MD16G1207000.v1.1

magnesium transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
19258480 .. 19263507
5028 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1207000.v1.1.491

Sequence Viewer

Length: 1182 bp
ATGGCTCGAGAGGGGGAAATGGTGCCGGTGGACCCACATTTGGCGGTGGTGGCGGTGAAGAAGAAGTCCTCTCGGAGTTGGGTTTTATTGGACTGTAATGGAAAAGCTACAGTCTTGGACGTGGACAAGTATGCCATCATGCACAGAGTTCACATTCACGCTCGCGATCTTCGCATTGTCGACCCTTTGCTCTCTTACCCTTCCACCATTCTCGGCCGTGACATGGCCATAGTTCTCAATTTGGAGCATATTAAAGCAATAATCACTGCCGAAGAGGTGCTGCTTCGGGATCCCTTGGATGAAAACGTTATTCCGGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTTAATGCCACATGTGAAAGTCAAACAGACGGGAAAGAGTTCCCTGCTGGGCAAAATGATACTGAGGCGGGTGATGAAGATGAGTCTCCATTTGAGTTCCGGGCCTTGGAGGTAGCTTTGGAAGCAATTTGTAGTTTTCTTGCTGTACGTACGACAGAACTTGAGACTGCTGCTTATCCTGCTTTAGATGAACTTACGTCTAAGATTAGCAGCCGCAATTTGGATAGGGTTCGTAAATTGAAGAGTGGAATGACGAGGTTGACTGCTCGGGTACAAAAGGTGAGGGATGAGCTTGAACAGCTGCTGGACGATGACGATGATATGGCTGACCTTTACTTATCAAGAAAGCTGGCTGGTGCATCTTCACCAGTTAGTGACTCTGGTCCTGCCAATTGGTATCCTGCCTCCCCTACCCTAGGCTCAAAAATATCACGTGCAAGTAGAGCAACTATGATCACTGTTCGTGGAGATGAGAATGACGTTGAGGAACTTGAAATGTTACTTGAGGCTTATTTTATGCAGATTGATGGCACCTTGAACAAATTAGCAACGCTGCGTGAATATATTGATGATACAGAGGATTACATTAATATACAGCTCGATAACCACAGGAATCAGCTGATTCAGCTTGAGCTTTTTCTTAGTTCCGGGACTGTATGCGTCTCCATGTTTTCATTGGTGGCTGGAATTTTTGGCATGAATATTCCATATACGTGGAATGACGGTTACGGATACATGTTCAAATGGGTTTGCGTTGTCACGGGAATTTTCTGTGCTGTTGTTTTCGTAATAGTCATATCATATGCTCGCTCCAAGGGTCTGGTCGGATCTTGA

Protein Analysis

394

Amino Acids

43.8

Weight (kDa)

4.77

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 31 - 234 1.1e-26 Magnesium transporter MRS2-like
MRS2-like PF22099 273 - 320 6.5e-08 Magnesium transporter MRS2-like
CorA PF01544 281 - 381 4.9e-09 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 22, 878
AccI GTMKAC 1 cut(s) 180
AccII CGCG 1 cut(s) 165
AciI CCGC 4 cut(s) 44, 53, 416, 562
AclI AACGTT 1 cut(s) 306
AclWI GGATC 2 cut(s) 284, 297
AcoI YGGCCR 2 cut(s) 214, 225
AcsI RAATTY 2 cut(s) 1035, 1113
AcvI CACGTG 1 cut(s) 782
AfaI GTAC 3 cut(s) 495, 499, 621
AfiI CCNNNNNNNGG 5 cut(s) 40, 223, 454, 568, 764
AflIII ACRYGT 2 cut(s) 359, 1083
AgsI TTSAA 7 cut(s) 323, 332, 589, 644, 842, 886, 1090
AjiI CACGTC 1 cut(s) 121
Alw26I GTCTC 3 cut(s) 438, 506, 1015
AlwI GGATC 2 cut(s) 284, 297
AlwNI CAGNNNCTG 1 cut(s) 652
Ama87I CYCGRG 2 cut(s) 6, 615
AoxI GGCC 3 cut(s) 214, 225, 450
ApeKI GCWGC 5 cut(s) 280, 518, 558, 649, 901
ApoI RAATTY 2 cut(s) 1035, 1113
AseI ATTAAT 1 cut(s) 936
Asp700I GAANNNNTTC 2 cut(s) 327, 386
AspA2I CCTAGG 1 cut(s) 763
AspS9I GGNCC 3 cut(s) 31, 450, 731
AsuC2I CCSGG 2 cut(s) 449, 997
AsuHPI GGTGA 4 cut(s) 67, 431, 640, 705
AvaI CYCGRG 2 cut(s) 6, 615
AvaII GGWCC 2 cut(s) 31, 731
AvrII CCTAGG 1 cut(s) 763
BalI TGGCCA 1 cut(s) 227
BamHI GGATCC 1 cut(s) 289
BanI GGYRCC 2 cut(s) 22, 878
BbrPI CACGTG 1 cut(s) 782
BbvI GCAGC 5 cut(s) 267, 505, 570, 636, 888
BccI CCATC 2 cut(s) 143, 869
BceAI ACGGC 1 cut(s) 201
BciVI GTATCC 2 cut(s) 756, 1073
BclI TGATCA 1 cut(s) 801
BcnI CCSGG 2 cut(s) 449, 997
BcoDI GTCTC 3 cut(s) 438, 506, 1015
BfaI CTAG 1 cut(s) 764
BfmI CTRYAG 1 cut(s) 108
BfuI GTATCC 2 cut(s) 756, 1073
BisI GCNGC 6 cut(s) 281, 519, 559, 562, 650, 902
BlnI CCTAGG 1 cut(s) 763
BlsI GCNGC 6 cut(s) 282, 520, 560, 563, 651, 903
Bme1390I CCNGG 2 cut(s) 449, 997
Bme18I GGWCC 2 cut(s) 31, 731
BmeT110I CYCGRG 2 cut(s) 6, 615
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 3 cut(s) 31, 450, 731
BmiI GGNNCC 4 cut(s) 24, 33, 291, 880
BmrFI CCNGG 2 cut(s) 449, 997
BmsI GCATC 1 cut(s) 716
BoxI GACNNNNGTC 1 cut(s) 729
BpuEI CTTGAG 3 cut(s) 530, 872, 998
BpuMI CCSGG 2 cut(s) 449, 997
BsaAI YACGTR 3 cut(s) 497, 782, 1062
BsaJI CCNNGG 4 cut(s) 294, 453, 763, 1161
BsaWI WCCGGW 1 cut(s) 313
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 223, 454, 568, 764
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 1 cut(s) 716
BseDI CCNNGG 4 cut(s) 294, 453, 763, 1161
BseGI GGATG 2 cut(s) 304, 640
BseLI CCNNNNNNNGG 5 cut(s) 40, 223, 454, 568, 764
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 1 cut(s) 716
BseX3I CGGCCG 1 cut(s) 214
BseXI GCAGC 5 cut(s) 267, 505, 570, 636, 888
BseYI CCCAGC 1 cut(s) 395
Bsh1236I CGCG 1 cut(s) 165
Bsh1285I CGRYCG 1 cut(s) 217
BshFI GGCC 3 cut(s) 216, 227, 452
BshNI GGYRCC 2 cut(s) 22, 878
BsiEI CGRYCG 1 cut(s) 217
BsiHKCI CYCGRG 2 cut(s) 6, 615
BsiSI CCGG 4 cut(s) 26, 314, 448, 996
BsiWI CGTACG 1 cut(s) 497
BslFI GGGAC 1 cut(s) 1012
BslI CCNNNNNNNGG 5 cut(s) 40, 223, 454, 568, 764
BsmAI GTCTC 3 cut(s) 438, 506, 1015
BsmBI CGTCTC 1 cut(s) 1015
BsmFI GGGAC 1 cut(s) 1012
BsnI GGCC 3 cut(s) 216, 227, 452
BsoBI CYCGRG 2 cut(s) 6, 615
Bsp143I GATC 4 cut(s) 166, 289, 801, 1175
Bsp68I TCGCGA 1 cut(s) 165
BspACI CCGC 4 cut(s) 44, 53, 416, 562
BspANI GGCC 3 cut(s) 216, 227, 452
BspCNI CTCAG 1 cut(s) 403
BspFNI CGCG 1 cut(s) 165
BspLI GGNNCC 4 cut(s) 24, 33, 291, 880
BspPI GGATC 2 cut(s) 284, 297
BspQI GCTCTTC 1 cut(s) 318
BspT107I GGYRCC 2 cut(s) 22, 878
BsrFI RCCGGY 1 cut(s) 25
BsrI ACTGG 1 cut(s) 716
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 4 cut(s) 294, 453, 763, 1161
BssMI GATC 4 cut(s) 166, 289, 801, 1175
BssT1I CCWWGG 4 cut(s) 294, 453, 763, 1161
Bst4CI ACNGT 6 cut(s) 95, 112, 339, 808, 1003, 1073
Bst6I CTCTTC 3 cut(s) 267, 318, 584
BstBAI YACGTR 3 cut(s) 497, 782, 1062
BstC8I GCNNGC 3 cut(s) 163, 699, 1156
BstDEI CTNAG 3 cut(s) 411, 549, 989
BstENI CCTNNNNNAGG 1 cut(s) 762
BstF5I GGATG 2 cut(s) 304, 640
BstFNI CGCG 1 cut(s) 165
BstKTI GATC 4 cut(s) 169, 292, 804, 1178
BstMAI GTCTC 3 cut(s) 438, 506, 1015
BstMBI GATC 4 cut(s) 166, 289, 801, 1175
BstMCI CGRYCG 1 cut(s) 217
BstMWI GCNNNNNNNGC 7 cut(s) 50, 171, 470, 527, 646, 791, 973
BstNSI RCATGY 2 cut(s) 363, 1087
BstPAI GACNNNNGTC 1 cut(s) 729
BstSCI CCNGG 2 cut(s) 447, 995
BstSFI CTRYAG 1 cut(s) 108
BstSNI TACGTA 1 cut(s) 497
BstUI CGCG 1 cut(s) 165
BstV1I GCAGC 5 cut(s) 267, 505, 570, 636, 888
BstX2I RGATCY 2 cut(s) 289, 1175
BstXI CCANNNNNNTGG 2 cut(s) 1062, 1168
BstYI RGATCY 2 cut(s) 289, 1175
BstZI CGGCCG 1 cut(s) 214
BsuI GTATCC 2 cut(s) 756, 1073
BsuRI GGCC 3 cut(s) 216, 227, 452
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 2 cut(s) 304, 640
BtsI GCAGTG 1 cut(s) 264
BtsIMutI CAGTG 2 cut(s) 264, 804
BtuMI TCGCGA 1 cut(s) 165
Cac8I GCNNGC 3 cut(s) 163, 699, 1156
CaiI CAGNNNCTG 1 cut(s) 652
Cfr10I RCCGGY 1 cut(s) 25
Cfr13I GGNCC 3 cut(s) 31, 450, 731
CseI GACGC 1 cut(s) 997
Csp6I GTAC 3 cut(s) 494, 498, 620
CviAII CATG 6 cut(s) 139, 223, 360, 1015, 1045, 1084
CviQI GTAC 3 cut(s) 494, 498, 620
DdeI CTNAG 3 cut(s) 411, 549, 989
DpnI GATC 4 cut(s) 168, 291, 803, 1177
DpnII GATC 4 cut(s) 166, 289, 801, 1175
EaeI YGGCCR 2 cut(s) 214, 225
EagI CGGCCG 1 cut(s) 214
Eam1104I CTCTTC 3 cut(s) 267, 318, 584
EarI CTCTTC 3 cut(s) 267, 318, 584
EclXI CGGCCG 1 cut(s) 214
Eco105I TACGTA 1 cut(s) 497
Eco130I CCWWGG 4 cut(s) 294, 453, 763, 1161
Eco47I GGWCC 2 cut(s) 31, 731
Eco52I CGGCCG 1 cut(s) 214
Eco72I CACGTG 1 cut(s) 782
Eco88I CYCGRG 2 cut(s) 6, 615
EcoNI CCTNNNNNAGG 1 cut(s) 762
EcoT14I CCWWGG 4 cut(s) 294, 453, 763, 1161
ErhI CCWWGG 4 cut(s) 294, 453, 763, 1161
Esp3I CGTCTC 1 cut(s) 1015
FaeI CATG 6 cut(s) 142, 226, 363, 1018, 1048, 1087
FaqI GGGAC 1 cut(s) 1012
FatI CATG 6 cut(s) 138, 222, 359, 1014, 1044, 1083
FauI CCCGC 1 cut(s) 409
FauNDI CATATG 1 cut(s) 1150
FbaI TGATCA 1 cut(s) 801
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 6 cut(s) 281, 519, 559, 562, 650, 902
FokI GGATG 2 cut(s) 311, 647
Fsp4HI GCNGC 6 cut(s) 281, 519, 559, 562, 650, 902
FspBI CTAG 1 cut(s) 764
GluI GCNGC 6 cut(s) 281, 519, 559, 562, 650, 902
GsaI CCCAGC 1 cut(s) 399
HaeIII GGCC 3 cut(s) 216, 227, 452
HapII CCGG 4 cut(s) 26, 314, 448, 996
HgaI GACGC 1 cut(s) 997
Hin1II CATG 6 cut(s) 142, 226, 363, 1018, 1048, 1087
HincII GTYRAC 2 cut(s) 181, 609
HindII GTYRAC 2 cut(s) 181, 609
HinfI GANTC 4 cut(s) 431, 725, 961, 970
HpaII CCGG 4 cut(s) 26, 314, 448, 996
HphI GGTGA 4 cut(s) 67, 431, 640, 705
Hpy166II GTNNAC 5 cut(s) 31, 124, 151, 181, 609
Hpy188I TCNGA 2 cut(s) 75, 1175
Hpy188III TCNNGA 5 cut(s) 8, 164, 287, 690, 1179
Hpy8I GTNNAC 5 cut(s) 31, 124, 151, 181, 609
HpyAV CCTTC 1 cut(s) 210
HpyCH4III ACNGT 6 cut(s) 95, 112, 339, 808, 1003, 1073
HpyCH4IV ACGT 7 cut(s) 120, 306, 496, 545, 781, 828, 1061
HpyCH4V TGCA 4 cut(s) 142, 707, 785, 868
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 171, 470, 527, 646, 791, 973
HpyF3I CTNAG 3 cut(s) 411, 549, 989
HpySE526I ACGT 7 cut(s) 120, 306, 496, 545, 781, 828, 1061
Hsp92II CATG 6 cut(s) 142, 226, 363, 1018, 1048, 1087
Ksp22I TGATCA 1 cut(s) 801
Kzo9I GATC 4 cut(s) 166, 289, 801, 1175
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 2 cut(s) 244, 1163
Lsp1109I GCAGC 5 cut(s) 267, 505, 570, 636, 888
LweI GCATC 1 cut(s) 716
MaeI CTAG 1 cut(s) 764
MaeII ACGT 7 cut(s) 120, 306, 496, 545, 781, 828, 1061
MaeIII GTNAC 5 cut(s) 218, 722, 846, 1073, 1105
MalI GATC 4 cut(s) 168, 291, 803, 1177
MboI GATC 4 cut(s) 166, 289, 801, 1175
MboII GAAGA 8 cut(s) 70, 73, 161, 284, 335, 437, 601, 702
MfeI CAATTG 1 cut(s) 739
MflI RGATCY 2 cut(s) 289, 1175
MlsI TGGCCA 1 cut(s) 227
MluCI AATT 8 cut(s) 238, 474, 565, 584, 739, 890, 1035, 1113
MluNI TGGCCA 1 cut(s) 227
MlyI GAGTC 2 cut(s) 440, 719
MmeI TCCRAC 1 cut(s) 1153
Mox20I TGGCCA 1 cut(s) 227
MroXI GAANNNNTTC 2 cut(s) 327, 386
MscI TGGCCA 1 cut(s) 227
MseI TTAA 3 cut(s) 252, 351, 936
MslI CAYNNNNRTG 1 cut(s) 1060
Msp20I TGGCCA 1 cut(s) 227
MspA1I CMGCKG 2 cut(s) 649, 967
MspI CCGG 4 cut(s) 26, 314, 448, 996
MspR9I CCNGG 2 cut(s) 449, 997
MunI CAATTG 1 cut(s) 739
MvnI CGCG 1 cut(s) 165
MwoI GCNNNNNNNGC 7 cut(s) 50, 171, 470, 527, 646, 791, 973
NciI CCSGG 2 cut(s) 449, 997
NdeI CATATG 1 cut(s) 1150
NdeII GATC 4 cut(s) 166, 289, 801, 1175
NlaIII CATG 6 cut(s) 142, 226, 363, 1018, 1048, 1087
NlaIV GGNNCC 4 cut(s) 24, 33, 291, 880
NmeAIII GCCGAG 1 cut(s) 192
NmuCI GTSAC 3 cut(s) 218, 722, 1105
NruI TCGCGA 1 cut(s) 165
NspI RCATGY 2 cut(s) 363, 1087
PaeR7I CTCGAG 1 cut(s) 6
PciI ACATGT 2 cut(s) 359, 1083
PciSI GCTCTTC 1 cut(s) 318
PdmI GAANNNNTTC 2 cut(s) 327, 386
PfeI GAWTC 2 cut(s) 961, 970
Pfl23II CGTACG 1 cut(s) 497
PfoI TCCNGGA 1 cut(s) 995
PkrI GCNGC 6 cut(s) 282, 520, 560, 563, 651, 903
PleI GAGTC 2 cut(s) 439, 719
PmaCI CACGTG 1 cut(s) 782
PmlI CACGTG 1 cut(s) 782
PpsI GAGTC 2 cut(s) 439, 719
Ppu21I YACGTR 3 cut(s) 497, 782, 1062
PscI ACATGT 2 cut(s) 359, 1083
PshAI GACNNNNGTC 1 cut(s) 729
PshBI ATTAAT 1 cut(s) 936
Psp1406I AACGTT 1 cut(s) 306
PspCI CACGTG 1 cut(s) 782
PspFI CCCAGC 1 cut(s) 395
PspLI CGTACG 1 cut(s) 497
PspN4I GGNNCC 4 cut(s) 24, 33, 291, 880
PspPI GGNCC 3 cut(s) 31, 450, 731
PstNI CAGNNNCTG 1 cut(s) 652
PsuI RGATCY 2 cut(s) 289, 1175
PvuII CAGCTG 2 cut(s) 649, 967
RruI TCGCGA 1 cut(s) 165
RsaI GTAC 3 cut(s) 495, 499, 621
RsaNI GTAC 3 cut(s) 494, 498, 620
RseI CAYNNNNRTG 1 cut(s) 1060
SalI GTCGAC 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 3 cut(s) 252, 351, 936
SatI GCNGC 6 cut(s) 281, 519, 559, 562, 650, 902
Sau3AI GATC 4 cut(s) 166, 289, 801, 1175
Sau96I GGNCC 3 cut(s) 31, 450, 731
SchI GAGTC 2 cut(s) 440, 719
ScrFI CCNGG 2 cut(s) 449, 997
SfaNI GCATC 1 cut(s) 716
SfcI CTRYAG 1 cut(s) 108
Sfr274I CTCGAG 1 cut(s) 6
SinI GGWCC 2 cut(s) 31, 731
SlaI CTCGAG 1 cut(s) 6
SmiMI CAYNNNNRTG 1 cut(s) 1060
SmlI CTYRAG 4 cut(s) 6, 509, 851, 977
SmoI CTYRAG 4 cut(s) 6, 509, 851, 977
SnaBI TACGTA 1 cut(s) 497
Sse9I AATT 8 cut(s) 238, 474, 565, 584, 739, 890, 1035, 1113
SsiI CCGC 4 cut(s) 44, 53, 416, 562
SspI AATATT 1 cut(s) 1051
SspMI CTAG 1 cut(s) 764
StyD4I CCNGG 2 cut(s) 447, 995
StyI CCWWGG 4 cut(s) 294, 453, 763, 1161
TaaI ACNGT 6 cut(s) 95, 112, 339, 808, 1003, 1073
TaiI ACGT 7 cut(s) 123, 309, 499, 548, 784, 831, 1064
TaqI TCGA 3 cut(s) 7, 180, 948
TasI AATT 8 cut(s) 238, 474, 565, 584, 739, 890, 1035, 1113
TauI GCSGC 1 cut(s) 564
TfiI GAWTC 2 cut(s) 961, 970
Tru1I TTAA 3 cut(s) 252, 351, 936
Tru9I TTAA 3 cut(s) 252, 351, 936
TscAI CASTG 2 cut(s) 271, 811
TseFI GTSAC 3 cut(s) 218, 722, 1105
TseI GCWGC 5 cut(s) 280, 518, 558, 649, 901
Tsp45I GTSAC 3 cut(s) 218, 722, 1105
TspDTI ATGAA 5 cut(s) 315, 438, 552, 1011, 1061
TspGWI ACGGA 1 cut(s) 1092
TspRI CASTG 2 cut(s) 271, 811
VpaK11BI GGWCC 2 cut(s) 31, 731
VspI ATTAAT 1 cut(s) 936
XagI CCTNNNNNAGG 1 cut(s) 762
XapI RAATTY 2 cut(s) 1035, 1113
XceI RCATGY 2 cut(s) 363, 1087
XcmI CCANNNNNNNNNTGG 1 cut(s) 1021
XhoI CTCGAG 1 cut(s) 6
XmaJI CCTAGG 1 cut(s) 763
XmiI GTMKAC 1 cut(s) 180
XmnI GAANNNNTTC 2 cut(s) 327, 386
XspI CTAG 1 cut(s) 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.