut(s) 1192
Mox20I TGGCCA 1 cut(s) 408
MroXI GAANNNNTTC 1 cut(s) 684
MscI TGGCCA 1 cut(s) 408
MseI TTAA 3 cut(s) 276, 360, 975
Msp20I TGGCCA 1 cut(s) 408
MspA1I CMGCKG 1 cut(s) 308
MspI CCGG 4 cut(s) 22, 41, 47, 563
MspR9I CCNGG 4 cut(s) 22, 23, 41, 640
MteI GCGCNGCGC 1 cut(s) 941
MvaI CCWGG 1 cut(s) 640
MvnI CGCG 1 cut(s) 945
MwoI GCNNNNNNNGC 6 cut(s) 83, 373, 563, 762, 839, 1012
NarI GGCGCC 1 cut(s) 44
NciI CCSGG 3 cut(s) 22, 23, 41
NdeII GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
NlaIII CATG 4 cut(s) 137, 1087, 1104, 1118
NlaIV GGNNCC 3 cut(s) 39, 45, 1165
NmeAIII GCCGAG 1 cut(s) 1174
NmuCI GTSAC 1 cut(s) 1144
NsbI TGCGCA 1 cut(s) 531
NspV TTCGAA 1 cut(s) 477
PaeR7I CTCGAG 2 cut(s) 201, 890
PdmI GAANNNNTTC 1 cut(s) 684
PfeI GAWTC 2 cut(s) 193, 1000
Pfl23II CGTACG 1 cut(s) 1188
PkrI GCNGC 7 cut(s) 33, 85, 106, 841, 942, 1072, 1163
PleI GAGTC 1 cut(s) 752
PluTI GGCGCC 1 cut(s) 47
PpsI GAGTC 1 cut(s) 752
Ppu21I YACGTR 1 cut(s) 1123
PshBI ATTAAT 1 cut(s) 975
Psp6I CCWGG 1 cut(s) 638
PspGI CCWGG 1 cut(s) 638
PspLI CGTACG 1 cut(s) 1188
PspN4I GGNNCC 3 cut(s) 39, 45, 1165
PspPI GGNCC 3 cut(s) 19, 37, 130
PspXI VCTCGAGB 1 cut(s) 890
PstI CTGCAG 1 cut(s) 106
PsuI RGATCY 2 cut(s) 205, 1214
RsaI GTAC 5 cut(s) 318, 348, 394, 438, 1190
RsaNI GTAC 5 cut(s) 317, 347, 393, 437, 1189
SaqAI TTAA 3 cut(s) 276, 360, 975
SatI GCNGC 7 cut(s) 32, 84, 105, 840, 941, 1071, 1162
Sau3AI GATC 6 cut(s) 205, 220, 607, 1111, 1137, 1214
Sau96I GGNCC 3 cut(s) 19, 37, 130
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 4 cut(s) 22, 23, 41, 640
SduI GDGCHC 1 cut(s) 288
SexAI ACCWGGT 1 cut(s) 638
SfaNI GCATC 2 cut(s) 517, 544
SfcI CTRYAG 3 cut(s) 102, 514, 801
SfoI GGCGCC 1 cut(s) 45
Sfr274I CTCGAG 2 cut(s) 201, 890
SfuI TTCGAA 1 cut(s) 477
SinI GGWCC 2 cut(s) 37, 130
SlaI CTCGAG 2 cut(s) 201, 890
SmaI CCCGGG 1 cut(s) 23
SmlI CTYRAG 4 cut(s) 72, 201, 878, 890
SmoI CTYRAG 4 cut(s) 72, 201, 878, 890
SnaBI TACGTA 1 cut(s) 1123
Sse9I AATT 9 cut(s) 277, 397, 467, 479, 601, 772, 909, 929, 1008
SsiI CCGC 3 cut(s) 84, 308, 1161
SspDI GGCGCC 1 cut(s) 43
SspI AATATT 1 cut(s) 1077
SspMI CTAG 4 cut(s) 503, 537, 545, 1016
StyD4I CCNGG 4 cut(s) 20, 21, 39, 638
StyI CCWWGG 1 cut(s) 409
TaaI ACNGT 4 cut(s) 151, 346, 850, 1042
TaiI ACGT 2 cut(s) 923, 1125
TaqI TCGA 8 cut(s) 202, 219, 477, 678, 809, 870, 891, 954
TasI AATT 9 cut(s) 277, 397, 467, 479, 601, 772, 909, 929, 1008
TatI WGTACW 1 cut(s) 346
TauI GCSGC 2 cut(s) 86, 1164
TfiI GAWTC 2 cut(s) 193, 1000
Tru1I TTAA 3 cut(s) 276, 360, 975
Tru9I TTAA 3 cut(s) 276, 360, 975
TscAI CASTG 1 cut(s) 61
TseFI GTSAC 1 cut(s) 1144
TseI GCWGC 5 cut(s) 31, 104, 839, 940, 1070
Tsp45I GTSAC 1 cut(s) 1144
TspDTI ATGAA 4 cut(s) 462, 480, 687, 1100
TspGWI ACGGA 1 cut(s) 1156
TspMI CCCGGG 1 cut(s) 21
TspRI CASTG 1 cut(s) 61
VpaK11BI GGWCC 2 cut(s) 37, 130
VspI ATTAAT 1 cut(s) 975
XapI RAATTY 2 cut(s) 467, 479
XbaI TCTAGA 1 cut(s) 544
XhoI CTCGAG 2 cut(s) 201, 890
XmaI CCCGGG 1 cut(s) 21
XmiI GTMKAC 1 cut(s) 1097
XmnI GAANNNNTTC 1 cut(s) 684
XspI CTAG 4 cut(s) 503, 537, 545, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.