Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0000719

Physical Location & Seq

Genomic Coordinates Forward (+)

3750918 .. 3754478

Gene Structure 3561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG023000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1203 bp

ATGACTCGAGGAGGAGGAGGAGACGGGGAAGCCGTTGCGGCGGTGGCGGTGGTGGACCCTCAGGCGGTGGTGGCGGTGAAGAAGAAGTCGTCTCGGAGCTGGGTTTTGCTGGACGCGACGGGACAAGCGACGGTGTTGGATGTGGACAAGTATGCGATCATGCACAGAGTCCACATTCACGCTCGGGATCTCCGCATTGTCGACCCTCTGCTCTCTTACCCTTCCGCCATTCTCGGACGTGACAGGGCTATTGTTCTCAATCTGGAGCATATTAAAGCAATAATTACTGCTGAAGAGGTGCTGCTTCGGGATCCGTTGGATGAAAATGTTATTCCTGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCTGTAAATTCCAATCGTGAAAATCAAACAGATGGAAGAGAGTTCCCTGCTGGGCACAATGATGTTGAGGCGGGTGAAGAAGATGAGTCTCCATTTGAATTCCGGGCCTTGGAGGTAGCTTTGGAAGCAATTTGTAGTTTTCTTGCTGCACGTACGACAGAGCTGGAGACTGATGCTTATCCGGCTCTAGATGAGCTTACCTCTAAGATTAGTAGCCGCAATTTGGATAGGGTTCGTAAATTGAAAAGTGCAATGACAAGGTTGACTGCACGGGTCCAAAAGGTGAGGGATGAGCTCGAGCAGCTGCTGGATGATGATGATGATATGGCCGACCTTTACTTGTCAAGAAAGTTGGCAGGTGCATGTTCACCAGTTAGTGCCTCTGGTCCTCCCAATTGGTATCCTGCCTCCCCTACCATAGGGTCAAAAATATCACGGGCAAGTAGAGCAAGTATGGTAACTGTTCGTGGAGATGAGAATGATGTTGAGGAACTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGCACCTTGAACAAGTTAGCTACGCTGCGTGAATATATTGATGATACGGAGGATTACATAAATATTCAGCTTGATAACCACAGGAATCAGTTAATTCAGCTTGAGCTTTTTCTTAGTTCTGGAACTGTTAGCTTATCCATATATTCTTTGGTGGGTGGAATTTTTGGCATGAATATCCCATATACGTGGAACGAGGGTCATGGATACATGTTTAAATGGGTTTGCATTGTCACAGGAATAGTATGTTTCTTTGTTTTCATAGTAATTGTAGCATATGCTCGCCACAAAGGGTTGGTCGGATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0007275 GO:0008150 GO:0008324 GO:0009555 GO:0015075 GO:0015095 GO:0015318 GO:0015693 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0032501 GO:0032502 GO:0034220 GO:0044464 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0070838 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1903830

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CorA

Protein Analysis

400

Amino Acids

44.38

Weight (kDa)

4.9

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MRS2-like	PF22099	37 - 240	1.1e-26	Magnesium transporter MRS2-like
MRS2-like	PF22099	280 - 327	6.7e-08	Magnesium transporter MRS2-like
CorA	PF01544	289 - 388	2.1e-07	CorA-like Mg2+ transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09690 AT5G09720 AT5G09720 AT5G64560 AT5G64560
fragaria_vesca	FvH4_2g22370 FvH4_2g22370 FvH4_2g22410 FvH4_4g02330 FvH4_4g02330
malus_domestica	MD05G1204800.v1.1 MD10G1191900.v1.1 MD13G1205200.v1.1 MD16G1207000.v1.1
prunus_persica	Prupe.1G027800_v2.0.a1 Prupe.8G231400_v2.0.a1 Prupe.8G231400_v2.0.a1 Prupe.8G231400_v2.0.a1 Prupe.8G231400_v2.0.a1 Prupe.8G231400_v2.0.a1
pyrus_communis	pycom05g19100 pycom10g16560 pycom10g16580 pycom13g17790 pycom16g17380
rosa_chinensis	RchiOBHm_Chr2g0150571 RchiOBHm_Chr4g0389661 RchiOBHm_Chr4g0389711 RchiOBHm_Chr6g0289361
rosa_laevigata	RLG00000009961 RLG00000012309
rosa_multiflora	Rmu_sc0001527.1_g000030 Rmu_sc0005115.1_g000007 Rmu_sc0005697.1_g000020 Rmu_sc0007419.1_g000012
rosa_roxburghii	Rroxscaffold_5G00335660 Rroxscaffold_5G00335700 Rroxscaffold_7G00179320
rosa_rugosa	Rorug03G0310000 Rorug03G0324700 Rorug04G0112800 Rorug04G0112900 Rorug04G0113000
rosa_samantha	Rh4AG029400 Rh4AG029700 Rh4BG022600 Rh4BG022800 Rh4CG031300 Rh4DG023000 Rh5DG350100 Rh6BG321400 Rh6CG327700 Rh6DG313300
rosa_wichuraiana	Rw3G027490 Rw4G002190 Rw4G002220 Rw4G006140 Rw6G003570 Rw6G005340 Rw6G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	713
Acc36I	ACCTGC	1 cut(s)	713
AccB1I	GGYRCC	1 cut(s)	899
AccI	GTMKAC	1 cut(s)	201
AccII	CGCG	1 cut(s)	116
AciI	CCGC	9 cut(s)	38, 41, 47, 65, 74, 193, 225, 437, 583
AclWI	GGATC	3 cut(s)	195, 305, 318
AcoI	YGGCCR	1 cut(s)	693
AcsI	RAATTY	3 cut(s)	373, 464, 1056
AcuI	CTGAAG	1 cut(s)	312
AfaI	GTAC	1 cut(s)	520
AfiI	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
AflIII	ACRYGT	1 cut(s)	1104
AgsI	TTSAA	6 cut(s)	344, 353, 464, 610, 863, 907
AjiI	CACGTC	1 cut(s)	239
Alw21I	GWGCWC	1 cut(s)	663
Alw26I	GTCTC	4 cut(s)	15, 96, 459, 527
AlwI	GGATC	3 cut(s)	195, 305, 318
AlwNI	CAGNNNCTG	1 cut(s)	673
Ama87I	CYCGRG	3 cut(s)	6, 183, 662
AoxI	GGCC	2 cut(s)	471, 693
ApeKI	GCWGC	5 cut(s)	301, 512, 667, 670, 922
ApoI	RAATTY	3 cut(s)	373, 464, 1056
ArsI	GACNNNNNNTTYG	1 cut(s)	1176
Asp700I	GAANNNNTTC	1 cut(s)	348
AspS9I	GGNCC	4 cut(s)	55, 471, 640, 752
AsuC2I	CCSGG	1 cut(s)	470
AsuHPI	GGTGA	4 cut(s)	88, 452, 661, 726
AvaI	CYCGRG	3 cut(s)	6, 183, 662
AvaII	GGWCC	3 cut(s)	55, 640, 752
AxyI	CCTNAGG	1 cut(s)	60
BaeGI	GKGCMC	1 cut(s)	423
BamHI	GGATCC	1 cut(s)	310
BanI	GGYRCC	1 cut(s)	899
BanII	GRGCYC	1 cut(s)	663
Bbv12I	GWGCWC	1 cut(s)	663
BbvI	GCAGC	5 cut(s)	288, 499, 657, 679, 909
BccI	CCATC	2 cut(s)	392, 890
BceAI	ACGGC	1 cut(s)	17
BciVI	GTATCC	2 cut(s)	777, 1094
BcnI	CCSGG	1 cut(s)	470
BcoDI	GTCTC	4 cut(s)	15, 96, 459, 527
BfaI	CTAG	1 cut(s)	554
BfuAI	ACCTGC	1 cut(s)	713
BfuI	GTATCC	2 cut(s)	777, 1094
BglI	GCCNNNNNGGC	1 cut(s)	38
BisI	GCNGC	7 cut(s)	39, 302, 513, 583, 668, 671, 923
BlsI	GCNGC	7 cut(s)	40, 303, 514, 584, 669, 672, 924
Bme1390I	CCNGG	1 cut(s)	470
Bme18I	GGWCC	3 cut(s)	55, 640, 752
BmeT110I	CYCGRG	3 cut(s)	6, 183, 662
BmgBI	CACGTC	1 cut(s)	239
BmgT120I	GGNCC	4 cut(s)	55, 471, 640, 752
BmiI	GGNNCC	4 cut(s)	57, 312, 641, 901
BmrFI	CCNGG	1 cut(s)	470
BmsI	GCATC	1 cut(s)	529
BplI	GAGNNNNNCTC	2 cut(s)	551, 583
BpmI	CTGGAG	3 cut(s)	284, 551, 893
BpuEI	CTTGAG	1 cut(s)	1019
BpuMI	CCSGG	1 cut(s)	470
BsaAI	YACGTR	2 cut(s)	518, 1083
BsaBI	GATNNNNATC	1 cut(s)	543
BsaJI	CCNNGG	1 cut(s)	474
Bsc4I	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
Bse1I	ACTGG	2 cut(s)	737, 876
Bse21I	CCTNAGG	1 cut(s)	60
Bse3DI	GCAATG	1 cut(s)	624
Bse8I	GATNNNNATC	1 cut(s)	543
BseDI	CCNNGG	1 cut(s)	474
BseGI	GGATG	4 cut(s)	145, 325, 661, 682
BseJI	GATNNNNATC	1 cut(s)	543
BseLI	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
BseMI	GCAATG	1 cut(s)	624
BseMII	CTCAG	1 cut(s)	74
BseNI	ACTGG	2 cut(s)	737, 876
BseRI	GAGGAG	4 cut(s)	24, 27, 30, 33
BseSI	GKGCMC	1 cut(s)	423
BseXI	GCAGC	5 cut(s)	288, 499, 657, 679, 909
BseYI	CCCAGC	2 cut(s)	99, 416
BsgI	GTGCAG	2 cut(s)	498, 618
Bsh1236I	CGCG	1 cut(s)	116
BshFI	GGCC	2 cut(s)	473, 695
BshNI	GGYRCC	1 cut(s)	899
BsiHKAI	GWGCWC	1 cut(s)	663
BsiHKCI	CYCGRG	3 cut(s)	6, 183, 662
BsiSI	CCGG	2 cut(s)	469, 548
BsiWI	CGTACG	1 cut(s)	518
BslFI	GGGAC	1 cut(s)	135
BslI	CCNNNNNNNGG	4 cut(s)	64, 475, 589, 785
BsmAI	GTCTC	4 cut(s)	15, 96, 459, 527
BsmBI	CGTCTC	2 cut(s)	15, 96
BsmFI	GGGAC	1 cut(s)	135
BsnI	GGCC	2 cut(s)	473, 695
BsoBI	CYCGRG	3 cut(s)	6, 183, 662
Bsp1286I	GDGCHC	2 cut(s)	423, 663
Bsp143I	GATC	4 cut(s)	156, 187, 310, 1196
BspACI	CCGC	9 cut(s)	38, 41, 47, 65, 74, 193, 225, 437, 583
BspANI	GGCC	2 cut(s)	473, 695
BspCNI	CTCAG	1 cut(s)	73
BspFNI	CGCG	1 cut(s)	116
BspLI	GGNNCC	4 cut(s)	57, 312, 641, 901
BspMI	ACCTGC	1 cut(s)	713
BspPI	GGATC	3 cut(s)	195, 305, 318
BspQI	GCTCTTC	1 cut(s)	339
BspT107I	GGYRCC	1 cut(s)	899
BsrDI	GCAATG	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	737, 876
BssECI	CCNNGG	1 cut(s)	474
BssMI	GATC	4 cut(s)	156, 187, 310, 1196
BssT1I	CCWWGG	1 cut(s)	474
Bst4CI	ACNGT	4 cut(s)	133, 360, 829, 1024
Bst6I	CTCTTC	3 cut(s)	288, 339, 397
BstBAI	YACGTR	2 cut(s)	518, 1083
BstC8I	GCNNGC	1 cut(s)	1177
BstDEI	CTNAG	3 cut(s)	60, 570, 1010
BstENI	CCTNNNNNAGG	1 cut(s)	783
BstF5I	GGATG	4 cut(s)	145, 325, 661, 682
BstFNI	CGCG	1 cut(s)	116
BstKTI	GATC	4 cut(s)	159, 190, 313, 1199
BstMAI	GTCTC	4 cut(s)	15, 96, 459, 527
BstMBI	GATC	4 cut(s)	156, 187, 310, 1196
BstMWI	GCNNNNNNNGC	7 cut(s)	38, 44, 71, 491, 548, 667, 812
BstNSI	RCATGY	2 cut(s)	732, 1108
BstSCI	CCNGG	1 cut(s)	468
BstSLI	GKGCMC	1 cut(s)	423
BstUI	CGCG	1 cut(s)	116
BstV1I	GCAGC	5 cut(s)	288, 499, 657, 679, 909
BstX2I	RGATCY	2 cut(s)	187, 310
BstXI	CCANNNNNNTGG	1 cut(s)	1083
BstYI	RGATCY	2 cut(s)	187, 310
Bsu36I	CCTNAGG	1 cut(s)	60
BsuI	GTATCC	2 cut(s)	777, 1094
BsuRI	GGCC	2 cut(s)	473, 695
BtrI	CACGTC	1 cut(s)	239
BtsCI	GGATG	4 cut(s)	145, 325, 661, 682
BveI	ACCTGC	1 cut(s)	713
Cac8I	GCNNGC	1 cut(s)	1177
CaiI	CAGNNNCTG	1 cut(s)	673
Cfr13I	GGNCC	4 cut(s)	55, 471, 640, 752
CseI	GACGC	1 cut(s)	122
Csp6I	GTAC	1 cut(s)	519
CviAII	CATG	5 cut(s)	160, 729, 1066, 1097, 1105
CviQI	GTAC	1 cut(s)	519
DdeI	CTNAG	3 cut(s)	60, 570, 1010
DpnI	GATC	4 cut(s)	158, 189, 312, 1198
DpnII	GATC	4 cut(s)	156, 187, 310, 1196
DraI	TTTAAA	1 cut(s)	1111
EaeI	YGGCCR	1 cut(s)	693
Eam1104I	CTCTTC	3 cut(s)	288, 339, 397
EarI	CTCTTC	3 cut(s)	288, 339, 397
EciI	GGCGGA	1 cut(s)	214
Ecl136II	GAGCTC	1 cut(s)	661
Eco130I	CCWWGG	1 cut(s)	474
Eco24I	GRGCYC	1 cut(s)	663
Eco47I	GGWCC	3 cut(s)	55, 640, 752
Eco53kI	GAGCTC	1 cut(s)	661
Eco57I	CTGAAG	1 cut(s)	312
Eco81I	CCTNAGG	1 cut(s)	60
Eco88I	CYCGRG	3 cut(s)	6, 183, 662
EcoICRI	GAGCTC	1 cut(s)	661
EcoNI	CCTNNNNNAGG	1 cut(s)	783
EcoRI	GAATTC	1 cut(s)	464
EcoT14I	CCWWGG	1 cut(s)	474
EcoT38I	GRGCYC	1 cut(s)	663
ErhI	CCWWGG	1 cut(s)	474
Esp3I	CGTCTC	2 cut(s)	15, 96
FaeI	CATG	5 cut(s)	163, 732, 1069, 1100, 1108
FaqI	GGGAC	1 cut(s)	135
FatI	CATG	5 cut(s)	159, 728, 1065, 1096, 1104
FauI	CCCGC	1 cut(s)	430
FauNDI	CATATG	1 cut(s)	1171
FblI	GTMKAC	1 cut(s)	201
Fnu4HI	GCNGC	7 cut(s)	39, 302, 513, 583, 668, 671, 923
FokI	GGATG	4 cut(s)	152, 332, 668, 689
FriOI	GRGCYC	1 cut(s)	663
Fsp4HI	GCNGC	7 cut(s)	39, 302, 513, 583, 668, 671, 923
FspBI	CTAG	1 cut(s)	554
GluI	GCNGC	7 cut(s)	39, 302, 513, 583, 668, 671, 923
GsaI	CCCAGC	2 cut(s)	103, 420
GsuI	CTGGAG	3 cut(s)	284, 551, 893
HaeIII	GGCC	2 cut(s)	473, 695
HapII	CCGG	2 cut(s)	469, 548
HgaI	GACGC	1 cut(s)	122
Hin1II	CATG	5 cut(s)	163, 732, 1069, 1100, 1108
HincII	GTYRAC	2 cut(s)	202, 630
HindII	GTYRAC	2 cut(s)	202, 630
HinfI	GANTC	4 cut(s)	4, 168, 452, 982
HpaII	CCGG	2 cut(s)	469, 548
HphI	GGTGA	4 cut(s)	88, 452, 661, 726
Hpy166II	GTNNAC	6 cut(s)	55, 145, 172, 202, 630, 734
Hpy188I	TCNGA	3 cut(s)	96, 236, 1196
Hpy188III	TCNNGA	8 cut(s)	185, 263, 308, 383, 554, 711, 1017, 1200
Hpy8I	GTNNAC	6 cut(s)	55, 145, 172, 202, 630, 734
Hpy99I	CGWCG	2 cut(s)	121, 133
HpyAV	CCTTC	1 cut(s)	231
HpyCH4III	ACNGT	4 cut(s)	133, 360, 829, 1024
HpyCH4IV	ACGT	3 cut(s)	238, 517, 1082
HpyCH4V	TGCA	7 cut(s)	163, 515, 617, 635, 728, 889, 1122
HpyF10VI	GCNNNNNNNGC	7 cut(s)	38, 44, 71, 491, 548, 667, 812
HpyF3I	CTNAG	3 cut(s)	60, 570, 1010
HpySE526I	ACGT	3 cut(s)	238, 517, 1082
Hsp92II	CATG	5 cut(s)	163, 732, 1069, 1100, 1108
Kzo9I	GATC	4 cut(s)	156, 187, 310, 1196
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	2 cut(s)	96, 265
Lsp1109I	GCAGC	5 cut(s)	288, 499, 657, 679, 909
LweI	GCATC	1 cut(s)	529
MaeI	CTAG	1 cut(s)	554
MaeII	ACGT	3 cut(s)	238, 517, 1082
MaeIII	GTNAC	4 cut(s)	239, 823, 867, 1126
MalI	GATC	4 cut(s)	158, 189, 312, 1198
MboI	GATC	4 cut(s)	156, 187, 310, 1196
MboII	GAAGA	7 cut(s)	91, 94, 305, 356, 414, 455, 458
MfeI	CAATTG	1 cut(s)	760
MflI	RGATCY	2 cut(s)	187, 310
MhlI	GDGCHC	2 cut(s)	423, 663
MlyI	GAGTC	2 cut(s)	177, 461
MmeI	TCCRAC	3 cut(s)	117, 297, 1174
MroXI	GAANNNNTTC	1 cut(s)	348
MseI	TTAA	3 cut(s)	273, 989, 1110
MslI	CAYNNNNRTG	2 cut(s)	426, 1081
MspA1I	CMGCKG	1 cut(s)	670
MspI	CCGG	2 cut(s)	469, 548
MspR9I	CCNGG	1 cut(s)	470
MunI	CAATTG	1 cut(s)	760
MvnI	CGCG	1 cut(s)	116
MwoI	GCNNNNNNNGC	7 cut(s)	38, 44, 71, 491, 548, 667, 812
NciI	CCSGG	1 cut(s)	470
NdeI	CATATG	1 cut(s)	1171
NdeII	GATC	4 cut(s)	156, 187, 310, 1196
NlaIII	CATG	5 cut(s)	163, 732, 1069, 1100, 1108
NlaIV	GGNNCC	4 cut(s)	57, 312, 641, 901
NmuCI	GTSAC	2 cut(s)	239, 1126
NspI	RCATGY	2 cut(s)	732, 1108
PaeR7I	CTCGAG	2 cut(s)	6, 662
PaqCI	CACCTGC	1 cut(s)	713
PciI	ACATGT	1 cut(s)	1104
PciSI	GCTCTTC	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	2 cut(s)	30, 125
PdmI	GAANNNNTTC	1 cut(s)	348
PfeI	GAWTC	1 cut(s)	982
Pfl23II	CGTACG	1 cut(s)	518
PkrI	GCNGC	7 cut(s)	40, 303, 514, 584, 669, 672, 924
PleI	GAGTC	2 cut(s)	176, 460
PpsI	GAGTC	2 cut(s)	176, 460
Ppu21I	YACGTR	2 cut(s)	518, 1083
PscI	ACATGT	1 cut(s)	1104
Psp124BI	GAGCTC	1 cut(s)	663
PspFI	CCCAGC	2 cut(s)	99, 416
PspLI	CGTACG	1 cut(s)	518
PspN4I	GGNNCC	4 cut(s)	57, 312, 641, 901
PspPI	GGNCC	4 cut(s)	55, 471, 640, 752
PspXI	VCTCGAGB	2 cut(s)	6, 662
PstNI	CAGNNNCTG	1 cut(s)	673
PsuI	RGATCY	2 cut(s)	187, 310
PvuII	CAGCTG	1 cut(s)	670
RsaI	GTAC	1 cut(s)	520
RsaNI	GTAC	1 cut(s)	519
RseI	CAYNNNNRTG	2 cut(s)	426, 1081
SacI	GAGCTC	1 cut(s)	663
SalI	GTCGAC	1 cut(s)	200
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	3 cut(s)	273, 989, 1110
SatI	GCNGC	7 cut(s)	39, 302, 513, 583, 668, 671, 923
Sau3AI	GATC	4 cut(s)	156, 187, 310, 1196
Sau96I	GGNCC	4 cut(s)	55, 471, 640, 752
SchI	GAGTC	2 cut(s)	177, 461
ScrFI	CCNGG	1 cut(s)	470
SduI	GDGCHC	2 cut(s)	423, 663
SfaNI	GCATC	1 cut(s)	529
Sfr274I	CTCGAG	2 cut(s)	6, 662
SinI	GGWCC	3 cut(s)	55, 640, 752
SlaI	CTCGAG	2 cut(s)	6, 662
SmiMI	CAYNNNNRTG	2 cut(s)	426, 1081
SmlI	CTYRAG	3 cut(s)	6, 662, 998
SmoI	CTYRAG	3 cut(s)	6, 662, 998
SsiI	CCGC	9 cut(s)	38, 41, 47, 65, 74, 193, 225, 437, 583
SspI	AATATT	1 cut(s)	961
SspMI	CTAG	1 cut(s)	554
SstI	GAGCTC	1 cut(s)	663
StyD4I	CCNGG	1 cut(s)	468
StyI	CCWWGG	1 cut(s)	474
TaaI	ACNGT	4 cut(s)	133, 360, 829, 1024
TaiI	ACGT	3 cut(s)	241, 520, 1085
TaqI	TCGA	3 cut(s)	7, 201, 663
TauI	GCSGC	2 cut(s)	41, 585
TfiI	GAWTC	1 cut(s)	982
Tru1I	TTAA	3 cut(s)	273, 989, 1110
Tru9I	TTAA	3 cut(s)	273, 989, 1110
TseFI	GTSAC	2 cut(s)	239, 1126
TseI	GCWGC	5 cut(s)	301, 512, 667, 670, 922
Tsp45I	GTSAC	2 cut(s)	239, 1126
TspDTI	ATGAA	3 cut(s)	336, 1082, 1144
TspGWI	ACGGA	2 cut(s)	303, 959
VpaK11BI	GGWCC	3 cut(s)	55, 640, 752
XagI	CCTNNNNNAGG	1 cut(s)	783
XapI	RAATTY	3 cut(s)	373, 464, 1056
XbaI	TCTAGA	1 cut(s)	553
XceI	RCATGY	2 cut(s)	732, 1108
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1042
XhoI	CTCGAG	2 cut(s)	6, 662
XmiI	GTMKAC	1 cut(s)	201
XmnI	GAANNNNTTC	1 cut(s)	348
XspI	CTAG	1 cut(s)	554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.