RchiOBHm_Chr4g0389661

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
4608848 .. 4612984
4137 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36279

Sequence Viewer

Length: 1209 bp
ATGACTCGAGGAGGAGGAGGAGGAGGAGACGGGGAAGCCGTTGCGGCGGTGGCGGTGGTGGACCCTCAGGCGGTGGTGGCGGTGAAGAAGAAGTCGTCTCGGAGCTGGGTTTTGCTGGACGCGACGGGACAAGCGACGGTGTTGGATGTGGACAAGTATGCGATCATGCACAGAGTCCACATTCACGCTCGGGATCTCCGCATTGTCGACCCTCTGCTCTCTTACCCTTCCGCCATTCTCGGACGTGACAGGGCTATTGTTCTCAATCTGGAGCATATTAAAGCGATAATTACTGCTGAAGAGGTGCTGCTTCGGGATCCGTTGGATGAAAATGTTATTCCTGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTTAATTCCAATCGTGAAAATCAAACAGATGGAAGAGAGTTCCCTGCTGGGCACAATGATGTTGACGCTGGTGAAGAAGATGAGTCTCCATTTGAATTCCGGGCCTTGGAGGTAGCCTTGGAAGCAATTTGTAGTTTTCTTGCTGCACGTACAACAGAACTGGAGACTGCTGCTTATCCGGCTCTAGATGAGCTTACCTCTAAGATTAGTAGTCGCAATTTGGATAGGGTTCGTAAATTGAAAAGTGCAATGACAAGGTTGACTGCACGGGTCCAAAAGGTGAGGGATGAGCTCGAGCAGCTGCTGGATGATGATGATGATATGGCCGACCTTTACTTGTCAAGAAAGTTGGTGGGTGCATGTTCACCAGTTAGTGCCTCTGGTCCTCCCAATTGGTATCCTGCCTCCCCTACCATAGGCTCAAAAATATCACGGGCAAGTAGAGCAAGTATGATAACTGTTCGTGGAGATGAGAATGACGTTGAGGAACTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGCACCTTGAACAAGTTAGCTACGCTGCGTGAATATATTGATGATACGGAGGATTACATAAATATTCAGCTTGATAACCATAGGAATCAGTTAATTCAGCTTGAGCTTTTTCTTAGTTCTGGAACTGTTAGCTTATCCGTATATTCTTTGGTGGCTGGAATTTTTGGCATGAATATCCCATATACGTGGAACGATGGTCATGGATACATGTTTAAATGGGTTTGCATTGTCACCGGAATAGTATGTTTCTTTGTTTTCATAGTAATTGTAGCATATGCTCGCCACAAAGGGTTGGTTGGATCGTGA

Protein Analysis

402

Amino Acids

44.46

Weight (kDa)

4.93

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 39 - 241 1.2e-26 Magnesium transporter MRS2-like
MRS2-like PF22099 282 - 329 6.6e-08 Magnesium transporter MRS2-like
CorA PF01544 290 - 390 8.8e-08 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 905
AccI GTMKAC 1 cut(s) 207
AccII CGCG 1 cut(s) 122
AciI CCGC 7 cut(s) 44, 47, 53, 71, 80, 199, 231
AclWI GGATC 3 cut(s) 201, 311, 324
AcoI YGGCCR 1 cut(s) 699
AcsI RAATTY 2 cut(s) 470, 1062
AcuI CTGAAG 1 cut(s) 318
AfaI GTAC 1 cut(s) 526
AfiI CCNNNNNNNGG 3 cut(s) 70, 481, 791
AflIII ACRYGT 1 cut(s) 1110
AgsI TTSAA 6 cut(s) 350, 359, 470, 616, 869, 913
AjiI CACGTC 1 cut(s) 245
Alw21I GWGCWC 1 cut(s) 669
Alw26I GTCTC 4 cut(s) 21, 102, 465, 533
AlwI GGATC 3 cut(s) 201, 311, 324
AlwNI CAGNNNCTG 1 cut(s) 679
Ama87I CYCGRG 3 cut(s) 6, 189, 668
AoxI GGCC 2 cut(s) 477, 699
ApeKI GCWGC 6 cut(s) 307, 518, 545, 673, 676, 928
ApoI RAATTY 2 cut(s) 470, 1062
Asp700I GAANNNNTTC 1 cut(s) 354
AspS9I GGNCC 4 cut(s) 61, 477, 646, 758
AsuC2I CCSGG 1 cut(s) 476
AsuHPI GGTGA 5 cut(s) 94, 458, 667, 732, 1126
AvaI CYCGRG 3 cut(s) 6, 189, 668
AvaII GGWCC 3 cut(s) 61, 646, 758
AxyI CCTNAGG 1 cut(s) 66
BaeGI GKGCMC 1 cut(s) 429
BamHI GGATCC 1 cut(s) 316
BanI GGYRCC 1 cut(s) 905
BanII GRGCYC 1 cut(s) 669
Bbv12I GWGCWC 1 cut(s) 669
BbvI GCAGC 6 cut(s) 294, 505, 532, 663, 685, 915
BccI CCATC 3 cut(s) 398, 896, 1091
BceAI ACGGC 1 cut(s) 23
BciVI GTATCC 2 cut(s) 783, 1100
BcnI CCSGG 1 cut(s) 476
BcoDI GTCTC 4 cut(s) 21, 102, 465, 533
BfaI CTAG 1 cut(s) 560
BfuI GTATCC 2 cut(s) 783, 1100
BglI GCCNNNNNGGC 1 cut(s) 44
BisI GCNGC 7 cut(s) 45, 308, 519, 546, 674, 677, 929
BlsI GCNGC 7 cut(s) 46, 309, 520, 547, 675, 678, 930
Bme1390I CCNGG 1 cut(s) 476
Bme18I GGWCC 3 cut(s) 61, 646, 758
BmeT110I CYCGRG 3 cut(s) 6, 189, 668
BmgBI CACGTC 1 cut(s) 245
BmgT120I GGNCC 4 cut(s) 61, 477, 646, 758
BmiI GGNNCC 4 cut(s) 63, 318, 647, 907
BmrFI CCNGG 1 cut(s) 476
BplI GAGNNNNNCTC 2 cut(s) 557, 589
BpmI CTGGAG 3 cut(s) 290, 557, 899
BpuEI CTTGAG 1 cut(s) 1025
BpuMI CCSGG 1 cut(s) 476
BsaAI YACGTR 2 cut(s) 524, 1089
BsaJI CCNNGG 2 cut(s) 480, 492
BsaWI WCCGGW 1 cut(s) 1136
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 481, 791
Bse1I ACTGG 3 cut(s) 540, 743, 882
Bse21I CCTNAGG 1 cut(s) 66
Bse3DI GCAATG 1 cut(s) 630
BseDI CCNNGG 2 cut(s) 480, 492
BseGI GGATG 4 cut(s) 151, 331, 667, 688
BseLI CCNNNNNNNGG 3 cut(s) 70, 481, 791
BseMI GCAATG 1 cut(s) 630
BseMII CTCAG 1 cut(s) 80
BseNI ACTGG 3 cut(s) 540, 743, 882
BseRI GAGGAG 6 cut(s) 24, 27, 30, 33, 36, 39
BseSI GKGCMC 1 cut(s) 429
BseXI GCAGC 6 cut(s) 294, 505, 532, 663, 685, 915
BseYI CCCAGC 2 cut(s) 105, 422
BsgI GTGCAG 2 cut(s) 504, 624
Bsh1236I CGCG 1 cut(s) 122
BshFI GGCC 2 cut(s) 479, 701
BshNI GGYRCC 1 cut(s) 905
BsiHKAI GWGCWC 1 cut(s) 669
BsiHKCI CYCGRG 3 cut(s) 6, 189, 668
BsiSI CCGG 3 cut(s) 475, 554, 1137
BslFI GGGAC 1 cut(s) 141
BslI CCNNNNNNNGG 3 cut(s) 70, 481, 791
BsmAI GTCTC 4 cut(s) 21, 102, 465, 533
BsmBI CGTCTC 2 cut(s) 21, 102
BsmFI GGGAC 1 cut(s) 141
BsnI GGCC 2 cut(s) 479, 701
BsoBI CYCGRG 3 cut(s) 6, 189, 668
Bsp1286I GDGCHC 2 cut(s) 429, 669
Bsp143I GATC 4 cut(s) 162, 193, 316, 1202
BspACI CCGC 7 cut(s) 44, 47, 53, 71, 80, 199, 231
BspANI GGCC 2 cut(s) 479, 701
BspCNI CTCAG 1 cut(s) 79
BspFNI CGCG 1 cut(s) 122
BspLI GGNNCC 4 cut(s) 63, 318, 647, 907
BspPI GGATC 3 cut(s) 201, 311, 324
BspQI GCTCTTC 1 cut(s) 345
BspT107I GGYRCC 1 cut(s) 905
BsrDI GCAATG 1 cut(s) 630
BsrI ACTGG 3 cut(s) 540, 743, 882
BssECI CCNNGG 2 cut(s) 480, 492
BssMI GATC 4 cut(s) 162, 193, 316, 1202
BssT1I CCWWGG 2 cut(s) 480, 492
Bst4CI ACNGT 4 cut(s) 139, 366, 835, 1030
Bst6I CTCTTC 3 cut(s) 294, 345, 403
BstBAI YACGTR 2 cut(s) 524, 1089
BstC8I GCNNGC 1 cut(s) 1183
BstDEI CTNAG 3 cut(s) 66, 576, 1016
BstENI CCTNNNNNAGG 1 cut(s) 789
BstF5I GGATG 4 cut(s) 151, 331, 667, 688
BstFNI CGCG 1 cut(s) 122
BstKTI GATC 4 cut(s) 165, 196, 319, 1205
BstMAI GTCTC 4 cut(s) 21, 102, 465, 533
BstMBI GATC 4 cut(s) 162, 193, 316, 1202
BstMWI GCNNNNNNNGC 7 cut(s) 44, 50, 77, 497, 554, 673, 818
BstNSI RCATGY 2 cut(s) 738, 1114
BstSCI CCNGG 1 cut(s) 474
BstSLI GKGCMC 1 cut(s) 429
BstUI CGCG 1 cut(s) 122
BstV1I GCAGC 6 cut(s) 294, 505, 532, 663, 685, 915
BstX2I RGATCY 2 cut(s) 193, 316
BstXI CCANNNNNNTGG 1 cut(s) 1089
BstYI RGATCY 2 cut(s) 193, 316
Bsu36I CCTNAGG 1 cut(s) 66
BsuI GTATCC 2 cut(s) 783, 1100
BsuRI GGCC 2 cut(s) 479, 701
BtrI CACGTC 1 cut(s) 245
BtsCI GGATG 4 cut(s) 151, 331, 667, 688
Cac8I GCNNGC 1 cut(s) 1183
CaiI CAGNNNCTG 1 cut(s) 679
Cfr13I GGNCC 4 cut(s) 61, 477, 646, 758
CseI GACGC 2 cut(s) 128, 449
Csp6I GTAC 1 cut(s) 525
CviAII CATG 5 cut(s) 166, 735, 1072, 1103, 1111
CviQI GTAC 1 cut(s) 525
DdeI CTNAG 3 cut(s) 66, 576, 1016
DpnI GATC 4 cut(s) 164, 195, 318, 1204
DpnII GATC 4 cut(s) 162, 193, 316, 1202
DraI TTTAAA 1 cut(s) 1117
EaeI YGGCCR 1 cut(s) 699
Eam1104I CTCTTC 3 cut(s) 294, 345, 403
EarI CTCTTC 3 cut(s) 294, 345, 403
EciI GGCGGA 1 cut(s) 220
Ecl136II GAGCTC 1 cut(s) 667
Eco130I CCWWGG 2 cut(s) 480, 492
Eco24I GRGCYC 1 cut(s) 669
Eco47I GGWCC 3 cut(s) 61, 646, 758
Eco53kI GAGCTC 1 cut(s) 667
Eco57I CTGAAG 1 cut(s) 318
Eco81I CCTNAGG 1 cut(s) 66
Eco88I CYCGRG 3 cut(s) 6, 189, 668
EcoICRI GAGCTC 1 cut(s) 667
EcoNI CCTNNNNNAGG 1 cut(s) 789
EcoRI GAATTC 1 cut(s) 470
EcoT14I CCWWGG 2 cut(s) 480, 492
EcoT38I GRGCYC 1 cut(s) 669
ErhI CCWWGG 2 cut(s) 480, 492
Esp3I CGTCTC 2 cut(s) 21, 102
FaeI CATG 5 cut(s) 169, 738, 1075, 1106, 1114
FaqI GGGAC 1 cut(s) 141
FatI CATG 5 cut(s) 165, 734, 1071, 1102, 1110
FauNDI CATATG 1 cut(s) 1177
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 7 cut(s) 45, 308, 519, 546, 674, 677, 929
FokI GGATG 4 cut(s) 158, 338, 674, 695
FriOI GRGCYC 1 cut(s) 669
Fsp4HI GCNGC 7 cut(s) 45, 308, 519, 546, 674, 677, 929
FspBI CTAG 1 cut(s) 560
GluI GCNGC 7 cut(s) 45, 308, 519, 546, 674, 677, 929
GsaI CCCAGC 2 cut(s) 109, 426
GsuI CTGGAG 3 cut(s) 290, 557, 899
HaeIII GGCC 2 cut(s) 479, 701
HapII CCGG 3 cut(s) 475, 554, 1137
HgaI GACGC 2 cut(s) 128, 449
Hin1II CATG 5 cut(s) 169, 738, 1075, 1106, 1114
HincII GTYRAC 3 cut(s) 208, 439, 636
HindII GTYRAC 3 cut(s) 208, 439, 636
HinfI GANTC 4 cut(s) 4, 174, 458, 988
HpaII CCGG 3 cut(s) 475, 554, 1137
HphI GGTGA 5 cut(s) 94, 458, 667, 732, 1126
Hpy166II GTNNAC 7 cut(s) 61, 151, 178, 208, 439, 636, 740
Hpy188I TCNGA 2 cut(s) 102, 242
Hpy188III TCNNGA 8 cut(s) 191, 269, 314, 389, 560, 717, 1023, 1206
Hpy8I GTNNAC 7 cut(s) 61, 151, 178, 208, 439, 636, 740
Hpy99I CGWCG 2 cut(s) 127, 139
HpyAV CCTTC 1 cut(s) 237
HpyCH4III ACNGT 4 cut(s) 139, 366, 835, 1030
HpyCH4IV ACGT 4 cut(s) 244, 523, 855, 1088
HpyCH4V TGCA 7 cut(s) 169, 521, 623, 641, 734, 895, 1128
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 50, 77, 497, 554, 673, 818
HpyF3I CTNAG 3 cut(s) 66, 576, 1016
HpySE526I ACGT 4 cut(s) 244, 523, 855, 1088
Hsp92II CATG 5 cut(s) 169, 738, 1075, 1106, 1114
Kzo9I GATC 4 cut(s) 162, 193, 316, 1202
LguI GCTCTTC 1 cut(s) 345
LmnI GCTCC 2 cut(s) 102, 271
Lsp1109I GCAGC 6 cut(s) 294, 505, 532, 663, 685, 915
MaeI CTAG 1 cut(s) 560
MaeII ACGT 4 cut(s) 244, 523, 855, 1088
MaeIII GTNAC 3 cut(s) 245, 873, 1132
MalI GATC 4 cut(s) 164, 195, 318, 1204
MboI GATC 4 cut(s) 162, 193, 316, 1202
MboII GAAGA 7 cut(s) 97, 100, 311, 362, 420, 461, 464
MfeI CAATTG 1 cut(s) 766
MflI RGATCY 2 cut(s) 193, 316
MhlI GDGCHC 2 cut(s) 429, 669
MlyI GAGTC 2 cut(s) 183, 467
MmeI TCCRAC 3 cut(s) 123, 303, 1180
MroXI GAANNNNTTC 1 cut(s) 354
MseI TTAA 4 cut(s) 279, 378, 995, 1116
MslI CAYNNNNRTG 2 cut(s) 432, 1087
MspA1I CMGCKG 1 cut(s) 676
MspI CCGG 3 cut(s) 475, 554, 1137
MspR9I CCNGG 1 cut(s) 476
MunI CAATTG 1 cut(s) 766
MvnI CGCG 1 cut(s) 122
MwoI GCNNNNNNNGC 7 cut(s) 44, 50, 77, 497, 554, 673, 818
NciI CCSGG 1 cut(s) 476
NdeI CATATG 1 cut(s) 1177
NdeII GATC 4 cut(s) 162, 193, 316, 1202
NlaIII CATG 5 cut(s) 169, 738, 1075, 1106, 1114
NlaIV GGNNCC 4 cut(s) 63, 318, 647, 907
NmuCI GTSAC 2 cut(s) 245, 1132
NspI RCATGY 2 cut(s) 738, 1114
PaeR7I CTCGAG 2 cut(s) 6, 668
PciI ACATGT 1 cut(s) 1110
PciSI GCTCTTC 1 cut(s) 345
PcsI WCGNNNNNNNCGW 2 cut(s) 36, 131
PdmI GAANNNNTTC 1 cut(s) 354
PfeI GAWTC 1 cut(s) 988
PkrI GCNGC 7 cut(s) 46, 309, 520, 547, 675, 678, 930
PleI GAGTC 2 cut(s) 182, 466
PpsI GAGTC 2 cut(s) 182, 466
Ppu21I YACGTR 2 cut(s) 524, 1089
PscI ACATGT 1 cut(s) 1110
Psp124BI GAGCTC 1 cut(s) 669
PspFI CCCAGC 2 cut(s) 105, 422
PspN4I GGNNCC 4 cut(s) 63, 318, 647, 907
PspPI GGNCC 4 cut(s) 61, 477, 646, 758
PspXI VCTCGAGB 2 cut(s) 6, 668
PstNI CAGNNNCTG 1 cut(s) 679
PsuI RGATCY 2 cut(s) 193, 316
PvuII CAGCTG 1 cut(s) 676
RsaI GTAC 1 cut(s) 526
RsaNI GTAC 1 cut(s) 525
RseI CAYNNNNRTG 2 cut(s) 432, 1087
SacI GAGCTC 1 cut(s) 669
SalI GTCGAC 1 cut(s) 206
SapI GCTCTTC 1 cut(s) 345
SaqAI TTAA 4 cut(s) 279, 378, 995, 1116
SatI GCNGC 7 cut(s) 45, 308, 519, 546, 674, 677, 929
Sau3AI GATC 4 cut(s) 162, 193, 316, 1202
Sau96I GGNCC 4 cut(s) 61, 477, 646, 758
SchI GAGTC 2 cut(s) 183, 467
ScrFI CCNGG 1 cut(s) 476
SduI GDGCHC 2 cut(s) 429, 669
Sfr274I CTCGAG 2 cut(s) 6, 668
SinI GGWCC 3 cut(s) 61, 646, 758
SlaI CTCGAG 2 cut(s) 6, 668
SmiMI CAYNNNNRTG 2 cut(s) 432, 1087
SmlI CTYRAG 3 cut(s) 6, 668, 1004
SmoI CTYRAG 3 cut(s) 6, 668, 1004
SsiI CCGC 7 cut(s) 44, 47, 53, 71, 80, 199, 231
SspI AATATT 1 cut(s) 967
SspMI CTAG 1 cut(s) 560
SstI GAGCTC 1 cut(s) 669
StyD4I CCNGG 1 cut(s) 474
StyI CCWWGG 2 cut(s) 480, 492
TaaI ACNGT 4 cut(s) 139, 366, 835, 1030
TaiI ACGT 4 cut(s) 247, 526, 858, 1091
TaqI TCGA 3 cut(s) 7, 207, 669
TauI GCSGC 1 cut(s) 47
TfiI GAWTC 1 cut(s) 988
Tru1I TTAA 4 cut(s) 279, 378, 995, 1116
Tru9I TTAA 4 cut(s) 279, 378, 995, 1116
TseFI GTSAC 2 cut(s) 245, 1132
TseI GCWGC 6 cut(s) 307, 518, 545, 673, 676, 928
Tsp45I GTSAC 2 cut(s) 245, 1132
TspDTI ATGAA 3 cut(s) 342, 1088, 1150
TspGWI ACGGA 3 cut(s) 309, 965, 1030
VpaK11BI GGWCC 3 cut(s) 61, 646, 758
XagI CCTNNNNNAGG 1 cut(s) 789
XapI RAATTY 2 cut(s) 470, 1062
XbaI TCTAGA 1 cut(s) 559
XceI RCATGY 2 cut(s) 738, 1114
XhoI CTCGAG 2 cut(s) 6, 668
XmiI GTMKAC 1 cut(s) 207
XmnI GAANNNNTTC 1 cut(s) 354
XspI CTAG 1 cut(s) 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.