MD13G1205200.v1.1

magnesium transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
18585106 .. 18591212
6107 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1205200.v1.1.491

Sequence Viewer

Length: 1179 bp
ATGGCTCCAGACGGGGAATTGGTGCCGGTGGACCCACAGGCGGTTGTGGCGGTGAAGAAGAAGTCCTCTCGGAGTTGGGTTTTGTTGGACTGCACCGGAAAAGCTACCGTCTTGGACGTGGACAAGTATGGCATCATGCAGAGAGTTCACATTCACGCTCGCGATCTTCGCATTGTCGACCCTTTGCTCTCTTACCCTTCCGCCATTCTCGGCCGTGACCGAGCCATAGTTCTCAATTTGGAGCATATTAAAGCAATAATCACTGCTGAAGAGGTGCTGCTCCGGGATCCATTGGATGAAAACGTTATTCCTGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTAAATGTCGCACGTGAAAATCAAACAAATGGGAAAGAGTTCCCTGCTGTGCAAAATGATATTGAGGCGGGTGAAGAAGATGAGTCACCATTTGAGTTCCGGGCCTTGGAGGTAGCCTTGGAAGCAATTTGTAGCTTTCTTGCTGCACGTACGACAGAACTTGAGACTGCTGCTTATCCTGCTTTAGATGAGCTTACTGCTAAGATTAGTAGCCGCAATTTGGATAGGGTTCGTAAATTGAAGAGTGGAATGACTAGGTTGACTGCTCGGGTACAAAAGGTCAGGGATGAGCTTGAACAGCTGCTGGATGATGATGATGATATGGCTGACCTTTACTTGTCCAGAAAGTTGGCTGGTGCATCTTCGCCAGTTAGTGACACTGGTCCTTCCAATTGGTATCCTGCCTCCCCTACCATAGGCTCAAAAATATCGCGGGCAAGTAGAGCAAGTATCGTCACCGTTCGTGGAGATGAGAATGACGTTGAGGAACTTGAAATGTTACTTGAGGCTTATTTTATGCAGATTGATGGCACCTTGAACAAATTAGCCACGCTACGTGAATATATTGATGATACAGAGGATTACATTAATATTCAGCTTGACAACCACAGGAATCAGCTGATTCAGCTTGAGCTTTTTCTTAGTTCCGGGACTGTATGCACCTCCATATTTGCATTGGTGACTGGAATTTTCGGCATGAATATCCCGTATACATGGAATGAGGGTTACGGATACATGTTCAAATGGGTTTGCATTGTCACGGGAATTTGCTGTCTTTTTGGTTTCGTAATAATCATATCATATGCTCGTCACAAGGGTCTAGTCGGATCTTGA

Protein Analysis

393

Amino Acids

43.72

Weight (kDa)

4.82

Isoelectric Point (pI)

36.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 35 - 233 1.7e-26 Magnesium transporter MRS2-like
MRS2-like PF22099 272 - 319 7.2e-08 Magnesium transporter MRS2-like
CorA PF01544 280 - 377 7.6e-08 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 22, 875
AccI GTMKAC 2 cut(s) 177, 1055
AccII CGCG 2 cut(s) 162, 778
AciI CCGC 6 cut(s) 41, 50, 201, 413, 559, 778
AclI AACGTT 1 cut(s) 303
AclWI GGATC 2 cut(s) 281, 294
AcoI YGGCCR 1 cut(s) 211
AcsI RAATTY 2 cut(s) 1032, 1110
AcuI CTGAAG 1 cut(s) 288
AcvI CACGTG 1 cut(s) 359
AfaI GTAC 2 cut(s) 496, 618
AfiI CCNNNNNNNGG 4 cut(s) 40, 451, 565, 761
AflIII ACRYGT 1 cut(s) 1080
AgsI TTSAA 7 cut(s) 320, 329, 586, 641, 839, 883, 1087
AjiI CACGTC 1 cut(s) 118
Alw26I GTCTC 1 cut(s) 503
AlwI GGATC 2 cut(s) 281, 294
AlwNI CAGNNNCTG 1 cut(s) 649
Ama87I CYCGRG 1 cut(s) 612
AoxI GGCC 2 cut(s) 211, 447
ApeKI GCWGC 4 cut(s) 277, 488, 515, 646
ApoI RAATTY 2 cut(s) 1032, 1110
AseI ATTAAT 1 cut(s) 933
Asp700I GAANNNNTTC 2 cut(s) 324, 383
AspS9I GGNCC 3 cut(s) 31, 447, 728
AsuC2I CCSGG 3 cut(s) 284, 446, 994
AsuHPI GGTGA 5 cut(s) 64, 423, 428, 793, 1036
AvaI CYCGRG 1 cut(s) 612
AvaII GGWCC 2 cut(s) 31, 728
BamHI GGATCC 1 cut(s) 286
BanI GGYRCC 2 cut(s) 22, 875
BbrPI CACGTG 1 cut(s) 359
BbvI GCAGC 4 cut(s) 264, 475, 502, 633
BccI CCATC 1 cut(s) 866
BceAI ACGGC 1 cut(s) 198
BciVI GTATCC 2 cut(s) 753, 1070
BcnI CCSGG 3 cut(s) 284, 446, 994
BcoDI GTCTC 1 cut(s) 503
BfaI CTAG 2 cut(s) 600, 1166
BfuI GTATCC 2 cut(s) 753, 1070
BisI GCNGC 5 cut(s) 278, 489, 516, 559, 647
BlsI GCNGC 5 cut(s) 279, 490, 517, 560, 648
Bme1390I CCNGG 3 cut(s) 284, 446, 994
Bme18I GGWCC 2 cut(s) 31, 728
BmeT110I CYCGRG 1 cut(s) 612
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 3 cut(s) 31, 447, 728
BmiI GGNNCC 5 cut(s) 6, 24, 33, 288, 877
BmrFI CCNGG 3 cut(s) 284, 446, 994
BmsI GCATC 2 cut(s) 141, 713
BoxI GACNNNNGTC 1 cut(s) 726
BpuEI CTTGAG 3 cut(s) 527, 869, 995
BpuMI CCSGG 3 cut(s) 284, 446, 994
BsaAI YACGTR 3 cut(s) 359, 494, 902
BsaJI CCNNGG 2 cut(s) 450, 462
BsaWI WCCGGW 1 cut(s) 95
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 451, 565, 761
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 3 cut(s) 713, 730, 1033
BseDI CCNNGG 2 cut(s) 450, 462
BseGI GGATG 3 cut(s) 301, 637, 658
BseLI CCNNNNNNNGG 4 cut(s) 40, 451, 565, 761
BseNI ACTGG 3 cut(s) 713, 730, 1033
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 4 cut(s) 264, 475, 502, 633
BsgI GTGCAG 2 cut(s) 76, 474
Bsh1236I CGCG 2 cut(s) 162, 778
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 2 cut(s) 213, 449
BshNI GGYRCC 2 cut(s) 22, 875
BsiEI CGRYCG 1 cut(s) 214
BsiHKCI CYCGRG 1 cut(s) 612
BsiSI CCGG 5 cut(s) 26, 96, 283, 445, 993
BsiWI CGTACG 1 cut(s) 494
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 4 cut(s) 40, 451, 565, 761
BsmAI GTCTC 1 cut(s) 503
BsmFI GGGAC 1 cut(s) 1009
BsnI GGCC 2 cut(s) 213, 449
BsoBI CYCGRG 1 cut(s) 612
Bsp143I GATC 3 cut(s) 163, 286, 1172
Bsp68I TCGCGA 1 cut(s) 162
BspACI CCGC 6 cut(s) 41, 50, 201, 413, 559, 778
BspANI GGCC 2 cut(s) 213, 449
BspFNI CGCG 2 cut(s) 162, 778
BspLI GGNNCC 5 cut(s) 6, 24, 33, 288, 877
BspPI GGATC 2 cut(s) 281, 294
BspQI GCTCTTC 1 cut(s) 315
BspT107I GGYRCC 2 cut(s) 22, 875
BsrFI RCCGGY 1 cut(s) 25
BsrI ACTGG 3 cut(s) 713, 730, 1033
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 2 cut(s) 450, 462
BssMI GATC 3 cut(s) 163, 286, 1172
BssNAI GTATAC 1 cut(s) 1056
BssT1I CCWWGG 2 cut(s) 450, 462
Bst1107I GTATAC 1 cut(s) 1056
Bst4CI ACNGT 4 cut(s) 109, 336, 805, 1000
Bst6I CTCTTC 3 cut(s) 264, 315, 581
BstBAI YACGTR 3 cut(s) 359, 494, 902
BstC8I GCNNGC 2 cut(s) 160, 780
BstDEI CTNAG 2 cut(s) 546, 986
BstENI CCTNNNNNAGG 1 cut(s) 759
BstF5I GGATG 3 cut(s) 301, 637, 658
BstFNI CGCG 2 cut(s) 162, 778
BstKTI GATC 3 cut(s) 166, 289, 1175
BstMAI GTCTC 1 cut(s) 503
BstMBI GATC 3 cut(s) 163, 286, 1172
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 7 cut(s) 47, 168, 467, 524, 643, 788, 970
BstNSI RCATGY 1 cut(s) 1084
BstPAI GACNNNNGTC 1 cut(s) 726
BstSCI CCNGG 3 cut(s) 282, 444, 992
BstUI CGCG 2 cut(s) 162, 778
BstV1I GCAGC 4 cut(s) 264, 475, 502, 633
BstX2I RGATCY 2 cut(s) 286, 1172
BstXI CCANNNNNNTGG 1 cut(s) 694
BstYI RGATCY 2 cut(s) 286, 1172
BstZ17I GTATAC 1 cut(s) 1056
BstZI CGGCCG 1 cut(s) 211
BsuI GTATCC 2 cut(s) 753, 1070
BsuRI GGCC 2 cut(s) 213, 449
BtrI CACGTC 1 cut(s) 118
BtsCI GGATG 3 cut(s) 301, 637, 658
BtsI GCAGTG 1 cut(s) 261
BtsIMutI CAGTG 2 cut(s) 261, 723
BtuMI TCGCGA 1 cut(s) 162
Cac8I GCNNGC 2 cut(s) 160, 780
CaiI CAGNNNCTG 1 cut(s) 649
Cfr10I RCCGGY 1 cut(s) 25
Cfr13I GGNCC 3 cut(s) 31, 447, 728
Csp6I GTAC 2 cut(s) 495, 617
CviAII CATG 4 cut(s) 136, 1042, 1059, 1081
CviQI GTAC 2 cut(s) 495, 617
DdeI CTNAG 2 cut(s) 546, 986
DpnI GATC 3 cut(s) 165, 288, 1174
DpnII GATC 3 cut(s) 163, 286, 1172
EaeI YGGCCR 1 cut(s) 211
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 3 cut(s) 264, 315, 581
EarI CTCTTC 3 cut(s) 264, 315, 581
EciI GGCGGA 1 cut(s) 190
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 2 cut(s) 450, 462
Eco47I GGWCC 2 cut(s) 31, 728
Eco52I CGGCCG 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 288
Eco72I CACGTG 1 cut(s) 359
Eco88I CYCGRG 1 cut(s) 612
EcoNI CCTNNNNNAGG 1 cut(s) 759
EcoT14I CCWWGG 2 cut(s) 450, 462
ErhI CCWWGG 2 cut(s) 450, 462
FaeI CATG 4 cut(s) 139, 1045, 1062, 1084
FaqI GGGAC 1 cut(s) 1009
FatI CATG 4 cut(s) 135, 1041, 1058, 1080
FauI CCCGC 2 cut(s) 406, 771
FauNDI CATATG 1 cut(s) 1147
FblI GTMKAC 2 cut(s) 177, 1055
Fnu4HI GCNGC 5 cut(s) 278, 489, 516, 559, 647
FokI GGATG 3 cut(s) 308, 644, 665
Fsp4HI GCNGC 5 cut(s) 278, 489, 516, 559, 647
FspBI CTAG 2 cut(s) 600, 1166
GluI GCNGC 5 cut(s) 278, 489, 516, 559, 647
HaeIII GGCC 2 cut(s) 213, 449
HapII CCGG 5 cut(s) 26, 96, 283, 445, 993
Hin1II CATG 4 cut(s) 139, 1045, 1062, 1084
HincII GTYRAC 2 cut(s) 178, 606
HindII GTYRAC 2 cut(s) 178, 606
HinfI GANTC 3 cut(s) 428, 958, 967
HpaII CCGG 5 cut(s) 26, 96, 283, 445, 993
HphI GGTGA 5 cut(s) 64, 423, 428, 793, 1036
Hpy166II GTNNAC 6 cut(s) 31, 121, 148, 178, 606, 1056
Hpy188I TCNGA 2 cut(s) 72, 1172
Hpy188III TCNNGA 4 cut(s) 8, 161, 687, 1176
Hpy8I GTNNAC 6 cut(s) 31, 121, 148, 178, 606, 1056
HpyAV CCTTC 2 cut(s) 207, 741
HpyCH4III ACNGT 4 cut(s) 109, 336, 805, 1000
HpyCH4IV ACGT 6 cut(s) 117, 303, 358, 493, 825, 901
HpyCH4V TGCA 9 cut(s) 93, 139, 397, 491, 704, 865, 1005, 1019, 1098
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 168, 467, 524, 643, 788, 970
HpyF3I CTNAG 2 cut(s) 546, 986
HpySE526I ACGT 6 cut(s) 117, 303, 358, 493, 825, 901
Hsp92II CATG 4 cut(s) 139, 1045, 1062, 1084
Kzo9I GATC 3 cut(s) 163, 286, 1172
LguI GCTCTTC 1 cut(s) 315
LmnI GCTCC 3 cut(s) 10, 241, 285
Lsp1109I GCAGC 4 cut(s) 264, 475, 502, 633
LweI GCATC 2 cut(s) 141, 713
MaeI CTAG 2 cut(s) 600, 1166
MaeII ACGT 6 cut(s) 117, 303, 358, 493, 825, 901
MaeIII GTNAC 9 cut(s) 215, 429, 719, 799, 843, 1024, 1070, 1102, 1154
MalI GATC 3 cut(s) 165, 288, 1174
MboI GATC 3 cut(s) 163, 286, 1172
MboII GAAGA 9 cut(s) 67, 70, 158, 281, 332, 431, 434, 598, 699
MfeI CAATTG 1 cut(s) 736
MflI RGATCY 2 cut(s) 286, 1172
MluCI AATT 9 cut(s) 17, 235, 471, 562, 581, 736, 887, 1032, 1110
MlyI GAGTC 1 cut(s) 437
MmeI TCCRAC 2 cut(s) 66, 1150
MroXI GAANNNNTTC 2 cut(s) 324, 383
MseI TTAA 2 cut(s) 249, 933
MspA1I CMGCKG 2 cut(s) 646, 964
MspI CCGG 5 cut(s) 26, 96, 283, 445, 993
MspR9I CCNGG 3 cut(s) 284, 446, 994
MunI CAATTG 1 cut(s) 736
MvnI CGCG 2 cut(s) 162, 778
MwoI GCNNNNNNNGC 7 cut(s) 47, 168, 467, 524, 643, 788, 970
NciI CCSGG 3 cut(s) 284, 446, 994
NdeI CATATG 1 cut(s) 1147
NdeII GATC 3 cut(s) 163, 286, 1172
NlaIII CATG 4 cut(s) 139, 1045, 1062, 1084
NlaIV GGNNCC 5 cut(s) 6, 24, 33, 288, 877
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 7 cut(s) 215, 429, 719, 799, 1024, 1102, 1154
NruI TCGCGA 1 cut(s) 162
NspI RCATGY 1 cut(s) 1084
PciI ACATGT 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 315
PdmI GAANNNNTTC 2 cut(s) 324, 383
PfeI GAWTC 2 cut(s) 958, 967
Pfl23II CGTACG 1 cut(s) 494
PfoI TCCNGGA 2 cut(s) 282, 992
PkrI GCNGC 5 cut(s) 279, 490, 517, 560, 648
PleI GAGTC 1 cut(s) 436
PmaCI CACGTG 1 cut(s) 359
PmlI CACGTG 1 cut(s) 359
PpsI GAGTC 1 cut(s) 436
Ppu21I YACGTR 3 cut(s) 359, 494, 902
PscI ACATGT 1 cut(s) 1080
PshAI GACNNNNGTC 1 cut(s) 726
PshBI ATTAAT 1 cut(s) 933
Psp1406I AACGTT 1 cut(s) 303
PspCI CACGTG 1 cut(s) 359
PspLI CGTACG 1 cut(s) 494
PspN4I GGNNCC 5 cut(s) 6, 24, 33, 288, 877
PspPI GGNCC 3 cut(s) 31, 447, 728
PstNI CAGNNNCTG 1 cut(s) 649
PsuI RGATCY 2 cut(s) 286, 1172
PvuII CAGCTG 2 cut(s) 646, 964
RruI TCGCGA 1 cut(s) 162
RsaI GTAC 2 cut(s) 496, 618
RsaNI GTAC 2 cut(s) 495, 617
SalI GTCGAC 1 cut(s) 176
SapI GCTCTTC 1 cut(s) 315
SaqAI TTAA 2 cut(s) 249, 933
SatI GCNGC 5 cut(s) 278, 489, 516, 559, 647
Sau3AI GATC 3 cut(s) 163, 286, 1172
Sau96I GGNCC 3 cut(s) 31, 447, 728
SchI GAGTC 1 cut(s) 437
ScrFI CCNGG 3 cut(s) 284, 446, 994
SfaNI GCATC 2 cut(s) 141, 713
SinI GGWCC 2 cut(s) 31, 728
SmlI CTYRAG 3 cut(s) 506, 848, 974
SmoI CTYRAG 3 cut(s) 506, 848, 974
Sse9I AATT 9 cut(s) 17, 235, 471, 562, 581, 736, 887, 1032, 1110
SsiI CCGC 6 cut(s) 41, 50, 201, 413, 559, 778
SspI AATATT 1 cut(s) 937
SspMI CTAG 2 cut(s) 600, 1166
StyD4I CCNGG 3 cut(s) 282, 444, 992
StyI CCWWGG 2 cut(s) 450, 462
TaaI ACNGT 4 cut(s) 109, 336, 805, 1000
TaiI ACGT 6 cut(s) 120, 306, 361, 496, 828, 904
TaqI TCGA 1 cut(s) 177
TaqII GACCGA 1 cut(s) 234
TasI AATT 9 cut(s) 17, 235, 471, 562, 581, 736, 887, 1032, 1110
TauI GCSGC 1 cut(s) 561
TfiI GAWTC 2 cut(s) 958, 967
Tru1I TTAA 2 cut(s) 249, 933
Tru9I TTAA 2 cut(s) 249, 933
TscAI CASTG 2 cut(s) 268, 730
TseFI GTSAC 7 cut(s) 215, 429, 719, 799, 1024, 1102, 1154
TseI GCWGC 4 cut(s) 277, 488, 515, 646
Tsp45I GTSAC 7 cut(s) 215, 429, 719, 799, 1024, 1102, 1154
TspDTI ATGAA 2 cut(s) 312, 1058
TspGWI ACGGA 1 cut(s) 1089
TspRI CASTG 2 cut(s) 268, 730
VpaK11BI GGWCC 2 cut(s) 31, 728
VspI ATTAAT 1 cut(s) 933
XagI CCTNNNNNAGG 1 cut(s) 759
XapI RAATTY 2 cut(s) 1032, 1110
XceI RCATGY 1 cut(s) 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 1018
XmiI GTMKAC 2 cut(s) 177, 1055
XmnI GAANNNNTTC 2 cut(s) 324, 383
XspI CTAG 2 cut(s) 600, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.