RLG00000012309

Magnesium transporter MRS2-I-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
17388328 .. 17393223
4896 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012309

Sequence Viewer

Length: 1404 bp
ATGATTGCTTTGGAAATGGCTCGAGATGGGTCCCTAGTTAATTTGGAGACTCAAGCTCAAGCTAACAAGAAGACTGCAGCTTTAAGGAGCTGGATTTCATTAGACCAAGATGGCCAAGGAACCGTTTTGGATTTGGACAAGTATGCTATTATGCGCCGAGTTAACATTCACGCTCGAGATCTTCGGCTTCTTGATCCATTGCTATCCTATCCTTCCACAATTTTGGGCAGAGAGAAAGTCATTGTTCTCAATTTGGAGCACATCAAAGCAATAATCACAGCCGAGGAGGTATTGCTTAGAGACCCATTTGATGATAATGTGCTGCCTATTGTTGAGGAACTTCAAAGACGTTTGCCTCCAACAAGGGCCAATTTCAATGGCCCAGGAGAAGAAGAAGACTCCGGGTTACAAAAAGATGTTGAAACCAGTGAAGATGATGATTTTCCATTTGAATTCCGGGCATTAGAAGTTGCACTAGAAGCTATTTGTACTTCTCTTGATGCTTGCACAAGAGAACTAGAGAGTGATGCTTATCCAGCTTTAGATGAGCTGACCTCCAAGATCAGCAGTCGTAATTTGGATCGGGTGCGTAAGCTGAAGAGTGCAATGACCAGGTTGACAAATCGGGTTCAAAAGGTAAGGGATGAACTTGAACAGCTACTTGACGATGACGATGACATGGCCGACCTTTACTTATCAAGAAAGTTGGTTGGGACTTCACCTGTGAGTGACTCTGGTGCTCCAAATTGGTCTCTCGCATCTCCTACTATAACCATAGGCTCTAAAGTATCCAGAGCCAGCAGGGCAAGTGTAACAACAGTTCAGGAGGAGAATGACGTGGAGGAGCTTGAGATGTTGCTTGAGGCTTACTTTATGCAAATTGAAGGCACGTTGAATAAATTGACCACGCTGCGTGAATACATTGATGACACAGAGGATTACATTAACATCCAGCTTGACAATCATCGGAATCAGCTAATTCAGCTAGAGCTGTTTCTGAGTTCTGGAACTGTTTGTGTGTCTATATATTCTTTGGTGGCTGCAATATTTGGCATGAACATTAAATACACATGGAACGAAAATCATGAGCACGTATTCAAATGGGTGGTGATTACAACAGGATTAGTTGGCGCATCGATTTTCTTGTGTATAGTTTCTTTCATTTGTGATTTGAGAGTTTTCGATGATGGGGCCTTGTCACGTGCGGACGTGCCCTTCAATCAAATAATACCAAAAGAGATCACCAATCCTCGTCGAGACCCTTTTGTTCAATTCCATCGAAACCCACGTCAAATCCCTATAAATCCCACAAACCCATCTCACAATCTCACCTCCCAACAACGCTCTTTCTGTCTTCACCGACTGAGGAGAGATAAGTGTGTGGAAACATACAAGTGGACGTAA

Protein Analysis

468

Amino Acids

53.1

Weight (kDa)

4.91

Isoelectric Point (pI)

43.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 38 - 235 3.6e-26 Magnesium transporter MRS2-like
MRS2-like PF22099 275 - 323 2.2e-07 Magnesium transporter MRS2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 1205
AclWI GGATC 2 cut(s) 188, 588
AcoI YGGCCR 2 cut(s) 112, 681
AcsI RAATTY 1 cut(s) 452
AcuI CTGAAG 1 cut(s) 617
AcvI CACGTG 1 cut(s) 1202
AfaI GTAC 1 cut(s) 490
AjiI CACGTC 3 cut(s) 838, 1210, 1289
AjnI CCWGG 2 cut(s) 382, 611
Alw21I GWGCWC 3 cut(s) 261, 742, 1092
Alw26I GTCTC 4 cut(s) 41, 294, 756, 1251
AlwI GGATC 2 cut(s) 188, 588
Ama87I CYCGRG 2 cut(s) 21, 174
AoxI GGCC 5 cut(s) 112, 366, 379, 681, 1191
ApeKI GCWGC 4 cut(s) 77, 322, 910, 1040
ApoI RAATTY 1 cut(s) 452
ArsI GACNNNNNNTTYG 2 cut(s) 1273, 1305
AspLEI GCGC 2 cut(s) 156, 1133
AspS9I GGNCC 4 cut(s) 30, 366, 380, 1191
AsuC2I CCSGG 2 cut(s) 403, 458
AsuHPI GGTGA 5 cut(s) 711, 1120, 1234, 1321, 1349
AvaI CYCGRG 2 cut(s) 21, 174
AvaII GGWCC 1 cut(s) 30
BaeGI GKGCMC 1 cut(s) 1215
BalI TGGCCA 1 cut(s) 114
BbrPI CACGTG 1 cut(s) 1202
BbsI GAAGAC 3 cut(s) 77, 402, 1346
Bbv12I GWGCWC 3 cut(s) 261, 742, 1092
BbvI GCAGC 4 cut(s) 89, 309, 897, 1027
BccI CCATC 5 cut(s) 20, 104, 1181, 1284, 1324
BciT130I CCWGG 2 cut(s) 384, 613
BciVI GTATCC 1 cut(s) 799
BcnI CCSGG 2 cut(s) 403, 458
BcoDI GTCTC 4 cut(s) 41, 294, 756, 1251
BfaI CTAG 4 cut(s) 35, 476, 518, 986
BfmI CTRYAG 1 cut(s) 75
BfuI GTATCC 1 cut(s) 799
BglI GCCNNNNNGGC 1 cut(s) 803
BglII AGATCT 1 cut(s) 178
BisI GCNGC 4 cut(s) 78, 323, 911, 1041
BlsI GCNGC 4 cut(s) 79, 324, 912, 1042
Bme1390I CCNGG 4 cut(s) 384, 403, 458, 613
Bme18I GGWCC 1 cut(s) 30
BmeT110I CYCGRG 2 cut(s) 21, 174
BmgBI CACGTC 3 cut(s) 838, 1210, 1289
BmgT120I GGNCC 4 cut(s) 30, 366, 380, 1191
BmiI GGNNCC 4 cut(s) 31, 32, 121, 1192
BmrFI CCNGG 4 cut(s) 384, 403, 458, 613
BmsI GCATC 4 cut(s) 490, 517, 767, 1142
BpiI GAAGAC 3 cut(s) 77, 402, 1346
BplI GAGNNNNNCTC 2 cut(s) 539, 571
BpuEI CTTGAG 4 cut(s) 36, 42, 869, 881
BpuMI CCSGG 2 cut(s) 403, 458
Bsa29I ATCGAT 1 cut(s) 1136
BsaAI YACGTR 2 cut(s) 1093, 1202
BsaBI GATNNNNATC 1 cut(s) 531
BsaI GGTCTC 3 cut(s) 294, 756, 1251
BsaJI CCNNGG 3 cut(s) 115, 282, 382
Bse1I ACTGG 1 cut(s) 426
Bse3DI GCAATG 2 cut(s) 197, 612
Bse8I GATNNNNATC 1 cut(s) 531
BseBI CCWGG 2 cut(s) 384, 613
BseCI ATCGAT 1 cut(s) 1136
BseDI CCNNGG 3 cut(s) 115, 282, 382
BseGI GGATG 2 cut(s) 649, 948
BseJI GATNNNNATC 1 cut(s) 531
BseMI GCAATG 2 cut(s) 197, 612
BseMII CTCAG 2 cut(s) 989, 1355
BseNI ACTGG 1 cut(s) 426
BseRI GAGGAG 4 cut(s) 299, 842, 857, 1381
BseSI GKGCMC 1 cut(s) 1215
BseXI GCAGC 4 cut(s) 89, 309, 897, 1027
BshFI GGCC 5 cut(s) 114, 368, 381, 683, 1193
BshVI ATCGAT 1 cut(s) 1136
BsiHKAI GWGCWC 3 cut(s) 261, 742, 1092
BsiHKCI CYCGRG 2 cut(s) 21, 174
BsiSI CCGG 2 cut(s) 402, 457
BslFI GGGAC 2 cut(s) 16, 727
BsmAI GTCTC 4 cut(s) 41, 294, 756, 1251
BsmFI GGGAC 2 cut(s) 16, 727
BsnI GGCC 5 cut(s) 114, 368, 381, 683, 1193
Bso31I GGTCTC 3 cut(s) 294, 756, 1251
BsoBI CYCGRG 2 cut(s) 21, 174
Bsp1286I GDGCHC 4 cut(s) 261, 742, 1092, 1215
Bsp143I GATC 5 cut(s) 178, 193, 561, 580, 1239
BspACI CCGC 1 cut(s) 1205
BspANI GGCC 5 cut(s) 114, 368, 381, 683, 1193
BspCNI CTCAG 2 cut(s) 990, 1356
BspDI ATCGAT 1 cut(s) 1136
BspHI TCATGA 1 cut(s) 1084
BspLI GGNNCC 4 cut(s) 31, 32, 121, 1192
BspMAI CTGCAG 1 cut(s) 79
BspPI GGATC 2 cut(s) 188, 588
BspTNI GGTCTC 3 cut(s) 294, 756, 1251
BsrDI GCAATG 2 cut(s) 197, 612
BsrI ACTGG 1 cut(s) 426
BssECI CCNNGG 3 cut(s) 115, 282, 382
BssMI GATC 5 cut(s) 178, 193, 561, 580, 1239
BssT1I CCWWGG 1 cut(s) 115
Bst2UI CCWGG 2 cut(s) 384, 613
Bst4CI ACNGT 3 cut(s) 124, 820, 1012
Bst6I CTCTTC 1 cut(s) 593
BstBAI YACGTR 2 cut(s) 1093, 1202
BstC8I GCNNGC 2 cut(s) 505, 799
BstDEI CTNAG 3 cut(s) 296, 998, 1364
BstF5I GGATG 2 cut(s) 649, 948
BstHHI GCGC 2 cut(s) 156, 1133
BstKTI GATC 5 cut(s) 181, 196, 564, 583, 1242
BstMAI GTCTC 4 cut(s) 41, 294, 756, 1251
BstMBI GATC 5 cut(s) 178, 193, 561, 580, 1239
BstMWI GCNNNNNNNGC 4 cut(s) 479, 536, 803, 982
BstNI CCWGG 2 cut(s) 384, 613
BstSCI CCNGG 4 cut(s) 382, 401, 456, 611
BstSFI CTRYAG 1 cut(s) 75
BstSLI GKGCMC 1 cut(s) 1215
BstV1I GCAGC 4 cut(s) 89, 309, 897, 1027
BstV2I GAAGAC 3 cut(s) 77, 402, 1346
BstX2I RGATCY 1 cut(s) 178
BstXI CCANNNNNNTGG 1 cut(s) 223
BstYI RGATCY 1 cut(s) 178
Bsu15I ATCGAT 1 cut(s) 1136
BsuI GTATCC 1 cut(s) 799
BsuRI GGCC 5 cut(s) 114, 368, 381, 683, 1193
BsuTUI ATCGAT 1 cut(s) 1136
BtrI CACGTC 3 cut(s) 838, 1210, 1289
BtsCI GGATG 2 cut(s) 649, 948
BtsIMutI CAGTG 1 cut(s) 433
Cac8I GCNNGC 2 cut(s) 505, 799
CciI TCATGA 1 cut(s) 1084
CfoI GCGC 2 cut(s) 156, 1133
Cfr13I GGNCC 4 cut(s) 30, 366, 380, 1191
ClaI ATCGAT 1 cut(s) 1136
CsiI ACCWGGT 1 cut(s) 611
Csp6I GTAC 1 cut(s) 489
CviAII CATG 4 cut(s) 679, 1054, 1071, 1085
CviQI GTAC 1 cut(s) 489
DdeI CTNAG 3 cut(s) 296, 998, 1364
DpnI GATC 5 cut(s) 180, 195, 563, 582, 1241
DpnII GATC 5 cut(s) 178, 193, 561, 580, 1239
EaeI YGGCCR 2 cut(s) 112, 681
Eam1104I CTCTTC 1 cut(s) 593
EarI CTCTTC 1 cut(s) 593
Eco130I CCWWGG 1 cut(s) 115
Eco31I GGTCTC 3 cut(s) 294, 756, 1251
Eco47I GGWCC 1 cut(s) 30
Eco57I CTGAAG 1 cut(s) 617
Eco72I CACGTG 1 cut(s) 1202
Eco88I CYCGRG 2 cut(s) 21, 174
EcoO109I RGGNCCY 2 cut(s) 30, 1191
EcoRI GAATTC 1 cut(s) 452
EcoRII CCWGG 2 cut(s) 382, 611
EcoT14I CCWWGG 1 cut(s) 115
ErhI CCWWGG 1 cut(s) 115
FaeI CATG 4 cut(s) 682, 1057, 1074, 1088
FaqI GGGAC 2 cut(s) 16, 727
FatI CATG 4 cut(s) 678, 1053, 1070, 1084
Fnu4HI GCNGC 4 cut(s) 78, 323, 911, 1041
FokI GGATG 2 cut(s) 656, 935
Fsp4HI GCNGC 4 cut(s) 78, 323, 911, 1041
FspBI CTAG 4 cut(s) 35, 476, 518, 986
GlaI GCGC 2 cut(s) 155, 1132
GluI GCNGC 4 cut(s) 78, 323, 911, 1041
HaeIII GGCC 5 cut(s) 114, 368, 381, 683, 1193
HapII CCGG 2 cut(s) 402, 457
HhaI GCGC 2 cut(s) 156, 1133
Hin1II CATG 4 cut(s) 682, 1057, 1074, 1088
Hin6I GCGC 2 cut(s) 154, 1131
HinP1I GCGC 2 cut(s) 154, 1131
HincII GTYRAC 2 cut(s) 163, 618
HindII GTYRAC 2 cut(s) 163, 618
HinfI GANTC 4 cut(s) 49, 398, 731, 970
HpaI GTTAAC 1 cut(s) 163
HpaII CCGG 2 cut(s) 402, 457
HphI GGTGA 5 cut(s) 711, 1120, 1234, 1321, 1349
Hpy166II GTNNAC 3 cut(s) 163, 618, 1398
Hpy188I TCNGA 2 cut(s) 969, 999
Hpy8I GTNNAC 3 cut(s) 163, 618, 1398
Hpy99I CGWCG 1 cut(s) 1257
HpyAV CCTTC 3 cut(s) 222, 878, 1225
HpyCH4III ACNGT 3 cut(s) 124, 820, 1012
HpyCH4IV ACGT 8 cut(s) 349, 837, 890, 1092, 1201, 1209, 1288, 1400
HpyCH4V TGCA 6 cut(s) 77, 473, 507, 605, 877, 1043
HpyF10VI GCNNNNNNNGC 4 cut(s) 479, 536, 803, 982
HpyF3I CTNAG 3 cut(s) 296, 998, 1364
HpySE526I ACGT 8 cut(s) 349, 837, 890, 1092, 1201, 1209, 1288, 1400
Hsp92II CATG 4 cut(s) 682, 1057, 1074, 1088
HspAI GCGC 2 cut(s) 154, 1131
KflI GGGWCCC 1 cut(s) 30
KspAI GTTAAC 1 cut(s) 163
Kzo9I GATC 5 cut(s) 178, 193, 561, 580, 1239
LmnI GCTCC 4 cut(s) 87, 256, 745, 844
Lsp1109I GCAGC 4 cut(s) 89, 309, 897, 1027
LweI GCATC 4 cut(s) 490, 517, 767, 1142
MabI ACCWGGT 1 cut(s) 611
MaeI CTAG 4 cut(s) 35, 476, 518, 986
MaeII ACGT 8 cut(s) 349, 837, 890, 1092, 1201, 1209, 1288, 1400
MaeIII GTNAC 4 cut(s) 405, 728, 811, 1197
MalI GATC 5 cut(s) 180, 195, 563, 582, 1241
MboI GATC 5 cut(s) 178, 193, 561, 580, 1239
MboII GAAGA 8 cut(s) 82, 173, 401, 404, 407, 443, 610, 1346
MflI RGATCY 1 cut(s) 178
MhlI GDGCHC 4 cut(s) 261, 742, 1092, 1215
MlsI TGGCCA 1 cut(s) 114
MluNI TGGCCA 1 cut(s) 114
MlyI GAGTC 3 cut(s) 43, 392, 725
MmeI TCCRAC 1 cut(s) 383
Mox20I TGGCCA 1 cut(s) 114
MscI TGGCCA 1 cut(s) 114
MseI TTAA 5 cut(s) 39, 83, 162, 945, 1062
MslI CAYNNNNRTG 1 cut(s) 1393
Msp20I TGGCCA 1 cut(s) 114
MspI CCGG 2 cut(s) 402, 457
MspR9I CCNGG 4 cut(s) 384, 403, 458, 613
MvaI CCWGG 2 cut(s) 384, 613
MwoI GCNNNNNNNGC 4 cut(s) 479, 536, 803, 982
NciI CCSGG 2 cut(s) 403, 458
NdeII GATC 5 cut(s) 178, 193, 561, 580, 1239
NlaIII CATG 4 cut(s) 682, 1057, 1074, 1088
NlaIV GGNNCC 4 cut(s) 31, 32, 121, 1192
NmeAIII GCCGAG 2 cut(s) 182, 307
NmuCI GTSAC 2 cut(s) 728, 1197
PaeR7I CTCGAG 2 cut(s) 21, 174
PagI TCATGA 1 cut(s) 1084
PcsI WCGNNNNNNNCGW 1 cut(s) 1285
PfeI GAWTC 1 cut(s) 970
PkrI GCNGC 4 cut(s) 79, 324, 912, 1042
PleI GAGTC 3 cut(s) 43, 392, 725
PmaCI CACGTG 1 cut(s) 1202
PmlI CACGTG 1 cut(s) 1202
PpsI GAGTC 3 cut(s) 43, 392, 725
Ppu21I YACGTR 2 cut(s) 1093, 1202
PpuMI RGGWCCY 1 cut(s) 30
Psp5II RGGWCCY 1 cut(s) 30
Psp6I CCWGG 2 cut(s) 382, 611
PspCI CACGTG 1 cut(s) 1202
PspGI CCWGG 2 cut(s) 382, 611
PspN4I GGNNCC 4 cut(s) 31, 32, 121, 1192
PspPI GGNCC 4 cut(s) 30, 366, 380, 1191
PspPPI RGGWCCY 1 cut(s) 30
PsrI GAACNNNNNNTAC 4 cut(s) 804, 836, 1049, 1081
PstI CTGCAG 1 cut(s) 79
PsuI RGATCY 1 cut(s) 178
RsaI GTAC 1 cut(s) 490
RsaNI GTAC 1 cut(s) 489
RseI CAYNNNNRTG 1 cut(s) 1393
SaqAI TTAA 5 cut(s) 39, 83, 162, 945, 1062
SatI GCNGC 4 cut(s) 78, 323, 911, 1041
Sau3AI GATC 5 cut(s) 178, 193, 561, 580, 1239
Sau96I GGNCC 4 cut(s) 30, 366, 380, 1191
SchI GAGTC 3 cut(s) 43, 392, 725
ScrFI CCNGG 4 cut(s) 384, 403, 458, 613
SduI GDGCHC 4 cut(s) 261, 742, 1092, 1215
SexAI ACCWGGT 1 cut(s) 611
SfaNI GCATC 4 cut(s) 490, 517, 767, 1142
SfcI CTRYAG 1 cut(s) 75
Sfr274I CTCGAG 2 cut(s) 21, 174
SinI GGWCC 1 cut(s) 30
SlaI CTCGAG 2 cut(s) 21, 174
SmiMI CAYNNNNRTG 1 cut(s) 1393
SmlI CTYRAG 6 cut(s) 21, 51, 57, 174, 848, 860
SmoI CTYRAG 6 cut(s) 21, 51, 57, 174, 848, 860
SsiI CCGC 1 cut(s) 1205
SspI AATATT 1 cut(s) 1047
SspMI CTAG 4 cut(s) 35, 476, 518, 986
StyD4I CCNGG 4 cut(s) 382, 401, 456, 611
StyI CCWWGG 1 cut(s) 115
TaaI ACNGT 3 cut(s) 124, 820, 1012
TaiI ACGT 8 cut(s) 352, 840, 893, 1095, 1204, 1212, 1291, 1403
TaqI TCGA 6 cut(s) 22, 175, 1136, 1182, 1255, 1279
TatI WGTACW 1 cut(s) 488
TfiI GAWTC 1 cut(s) 970
Tru1I TTAA 5 cut(s) 39, 83, 162, 945, 1062
Tru9I TTAA 5 cut(s) 39, 83, 162, 945, 1062
TscAI CASTG 1 cut(s) 433
TseFI GTSAC 2 cut(s) 728, 1197
TseI GCWGC 4 cut(s) 77, 322, 910, 1040
Tsp45I GTSAC 2 cut(s) 728, 1197
TspDTI ATGAA 4 cut(s) 87, 660, 1070, 1150
TspRI CASTG 1 cut(s) 433
VpaK11BI GGWCC 1 cut(s) 30
XapI RAATTY 1 cut(s) 452
XhoI CTCGAG 2 cut(s) 21, 174
XspI CTAG 4 cut(s) 35, 476, 518, 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.