MD10G1191900.v1.1

Magnesium transporter MRS2-I-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
28842931 .. 28846212
3282 bp
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UTR
Exon/CDS
Intron
MD10G1191900.v1.1.491

Sequence Viewer

Length: 1224 bp
ATGTGCGCTCTGGAAATGGCCCGAGATGGGCTGCTGGTCCCGGCGGCGGCGGAGACTGCTCAGACGCAAGCTCAAGCCTCTGCCGCTGCCAAGAAGAAGACTACATCTTTGAGAAGCTGGATTTCGCTGGACCACGACGGGCAGGGAACTGTTTTGGATTTGGACAAGCACGCCATTATCCGCCGAGTTCAGATTCACGCTCGAGATCTTCGGCTTCTCGATCCATTGTTATCGTATCCGTCTACAATCTTGGGCAGAGAGAAAGTCATTGTTCTTAATTTGGAGCACATCAAAGCAATAATCACAGCGGATGAGGTATTGCTTAGAGACCCACTTGATGATAATGTACTACCTATTGTTGAGGAACTTCAAAGACGCTTGCCTCCATCAAGCGCCAATTTCAATGGCCAAGGAGAAGAAGAAGATGCTTCTGGGGTACAAAAAGATGGCGAAATCGATGACGAAAATGAATTCCCATTCGAATTCCGAGCTTTAGAAGTTGCACTAGAAGGTATTTGTAGTTTTCTTGATGCGCAGACTAGACAACTTGAGGCTGCTGCTTATCCGGCTTTAGATGAGCTGACCTCAAAGATTAGCAGTCGTAATTTGGATCGTGTGCGTAAGTTGAAGAGTGCAATGACCAGGTTGACGAATAGGGTTCAAAAGGTAAGAGATGAACTCGAACAACTTCTTGATGACGATGATGACATGGCAGACCTTTACTTATCAAGAAAGATGGTCGGGACTTCACCTATCAGCGACTCTGGTGCTCCAAATTGGTCTCTCGCCTCACCTACTATAACTATAGGGTCAAAGGTATCCAGAACAAGCAGGGCGAGTGCAGCAACAACGGTTGAAGAGGAGAATGATGTCGAGGAACTTGAAATGTTGCTCGAGGCTTACTTTATGCAAATTGATGGTACATTGAATAAATTGACAACGCTGCGCGAATACATCGATGACACAGAGGATTACATTAATATCCAGCTTGACAATCATCGGAATCAGCTAATTCAGCTAGAGCTGTTCCTAAGTTCTGGAACTGTTTGTTTGTCTATGTGTTCTTTGGTGGCCGCAATTTTTGGCATGAACATCCCGTATACTTGGAACGATGGTCATGAATACGTATTCAAATGGGTGATCATCGTCACGGGGATGGTTTGCGCCTCCCTTTTCTTGTTGATAATGTCGTATGCTCAGCACAAAGGTCTCGTTGGATCTTGA

Protein Analysis

408

Amino Acids

45.3

Weight (kDa)

4.66

Isoelectric Point (pI)

36.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MRS2-like PF22099 52 - 246 4.2e-27 Magnesium transporter MRS2-like
MRS2-like PF22099 286 - 334 7.1e-08 Magnesium transporter MRS2-like
CorA PF01544 293 - 394 5.6e-07 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 534
AccI GTMKAC 2 cut(s) 242, 1100
AccII CGCG 1 cut(s) 948
AciI CCGC 7 cut(s) 44, 47, 50, 84, 181, 308, 1074
AclWI GGATC 2 cut(s) 215, 618
AcoI YGGCCR 2 cut(s) 406, 1071
AcsI RAATTY 2 cut(s) 470, 482
AfaI GTAC 3 cut(s) 348, 438, 922
AfiI CCNNNNNNNGG 2 cut(s) 27, 46
AgsI TTSAA 8 cut(s) 371, 403, 628, 662, 857, 884, 928, 1132
AjnI CCWGG 1 cut(s) 641
AluBI AGCT 8 cut(s) 71, 117, 491, 580, 988, 1009, 1018, 1024
AluI AGCT 8 cut(s) 71, 117, 491, 580, 988, 1009, 1018, 1024
Alw21I GWGCWC 2 cut(s) 288, 772
Alw26I GTCTC 4 cut(s) 47, 321, 786, 1214
AlwI GGATC 2 cut(s) 215, 618
Ama87I CYCGRG 3 cut(s) 21, 201, 893
AoxI GGCC 3 cut(s) 18, 406, 1071
ApeKI GCWGC 6 cut(s) 31, 86, 554, 557, 842, 943
ApoI RAATTY 2 cut(s) 470, 482
ArsI GACNNNNNNTTYG 2 cut(s) 91, 123
AseI ATTAAT 1 cut(s) 978
Asp700I GAANNNNTTC 1 cut(s) 687
AspLEI GCGC 5 cut(s) 8, 395, 535, 948, 1166
AspS9I GGNCC 3 cut(s) 19, 37, 130
AsuC2I CCSGG 1 cut(s) 41
AsuHPI GGTGA 3 cut(s) 741, 783, 1150
AsuII TTCGAA 1 cut(s) 480
AvaI CYCGRG 3 cut(s) 21, 201, 893
AvaII GGWCC 2 cut(s) 37, 130
BalI TGGCCA 1 cut(s) 408
BbsI GAAGAC 1 cut(s) 104
Bbv12I GWGCWC 2 cut(s) 288, 772
BbvI GCAGC 6 cut(s) 18, 73, 541, 544, 854, 930
BccI CCATC 7 cut(s) 20, 394, 440, 730, 911, 1106, 1150
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 1 cut(s) 643
BciVI GTATCC 2 cut(s) 246, 829
BclI TGATCA 1 cut(s) 1140
BcnI CCSGG 1 cut(s) 41
BcoDI GTCTC 4 cut(s) 47, 321, 786, 1214
BfaI CTAG 3 cut(s) 506, 540, 1019
BfmI CTRYAG 1 cut(s) 804
BfoI RGCGCY 1 cut(s) 396
BfuI GTATCC 2 cut(s) 246, 829
BglII AGATCT 1 cut(s) 205
BlpI GCTNAGC 1 cut(s) 1197
Bme1390I CCNGG 2 cut(s) 41, 643
Bme18I GGWCC 2 cut(s) 37, 130
BmeT110I CYCGRG 3 cut(s) 21, 201, 893
BmgT120I GGNCC 3 cut(s) 19, 37, 130
BmiI GGNNCC 1 cut(s) 39
BmrFI CCNGG 2 cut(s) 41, 643
BmsI GCATC 2 cut(s) 415, 520
BpiI GAAGAC 1 cut(s) 104
BplI GAGNNNNNCTC 4 cut(s) 569, 601, 663, 695
Bpu1102I GCTNAGC 1 cut(s) 1197
Bpu14I TTCGAA 1 cut(s) 480
BpuEI CTTGAG 2 cut(s) 57, 569
BpuMI CCSGG 1 cut(s) 41
Bsa29I ATCGAT 2 cut(s) 456, 957
BsaAI YACGTR 1 cut(s) 1126
BsaI GGTCTC 3 cut(s) 321, 786, 1214
BsaJI CCNNGG 1 cut(s) 409
Bsc4I CCNNNNNNNGG 2 cut(s) 27, 46
Bse3DI GCAATG 1 cut(s) 642
BseBI CCWGG 1 cut(s) 643
BseCI ATCGAT 2 cut(s) 456, 957
BseDI CCNNGG 1 cut(s) 409
BseGI GGATG 3 cut(s) 316, 1092, 1161
BseLI CCNNNNNNNGG 2 cut(s) 27, 46
BseMI GCAATG 1 cut(s) 642
BseMII CTCAG 2 cut(s) 74, 1211
BseRI GAGGAG 1 cut(s) 875
BseXI GCAGC 6 cut(s) 18, 73, 541, 544, 854, 930
BsgI GTGCAG 1 cut(s) 861
Bsh1236I CGCG 1 cut(s) 948
BshFI GGCC 3 cut(s) 20, 408, 1073
BshVI ATCGAT 2 cut(s) 456, 957
BsiHKAI GWGCWC 2 cut(s) 288, 772
BsiHKCI CYCGRG 3 cut(s) 21, 201, 893
BsiSI CCGG 2 cut(s) 41, 566
BslFI GGGAC 2 cut(s) 23, 757
BslI CCNNNNNNNGG 2 cut(s) 27, 46
BsmAI GTCTC 4 cut(s) 47, 321, 786, 1214
BsmFI GGGAC 2 cut(s) 23, 757
BsnI GGCC 3 cut(s) 20, 408, 1073
Bso31I GGTCTC 3 cut(s) 321, 786, 1214
BsoBI CYCGRG 3 cut(s) 21, 201, 893
Bsp119I TTCGAA 1 cut(s) 480
Bsp1286I GDGCHC 2 cut(s) 288, 772
Bsp143I GATC 5 cut(s) 205, 220, 610, 1140, 1217
Bsp1720I GCTNAGC 1 cut(s) 1197
BspACI CCGC 7 cut(s) 44, 47, 50, 84, 181, 308, 1074
BspANI GGCC 3 cut(s) 20, 408, 1073
BspCNI CTCAG 2 cut(s) 73, 1210
BspDI ATCGAT 2 cut(s) 456, 957
BspFNI CGCG 1 cut(s) 948
BspHI TCATGA 1 cut(s) 1117
BspLI GGNNCC 1 cut(s) 39
BspPI GGATC 2 cut(s) 215, 618
BspT104I TTCGAA 1 cut(s) 480
BspTNI GGTCTC 3 cut(s) 321, 786, 1214
BsrDI GCAATG 1 cut(s) 642
BssECI CCNNGG 1 cut(s) 409
BssMI GATC 5 cut(s) 205, 220, 610, 1140, 1217
BssNAI GTATAC 1 cut(s) 1101
BssT1I CCWWGG 1 cut(s) 409
Bst1107I GTATAC 1 cut(s) 1101
Bst2UI CCWGG 1 cut(s) 643
Bst4CI ACNGT 3 cut(s) 151, 853, 1045
Bst6I CTCTTC 2 cut(s) 623, 852
BstBAI YACGTR 1 cut(s) 1126
BstBI TTCGAA 1 cut(s) 480
BstC8I GCNNGC 3 cut(s) 69, 171, 380
BstDEI CTNAG 4 cut(s) 60, 323, 1031, 1197
BstF5I GGATG 3 cut(s) 316, 1092, 1161
BstFNI CGCG 1 cut(s) 948
BstH2I RGCGCY 1 cut(s) 396
BstHHI GCGC 5 cut(s) 8, 395, 535, 948, 1166
BstKTI GATC 5 cut(s) 208, 223, 613, 1143, 1220
BstMAI GTCTC 4 cut(s) 47, 321, 786, 1214
BstMBI GATC 5 cut(s) 205, 220, 610, 1140, 1217
BstMWI GCNNNNNNNGC 5 cut(s) 56, 83, 566, 842, 1015
BstNI CCWGG 1 cut(s) 643
BstSCI CCNGG 2 cut(s) 39, 641
BstSFI CTRYAG 1 cut(s) 804
BstSNI TACGTA 1 cut(s) 1126
BstUI CGCG 1 cut(s) 948
BstV1I GCAGC 6 cut(s) 18, 73, 541, 544, 854, 930
BstV2I GAAGAC 1 cut(s) 104
BstX2I RGATCY 2 cut(s) 205, 1217
BstYI RGATCY 2 cut(s) 205, 1217
BstZ17I GTATAC 1 cut(s) 1101
Bsu15I ATCGAT 2 cut(s) 456, 957
BsuI GTATCC 2 cut(s) 246, 829
BsuRI GGCC 3 cut(s) 20, 408, 1073
BsuTUI ATCGAT 2 cut(s) 456, 957
BtsCI GGATG 3 cut(s) 316, 1092, 1161
Cac8I GCNNGC 3 cut(s) 69, 171, 380
CciI TCATGA 1 cut(s) 1117
CfoI GCGC 5 cut(s) 8, 395, 535, 948, 1166
Cfr13I GGNCC 3 cut(s) 19, 37, 130
ClaI ATCGAT 2 cut(s) 456, 957
CseI GACGC 2 cut(s) 73, 384
CsiI ACCWGGT 1 cut(s) 641
Csp6I GTAC 3 cut(s) 347, 437, 921
CviAII CATG 3 cut(s) 709, 1087, 1118
CviQI GTAC 3 cut(s) 347, 437, 921
DdeI CTNAG 4 cut(s) 60, 323, 1031, 1197
DpnI GATC 5 cut(s) 207, 222, 612, 1142, 1219
DpnII GATC 5 cut(s) 205, 220, 610, 1140, 1217
EaeI YGGCCR 2 cut(s) 406, 1071
Eam1104I CTCTTC 2 cut(s) 623, 852
EarI CTCTTC 2 cut(s) 623, 852
EciI GGCGGA 2 cut(s) 65, 170
Eco105I TACGTA 1 cut(s) 1126
Eco130I CCWWGG 1 cut(s) 409
Eco31I GGTCTC 3 cut(s) 321, 786, 1214
Eco47I GGWCC 2 cut(s) 37, 130
Eco88I CYCGRG 3 cut(s) 21, 201, 893
EcoRI GAATTC 2 cut(s) 470, 482
EcoRII CCWGG 1 cut(s) 641
EcoT14I CCWWGG 1 cut(s) 409
ErhI CCWWGG 1 cut(s) 409
FaeI CATG 3 cut(s) 712, 1090, 1121
FaiI YATR 9 cut(s) 710, 800, 806, 908, 1058, 1088, 1101, 1119, 1194
FaqI GGGAC 2 cut(s) 23, 757
FatI CATG 3 cut(s) 708, 1086, 1117
FbaI TGATCA 1 cut(s) 1140
FblI GTMKAC 2 cut(s) 242, 1100
FokI GGATG 3 cut(s) 323, 1079, 1168
FspBI CTAG 3 cut(s) 506, 540, 1019
FspI TGCGCA 1 cut(s) 534
GlaI GCGC 5 cut(s) 7, 394, 534, 947, 1165
HaeII RGCGCY 1 cut(s) 396
HaeIII GGCC 3 cut(s) 20, 408, 1073
HapII CCGG 2 cut(s) 41, 566
HgaI GACGC 2 cut(s) 73, 384
HhaI GCGC 5 cut(s) 8, 395, 535, 948, 1166
Hin1II CATG 3 cut(s) 712, 1090, 1121
Hin6I GCGC 5 cut(s) 6, 393, 533, 946, 1164
HinP1I GCGC 5 cut(s) 6, 393, 533, 946, 1164
HincII GTYRAC 1 cut(s) 648
HindII GTYRAC 1 cut(s) 648
HinfI GANTC 3 cut(s) 193, 761, 1003
HpaII CCGG 2 cut(s) 41, 566
HphI GGTGA 3 cut(s) 741, 783, 1150
Hpy166II GTNNAC 3 cut(s) 243, 648, 1101
Hpy188I TCNGA 4 cut(s) 63, 192, 488, 1002
Hpy8I GTNNAC 3 cut(s) 243, 648, 1101
Hpy99I CGWCG 1 cut(s) 140
HpyAV CCTTC 1 cut(s) 503
HpyCH4III ACNGT 3 cut(s) 151, 853, 1045
HpyCH4IV ACGT 1 cut(s) 1125
HpyCH4V TGCA 4 cut(s) 503, 635, 842, 910
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 83, 566, 842, 1015
HpyF3I CTNAG 4 cut(s) 60, 323, 1031, 1197
HpySE526I ACGT 1 cut(s) 1125
Hsp92II CATG 3 cut(s) 712, 1090, 1121
HspAI GCGC 5 cut(s) 6, 393, 533, 946, 1164
Ksp22I TGATCA 1 cut(s) 1140
Kzo9I GATC 5 cut(s) 205, 220, 610, 1140, 1217
LmnI GCTCC 2 cut(s) 283, 775
Lsp1109I GCAGC 6 cut(s) 18, 73, 541, 544, 854, 930
LweI GCATC 2 cut(s) 415, 520
MabI ACCWGGT 1 cut(s) 641
MaeI CTAG 3 cut(s) 506, 540, 1019
MaeII ACGT 1 cut(s) 1125
MaeIII GTNAC 1 cut(s) 1147
MalI GATC 5 cut(s) 207, 222, 612, 1142, 1219
MboI GATC 5 cut(s) 205, 220, 610, 1140, 1217
MboII GAAGA 8 cut(s) 106, 109, 200, 428, 431, 434, 640, 869
MflI RGATCY 2 cut(s) 205, 1217
MhlI GDGCHC 2 cut(s) 288, 772
MlsI TGGCCA 1 cut(s) 408
MluNI TGGCCA 1 cut(s) 408
MlyI GAGTC 1 cut(s) 755
MmeI TCCRAC 1 cut(s) 1195
Mox20I TGGCCA 1 cut(s) 408
MroXI GAANNNNTTC 1 cut(s) 687
MscI TGGCCA 1 cut(s) 408
MseI TTAA 2 cut(s) 276, 978
MslI CAYNNNNRTG 1 cut(s) 1154
Msp20I TGGCCA 1 cut(s) 408
MspA1I CMGCKG 2 cut(s) 86, 308
MspI CCGG 2 cut(s) 41, 566
MspR9I CCNGG 2 cut(s) 41, 643
MvaI CCWGG 1 cut(s) 643
MvnI CGCG 1 cut(s) 948
MwoI GCNNNNNNNGC 5 cut(s) 56, 83, 566, 842, 1015
NciI CCSGG 1 cut(s) 41
NdeII GATC 5 cut(s) 205, 220, 610, 1140, 1217
NlaIII CATG 3 cut(s) 712, 1090, 1121
NlaIV GGNNCC 1 cut(s) 39
NmeAIII GCCGAG 1 cut(s) 209
NmuCI GTSAC 1 cut(s) 1147
NsbI TGCGCA 1 cut(s) 534
NspV TTCGAA 1 cut(s) 480
PaeR7I CTCGAG 2 cut(s) 201, 893
PagI TCATGA 1 cut(s) 1117
PdmI GAANNNNTTC 1 cut(s) 687
PfeI GAWTC 2 cut(s) 193, 1003
PleI GAGTC 1 cut(s) 755
PpsI GAGTC 1 cut(s) 755
Ppu21I YACGTR 1 cut(s) 1126
PshBI ATTAAT 1 cut(s) 978
Psp6I CCWGG 1 cut(s) 641
PspGI CCWGG 1 cut(s) 641
PspN4I GGNNCC 1 cut(s) 39
PspPI GGNCC 3 cut(s) 19, 37, 130
PspXI VCTCGAGB 1 cut(s) 893
PsuI RGATCY 2 cut(s) 205, 1217
RsaI GTAC 3 cut(s) 348, 438, 922
RsaNI GTAC 3 cut(s) 347, 437, 921
RseI CAYNNNNRTG 1 cut(s) 1154
SaqAI TTAA 2 cut(s) 276, 978
Sau3AI GATC 5 cut(s) 205, 220, 610, 1140, 1217
Sau96I GGNCC 3 cut(s) 19, 37, 130
SchI GAGTC 1 cut(s) 755
ScrFI CCNGG 2 cut(s) 41, 643
SduI GDGCHC 2 cut(s) 288, 772
SexAI ACCWGGT 1 cut(s) 641
SfaNI GCATC 2 cut(s) 415, 520
SfcI CTRYAG 1 cut(s) 804
Sfr274I CTCGAG 2 cut(s) 201, 893
SfuI TTCGAA 1 cut(s) 480
SinI GGWCC 2 cut(s) 37, 130
SlaI CTCGAG 2 cut(s) 201, 893
SmiMI CAYNNNNRTG 1 cut(s) 1154
SmlI CTYRAG 4 cut(s) 72, 201, 548, 893
SmoI CTYRAG 4 cut(s) 72, 201, 548, 893
SnaBI TACGTA 1 cut(s) 1126
SsiI CCGC 7 cut(s) 44, 47, 50, 84, 181, 308, 1074
SspMI CTAG 3 cut(s) 506, 540, 1019
StyD4I CCNGG 2 cut(s) 39, 641
StyI CCWWGG 1 cut(s) 409
TaaI ACNGT 3 cut(s) 151, 853, 1045
TaiI ACGT 1 cut(s) 1128
TaqI TCGA 8 cut(s) 202, 219, 456, 480, 681, 873, 894, 957
TatI WGTACW 1 cut(s) 346
TauI GCSGC 4 cut(s) 47, 50, 86, 1076
TfiI GAWTC 2 cut(s) 193, 1003
Tru1I TTAA 2 cut(s) 276, 978
Tru9I TTAA 2 cut(s) 276, 978
TseFI GTSAC 1 cut(s) 1147
TseI GCWGC 6 cut(s) 31, 86, 554, 557, 842, 943
Tsp45I GTSAC 1 cut(s) 1147
TspDTI ATGAA 4 cut(s) 483, 690, 1103, 1134
TspGWI ACGGA 1 cut(s) 228
VpaK11BI GGWCC 2 cut(s) 37, 130
VspI ATTAAT 1 cut(s) 978
XapI RAATTY 2 cut(s) 470, 482
XhoI CTCGAG 2 cut(s) 201, 893
XmiI GTMKAC 2 cut(s) 242, 1100
XmnI GAANNNNTTC 1 cut(s) 687
XspI CTAG 3 cut(s) 506, 540, 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.