MD06G1070200.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
16987112 .. 16989115
2004 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1070200.v1.1.491

Sequence Viewer

Length: 189 bp
ATGAGTTCAAAGGTACCATTTTCAGCTCACAGGGAGTTTAAGGAGATCCTTACGAGGCTTAGAGTACTTCATTGGAGGTTTTTGGACGTCGGGATATCGAGATATGCAAGTTTAAAGTTTTGGCTGGAAGTTCGGGGATTCTCAGGCAAGATCCAGTGGTTTTGGGAGCTTGAAATTGGTTTTAGGTAA

Protein Analysis

63

Amino Acids

7.59

Weight (kDa)

10.5

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 90
Acc65I GGTACC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 13
AclWI GGATC 2 cut(s) 40, 145
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 2 cut(s) 15, 66
AgsI TTSAA 2 cut(s) 9, 173
AluBI AGCT 2 cut(s) 26, 169
AluI AGCT 2 cut(s) 26, 169
AlwI GGATC 2 cut(s) 40, 145
Asp718I GGTACC 1 cut(s) 13
BanI GGYRCC 1 cut(s) 13
BmcAI AGTACT 1 cut(s) 66
BmiI GGNNCC 1 cut(s) 15
BsaHI GRCGYC 1 cut(s) 87
Bse1I ACTGG 1 cut(s) 154
BseMII CTCAG 1 cut(s) 156
BseNI ACTGG 1 cut(s) 154
BshNI GGYRCC 1 cut(s) 13
Bsp143I GATC 2 cut(s) 45, 150
BspCNI CTCAG 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 15
BspPI GGATC 2 cut(s) 40, 145
BspT107I GGYRCC 1 cut(s) 13
BsrI ACTGG 1 cut(s) 154
BssMI GATC 2 cut(s) 45, 150
BssNI GRCGYC 1 cut(s) 87
BstACI GRCGYC 1 cut(s) 87
BstDEI CTNAG 2 cut(s) 59, 142
BstKTI GATC 2 cut(s) 48, 153
BstMBI GATC 2 cut(s) 45, 150
BstX2I RGATCY 2 cut(s) 45, 150
BstYI RGATCY 2 cut(s) 45, 150
BtsIMutI CAGTG 1 cut(s) 161
Csp6I GTAC 2 cut(s) 14, 65
CviJI RGCY 4 cut(s) 26, 58, 124, 169
CviKI_1 RGCY 4 cut(s) 26, 58, 124, 169
CviQI GTAC 2 cut(s) 14, 65
DdeI CTNAG 2 cut(s) 59, 142
DpnI GATC 2 cut(s) 47, 152
DpnII GATC 2 cut(s) 45, 150
DraI TTTAAA 1 cut(s) 114
Eco32I GATATC 1 cut(s) 96
EcoRV GATATC 1 cut(s) 96
FaiI YATR 1 cut(s) 105
Hin1I GRCGYC 1 cut(s) 87
HinfI GANTC 1 cut(s) 138
Hpy188III TCNNGA 2 cut(s) 91, 99
Hpy99I CGWCG 1 cut(s) 92
HpyCH4IV ACGT 1 cut(s) 87
HpyCH4V TGCA 1 cut(s) 107
HpyF3I CTNAG 2 cut(s) 59, 142
HpySE526I ACGT 1 cut(s) 87
Hsp92I GRCGYC 1 cut(s) 87
KpnI GGTACC 1 cut(s) 17
Kzo9I GATC 2 cut(s) 45, 150
LmnI GCTCC 1 cut(s) 166
LpnPI CCDG 4 cut(s) 16, 110, 129, 167
MaeII ACGT 1 cut(s) 87
MalI GATC 2 cut(s) 47, 152
MboI GATC 2 cut(s) 45, 150
MflI RGATCY 2 cut(s) 45, 150
MluCI AATT 1 cut(s) 174
MnlI CCTC 2 cut(s) 48, 69
MseI TTAA 2 cut(s) 39, 113
NdeII GATC 2 cut(s) 45, 150
NlaIV GGNNCC 1 cut(s) 15
PfeI GAWTC 1 cut(s) 138
PspN4I GGNNCC 1 cut(s) 15
PsuI RGATCY 2 cut(s) 45, 150
RsaI GTAC 2 cut(s) 15, 66
RsaNI GTAC 2 cut(s) 14, 65
SaqAI TTAA 2 cut(s) 39, 113
Sau3AI GATC 2 cut(s) 45, 150
ScaI AGTACT 1 cut(s) 66
SetI ASST 6 cut(s) 15, 28, 80, 90, 171, 188
Sse9I AATT 1 cut(s) 174
TaiI ACGT 1 cut(s) 90
TaqI TCGA 1 cut(s) 98
TasI AATT 1 cut(s) 174
TatI WGTACW 1 cut(s) 64
TfiI GAWTC 1 cut(s) 138
Tru1I TTAA 2 cut(s) 39, 113
Tru9I TTAA 2 cut(s) 39, 113
TscAI CASTG 1 cut(s) 161
TspDTI ATGAA 1 cut(s) 59
TspRI CASTG 1 cut(s) 161
ZraI GACGTC 1 cut(s) 88
ZrmI AGTACT 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.