MD11G1148000.v1.1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000521
Physical Location & Seq
Forward (+)
13964452 .. 13967815
3364 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1148000.v1.1.491

Sequence Viewer

Length: 1473 bp
ATGGATCCTGAAGTACAAACAGCGGGTCTCGAGTCACCCTTGATTCCAGTTCTTCCTCAAGAACTTGAAGTACAAAGAAAACAAGGACCGCTGAGCAAGGATGAGGTTATCAAGGAAGTAAAGAAGCAGCTTTTGTTGGCTGGGCCACTTGTGTCCTCAAATTTCTTGCTATTTGGTATGCAGGTGATTTCGGTCATGTATGTTGGTCACCTTGGAGAGCTGGCACTTGCAGGTGCTTCCATGGCCACTTCATTTGCTTCAGTCACTGGTTTGAGCTTGATAATAGGAATGGGGAGTGCATTAGACACATTCTGCGGCCAGTCCTATGGTGCAAAACAGTATCACATGCTTGGTATACACTTACAGAGAGCAATGCTTGTTCTTGGCCTGGTCTGCATTCCTTTGGCAACTGTATGGTTCAATGCTGGTCATATTCTTAAATTCTTGGGTCAAGATCCTGAAATAGCAGCTGCTGCTGGAAATTATGCTCGTTTCCTGATTCCATGTCTTTTTGCATATGCAATCCAACAATGTCATTCTAGATTTTTGCAAACTCAAAACAATGTGGTTCCCATGATTGCTAGCACAGGCACAGCAACGCTATTGCACTTGTTTCTCTGTTGGTTTCTGGTATACAAGACTAGCCTTGGATATAGAGGTGCGGCGTTGGCAAACTCCATCTCATATTGGATCAATGCATTGTTGTTAGTAATTTATGTTAGAGTCTCTCCCTCTTGTAAACACACATGGACTGGATTCTCAAAGGAGGCCTTCCGTGGAATTCCCGATTTTATAAAACTAGCTATTCCTTCTGCTGTAATGATCAGCTTGGAGATTTGGTCATTCGAATTGATGGTCCTCTTATCCGGTTTCCTTCCTAATCCAAAGCTAGAAACCTCAGTCCTCTCAATCAGCCTTAACACATGTTCAATGGTGTACATGATTCCAATGGCATTCAGTGGTACAGCAAGCACAAGGGTTTCAAATCAATTGGGTGCCAGTCAACCACGACTCGCAATTCTAGCAGTACGTGTTGCACTGTCCATTGTGGTTATTGAAGGCTTTTTGATCGGTGCTGTCCTGATATTGGGTCGAAAAGTTTGGGGCTACTGTTACAGCAATGAAACTGAAGTTGTGAATTATGTGGGAGAAATGTTGATTTTGGTTGCGGTATCTCACTTTTTTGATGGACTTCAATCTGTGCTTTCAGGGGTCATAAGAGGAAGTGGGCAGCAAAAGGTTGGGGCGTATGTTAATTTGGGAGCTTACTATTTTATGGGCATTCCTGTTGCAGTATTATTAGCTTTTGTCCTGCACATTGGAGGGAAGGGTCTTTGGACTGGAATTATCGTGGCTCTATTCGTGCAGGCACTATGTCTTTCGATCATAATCATATGCACAGATTGGGAGAAAGAAGTGAAGAACGCTTCTGACAGAGTGTACAACACAATGACCTCGGCTGATATGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

491

Amino Acids

53.13

Weight (kDa)

8.25

Isoelectric Point (pI)

25.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 49 - 208 8.7e-39 MatE
MatE PF01554 270 - 432 4.1e-23 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000521)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g09990 FvH4_4g09990 FvH4_4g09990 FvH4_4g09990 FvH4_7g32860 FvH4_7g32860 FvH4_7g32860 FvH4_7g32860
malus_domestica MD11G1148000.v1.1 MD13G1266200.v1.1 MD14G1231800.v1.1
prunus_persica Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1
pyrus_communis pycom13g23330
rosa_chinensis RchiOBHm_Chr4g0403401 RchiOBHm_Chr4g0403411 RchiOBHm_Chr4g0403421 RchiOBHm_Chr4g0403461 RchiOBHm_Chr4g0403631 RchiOBHm_Chr7g0223601 RchiOBHm_Chr7g0238161
rosa_laevigata RLG00000000937 RLG00000001957 RLG00000008965 RLG00000008975 RLG00000008976 RLG00000008978
rosa_multiflora Rmu_co8335743.1_g000001 Rmu_sc0005734.1_g000001 Rmu_sc0007727.1_g000011 Rmu_sc0011775.1_g000002 Rmu_sc0011775.1_g000005 Rmu_sc0028062.1_g000002
rosa_roxburghii Rroxscaffold_3G00223300 Rroxscaffold_5G00348050 Rroxscaffold_5G00348060 Rroxscaffold_5G00348120 Rroxscaffold_5G00348240
rosa_rugosa Rorug04G0042300 Rorug04G0042400 Rorug04G0042500 Rorug04G0042600.1 Rorug04G0042700 Rorug04G0042800 Rorug04G0042900 Rorug04G0043000 Rorug04G0043100 Rorug04G0043200 Rorug04G0043300 Rorug04G0043400 Rorug04G0044700 Rorug07G0310600 Rorug07G0310700 Rorug07G0310700
rosa_samantha Rh4AG118700 Rh4AG118800 Rh4AG118900 Rh4AG119000 Rh4BG111600 Rh4BG111800 Rh4BG111900 Rh4BG112900 Rh4CG126600 Rh4CG126900 Rh4CG127800 Rh4DG111300 Rh4DG111400 Rh4DG111500 Rh7AG466500 Rh7BG352200 Rh7BG436900 Rh7CG484200 Rh7DG452600
rosa_wichuraiana Rw4G009630 Rw4G009640 Rw4G009650 Rw4G009710 Rw7G038620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
AarI CACCTGC 2 cut(s) 172, 221
Acc36I ACCTGC 2 cut(s) 172, 221
AccB1I GGYRCC 1 cut(s) 995
AccI GTMKAC 2 cut(s) 355, 633
AciI CCGC 5 cut(s) 23, 89, 315, 662, 1169
AclWI GGATC 3 cut(s) 12, 449, 698
AcoI YGGCCR 2 cut(s) 243, 316
AcsI RAATTY 3 cut(s) 160, 440, 780
AcuI CTGAAG 3 cut(s) 30, 243, 1149
AfaI GTAC 6 cut(s) 15, 72, 938, 964, 1029, 1442
AfiI CCNNNNNNNGG 1 cut(s) 1087
AflIII ACRYGT 2 cut(s) 923, 1030
AgsI TTSAA 6 cut(s) 68, 421, 930, 984, 1058, 1196
AjnI CCWGG 1 cut(s) 387
AluBI AGCT 9 cut(s) 130, 220, 276, 470, 803, 828, 889, 1265, 1304
AluI AGCT 9 cut(s) 130, 220, 276, 470, 803, 828, 889, 1265, 1304
Alw26I GTCTC 2 cut(s) 32, 730
AlwI GGATC 3 cut(s) 12, 449, 698
AlwNI CAGNNNCTG 2 cut(s) 266, 473
Ama87I CYCGRG 1 cut(s) 29
AoxI GGCC 5 cut(s) 143, 243, 316, 385, 768
ApeKI GCWGC 5 cut(s) 127, 467, 470, 473, 1231
ApoI RAATTY 3 cut(s) 160, 440, 780
ArsI GACNNNNNNTTYG 4 cut(s) 10, 42, 840, 872
AspS9I GGNCC 3 cut(s) 86, 143, 856
AsuHPI GGTGA 3 cut(s) 27, 196, 200
AsuII TTCGAA 1 cut(s) 846
AsuNHI GCTAGC 1 cut(s) 581
AvaI CYCGRG 1 cut(s) 29
AvaII GGWCC 2 cut(s) 86, 856
BalI TGGCCA 1 cut(s) 245
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 995
BbvI GCAGC 5 cut(s) 139, 457, 460, 479, 1243
BccI CCATC 3 cut(s) 686, 847, 1181
BciT130I CCWGG 1 cut(s) 389
BclI TGATCA 1 cut(s) 822
BcoDI GTCTC 2 cut(s) 32, 730
BfaI CTAG 6 cut(s) 540, 582, 642, 800, 890, 1022
BfuAI ACCTGC 2 cut(s) 172, 221
BisI GCNGC 7 cut(s) 128, 316, 468, 471, 474, 663, 1232
BlpI GCTNAGC 1 cut(s) 92
BlsI GCNGC 7 cut(s) 129, 317, 469, 472, 475, 664, 1233
Bme1390I CCNGG 1 cut(s) 389
Bme18I GGWCC 2 cut(s) 86, 856
BmeT110I CYCGRG 1 cut(s) 29
BmgT120I GGNCC 3 cut(s) 86, 143, 856
BmiI GGNNCC 3 cut(s) 6, 570, 997
BmrFI CCNGG 1 cut(s) 389
BmtI GCTAGC 1 cut(s) 585
Bpu1102I GCTNAGC 1 cut(s) 92
Bpu14I TTCGAA 1 cut(s) 846
BpuEI CTTGAG 1 cut(s) 42
BsaAI YACGTR 1 cut(s) 1031
BsaBI GATNNNNATC 1 cut(s) 1388
BsaI GGTCTC 1 cut(s) 32
BsaJI CCNNGG 5 cut(s) 211, 240, 646, 775, 1455
BsaWI WCCGGW 1 cut(s) 866
BsaXI ACNNNNNCTCC 2 cut(s) 824, 854
Bsc4I CCNNNNNNNGG 1 cut(s) 1087
Bse1I ACTGG 6 cut(s) 47, 271, 319, 757, 999, 1345
Bse3DI GCAATG 2 cut(s) 378, 1126
Bse8I GATNNNNATC 1 cut(s) 1388
BseBI CCWGG 1 cut(s) 389
BseDI CCNNGG 5 cut(s) 211, 240, 646, 775, 1455
BseGI GGATG 1 cut(s) 106
BseJI GATNNNNATC 1 cut(s) 1388
BseLI CCNNNNNNNGG 1 cut(s) 1087
BseMI GCAATG 2 cut(s) 378, 1126
BseMII CTCAG 2 cut(s) 83, 912
BseNI ACTGG 6 cut(s) 47, 271, 319, 757, 999, 1345
BseXI GCAGC 5 cut(s) 139, 457, 460, 479, 1243
BseYI CCCAGC 1 cut(s) 140
BsgI GTGCAG 2 cut(s) 1298, 1385
BshFI GGCC 5 cut(s) 145, 245, 318, 387, 770
BshNI GGYRCC 1 cut(s) 995
BsiHKCI CYCGRG 1 cut(s) 29
BsiSI CCGG 1 cut(s) 867
BslI CCNNNNNNNGG 1 cut(s) 1087
BsmAI GTCTC 2 cut(s) 32, 730
BsmI GAATGC 3 cut(s) 396, 953, 1281
BsnI GGCC 5 cut(s) 145, 245, 318, 387, 770
Bso31I GGTCTC 1 cut(s) 32
BsoBI CYCGRG 1 cut(s) 29
Bsp119I TTCGAA 1 cut(s) 846
Bsp1407I TGTACA 2 cut(s) 936, 1440
Bsp143I GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
Bsp1720I GCTNAGC 1 cut(s) 92
Bsp19I CCATGG 1 cut(s) 240
BspACI CCGC 5 cut(s) 23, 89, 315, 662, 1169
BspANI GGCC 5 cut(s) 145, 245, 318, 387, 770
BspCNI CTCAG 2 cut(s) 84, 911
BspLI GGNNCC 3 cut(s) 6, 570, 997
BspMI ACCTGC 2 cut(s) 172, 221
BspOI GCTAGC 1 cut(s) 585
BspPI GGATC 3 cut(s) 12, 449, 698
BspT104I TTCGAA 1 cut(s) 846
BspT107I GGYRCC 1 cut(s) 995
BspTNI GGTCTC 1 cut(s) 32
BsrDI GCAATG 2 cut(s) 378, 1126
BsrGI TGTACA 2 cut(s) 936, 1440
BsrI ACTGG 6 cut(s) 47, 271, 319, 757, 999, 1345
BssECI CCNNGG 5 cut(s) 211, 240, 646, 775, 1455
BssMI GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
BssNAI GTATAC 2 cut(s) 356, 634
BssT1I CCWWGG 3 cut(s) 211, 240, 646
Bst1107I GTATAC 2 cut(s) 356, 634
Bst2UI CCWGG 1 cut(s) 389
Bst4CI ACNGT 4 cut(s) 339, 412, 1041, 1112
BstAPI GCANNNNNTGC 1 cut(s) 473
BstAUI TGTACA 2 cut(s) 936, 1440
BstBAI YACGTR 1 cut(s) 1031
BstBI TTCGAA 1 cut(s) 846
BstC8I GCNNGC 4 cut(s) 222, 583, 970, 1368
BstDEI CTNAG 2 cut(s) 92, 898
BstDSI CCRYGG 2 cut(s) 240, 775
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 1 cut(s) 106
BstKTI GATC 6 cut(s) 7, 457, 693, 825, 1071, 1386
BstMAI GTCTC 2 cut(s) 32, 730
BstMBI GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
BstMWI GCNNNNNNNGC 5 cut(s) 242, 393, 473, 668, 1022
BstNI CCWGG 1 cut(s) 389
BstNSI RCATGY 2 cut(s) 349, 927
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 1 cut(s) 387
BstV1I GCAGC 5 cut(s) 139, 457, 460, 479, 1243
BstX2I RGATCY 2 cut(s) 4, 454
BstXI CCANNNNNNTGG 1 cut(s) 326
BstYI RGATCY 2 cut(s) 4, 454
BstZ17I GTATAC 2 cut(s) 356, 634
BsuRI GGCC 5 cut(s) 145, 245, 318, 387, 770
BtgI CCRYGG 2 cut(s) 240, 775
BtsCI GGATG 1 cut(s) 106
BtsIMutI CAGTG 3 cut(s) 264, 964, 1037
BveI ACCTGC 2 cut(s) 172, 221
Cac8I GCNNGC 4 cut(s) 222, 583, 970, 1368
CaiI CAGNNNCTG 2 cut(s) 266, 473
Cfr13I GGNCC 3 cut(s) 86, 143, 856
Csp6I GTAC 6 cut(s) 14, 71, 937, 963, 1028, 1441
CspCI CAANNNNNGTGG 2 cut(s) 235, 270
CviAII CATG 8 cut(s) 196, 241, 346, 504, 574, 747, 924, 940
CviQI GTAC 6 cut(s) 14, 71, 937, 963, 1028, 1441
DdeI CTNAG 2 cut(s) 92, 898
DpnI GATC 6 cut(s) 6, 456, 692, 824, 1070, 1385
DpnII GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
EaeI YGGCCR 2 cut(s) 243, 316
Eco130I CCWWGG 3 cut(s) 211, 240, 646
Eco147I AGGCCT 1 cut(s) 770
Eco31I GGTCTC 1 cut(s) 32
Eco47I GGWCC 2 cut(s) 86, 856
Eco57I CTGAAG 3 cut(s) 30, 243, 1149
Eco88I CYCGRG 1 cut(s) 29
Eco91I GGTNACC 1 cut(s) 206
EcoO65I GGTNACC 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 780
EcoRII CCWGG 1 cut(s) 387
EcoT14I CCWWGG 3 cut(s) 211, 240, 646
EcoT22I ATGCAT 1 cut(s) 700
ErhI CCWWGG 3 cut(s) 211, 240, 646
FaeI CATG 8 cut(s) 199, 244, 349, 507, 577, 750, 927, 943
FalI AAGNNNNNCTT 2 cut(s) 755, 787
FatI CATG 8 cut(s) 195, 240, 345, 503, 573, 746, 923, 939
FauI CCCGC 1 cut(s) 16
FauNDI CATATG 2 cut(s) 517, 1394
FbaI TGATCA 1 cut(s) 822
FblI GTMKAC 2 cut(s) 355, 633
Fnu4HI GCNGC 7 cut(s) 128, 316, 468, 471, 474, 663, 1232
FokI GGATG 1 cut(s) 113
Fsp4HI GCNGC 7 cut(s) 128, 316, 468, 471, 474, 663, 1232
FspBI CTAG 6 cut(s) 540, 582, 642, 800, 890, 1022
GluI GCNGC 7 cut(s) 128, 316, 468, 471, 474, 663, 1232
GsaI CCCAGC 1 cut(s) 144
HaeIII GGCC 5 cut(s) 145, 245, 318, 387, 770
HapII CCGG 1 cut(s) 867
Hin1II CATG 8 cut(s) 199, 244, 349, 507, 577, 750, 927, 943
HincII GTYRAC 1 cut(s) 1004
HindII GTYRAC 1 cut(s) 1004
HinfI GANTC 7 cut(s) 32, 43, 499, 723, 756, 943, 1011
HpaII CCGG 1 cut(s) 867
HphI GGTGA 3 cut(s) 27, 196, 200
Hpy166II GTNNAC 6 cut(s) 356, 634, 740, 937, 1004, 1441
Hpy188I TCNGA 1 cut(s) 1432
Hpy188III TCNNGA 9 cut(s) 8, 29, 59, 452, 458, 496, 540, 785, 1081
Hpy8I GTNNAC 6 cut(s) 356, 634, 740, 937, 1004, 1441
HpyAV CCTTC 5 cut(s) 781, 819, 884, 1052, 1321
HpyCH4III ACNGT 4 cut(s) 339, 412, 1041, 1112
HpyCH4IV ACGT 1 cut(s) 1030
HpyF10VI GCNNNNNNNGC 5 cut(s) 242, 393, 473, 668, 1022
HpyF3I CTNAG 2 cut(s) 92, 898
HpySE526I ACGT 1 cut(s) 1030
Hsp92II CATG 8 cut(s) 199, 244, 349, 507, 577, 750, 927, 943
Ksp22I TGATCA 1 cut(s) 822
Kzo9I GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
LmnI GCTCC 1 cut(s) 1262
Lsp1109I GCAGC 5 cut(s) 139, 457, 460, 479, 1243
MaeI CTAG 6 cut(s) 540, 582, 642, 800, 890, 1022
MaeII ACGT 1 cut(s) 1030
MaeIII GTNAC 4 cut(s) 33, 206, 262, 1112
MalI GATC 6 cut(s) 6, 456, 692, 824, 1070, 1385
MboI GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
MboII GAAGA 2 cut(s) 44, 1432
MfeI CAATTG 1 cut(s) 989
MflI RGATCY 2 cut(s) 4, 454
MlsI TGGCCA 1 cut(s) 245
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 3 cut(s) 41, 732, 1005
MmeI TCCRAC 1 cut(s) 550
Mox20I TGGCCA 1 cut(s) 245
Mph1103I ATGCAT 1 cut(s) 700
MscI TGGCCA 1 cut(s) 245
MseI TTAA 3 cut(s) 438, 918, 1254
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 3 cut(s) 23, 91, 470
MspI CCGG 1 cut(s) 867
MspR9I CCNGG 1 cut(s) 389
MunI CAATTG 1 cut(s) 989
Mva1269I GAATGC 3 cut(s) 396, 953, 1281
MvaI CCWGG 1 cut(s) 389
MwoI GCNNNNNNNGC 5 cut(s) 242, 393, 473, 668, 1022
NcoI CCATGG 1 cut(s) 240
NdeI CATATG 2 cut(s) 517, 1394
NdeII GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
NheI GCTAGC 1 cut(s) 581
NlaIII CATG 8 cut(s) 199, 244, 349, 507, 577, 750, 927, 943
NlaIV GGNNCC 3 cut(s) 6, 570, 997
NmeAIII GCCGAG 1 cut(s) 1436
NmuCI GTSAC 3 cut(s) 33, 206, 262
NsiI ATGCAT 1 cut(s) 700
NspI RCATGY 2 cut(s) 349, 927
NspV TTCGAA 1 cut(s) 846
PaeR7I CTCGAG 1 cut(s) 29
PaqCI CACCTGC 2 cut(s) 172, 221
PceI AGGCCT 1 cut(s) 770
PciI ACATGT 1 cut(s) 923
PctI GAATGC 3 cut(s) 396, 953, 1281
PfeI GAWTC 4 cut(s) 43, 499, 756, 943
PkrI GCNGC 7 cut(s) 129, 317, 469, 472, 475, 664, 1233
PleI GAGTC 3 cut(s) 40, 731, 1005
PpsI GAGTC 3 cut(s) 40, 731, 1005
Ppu21I YACGTR 1 cut(s) 1031
PscI ACATGT 1 cut(s) 923
PsiI TTATAA 1 cut(s) 794
Psp6I CCWGG 1 cut(s) 387
PspEI GGTNACC 1 cut(s) 206
PspFI CCCAGC 1 cut(s) 140
PspGI CCWGG 1 cut(s) 387
PspN4I GGNNCC 3 cut(s) 6, 570, 997
PspPI GGNCC 3 cut(s) 86, 143, 856
PsrI GAACNNNNNNTAC 2 cut(s) 54, 86
PstNI CAGNNNCTG 2 cut(s) 266, 473
PsuI RGATCY 2 cut(s) 4, 454
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 6 cut(s) 15, 72, 938, 964, 1029, 1442
RsaNI GTAC 6 cut(s) 14, 71, 937, 963, 1028, 1441
SaqAI TTAA 3 cut(s) 438, 918, 1254
SatI GCNGC 7 cut(s) 128, 316, 468, 471, 474, 663, 1232
Sau3AI GATC 6 cut(s) 4, 454, 690, 822, 1068, 1383
Sau96I GGNCC 3 cut(s) 86, 143, 856
SchI GAGTC 3 cut(s) 41, 732, 1005
ScrFI CCNGG 1 cut(s) 389
Sfr274I CTCGAG 1 cut(s) 29
SfuI TTCGAA 1 cut(s) 846
SinI GGWCC 2 cut(s) 86, 856
SlaI CTCGAG 1 cut(s) 29
SmlI CTYRAG 2 cut(s) 29, 57
SmoI CTYRAG 2 cut(s) 29, 57
SseBI AGGCCT 1 cut(s) 770
SsiI CCGC 5 cut(s) 23, 89, 315, 662, 1169
SspMI CTAG 6 cut(s) 540, 582, 642, 800, 890, 1022
StuI AGGCCT 1 cut(s) 770
StyD4I CCNGG 1 cut(s) 387
StyI CCWWGG 3 cut(s) 211, 240, 646
TaaI ACNGT 4 cut(s) 339, 412, 1041, 1112
TaiI ACGT 1 cut(s) 1033
TaqI TCGA 4 cut(s) 30, 846, 1093, 1382
TaqII GACCGA 1 cut(s) 181
TatI WGTACW 4 cut(s) 13, 70, 936, 1440
TauI GCSGC 2 cut(s) 318, 665
TfiI GAWTC 4 cut(s) 43, 499, 756, 943
Tru1I TTAA 3 cut(s) 438, 918, 1254
Tru9I TTAA 3 cut(s) 438, 918, 1254
TscAI CASTG 3 cut(s) 271, 964, 1044
TseFI GTSAC 3 cut(s) 33, 206, 262
TseI GCWGC 5 cut(s) 127, 467, 470, 473, 1231
Tsp45I GTSAC 3 cut(s) 33, 206, 262
TspDTI ATGAA 2 cut(s) 240, 1137
TspGWI ACGGA 1 cut(s) 764
TspRI CASTG 3 cut(s) 271, 964, 1044
VpaK11BI GGWCC 2 cut(s) 86, 856
XapI RAATTY 3 cut(s) 160, 440, 780
XbaI TCTAGA 1 cut(s) 539
XceI RCATGY 2 cut(s) 349, 927
XhoI CTCGAG 1 cut(s) 29
XmiI GTMKAC 2 cut(s) 355, 633
XspI CTAG 6 cut(s) 540, 582, 642, 800, 890, 1022
Zsp2I ATGCAT 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.