pycom15g14070

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
9595833 .. 9596159
327 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14070.2

Sequence Viewer

Length: 183 bp
ATGCCCACACCTATAGTTATAAACCACCTCGGAGACATTTCCCAATTTTTCGGCGAGCACCGCCCCTTTCGAGGCAATTTCCGGCCAAACCACGGCGAGTTGGCCGGCGTGCGAGTTTCCGGCGATCTCAGTGACTTTCGAGGTGTTTTCCAGCCAAACCACGGCGAGTTAGACGTCGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

6.68

Weight (kDa)

6.0

Isoelectric Point (pI)

14.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 20
AatII GACGTC 1 cut(s) 177
AciI CCGC 1 cut(s) 61
AcoI YGGCCR 2 cut(s) 83, 102
AcyI GRCGYC 1 cut(s) 174
AfiI CCNNNNNNNGG 3 cut(s) 71, 92, 161
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 1 cut(s) 27
AoxI GGCC 2 cut(s) 83, 102
Bbv12I GWGCWC 1 cut(s) 60
BceAI ACGGC 2 cut(s) 109, 178
BcoDI GTCTC 1 cut(s) 27
BfmI CTRYAG 1 cut(s) 12
BsaHI GRCGYC 1 cut(s) 174
BsaJI CCNNGG 3 cut(s) 28, 91, 160
Bsc4I CCNNNNNNNGG 3 cut(s) 71, 92, 161
Bse118I RCCGGY 1 cut(s) 104
BseDI CCNNGG 3 cut(s) 28, 91, 160
BseLI CCNNNNNNNGG 3 cut(s) 71, 92, 161
BseMII CTCAG 1 cut(s) 142
BshFI GGCC 2 cut(s) 85, 104
BsiHKAI GWGCWC 1 cut(s) 60
BsiSI CCGG 3 cut(s) 82, 105, 120
BslI CCNNNNNNNGG 3 cut(s) 71, 92, 161
BsmAI GTCTC 1 cut(s) 27
BsnI GGCC 2 cut(s) 85, 104
Bsp1286I GDGCHC 1 cut(s) 60
Bsp143I GATC 1 cut(s) 124
BspACI CCGC 1 cut(s) 61
BspANI GGCC 2 cut(s) 85, 104
BspCNI CTCAG 1 cut(s) 141
BsrFI RCCGGY 1 cut(s) 104
BssAI RCCGGY 1 cut(s) 104
BssECI CCNNGG 3 cut(s) 28, 91, 160
BssMI GATC 1 cut(s) 124
BssNI GRCGYC 1 cut(s) 174
BstACI GRCGYC 1 cut(s) 174
BstC8I GCNNGC 3 cut(s) 56, 106, 110
BstDEI CTNAG 1 cut(s) 128
BstDSI CCRYGG 2 cut(s) 91, 160
BstKTI GATC 1 cut(s) 127
BstMAI GTCTC 1 cut(s) 27
BstMBI GATC 1 cut(s) 124
BstMWI GCNNNNNNNGC 1 cut(s) 60
BstSFI CTRYAG 1 cut(s) 12
BsuRI GGCC 2 cut(s) 85, 104
BtgI CCRYGG 2 cut(s) 91, 160
BtsIMutI CAGTG 1 cut(s) 136
Cac8I GCNNGC 3 cut(s) 56, 106, 110
Cfr10I RCCGGY 1 cut(s) 104
CviJI RGCY 3 cut(s) 85, 104, 154
CviKI_1 RGCY 3 cut(s) 85, 104, 154
DdeI CTNAG 1 cut(s) 128
DpnI GATC 1 cut(s) 126
DpnII GATC 1 cut(s) 124
EaeI YGGCCR 2 cut(s) 83, 102
FaiI YATR 2 cut(s) 14, 20
HaeIII GGCC 2 cut(s) 85, 104
HapII CCGG 3 cut(s) 82, 105, 120
Hin1I GRCGYC 1 cut(s) 174
HpaII CCGG 3 cut(s) 82, 105, 120
Hpy188I TCNGA 1 cut(s) 32
Hpy99I CGWCG 1 cut(s) 179
HpyCH4IV ACGT 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 1 cut(s) 60
HpyF3I CTNAG 1 cut(s) 128
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 1 cut(s) 174
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
Kzo9I GATC 1 cut(s) 124
LpnPI CCDG 4 cut(s) 95, 118, 133, 164
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 1 cut(s) 131
MalI GATC 1 cut(s) 126
MboI GATC 1 cut(s) 124
MhlI GDGCHC 1 cut(s) 60
MluCI AATT 2 cut(s) 44, 76
MnlI CCTC 3 cut(s) 38, 65, 134
MroNI GCCGGC 1 cut(s) 104
MspI CCGG 3 cut(s) 82, 105, 120
MwoI GCNNNNNNNGC 1 cut(s) 60
NaeI GCCGGC 1 cut(s) 106
NdeII GATC 1 cut(s) 124
NgoMIV GCCGGC 1 cut(s) 104
NmuCI GTSAC 1 cut(s) 131
PdiI GCCGGC 1 cut(s) 106
PsiI TTATAA 1 cut(s) 20
Sau3AI GATC 1 cut(s) 124
SduI GDGCHC 1 cut(s) 60
SetI ASST 4 cut(s) 13, 30, 145, 177
SfcI CTRYAG 1 cut(s) 12
Sse9I AATT 2 cut(s) 44, 76
SsiI CCGC 1 cut(s) 61
TaiI ACGT 1 cut(s) 177
TaqI TCGA 2 cut(s) 70, 139
TasI AATT 2 cut(s) 44, 76
TscAI CASTG 1 cut(s) 136
TseFI GTSAC 1 cut(s) 131
Tsp45I GTSAC 1 cut(s) 131
TspRI CASTG 1 cut(s) 136
ZraI GACGTC 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.