RLG00000009961

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
61227310 .. 61265422
38113 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009961

Sequence Viewer

Length: 1200 bp
ATGACACGAGGAGGAGGAGATGGGGAAGCCGTTGCGGCGGTGGCGGTGGTGGACCCTCAAGCGGTGGTGGCGGTGAAGAAGAAGTCGTCTCGGAGCTGGGTTTTGCTGGACGCGACGGGACAAGCGACGGTGTTGGATGTGGACAAGTATGCAATCATGCACAGAGTCCACATTCACGCTCGGGATCTCCGCATTGTCGACCCTCTGCTCTCTTACCCTTCCGCCATTCTCGGACGTGACAGGGCTATTGTTCTCAATCTGGAGCATATTAAAGCGATAATTACTGCTGAAGAGGTGCTGCTTCGGGATCCGTTGGATGAAAATGTTATTCCTGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTAAATTCTAACCGTGAAAATCAAACAGATGGAAGAGAGTTCCCTGCTGGGCACAATGATGTTGATGCGGGTGAAGAAGATGAGTCTCCATTTGAATTCCGGGCCTTGGAGGTAGCTTTGGAAGCAATTTGTAGTTTTCTTGCTGCACGTACGACAGAACTGGAGACTGCTGCTTATCCGGCTCTAGATGAGCTTACCTCTAAGATTAGTAGCCGCAATTTGGATAGGGTTCGTAAATTGAAAAGTGCAATGACAAGGTTGACTGCACGGGTCCAAAAGGTGAGGGATGAGCTCGAACAGCTGCTGGATGATGATGATGATATGGCCGACCTTTACTTGTCAAGAAAGTTGGTGGGTGCATGTTCACCAGTTAGTGCCTCTGGTCCTCCCAATTGGTATCCTGCCTCCCCTACCATAGGCTCAAAAATATCACGGGCAAGTAGAGCAAGTATGGTAACTGTTCGTGGAGATGAGAATGACGTTGAGGAACTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGCACCTTGAACAAGTTAGCTACGCTGCGTGAATATATTGATGATACGGAGGATTACATAAATATTCAGCTTGATAACCACAGGAATCAGTTAATTCAGCTTGAGCTTATTCTTAGTTCTGGAACTGTTAGTTTATCCATGTATTCTTTGGTGTGTGGAATTTTTGGCGTGAATATCCCATATTCGTGGAACCAGGATCATGGATACATGTTTAAATGGGTTTGGATTGTCACAGGAATAGTATGTTTCTCTGTTTTCATAGTAATTGTAGCATATGCTCGCCACAAAGGGTTGATCGGATCGTGA

Protein Analysis

400

Amino Acids

44.37

Weight (kDa)

4.93

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 36 - 238 1.2e-26 Magnesium transporter MRS2-like
MRS2-like PF22099 279 - 326 6.3e-08 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 896
AccI GTMKAC 1 cut(s) 198
AccII CGCG 1 cut(s) 113
AciI CCGC 9 cut(s) 35, 38, 44, 62, 71, 190, 222, 434, 580
AclWI GGATC 4 cut(s) 192, 302, 315, 1098
AcoI YGGCCR 1 cut(s) 690
AcsI RAATTY 3 cut(s) 370, 461, 1053
AcuI CTGAAG 1 cut(s) 309
AfaI GTAC 1 cut(s) 517
AfiI CCNNNNNNNGG 4 cut(s) 61, 472, 586, 782
AflIII ACRYGT 1 cut(s) 1101
AgsI TTSAA 6 cut(s) 341, 350, 461, 607, 860, 904
AjiI CACGTC 1 cut(s) 236
AjnI CCWGG 1 cut(s) 1086
Alw21I GWGCWC 1 cut(s) 660
Alw26I GTCTC 3 cut(s) 93, 456, 524
AlwI GGATC 4 cut(s) 192, 302, 315, 1098
AlwNI CAGNNNCTG 1 cut(s) 670
Ama87I CYCGRG 1 cut(s) 180
AoxI GGCC 2 cut(s) 468, 690
ApeKI GCWGC 5 cut(s) 298, 509, 536, 667, 919
ApoI RAATTY 3 cut(s) 370, 461, 1053
Asp700I GAANNNNTTC 1 cut(s) 345
AspS9I GGNCC 4 cut(s) 52, 468, 637, 749
AsuC2I CCSGG 1 cut(s) 467
AsuHPI GGTGA 4 cut(s) 85, 449, 658, 723
AvaI CYCGRG 1 cut(s) 180
AvaII GGWCC 3 cut(s) 52, 637, 749
BaeGI GKGCMC 1 cut(s) 420
BamHI GGATCC 1 cut(s) 307
BanI GGYRCC 1 cut(s) 896
BanII GRGCYC 1 cut(s) 660
BauI CACGAG 1 cut(s) 6
Bbv12I GWGCWC 1 cut(s) 660
BbvI GCAGC 5 cut(s) 285, 496, 523, 654, 906
BccI CCATC 3 cut(s) 14, 389, 887
BceAI ACGGC 1 cut(s) 14
BciT130I CCWGG 1 cut(s) 1088
BciVI GTATCC 2 cut(s) 774, 1091
BcnI CCSGG 1 cut(s) 467
BcoDI GTCTC 3 cut(s) 93, 456, 524
BfaI CTAG 1 cut(s) 551
BfuI GTATCC 2 cut(s) 774, 1091
BglI GCCNNNNNGGC 1 cut(s) 35
BisI GCNGC 7 cut(s) 36, 299, 510, 537, 580, 668, 920
BlsI GCNGC 7 cut(s) 37, 300, 511, 538, 581, 669, 921
Bme1390I CCNGG 2 cut(s) 467, 1088
Bme18I GGWCC 3 cut(s) 52, 637, 749
BmeT110I CYCGRG 1 cut(s) 180
BmgBI CACGTC 1 cut(s) 236
BmgT120I GGNCC 4 cut(s) 52, 468, 637, 749
BmiI GGNNCC 5 cut(s) 54, 309, 638, 898, 1085
BmrFI CCNGG 2 cut(s) 467, 1088
BmsI GCATC 1 cut(s) 421
BplI GAGNNNNNCTC 2 cut(s) 548, 580
BpmI CTGGAG 3 cut(s) 281, 548, 890
BpuEI CTTGAG 2 cut(s) 42, 1016
BpuMI CCSGG 1 cut(s) 467
BsaAI YACGTR 1 cut(s) 515
BsaJI CCNNGG 1 cut(s) 471
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 472, 586, 782
Bse1I ACTGG 3 cut(s) 531, 734, 873
Bse3DI GCAATG 1 cut(s) 621
BseBI CCWGG 1 cut(s) 1088
BseDI CCNNGG 1 cut(s) 471
BseGI GGATG 4 cut(s) 142, 322, 658, 679
BseLI CCNNNNNNNGG 4 cut(s) 61, 472, 586, 782
BseMI GCAATG 1 cut(s) 621
BseNI ACTGG 3 cut(s) 531, 734, 873
BseRI GAGGAG 3 cut(s) 24, 27, 30
BseSI GKGCMC 1 cut(s) 420
BseXI GCAGC 5 cut(s) 285, 496, 523, 654, 906
BseYI CCCAGC 2 cut(s) 96, 413
BsgI GTGCAG 2 cut(s) 495, 615
Bsh1236I CGCG 1 cut(s) 113
BshFI GGCC 2 cut(s) 470, 692
BshNI GGYRCC 1 cut(s) 896
BsiHKAI GWGCWC 1 cut(s) 660
BsiHKCI CYCGRG 1 cut(s) 180
BsiSI CCGG 2 cut(s) 466, 545
BsiWI CGTACG 1 cut(s) 515
BslFI GGGAC 1 cut(s) 132
BslI CCNNNNNNNGG 4 cut(s) 61, 472, 586, 782
BsmAI GTCTC 3 cut(s) 93, 456, 524
BsmBI CGTCTC 1 cut(s) 93
BsmFI GGGAC 1 cut(s) 132
BsnI GGCC 2 cut(s) 470, 692
BsoBI CYCGRG 1 cut(s) 180
Bsp1286I GDGCHC 2 cut(s) 420, 660
Bsp143I GATC 5 cut(s) 184, 307, 1090, 1188, 1193
BspACI CCGC 9 cut(s) 35, 38, 44, 62, 71, 190, 222, 434, 580
BspANI GGCC 2 cut(s) 470, 692
BspFNI CGCG 1 cut(s) 113
BspLI GGNNCC 5 cut(s) 54, 309, 638, 898, 1085
BspPI GGATC 4 cut(s) 192, 302, 315, 1098
BspQI GCTCTTC 1 cut(s) 336
BspT107I GGYRCC 1 cut(s) 896
BsrDI GCAATG 1 cut(s) 621
BsrI ACTGG 3 cut(s) 531, 734, 873
BssECI CCNNGG 1 cut(s) 471
BssMI GATC 5 cut(s) 184, 307, 1090, 1188, 1193
BssSI CACGAG 1 cut(s) 6
BssT1I CCWWGG 1 cut(s) 471
Bst2BI CACGAG 1 cut(s) 6
Bst2UI CCWGG 1 cut(s) 1088
Bst4CI ACNGT 5 cut(s) 130, 357, 380, 826, 1021
Bst6I CTCTTC 3 cut(s) 285, 336, 394
BstBAI YACGTR 1 cut(s) 515
BstC8I GCNNGC 1 cut(s) 1174
BstDEI CTNAG 2 cut(s) 567, 1007
BstENI CCTNNNNNAGG 1 cut(s) 780
BstF5I GGATG 4 cut(s) 142, 322, 658, 679
BstFNI CGCG 1 cut(s) 113
BstKTI GATC 5 cut(s) 187, 310, 1093, 1191, 1196
BstMAI GTCTC 3 cut(s) 93, 456, 524
BstMBI GATC 5 cut(s) 184, 307, 1090, 1188, 1193
BstMWI GCNNNNNNNGC 7 cut(s) 35, 41, 68, 488, 545, 664, 809
BstNI CCWGG 1 cut(s) 1088
BstNSI RCATGY 2 cut(s) 729, 1105
BstSCI CCNGG 2 cut(s) 465, 1086
BstSLI GKGCMC 1 cut(s) 420
BstUI CGCG 1 cut(s) 113
BstV1I GCAGC 5 cut(s) 285, 496, 523, 654, 906
BstX2I RGATCY 2 cut(s) 184, 307
BstXI CCANNNNNNTGG 2 cut(s) 1080, 1094
BstYI RGATCY 2 cut(s) 184, 307
BsuI GTATCC 2 cut(s) 774, 1091
BsuRI GGCC 2 cut(s) 470, 692
BtrI CACGTC 1 cut(s) 236
BtsCI GGATG 4 cut(s) 142, 322, 658, 679
Cac8I GCNNGC 1 cut(s) 1174
CaiI CAGNNNCTG 1 cut(s) 670
Cfr13I GGNCC 4 cut(s) 52, 468, 637, 749
CseI GACGC 1 cut(s) 119
Csp6I GTAC 1 cut(s) 516
CviAII CATG 5 cut(s) 157, 726, 1033, 1094, 1102
CviQI GTAC 1 cut(s) 516
DdeI CTNAG 2 cut(s) 567, 1007
DpnI GATC 5 cut(s) 186, 309, 1092, 1190, 1195
DpnII GATC 5 cut(s) 184, 307, 1090, 1188, 1193
DraI TTTAAA 1 cut(s) 1108
EaeI YGGCCR 1 cut(s) 690
Eam1104I CTCTTC 3 cut(s) 285, 336, 394
EarI CTCTTC 3 cut(s) 285, 336, 394
EciI GGCGGA 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 1 cut(s) 471
Eco24I GRGCYC 1 cut(s) 660
Eco47I GGWCC 3 cut(s) 52, 637, 749
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 1 cut(s) 309
Eco88I CYCGRG 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 658
EcoNI CCTNNNNNAGG 1 cut(s) 780
EcoRI GAATTC 1 cut(s) 461
EcoRII CCWGG 1 cut(s) 1086
EcoT14I CCWWGG 1 cut(s) 471
EcoT38I GRGCYC 1 cut(s) 660
ErhI CCWWGG 1 cut(s) 471
Esp3I CGTCTC 1 cut(s) 93
FaeI CATG 5 cut(s) 160, 729, 1036, 1097, 1105
FaqI GGGAC 1 cut(s) 132
FatI CATG 5 cut(s) 156, 725, 1032, 1093, 1101
FauI CCCGC 1 cut(s) 427
FauNDI CATATG 1 cut(s) 1168
FblI GTMKAC 1 cut(s) 198
Fnu4HI GCNGC 7 cut(s) 36, 299, 510, 537, 580, 668, 920
FokI GGATG 4 cut(s) 149, 329, 665, 686
FriOI GRGCYC 1 cut(s) 660
Fsp4HI GCNGC 7 cut(s) 36, 299, 510, 537, 580, 668, 920
FspBI CTAG 1 cut(s) 551
GluI GCNGC 7 cut(s) 36, 299, 510, 537, 580, 668, 920
GsaI CCCAGC 2 cut(s) 100, 417
GsuI CTGGAG 3 cut(s) 281, 548, 890
HaeIII GGCC 2 cut(s) 470, 692
HapII CCGG 2 cut(s) 466, 545
HgaI GACGC 1 cut(s) 119
Hin1II CATG 5 cut(s) 160, 729, 1036, 1097, 1105
HincII GTYRAC 2 cut(s) 199, 627
HindII GTYRAC 2 cut(s) 199, 627
HinfI GANTC 3 cut(s) 165, 449, 979
HpaII CCGG 2 cut(s) 466, 545
HphI GGTGA 4 cut(s) 85, 449, 658, 723
Hpy166II GTNNAC 6 cut(s) 52, 142, 169, 199, 627, 731
Hpy188I TCNGA 3 cut(s) 93, 233, 1193
Hpy188III TCNNGA 7 cut(s) 182, 260, 305, 551, 708, 1014, 1197
Hpy8I GTNNAC 6 cut(s) 52, 142, 169, 199, 627, 731
Hpy99I CGWCG 2 cut(s) 118, 130
HpyAV CCTTC 1 cut(s) 228
HpyCH4III ACNGT 5 cut(s) 130, 357, 380, 826, 1021
HpyCH4IV ACGT 3 cut(s) 235, 514, 846
HpyCH4V TGCA 7 cut(s) 152, 160, 512, 614, 632, 725, 886
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 41, 68, 488, 545, 664, 809
HpyF3I CTNAG 2 cut(s) 567, 1007
HpySE526I ACGT 3 cut(s) 235, 514, 846
Hsp92II CATG 5 cut(s) 160, 729, 1036, 1097, 1105
Kzo9I GATC 5 cut(s) 184, 307, 1090, 1188, 1193
LguI GCTCTTC 1 cut(s) 336
LmnI GCTCC 2 cut(s) 93, 262
Lsp1109I GCAGC 5 cut(s) 285, 496, 523, 654, 906
LweI GCATC 1 cut(s) 421
MaeI CTAG 1 cut(s) 551
MaeII ACGT 3 cut(s) 235, 514, 846
MaeIII GTNAC 4 cut(s) 236, 820, 864, 1123
MalI GATC 5 cut(s) 186, 309, 1092, 1190, 1195
MboI GATC 5 cut(s) 184, 307, 1090, 1188, 1193
MboII GAAGA 7 cut(s) 88, 91, 302, 353, 411, 452, 455
MfeI CAATTG 1 cut(s) 757
MflI RGATCY 2 cut(s) 184, 307
MhlI GDGCHC 2 cut(s) 420, 660
MlyI GAGTC 2 cut(s) 174, 458
MmeI TCCRAC 2 cut(s) 114, 294
MroXI GAANNNNTTC 1 cut(s) 345
MseI TTAA 3 cut(s) 270, 986, 1107
MslI CAYNNNNRTG 2 cut(s) 423, 1078
MspA1I CMGCKG 1 cut(s) 667
MspI CCGG 2 cut(s) 466, 545
MspR9I CCNGG 2 cut(s) 467, 1088
MunI CAATTG 1 cut(s) 757
MvaI CCWGG 1 cut(s) 1088
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 7 cut(s) 35, 41, 68, 488, 545, 664, 809
NciI CCSGG 1 cut(s) 467
NdeI CATATG 1 cut(s) 1168
NdeII GATC 5 cut(s) 184, 307, 1090, 1188, 1193
NlaIII CATG 5 cut(s) 160, 729, 1036, 1097, 1105
NlaIV GGNNCC 5 cut(s) 54, 309, 638, 898, 1085
NmuCI GTSAC 2 cut(s) 236, 1123
NspI RCATGY 2 cut(s) 729, 1105
PciI ACATGT 1 cut(s) 1101
PciSI GCTCTTC 1 cut(s) 336
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 1 cut(s) 979
Pfl23II CGTACG 1 cut(s) 515
PkrI GCNGC 7 cut(s) 37, 300, 511, 538, 581, 669, 921
PleI GAGTC 2 cut(s) 173, 457
PpsI GAGTC 2 cut(s) 173, 457
Ppu21I YACGTR 1 cut(s) 515
PscI ACATGT 1 cut(s) 1101
Psp124BI GAGCTC 1 cut(s) 660
Psp6I CCWGG 1 cut(s) 1086
PspFI CCCAGC 2 cut(s) 96, 413
PspGI CCWGG 1 cut(s) 1086
PspLI CGTACG 1 cut(s) 515
PspN4I GGNNCC 5 cut(s) 54, 309, 638, 898, 1085
PspPI GGNCC 4 cut(s) 52, 468, 637, 749
PstNI CAGNNNCTG 1 cut(s) 670
PsuI RGATCY 2 cut(s) 184, 307
PvuII CAGCTG 1 cut(s) 667
RsaI GTAC 1 cut(s) 517
RsaNI GTAC 1 cut(s) 516
RseI CAYNNNNRTG 2 cut(s) 423, 1078
SacI GAGCTC 1 cut(s) 660
SalI GTCGAC 1 cut(s) 197
SapI GCTCTTC 1 cut(s) 336
SaqAI TTAA 3 cut(s) 270, 986, 1107
SatI GCNGC 7 cut(s) 36, 299, 510, 537, 580, 668, 920
Sau3AI GATC 5 cut(s) 184, 307, 1090, 1188, 1193
Sau96I GGNCC 4 cut(s) 52, 468, 637, 749
SchI GAGTC 2 cut(s) 174, 458
ScrFI CCNGG 2 cut(s) 467, 1088
SduI GDGCHC 2 cut(s) 420, 660
SfaNI GCATC 1 cut(s) 421
SinI GGWCC 3 cut(s) 52, 637, 749
SmiMI CAYNNNNRTG 2 cut(s) 423, 1078
SmlI CTYRAG 2 cut(s) 57, 995
SmoI CTYRAG 2 cut(s) 57, 995
SsiI CCGC 9 cut(s) 35, 38, 44, 62, 71, 190, 222, 434, 580
SspI AATATT 1 cut(s) 958
SspMI CTAG 1 cut(s) 551
SstI GAGCTC 1 cut(s) 660
StyD4I CCNGG 2 cut(s) 465, 1086
StyI CCWWGG 1 cut(s) 471
TaaI ACNGT 5 cut(s) 130, 357, 380, 826, 1021
TaiI ACGT 3 cut(s) 238, 517, 849
TaqI TCGA 2 cut(s) 198, 660
TauI GCSGC 2 cut(s) 38, 582
TfiI GAWTC 1 cut(s) 979
Tru1I TTAA 3 cut(s) 270, 986, 1107
Tru9I TTAA 3 cut(s) 270, 986, 1107
TseFI GTSAC 2 cut(s) 236, 1123
TseI GCWGC 5 cut(s) 298, 509, 536, 667, 919
Tsp45I GTSAC 2 cut(s) 236, 1123
TspDTI ATGAA 2 cut(s) 333, 1141
TspGWI ACGGA 2 cut(s) 300, 956
VpaK11BI GGWCC 3 cut(s) 52, 637, 749
XagI CCTNNNNNAGG 1 cut(s) 780
XapI RAATTY 3 cut(s) 370, 461, 1053
XbaI TCTAGA 1 cut(s) 550
XceI RCATGY 2 cut(s) 729, 1105
XcmI CCANNNNNNNNNTGG 1 cut(s) 1039
XmiI GTMKAC 1 cut(s) 198
XmnI GAANNNNTTC 1 cut(s) 345
XspI CTAG 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.