Prupe.1G027800_v2.0.a1

magnesium transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
1947760 .. 1953157
5398 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G027800.1

Sequence Viewer

Length: 1179 bp
ATGGCTCGAGACGGGGAAGTGGTGCCGGTGGACCCACAAGCGGTTGTGGCCGTGAAGAAGAAGTCGTCTCGGAGTTGGGTTTTGCTGGACTGTACGGGAAAAGCTACAGTCTTGGACGTGGACAAGTATGCCATCATGCACAGAGTTCACATTCACGCTCGCGATCTTCGCATTGTCGATCCTTTGCTCTCTTACCCTTCCACCATTCTCGGCCGCGACAGGGCTATAGTTCTCAATTTGGAGCATATTAAAGCAATAATCACTGCCGAAGAGGTGCTGCTTCGGGATCCAGTGGATGAAAATGTTATCCCTGTTGTTGAAGAGCTTCAAAGACGGTTGCCTCCCGTAAATGCCATACATGAAAGCCAAAAAGATGGGAAAGAGTTCCCTGCTGGGCTAATTGATGTAGATGCCGGTGAAGAAGATGAGTCTCCATTTGAGTTCCGGGCCTTGGAGGTAGCTTTGGAAGCAATTTGCAGTTATCTTTCTGCACGTACGACAGAACTGGAGACTGCTGCTTATCCTGCTTTAGATGAGCTTACCTCAAAGATTAGCAGCCGCAATTTGGACAGGGTTCGTAAATTGAAGAGTGCAATGACAAGGTTGACTGCTCGCGTACAAAAGGTAAGGGATGAGCTTGAACAGCTGTTGGATGATGACGATGATATGGCTGACCTTTACTTGTCAAGAAAGTTGGCTGGTGCATCTTCACCAGTTAGTGTCTCTGGTCCTCCCAATTGGTATCCTGCCTCCCCTACCATAGGCTCAAAAATATCTCGGGCAAGTAGAGCAAGCATTGCCACTGTTCGTGGAGATGAGAATGACGTTGAGGAACTTGAAATGTTACTTGAGGCTTATTTTATGCAGATTGATGGCACCTTGAACAAATTAGCTACGCTGCGTGAATATATTGATGATACAGAGGATTATATCAATATTCAGCTTGATAACCACAGGAATCAGCTGATTCAGCTTGAGCTTTTTCTCAGTGCTGGGACTCTATGTATGGCCATATTTTCATTGGTGGCTGGAATTTTTGGCATGAACATCCCTTATACGTGGAATGATGGTTACGGATACATGTTCAAATGGGTTTGCATTGTCACGGGAATAGTCTGTGCTTGTGTGTTCATAATTATCATGTCATATGCTCGCTTCAAGGGGTTGGTCGGGTCGTGA

Protein Analysis

393

Amino Acids

43.71

Weight (kDa)

4.89

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 22, 875
AccII CGCG 3 cut(s) 162, 216, 615
AciI CCGC 3 cut(s) 41, 214, 559
AclWI GGATC 3 cut(s) 173, 281, 294
AcoI YGGCCR 3 cut(s) 48, 211, 1008
AcsI RAATTY 1 cut(s) 1032
AfaI GTAC 3 cut(s) 94, 496, 618
AfiI CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
AflIII ACRYGT 1 cut(s) 1080
AgsI TTSAA 8 cut(s) 320, 329, 586, 641, 839, 883, 1087, 1159
AjiI CACGTC 1 cut(s) 118
Alw26I GTCTC 5 cut(s) 3, 72, 435, 503, 727
AlwI GGATC 3 cut(s) 173, 281, 294
Ama87I CYCGRG 2 cut(s) 6, 777
AoxI GGCC 4 cut(s) 48, 211, 447, 1008
ApeKI GCWGC 4 cut(s) 277, 515, 555, 898
ApoI RAATTY 1 cut(s) 1032
Asp700I GAANNNNTTC 2 cut(s) 324, 383
AspS9I GGNCC 3 cut(s) 31, 447, 728
AsuC2I CCSGG 1 cut(s) 446
AsuHPI GGTGA 2 cut(s) 428, 702
AvaI CYCGRG 2 cut(s) 6, 777
AvaII GGWCC 2 cut(s) 31, 728
BalI TGGCCA 1 cut(s) 1010
BamHI GGATCC 1 cut(s) 286
BanI GGYRCC 2 cut(s) 22, 875
BbvI GCAGC 4 cut(s) 264, 502, 567, 885
BccI CCATC 4 cut(s) 140, 368, 866, 1061
BceAI ACGGC 1 cut(s) 35
BciVI GTATCC 2 cut(s) 753, 1070
BcnI CCSGG 1 cut(s) 446
BcoDI GTCTC 5 cut(s) 3, 72, 435, 503, 727
BfmI CTRYAG 2 cut(s) 105, 225
BfuI GTATCC 2 cut(s) 753, 1070
BisI GCNGC 6 cut(s) 214, 278, 516, 556, 559, 899
BlsI GCNGC 6 cut(s) 215, 279, 517, 557, 560, 900
Bme1390I CCNGG 1 cut(s) 446
Bme18I GGWCC 2 cut(s) 31, 728
BmeT110I CYCGRG 2 cut(s) 6, 777
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 3 cut(s) 31, 447, 728
BmiI GGNNCC 4 cut(s) 24, 33, 288, 877
BmrFI CCNGG 1 cut(s) 446
BmsI GCATC 2 cut(s) 400, 713
BplI GAGNNNNNCTC 2 cut(s) 527, 559
BpmI CTGGAG 1 cut(s) 527
BpuEI CTTGAG 2 cut(s) 869, 995
BpuMI CCSGG 1 cut(s) 446
BsaAI YACGTR 2 cut(s) 494, 1059
BsaJI CCNNGG 1 cut(s) 450
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
Bse118I RCCGGY 2 cut(s) 25, 413
Bse1I ACTGG 3 cut(s) 290, 510, 713
Bse3DI GCAATG 2 cut(s) 600, 795
BseDI CCNNGG 1 cut(s) 450
BseGI GGATG 4 cut(s) 301, 637, 658, 1047
BseLI CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
BseMI GCAATG 2 cut(s) 600, 795
BseMII CTCAG 1 cut(s) 1000
BseNI ACTGG 3 cut(s) 290, 510, 713
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 4 cut(s) 264, 502, 567, 885
BseYI CCCAGC 2 cut(s) 392, 992
BsgI GTGCAG 1 cut(s) 474
Bsh1236I CGCG 3 cut(s) 162, 216, 615
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 4 cut(s) 50, 213, 449, 1010
BshNI GGYRCC 2 cut(s) 22, 875
BsiEI CGRYCG 1 cut(s) 214
BsiHKCI CYCGRG 2 cut(s) 6, 777
BsiSI CCGG 3 cut(s) 26, 414, 445
BsiWI CGTACG 1 cut(s) 494
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 5 cut(s) 40, 220, 451, 565, 761
BsmAI GTCTC 5 cut(s) 3, 72, 435, 503, 727
BsmBI CGTCTC 2 cut(s) 3, 72
BsmFI GGGAC 1 cut(s) 1009
BsnI GGCC 4 cut(s) 50, 213, 449, 1010
BsoBI CYCGRG 2 cut(s) 6, 777
Bsp143I GATC 3 cut(s) 163, 178, 286
Bsp68I TCGCGA 1 cut(s) 162
BspACI CCGC 3 cut(s) 41, 214, 559
BspANI GGCC 4 cut(s) 50, 213, 449, 1010
BspCNI CTCAG 1 cut(s) 999
BspFNI CGCG 3 cut(s) 162, 216, 615
BspLI GGNNCC 4 cut(s) 24, 33, 288, 877
BspPI GGATC 3 cut(s) 173, 281, 294
BspQI GCTCTTC 1 cut(s) 315
BspT107I GGYRCC 2 cut(s) 22, 875
BsrDI GCAATG 2 cut(s) 600, 795
BsrFI RCCGGY 2 cut(s) 25, 413
BsrI ACTGG 3 cut(s) 290, 510, 713
BssAI RCCGGY 2 cut(s) 25, 413
BssECI CCNNGG 1 cut(s) 450
BssMI GATC 3 cut(s) 163, 178, 286
BssT1I CCWWGG 1 cut(s) 450
Bst4CI ACNGT 4 cut(s) 92, 109, 336, 805
Bst6I CTCTTC 3 cut(s) 264, 315, 581
BstAPI GCANNNNNTGC 1 cut(s) 797
BstBAI YACGTR 2 cut(s) 494, 1059
BstC8I GCNNGC 4 cut(s) 160, 613, 793, 1153
BstDEI CTNAG 1 cut(s) 986
BstENI CCTNNNNNAGG 1 cut(s) 759
BstF5I GGATG 4 cut(s) 301, 637, 658, 1047
BstFNI CGCG 3 cut(s) 162, 216, 615
BstKTI GATC 3 cut(s) 166, 181, 289
BstMAI GTCTC 5 cut(s) 3, 72, 435, 503, 727
BstMBI GATC 3 cut(s) 163, 178, 286
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 8 cut(s) 47, 168, 467, 524, 643, 788, 797, 970
BstNSI RCATGY 1 cut(s) 1084
BstSCI CCNGG 1 cut(s) 444
BstSFI CTRYAG 2 cut(s) 105, 225
BstUI CGCG 3 cut(s) 162, 216, 615
BstV1I GCAGC 4 cut(s) 264, 502, 567, 885
BstX2I RGATCY 1 cut(s) 286
BstXI CCANNNNNNTGG 1 cut(s) 374
BstYI RGATCY 1 cut(s) 286
BstZI CGGCCG 1 cut(s) 211
BsuI GTATCC 2 cut(s) 753, 1070
BsuRI GGCC 4 cut(s) 50, 213, 449, 1010
BtrI CACGTC 1 cut(s) 118
BtsCI GGATG 4 cut(s) 301, 637, 658, 1047
BtsI GCAGTG 1 cut(s) 261
BtsIMutI CAGTG 4 cut(s) 261, 297, 801, 994
BtuMI TCGCGA 1 cut(s) 162
Cac8I GCNNGC 4 cut(s) 160, 613, 793, 1153
Cfr10I RCCGGY 2 cut(s) 25, 413
Cfr13I GGNCC 3 cut(s) 31, 447, 728
Csp6I GTAC 3 cut(s) 93, 495, 617
CviAII CATG 5 cut(s) 136, 359, 1042, 1081, 1141
CviQI GTAC 3 cut(s) 93, 495, 617
DdeI CTNAG 1 cut(s) 986
DpnI GATC 3 cut(s) 165, 180, 288
DpnII GATC 3 cut(s) 163, 178, 286
EaeI YGGCCR 3 cut(s) 48, 211, 1008
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 3 cut(s) 264, 315, 581
EarI CTCTTC 3 cut(s) 264, 315, 581
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 450
Eco47I GGWCC 2 cut(s) 31, 728
Eco52I CGGCCG 1 cut(s) 211
Eco88I CYCGRG 2 cut(s) 6, 777
EcoNI CCTNNNNNAGG 1 cut(s) 759
EcoT14I CCWWGG 1 cut(s) 450
ErhI CCWWGG 1 cut(s) 450
Esp3I CGTCTC 2 cut(s) 3, 72
FaeI CATG 5 cut(s) 139, 362, 1045, 1084, 1144
FaqI GGGAC 1 cut(s) 1009
FatI CATG 5 cut(s) 135, 358, 1041, 1080, 1140
FauNDI CATATG 1 cut(s) 1147
Fnu4HI GCNGC 6 cut(s) 214, 278, 516, 556, 559, 899
FokI GGATG 4 cut(s) 308, 644, 665, 1034
Fsp4HI GCNGC 6 cut(s) 214, 278, 516, 556, 559, 899
GluI GCNGC 6 cut(s) 214, 278, 516, 556, 559, 899
GsaI CCCAGC 2 cut(s) 396, 996
GsuI CTGGAG 1 cut(s) 527
HaeIII GGCC 4 cut(s) 50, 213, 449, 1010
HapII CCGG 3 cut(s) 26, 414, 445
Hin1II CATG 5 cut(s) 139, 362, 1045, 1084, 1144
HincII GTYRAC 1 cut(s) 606
HindII GTYRAC 1 cut(s) 606
HinfI GANTC 4 cut(s) 428, 958, 967, 997
HpaII CCGG 3 cut(s) 26, 414, 445
HphI GGTGA 2 cut(s) 428, 702
Hpy166II GTNNAC 4 cut(s) 31, 121, 148, 606
Hpy188I TCNGA 1 cut(s) 72
Hpy188III TCNNGA 5 cut(s) 8, 161, 284, 687, 1176
Hpy8I GTNNAC 4 cut(s) 31, 121, 148, 606
HpyAV CCTTC 1 cut(s) 207
HpyCH4III ACNGT 4 cut(s) 92, 109, 336, 805
HpyCH4IV ACGT 4 cut(s) 117, 493, 825, 1058
HpyCH4V TGCA 7 cut(s) 139, 477, 491, 593, 704, 865, 1098
HpyF10VI GCNNNNNNNGC 8 cut(s) 47, 168, 467, 524, 643, 788, 797, 970
HpyF3I CTNAG 1 cut(s) 986
HpySE526I ACGT 4 cut(s) 117, 493, 825, 1058
Hsp92II CATG 5 cut(s) 139, 362, 1045, 1084, 1144
Kzo9I GATC 3 cut(s) 163, 178, 286
LguI GCTCTTC 1 cut(s) 315
LmnI GCTCC 1 cut(s) 241
Lsp1109I GCAGC 4 cut(s) 264, 502, 567, 885
LweI GCATC 2 cut(s) 400, 713
MaeII ACGT 4 cut(s) 117, 493, 825, 1058
MaeIII GTNAC 3 cut(s) 843, 1070, 1102
MalI GATC 3 cut(s) 165, 180, 288
MboI GATC 3 cut(s) 163, 178, 286
MboII GAAGA 9 cut(s) 67, 70, 158, 281, 332, 431, 434, 598, 699
MfeI CAATTG 1 cut(s) 736
MflI RGATCY 1 cut(s) 286
MlsI TGGCCA 1 cut(s) 1010
MluCI AATT 9 cut(s) 235, 399, 471, 562, 581, 736, 887, 1032, 1134
MluNI TGGCCA 1 cut(s) 1010
MlyI GAGTC 2 cut(s) 437, 991
MmeI TCCRAC 1 cut(s) 630
MnlI CCTC 9 cut(s) 265, 351, 448, 553, 741, 760, 823, 844, 916
Mox20I TGGCCA 1 cut(s) 1010
MroXI GAANNNNTTC 2 cut(s) 324, 383
MscI TGGCCA 1 cut(s) 1010
MseI TTAA 1 cut(s) 249
Msp20I TGGCCA 1 cut(s) 1010
MspA1I CMGCKG 2 cut(s) 646, 964
MspI CCGG 3 cut(s) 26, 414, 445
MspR9I CCNGG 1 cut(s) 446
MunI CAATTG 1 cut(s) 736
MvnI CGCG 3 cut(s) 162, 216, 615
MwoI GCNNNNNNNGC 8 cut(s) 47, 168, 467, 524, 643, 788, 797, 970
NciI CCSGG 1 cut(s) 446
NdeI CATATG 1 cut(s) 1147
NdeII GATC 3 cut(s) 163, 178, 286
NlaIII CATG 5 cut(s) 139, 362, 1045, 1084, 1144
NlaIV GGNNCC 4 cut(s) 24, 33, 288, 877
NmeAIII GCCGAG 1 cut(s) 189
NmuCI GTSAC 1 cut(s) 1102
NruI TCGCGA 1 cut(s) 162
NspI RCATGY 1 cut(s) 1084
PaeR7I CTCGAG 1 cut(s) 6
PciI ACATGT 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 315
PdmI GAANNNNTTC 2 cut(s) 324, 383
PfeI GAWTC 2 cut(s) 958, 967
Pfl23II CGTACG 1 cut(s) 494
PkrI GCNGC 6 cut(s) 215, 279, 517, 557, 560, 900
PleI GAGTC 2 cut(s) 436, 991
PpsI GAGTC 2 cut(s) 436, 991
Ppu21I YACGTR 2 cut(s) 494, 1059
PscI ACATGT 1 cut(s) 1080
PspFI CCCAGC 2 cut(s) 392, 992
PspLI CGTACG 1 cut(s) 494
PspN4I GGNNCC 4 cut(s) 24, 33, 288, 877
PspPI GGNCC 3 cut(s) 31, 447, 728
PsuI RGATCY 1 cut(s) 286
PvuII CAGCTG 2 cut(s) 646, 964
RruI TCGCGA 1 cut(s) 162
RsaI GTAC 3 cut(s) 94, 496, 618
RsaNI GTAC 3 cut(s) 93, 495, 617
SapI GCTCTTC 1 cut(s) 315
SaqAI TTAA 1 cut(s) 249
SatI GCNGC 6 cut(s) 214, 278, 516, 556, 559, 899
Sau3AI GATC 3 cut(s) 163, 178, 286
Sau96I GGNCC 3 cut(s) 31, 447, 728
SchI GAGTC 2 cut(s) 437, 991
ScrFI CCNGG 1 cut(s) 446
SfaNI GCATC 2 cut(s) 400, 713
SfcI CTRYAG 2 cut(s) 105, 225
Sfr274I CTCGAG 1 cut(s) 6
SinI GGWCC 2 cut(s) 31, 728
SlaI CTCGAG 1 cut(s) 6
SmlI CTYRAG 3 cut(s) 6, 848, 974
SmoI CTYRAG 3 cut(s) 6, 848, 974
Sse9I AATT 9 cut(s) 235, 399, 471, 562, 581, 736, 887, 1032, 1134
SsiI CCGC 3 cut(s) 41, 214, 559
SspI AATATT 1 cut(s) 937
StyD4I CCNGG 1 cut(s) 444
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 4 cut(s) 92, 109, 336, 805
TaiI ACGT 4 cut(s) 120, 496, 828, 1061
TaqI TCGA 2 cut(s) 7, 177
TasI AATT 9 cut(s) 235, 399, 471, 562, 581, 736, 887, 1032, 1134
TauI GCSGC 2 cut(s) 216, 561
TfiI GAWTC 2 cut(s) 958, 967
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TscAI CASTG 4 cut(s) 268, 297, 808, 994
TseFI GTSAC 1 cut(s) 1102
TseI GCWGC 4 cut(s) 277, 515, 555, 898
Tsp45I GTSAC 1 cut(s) 1102
TspDTI ATGAA 5 cut(s) 312, 375, 1008, 1058, 1120
TspGWI ACGGA 1 cut(s) 1089
TspRI CASTG 4 cut(s) 268, 297, 808, 994
VpaK11BI GGWCC 2 cut(s) 31, 728
XagI CCTNNNNNAGG 1 cut(s) 759
XapI RAATTY 1 cut(s) 1032
XceI RCATGY 1 cut(s) 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 1018
XhoI CTCGAG 1 cut(s) 6
XmnI GAANNNNTTC 2 cut(s) 324, 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.