pycom07g11350

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
12005350 .. 12005850
501 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g11350.2

Sequence Viewer

Length: 375 bp
ATGATTAAGTTTCACTGTGCACACACGGATTTTCCTCTCATTTGTCCCTCACTCTCTCTTTTTCCCTCAACTCCCTCAAACTCACTCAACTCTCATCTCTCCCGTCAAGCTCTCTCTCTCTCCCTCACTCTCAAACACACGGCCAAAACAACAAGTTCATCAAAACTTCACAGATGGACGAAACAAAAATCACCATCTTCTTCGTTTCGACGATACGAGTCCAACCATACCAATTTCAAGACTTTTCAAGCTTATAGGAAGCTTCTTGAGGTCCTAAGGAGGCTTGGAGTAGTTCGTTGGAAGTGTTTGGACGAAAGAACACAGAGAACGACAAGTTCAAAGTTTGGCCGGAGCTTTCGGGGCTTTTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

125

Amino Acids

14.5

Weight (kDa)

11.22

Isoelectric Point (pI)

50.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 2 cut(s) 141, 346
AgsI TTSAA 3 cut(s) 238, 248, 339
AluBI AGCT 4 cut(s) 110, 251, 262, 354
AluI AGCT 4 cut(s) 110, 251, 262, 354
Alw21I GWGCWC 1 cut(s) 22
Alw44I GTGCAC 1 cut(s) 18
AoxI GGCC 2 cut(s) 141, 346
ApaLI GTGCAC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 271
AsuHPI GGTGA 1 cut(s) 183
AvaII GGWCC 1 cut(s) 271
AxyI CCTNAGG 1 cut(s) 275
BaeGI GKGCMC 1 cut(s) 22
Bbv12I GWGCWC 1 cut(s) 22
BccI CCATC 2 cut(s) 168, 202
BceAI ACGGC 1 cut(s) 156
Bme18I GGWCC 1 cut(s) 271
BmgT120I GGNCC 1 cut(s) 271
BpuEI CTTGAG 1 cut(s) 287
Bse21I CCTNAGG 1 cut(s) 275
BseSI GKGCMC 1 cut(s) 22
BshFI GGCC 2 cut(s) 143, 348
BsiHKAI GWGCWC 1 cut(s) 22
BsiSI CCGG 1 cut(s) 349
BslFI GGGAC 1 cut(s) 30
BsmFI GGGAC 1 cut(s) 30
BsnI GGCC 2 cut(s) 143, 348
Bsp1286I GDGCHC 1 cut(s) 22
BspANI GGCC 2 cut(s) 143, 348
Bst4CI ACNGT 1 cut(s) 17
BstDEI CTNAG 1 cut(s) 275
BstMWI GCNNNNNNNGC 1 cut(s) 360
BstSLI GKGCMC 1 cut(s) 22
Bsu36I CCTNAGG 1 cut(s) 275
BsuRI GGCC 2 cut(s) 143, 348
BtsIMutI CAGTG 1 cut(s) 13
Cfr13I GGNCC 1 cut(s) 271
CviJI RGCY 8 cut(s) 110, 143, 251, 262, 283, 348, 354, 363
CviKI_1 RGCY 8 cut(s) 110, 143, 251, 262, 283, 348, 354, 363
DdeI CTNAG 1 cut(s) 275
EaeI YGGCCR 2 cut(s) 141, 346
Eco47I GGWCC 1 cut(s) 271
Eco81I CCTNAGG 1 cut(s) 275
EcoO109I RGGNCCY 1 cut(s) 271
FaiI YATR 2 cut(s) 228, 255
FaqI GGGAC 1 cut(s) 30
HaeIII GGCC 2 cut(s) 143, 348
HapII CCGG 1 cut(s) 349
HindIII AAGCTT 2 cut(s) 249, 260
HinfI GANTC 1 cut(s) 218
HpaII CCGG 1 cut(s) 349
HphI GGTGA 1 cut(s) 183
Hpy166II GTNNAC 1 cut(s) 20
Hpy188III TCNNGA 2 cut(s) 238, 266
Hpy8I GTNNAC 1 cut(s) 20
Hpy99I CGWCG 1 cut(s) 213
HpyCH4III ACNGT 1 cut(s) 17
HpyCH4V TGCA 1 cut(s) 20
HpyF10VI GCNNNNNNNGC 1 cut(s) 360
HpyF3I CTNAG 1 cut(s) 275
LmnI GCTCC 1 cut(s) 351
LpnPI CCDG 1 cut(s) 362
MboII GAAGA 2 cut(s) 189, 192
MhlI GDGCHC 1 cut(s) 22
MluCI AATT 1 cut(s) 232
MlyI GAGTC 1 cut(s) 227
MmeI TCCRAC 2 cut(s) 246, 278
MnlI CCTC 7 cut(s) 45, 58, 76, 85, 134, 262, 273
MseI TTAA 1 cut(s) 6
MspI CCGG 1 cut(s) 349
MwoI GCNNNNNNNGC 1 cut(s) 360
PleI GAGTC 1 cut(s) 226
PpsI GAGTC 1 cut(s) 226
PpuMI RGGWCCY 1 cut(s) 271
Psp5II RGGWCCY 1 cut(s) 271
PspPI GGNCC 1 cut(s) 271
PspPPI RGGWCCY 1 cut(s) 271
SaqAI TTAA 1 cut(s) 6
Sau96I GGNCC 1 cut(s) 271
SchI GAGTC 1 cut(s) 227
SduI GDGCHC 1 cut(s) 22
SetI ASST 5 cut(s) 112, 253, 264, 273, 356
SinI GGWCC 1 cut(s) 271
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
Sse9I AATT 1 cut(s) 232
TaaI ACNGT 1 cut(s) 17
TaqI TCGA 1 cut(s) 208
TasI AATT 1 cut(s) 232
Tru1I TTAA 1 cut(s) 6
Tru9I TTAA 1 cut(s) 6
TscAI CASTG 1 cut(s) 20
TspDTI ATGAA 1 cut(s) 147
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 1 cut(s) 20
VneI GTGCAC 1 cut(s) 18
VpaK11BI GGWCC 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.