Rorug04G0042700

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000521
Physical Location & Seq
Reverse (-)
6677275 .. 6679763
2489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0042700.1

Sequence Viewer

Length: 1785 bp
ATGGTTGCAGAGCTTTGGATATTGAAGATGGGTAACCAGGTAAGCTCGAATCTAAAGCATGCTCTTTTACTTCAGCATTCAAAGAAATCAAACCCAAAAGCCACACCCAATAACTCCAACACCAAAACCCAGAAGCAGACTATAGGGATTCTTTCATTTGAGGTAGCTAATGTTATGTCCAAGACTGTTTATTTACACAAGTCCCTCACAGACTCTGAGATCTCTAAGCTTAAAGTTGAGATCTTGAAGTCTGAGGGGGTCCAGAGGTTGGTCTCTTCTGATGAGGCCTATCTTCTTGAGCTTGCTTTGGCTGAGAAGCTTGAGGACCTGAACCGGGTCGCTGCGGTGGTGGCCCGGCTCGGCAAGAGGTGTGTTGAGCCGGCTCTGCAGGGTTTTGAGCATGTTTATGGTGACCTTGTTAATGGGGTTATTGAAGTTAGGGAGTTGGGGTTTTTGGTGAAGGATATGGAGGGGATGATTAGGAAGTTGGAGAGGTATGTGAATGCCACCTCCAATTTGTATAGTGAATTGGAGGTGTTGAATGAGTTGGAGCAAGCCACCAAGAAGTTTCAGAACAACCAACATGAGGAGAGCAAGAGGGCTTTTGAGCAGAAGCTGATTTGGCAGAAGCAAGATGTGAGGCATCTCAAGGACATTTCACTTTGGAACCAGACTTATGATAAGGTTGTGGAGTTGTTGGCAAGGACGGTGTGTACCATTTATGCTACGATTCGTGGGGTTTTCGGAGACTCTGGTTTGAGCAGGGACCATGGAGGGTCAATTGGTGGAGGTTCGCCTCCTCCTGTGTCTGGTCAGATTGATGCGAGGAGGGTTTCCCAGGAGCCATTGAAGAGGGTTCTTAGCAAGAAAAAAGGGTTTCATTCGGGGCCATTTGAGAAAGCTGTGGTGGTGAAAAAGGGGTCAAGTTTTAAGCCTCAGTTTGATTCAAGGAGAGGAGGTGAATTGGCGTTGTTTCGGGCAGAGGATTTCAACTTTCCCTGCGGAACTAGCCCAGGGAGGCTTTTCATGGACTGCCTAGTAAGCAGTTCGGTTGTTGATGATGATGATGTTGACAGTGCTGGTGGATATGAGGAACGGAGTAGCCAAACTTCAAGTTGTGGCTTGGCAAATGGTGGTTTGAGGAGAGATTACCCCAACCATTCAGGTTGTTTTAGTAGAGTGCAAATGGTTATGCAATCAAACTCCGGTGGAATGAATGGTGCCCCGTTTGGTCCCAAGAGTAGGCTGATGGTTTATGCTCCACCTTCTACTGTGGGAGGCTCTGCTCTAGCTTTGCATTATGCAAATGTCATAATTGTGGTAGAGAAGTTGCTTCGCTACCCTTATCTAGTGGGTGAGGAAGCCAGGGACGATTTGTATCATATGTTGCCAACGAGTTTAAGACTGTCTCTCAGGACTAATCTCAAGTCCTATGTCAAGAATTTGGCTATATATGATGCACCTCTTGCTCATGATTGGAAGGAGACTCTTGATGGGATATTGAGGTGGCTTGCCCCACTGGCACATAACATGATCAGATGGCAAAGTGAGCGTAATTTTGAGCAACAGCAAATTGTTACACGAACGCATGTTCTTCTGCTTCAGACATTGTATTTTGCTGATCGAAAGAAAACAGAGGCAGCAATTTGTCAGCTTCTTGTTGGGTTGAATTATATATGCCGTTATGAGCATCAGCAGAATGCATTATTGGATTGTGCAAGTAGTTTTGATTTTGAAGACTGCATGGAGTGGCAAATGCAATGTGGAGCTTCTTTTGTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

594

Amino Acids

66.57

Weight (kDa)

8.15

Isoelectric Point (pI)

44.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3475 PF11961 50 - 106 7.8e-25 Domain of unknown function (DUF3475)
DUF668 PF05003 424 - 513 6.4e-34 Protein of unknown function (DUF668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000521)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g09990 FvH4_4g09990 FvH4_4g09990 FvH4_4g09990 FvH4_7g32860 FvH4_7g32860 FvH4_7g32860 FvH4_7g32860
malus_domestica MD11G1148000.v1.1 MD13G1266200.v1.1 MD14G1231800.v1.1
prunus_persica Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1
pyrus_communis pycom13g23330
rosa_chinensis RchiOBHm_Chr4g0403401 RchiOBHm_Chr4g0403411 RchiOBHm_Chr4g0403421 RchiOBHm_Chr4g0403461 RchiOBHm_Chr4g0403631 RchiOBHm_Chr7g0223601 RchiOBHm_Chr7g0238161
rosa_laevigata RLG00000000937 RLG00000001957 RLG00000008965 RLG00000008975 RLG00000008976 RLG00000008978
rosa_multiflora Rmu_co8335743.1_g000001 Rmu_sc0005734.1_g000001 Rmu_sc0007727.1_g000011 Rmu_sc0011775.1_g000002 Rmu_sc0011775.1_g000005 Rmu_sc0028062.1_g000002
rosa_roxburghii Rroxscaffold_3G00223300 Rroxscaffold_5G00348050 Rroxscaffold_5G00348060 Rroxscaffold_5G00348120 Rroxscaffold_5G00348240
rosa_rugosa Rorug04G0042300 Rorug04G0042400 Rorug04G0042500 Rorug04G0042600.1 Rorug04G0042700 Rorug04G0042800 Rorug04G0042900 Rorug04G0043000 Rorug04G0043100 Rorug04G0043200 Rorug04G0043300 Rorug04G0043400 Rorug04G0044700 Rorug07G0310600 Rorug07G0310700 Rorug07G0310700
rosa_samantha Rh4AG118700 Rh4AG118800 Rh4AG118900 Rh4AG119000 Rh4BG111600 Rh4BG111800 Rh4BG111900 Rh4BG112900 Rh4CG126600 Rh4CG126900 Rh4CG127800 Rh4DG111300 Rh4DG111400 Rh4DG111500 Rh7AG466500 Rh7BG352200 Rh7BG436900 Rh7CG484200 Rh7DG452600
rosa_wichuraiana Rw4G009630 Rw4G009640 Rw4G009650 Rw4G009710 Rw7G038620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1220
AccB7I CCANNNNNTGG 1 cut(s) 268
AciI CCGC 2 cut(s) 344, 1002
AcsI RAATTY 1 cut(s) 1441
AcuI CTGAAG 2 cut(s) 56, 1586
AfaI GTAC 1 cut(s) 715
AfiI CCNNNNNNNGG 5 cut(s) 268, 334, 586, 809, 1242
AjnI CCWGG 4 cut(s) 36, 837, 1012, 1364
AjuI GAANNNNNNNTTGG 2 cut(s) 1691, 1723
Alw26I GTCTC 4 cut(s) 277, 741, 1413, 1478
AlwNI CAGNNNCTG 2 cut(s) 215, 616
AoxI GGCC 3 cut(s) 285, 351, 887
ApeKI GCWGC 2 cut(s) 341, 1640
ApoI RAATTY 1 cut(s) 1441
AspS9I GGNCC 6 cut(s) 259, 325, 352, 766, 887, 1232
AsuC2I CCSGG 2 cut(s) 335, 355
AsuHPI GGTGA 5 cut(s) 422, 469, 922, 971, 1367
AvaII GGWCC 4 cut(s) 259, 325, 766, 1232
BaeGI GKGCMC 1 cut(s) 1225
BanI GGYRCC 1 cut(s) 1220
BarI GAAGNNNNNNTAC 2 cut(s) 1093, 1125
BbsI GAAGAC 1 cut(s) 1743
BbvI GCAGC 2 cut(s) 328, 1652
BccI CCATC 4 cut(s) 22, 1243, 1487, 1533
BceAI ACGGC 1 cut(s) 1665
BciT130I CCWGG 4 cut(s) 38, 839, 1014, 1366
BclI TGATCA 1 cut(s) 1533
BcnI CCSGG 2 cut(s) 335, 355
BcoDI GTCTC 4 cut(s) 277, 741, 1413, 1478
BfaI CTAG 4 cut(s) 1008, 1037, 1289, 1349
BfmI CTRYAG 2 cut(s) 141, 386
BglI GCCNNNNNGGC 1 cut(s) 1520
BglII AGATCT 2 cut(s) 219, 240
BisI GCNGC 2 cut(s) 342, 1641
BlsI GCNGC 2 cut(s) 343, 1642
Bme1390I CCNGG 6 cut(s) 38, 335, 355, 839, 1014, 1366
Bme18I GGWCC 4 cut(s) 259, 325, 766, 1232
BmgT120I GGNCC 6 cut(s) 259, 325, 352, 766, 887, 1232
BmiI GGNNCC 7 cut(s) 260, 668, 767, 843, 888, 1222, 1234
BmrFI CCNGG 6 cut(s) 38, 335, 355, 839, 1014, 1366
BmsI GCATC 4 cut(s) 652, 811, 1447, 1699
BpiI GAAGAC 1 cut(s) 1743
BpuEI CTTGAG 4 cut(s) 317, 341, 632, 1409
BpuMI CCSGG 2 cut(s) 335, 355
BsaBI GATNNNNATC 1 cut(s) 1377
BsaI GGTCTC 1 cut(s) 277
BsaJI CCNNGG 5 cut(s) 769, 837, 1012, 1013, 1365
BsaWI WCCGGW 1 cut(s) 1205
BsaXI ACNNNNNCTCC 4 cut(s) 434, 464, 943, 973
Bsc4I CCNNNNNNNGG 5 cut(s) 268, 334, 586, 809, 1242
Bse118I RCCGGY 1 cut(s) 379
Bse1I ACTGG 1 cut(s) 1524
Bse3DI GCAATG 1 cut(s) 1766
Bse8I GATNNNNATC 1 cut(s) 1377
BseBI CCWGG 4 cut(s) 38, 839, 1014, 1366
BseDI CCNNGG 5 cut(s) 769, 837, 1012, 1013, 1365
BseGI GGATG 1 cut(s) 480
BseJI GATNNNNATC 1 cut(s) 1377
BseLI CCNNNNNNNGG 5 cut(s) 268, 334, 586, 809, 1242
BseMI GCAATG 1 cut(s) 1766
BseMII CTCAG 5 cut(s) 207, 243, 303, 950, 1426
BseNI ACTGG 1 cut(s) 1524
BseRI GAGGAG 5 cut(s) 602, 789, 841, 969, 1156
BseSI GKGCMC 1 cut(s) 1225
BseXI GCAGC 2 cut(s) 328, 1652
BshFI GGCC 3 cut(s) 287, 353, 889
BshNI GGYRCC 1 cut(s) 1220
BsiSI CCGG 4 cut(s) 334, 355, 380, 1206
BslFI GGGAC 4 cut(s) 187, 779, 1218, 1382
BslI CCNNNNNNNGG 5 cut(s) 268, 334, 586, 809, 1242
BsmAI GTCTC 4 cut(s) 277, 741, 1413, 1478
BsmFI GGGAC 4 cut(s) 187, 779, 1218, 1382
BsmI GAATGC 3 cut(s) 76, 508, 1705
BsnI GGCC 3 cut(s) 287, 353, 889
Bso31I GGTCTC 1 cut(s) 277
Bsp1286I GDGCHC 1 cut(s) 1225
Bsp143I GATC 4 cut(s) 219, 240, 1533, 1621
Bsp19I CCATGG 1 cut(s) 769
BspACI CCGC 2 cut(s) 344, 1002
BspANI GGCC 3 cut(s) 287, 353, 889
BspCNI CTCAG 5 cut(s) 208, 244, 304, 949, 1425
BspHI TCATGA 1 cut(s) 1471
BspLI GGNNCC 7 cut(s) 260, 668, 767, 843, 888, 1222, 1234
BspMAI CTGCAG 1 cut(s) 390
BspT107I GGYRCC 1 cut(s) 1220
BspTNI GGTCTC 1 cut(s) 277
BsrDI GCAATG 1 cut(s) 1766
BsrFI RCCGGY 1 cut(s) 379
BsrI ACTGG 1 cut(s) 1524
BssAI RCCGGY 1 cut(s) 379
BssECI CCNNGG 5 cut(s) 769, 837, 1012, 1013, 1365
BssMI GATC 4 cut(s) 219, 240, 1533, 1621
BssT1I CCWWGG 1 cut(s) 769
Bst2UI CCWGG 4 cut(s) 38, 839, 1014, 1366
Bst4CI ACNGT 5 cut(s) 187, 709, 1076, 1273, 1407
Bst6I CTCTTC 2 cut(s) 280, 845
BstAPI GCANNNNNTGC 1 cut(s) 1466
BstC8I GCNNGC 5 cut(s) 60, 303, 381, 555, 1512
BstDEI CTNAG 7 cut(s) 216, 225, 252, 312, 860, 936, 1412
BstDSI CCRYGG 1 cut(s) 769
BstEII GGTNACC 2 cut(s) 32, 410
BstF5I GGATG 1 cut(s) 480
BstKTI GATC 4 cut(s) 222, 243, 1536, 1624
BstMAI GTCTC 4 cut(s) 277, 741, 1413, 1478
BstMBI GATC 4 cut(s) 219, 240, 1533, 1621
BstMWI GCNNNNNNNGC 8 cut(s) 350, 385, 622, 1008, 1041, 1466, 1520, 1549
BstNI CCWGG 4 cut(s) 38, 839, 1014, 1366
BstNSI RCATGY 3 cut(s) 62, 404, 1592
BstPI GGTNACC 2 cut(s) 32, 410
BstSCI CCNGG 6 cut(s) 36, 333, 353, 837, 1012, 1364
BstSFI CTRYAG 2 cut(s) 141, 386
BstSLI GKGCMC 1 cut(s) 1225
BstV1I GCAGC 2 cut(s) 328, 1652
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 2 cut(s) 219, 240
BstYI RGATCY 2 cut(s) 219, 240
BsuRI GGCC 3 cut(s) 287, 353, 889
BtgI CCRYGG 1 cut(s) 769
BtsCI GGATG 1 cut(s) 480
BtsIMutI CAGTG 2 cut(s) 1081, 1517
Cac8I GCNNGC 5 cut(s) 60, 303, 381, 555, 1512
CaiI CAGNNNCTG 2 cut(s) 215, 616
CciI TCATGA 1 cut(s) 1471
Cfr10I RCCGGY 1 cut(s) 379
Cfr13I GGNCC 6 cut(s) 259, 325, 352, 766, 887, 1232
CsiI ACCWGGT 1 cut(s) 36
Csp6I GTAC 1 cut(s) 714
CviAII CATG 9 cut(s) 59, 401, 584, 770, 1027, 1472, 1531, 1589, 1744
CviQI GTAC 1 cut(s) 714
DdeI CTNAG 7 cut(s) 216, 225, 252, 312, 860, 936, 1412
DpnI GATC 4 cut(s) 221, 242, 1535, 1623
DpnII GATC 4 cut(s) 219, 240, 1533, 1621
Eam1104I CTCTTC 2 cut(s) 280, 845
EarI CTCTTC 2 cut(s) 280, 845
Eco130I CCWWGG 1 cut(s) 769
Eco147I AGGCCT 1 cut(s) 287
Eco31I GGTCTC 1 cut(s) 277
Eco47I GGWCC 4 cut(s) 259, 325, 766, 1232
Eco57I CTGAAG 2 cut(s) 56, 1586
Eco91I GGTNACC 2 cut(s) 32, 410
EcoO109I RGGNCCY 1 cut(s) 325
EcoO65I GGTNACC 2 cut(s) 32, 410
EcoRII CCWGG 4 cut(s) 36, 837, 1012, 1364
EcoT14I CCWWGG 1 cut(s) 769
EcoT22I ATGCAT 1 cut(s) 1705
ErhI CCWWGG 1 cut(s) 769
FaeI CATG 9 cut(s) 62, 404, 587, 773, 1030, 1475, 1534, 1592, 1747
FaqI GGGAC 4 cut(s) 187, 779, 1218, 1382
FatI CATG 9 cut(s) 58, 400, 583, 769, 1026, 1471, 1530, 1588, 1743
FauNDI CATATG 1 cut(s) 1383
FbaI TGATCA 1 cut(s) 1533
Fnu4HI GCNGC 2 cut(s) 342, 1641
FokI GGATG 1 cut(s) 487
Fsp4HI GCNGC 2 cut(s) 342, 1641
FspBI CTAG 4 cut(s) 1008, 1037, 1289, 1349
GluI GCNGC 2 cut(s) 342, 1641
HaeIII GGCC 3 cut(s) 287, 353, 889
HapII CCGG 4 cut(s) 334, 355, 380, 1206
Hin1II CATG 9 cut(s) 62, 404, 587, 773, 1030, 1475, 1534, 1592, 1747
HincII GTYRAC 1 cut(s) 1072
HindII GTYRAC 1 cut(s) 1072
HindIII AAGCTT 2 cut(s) 227, 317
HinfI GANTC 7 cut(s) 49, 148, 212, 730, 749, 944, 1486
HpaII CCGG 4 cut(s) 334, 355, 380, 1206
HphI GGTGA 5 cut(s) 422, 469, 922, 971, 1367
Hpy166II GTNNAC 2 cut(s) 714, 1072
Hpy188I TCNGA 8 cut(s) 217, 253, 280, 573, 746, 816, 1538, 1605
Hpy188III TCNNGA 7 cut(s) 244, 262, 296, 1414, 1438, 1472, 1490
Hpy8I GTNNAC 2 cut(s) 714, 1072
HpyAV CCTTC 3 cut(s) 454, 1275, 1474
HpyCH4III ACNGT 5 cut(s) 187, 709, 1076, 1273, 1407
HpyF10VI GCNNNNNNNGC 8 cut(s) 350, 385, 622, 1008, 1041, 1466, 1520, 1549
HpyF3I CTNAG 7 cut(s) 216, 225, 252, 312, 860, 936, 1412
Hsp92II CATG 9 cut(s) 62, 404, 587, 773, 1030, 1475, 1534, 1592, 1747
KroI GCCGGC 1 cut(s) 379
KroNI GCCGGC 1 cut(s) 381
Ksp22I TGATCA 1 cut(s) 1533
Kzo9I GATC 4 cut(s) 219, 240, 1533, 1621
LmnI GCTCC 4 cut(s) 550, 841, 1264, 1766
Lsp1109I GCAGC 2 cut(s) 328, 1652
LweI GCATC 4 cut(s) 652, 811, 1447, 1699
MabI ACCWGGT 1 cut(s) 36
MaeI CTAG 4 cut(s) 1008, 1037, 1289, 1349
MaeIII GTNAC 3 cut(s) 32, 410, 1576
MalI GATC 4 cut(s) 221, 242, 1535, 1623
MboI GATC 4 cut(s) 219, 240, 1533, 1621
MboII GAAGA 6 cut(s) 37, 267, 284, 862, 1586, 1748
MfeI CAATTG 1 cut(s) 780
MflI RGATCY 2 cut(s) 219, 240
MhlI GDGCHC 1 cut(s) 1225
MlyI GAGTC 3 cut(s) 206, 743, 1480
MmeI TCCRAC 3 cut(s) 141, 468, 528
Mph1103I ATGCAT 1 cut(s) 1705
MroNI GCCGGC 1 cut(s) 379
MseI TTAA 4 cut(s) 231, 420, 930, 1400
MslI CAYNNNNRTG 2 cut(s) 405, 1316
MspI CCGG 4 cut(s) 334, 355, 380, 1206
MspR9I CCNGG 6 cut(s) 38, 335, 355, 839, 1014, 1366
MunI CAATTG 1 cut(s) 780
Mva1269I GAATGC 3 cut(s) 76, 508, 1705
MvaI CCWGG 4 cut(s) 38, 839, 1014, 1366
MwoI GCNNNNNNNGC 8 cut(s) 350, 385, 622, 1008, 1041, 1466, 1520, 1549
NaeI GCCGGC 1 cut(s) 381
NciI CCSGG 2 cut(s) 335, 355
NcoI CCATGG 1 cut(s) 769
NdeI CATATG 1 cut(s) 1383
NdeII GATC 4 cut(s) 219, 240, 1533, 1621
NgoMIV GCCGGC 1 cut(s) 379
NlaIII CATG 9 cut(s) 62, 404, 587, 773, 1030, 1475, 1534, 1592, 1747
NlaIV GGNNCC 7 cut(s) 260, 668, 767, 843, 888, 1222, 1234
NmeAIII GCCGAG 1 cut(s) 339
NmuCI GTSAC 1 cut(s) 410
NsiI ATGCAT 1 cut(s) 1705
NspI RCATGY 3 cut(s) 62, 404, 1592
PaeI GCATGC 1 cut(s) 62
PagI TCATGA 1 cut(s) 1471
PasI CCCWGGG 1 cut(s) 1013
PceI AGGCCT 1 cut(s) 287
PctI GAATGC 3 cut(s) 76, 508, 1705
PdiI GCCGGC 1 cut(s) 381
PfeI GAWTC 4 cut(s) 49, 148, 730, 944
PflMI CCANNNNNTGG 1 cut(s) 268
PkrI GCNGC 2 cut(s) 343, 1642
PleI GAGTC 3 cut(s) 206, 743, 1480
PpsI GAGTC 3 cut(s) 206, 743, 1480
PpuMI RGGWCCY 1 cut(s) 325
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 4 cut(s) 36, 837, 1012, 1364
PspEI GGTNACC 2 cut(s) 32, 410
PspGI CCWGG 4 cut(s) 36, 837, 1012, 1364
PspN4I GGNNCC 7 cut(s) 260, 668, 767, 843, 888, 1222, 1234
PspPI GGNCC 6 cut(s) 259, 325, 352, 766, 887, 1232
PspPPI RGGWCCY 1 cut(s) 325
PstI CTGCAG 1 cut(s) 390
PstNI CAGNNNCTG 2 cut(s) 215, 616
PsuI RGATCY 2 cut(s) 219, 240
RsaI GTAC 1 cut(s) 715
RsaNI GTAC 1 cut(s) 714
RseI CAYNNNNRTG 2 cut(s) 405, 1316
SaqAI TTAA 4 cut(s) 231, 420, 930, 1400
SatI GCNGC 2 cut(s) 342, 1641
Sau3AI GATC 4 cut(s) 219, 240, 1533, 1621
Sau96I GGNCC 6 cut(s) 259, 325, 352, 766, 887, 1232
SchI GAGTC 3 cut(s) 206, 743, 1480
ScrFI CCNGG 6 cut(s) 38, 335, 355, 839, 1014, 1366
SduI GDGCHC 1 cut(s) 1225
SexAI ACCWGGT 1 cut(s) 36
SfaNI GCATC 4 cut(s) 652, 811, 1447, 1699
SfcI CTRYAG 2 cut(s) 141, 386
SinI GGWCC 4 cut(s) 259, 325, 766, 1232
SmiMI CAYNNNNRTG 2 cut(s) 405, 1316
SmlI CTYRAG 4 cut(s) 296, 320, 647, 1424
SmoI CTYRAG 4 cut(s) 296, 320, 647, 1424
SphI GCATGC 1 cut(s) 62
SseBI AGGCCT 1 cut(s) 287
SsiI CCGC 2 cut(s) 344, 1002
SspMI CTAG 4 cut(s) 1008, 1037, 1289, 1349
StuI AGGCCT 1 cut(s) 287
StyD4I CCNGG 6 cut(s) 36, 333, 353, 837, 1012, 1364
StyI CCWWGG 1 cut(s) 769
TaaI ACNGT 5 cut(s) 187, 709, 1076, 1273, 1407
TaqI TCGA 2 cut(s) 47, 1624
TfiI GAWTC 4 cut(s) 49, 148, 730, 944
Tru1I TTAA 4 cut(s) 231, 420, 930, 1400
Tru9I TTAA 4 cut(s) 231, 420, 930, 1400
TscAI CASTG 2 cut(s) 1081, 1524
TseFI GTSAC 1 cut(s) 410
TseI GCWGC 2 cut(s) 341, 1640
Tsp45I GTSAC 1 cut(s) 410
TspDTI ATGAA 4 cut(s) 144, 869, 1015, 1229
TspGWI ACGGA 1 cut(s) 1111
TspRI CASTG 2 cut(s) 1081, 1524
Van91I CCANNNNNTGG 1 cut(s) 268
VpaK11BI GGWCC 4 cut(s) 259, 325, 766, 1232
XapI RAATTY 1 cut(s) 1441
XceI RCATGY 3 cut(s) 62, 404, 1592
XspI CTAG 4 cut(s) 1008, 1037, 1289, 1349
Zsp2I ATGCAT 1 cut(s) 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.