Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HIRAN | PF08797 | 109 - 200 | 8.1e-12 | HIRAN domain |
| SNF2-rel_dom | PF00176 | 298 - 654 | 4e-55 | SNF2-related domain |
| zf-RING_UBOX | PF13445 | 710 - 741 | 4.5e-07 | RING-type zinc-finger |
| zf-C3HC4_2 | PF13923 | 710 - 735 | 1.4e-06 | Zinc finger, C3HC4 type (RING finger) |
| Helicase_C | PF00271 | 794 - 903 | 3.4e-10 | Helicase conserved C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 2232 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1879 |
| AccI | GTMKAC | 1 cut(s) | 764 |
| AccIII | TCCGGA | 1 cut(s) | 199 |
| AciI | CCGC | 8 cut(s) | 100, 176, 323, 344, 544, 627, 1976, 2673 |
| AclWI | GGATC | 7 cut(s) | 1196, 1495, 1673, 2150, 2466, 2648, 2661 |
| AcoI | YGGCCR | 1 cut(s) | 84 |
| AcsI | RAATTY | 9 cut(s) | 75, 161, 277, 412, 517, 563, 923, 1086, 2397 |
| AcuI | CTGAAG | 6 cut(s) | 1476, 1836, 2387, 2539, 2628, 2762 |
| AcvI | CACGTG | 1 cut(s) | 16 |
| AcyI | GRCGYC | 1 cut(s) | 1661 |
| AdeI | CACNNNGTG | 1 cut(s) | 2174 |
| AfaI | GTAC | 3 cut(s) | 868, 1263, 2163 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1082, 1157, 1235, 1879 |
| AflII | CTTAAG | 1 cut(s) | 1568 |
| AflIII | ACRYGT | 3 cut(s) | 13, 1026, 2080 |
| AgsI | TTSAA | 9 cut(s) | 298, 621, 688, 847, 1793, 2030, 2373, 2383, 2548 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2518 |
| AhlI | ACTAGT | 1 cut(s) | 353 |
| AjnI | CCWGG | 3 cut(s) | 1440, 2265, 2328 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 423, 455, 1902, 1934 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2186, 2218 |
| Alw21I | GWGCWC | 4 cut(s) | 116, 907, 1467, 2301 |
| Alw26I | GTCTC | 3 cut(s) | 262, 774, 2212 |
| AlwI | GGATC | 7 cut(s) | 1196, 1495, 1673, 2150, 2466, 2648, 2661 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2414 |
| Ama87I | CYCGRG | 1 cut(s) | 1265 |
| Aor13HI | TCCGGA | 1 cut(s) | 199 |
| AoxI | GGCC | 6 cut(s) | 84, 210, 981, 1715, 2444, 2835 |
| ApeKI | GCWGC | 6 cut(s) | 629, 827, 1508, 1517, 2630, 2791 |
| ApoI | RAATTY | 9 cut(s) | 75, 161, 277, 412, 517, 563, 923, 1086, 2397 |
| AseI | ATTAAT | 2 cut(s) | 1652, 2256 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1028, 2397, 2552, 2811 |
| AspLEI | GCGC | 1 cut(s) | 1282 |
| AspS9I | GGNCC | 2 cut(s) | 2835, 2848 |
| AsuC2I | CCSGG | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 4 cut(s) | 62, 670, 1366, 1688 |
| AvaI | CYCGRG | 1 cut(s) | 1265 |
| AvaII | GGWCC | 1 cut(s) | 2848 |
| BamHI | GGATCC | 1 cut(s) | 2653 |
| BanI | GGYRCC | 1 cut(s) | 2232 |
| BanII | GRGCYC | 5 cut(s) | 57, 116, 124, 907, 2301 |
| BauI | CACGAG | 1 cut(s) | 109 |
| BbrPI | CACGTG | 1 cut(s) | 16 |
| BbsI | GAAGAC | 4 cut(s) | 636, 1121, 1590, 2352 |
| Bbv12I | GWGCWC | 4 cut(s) | 116, 907, 1467, 2301 |
| BbvI | GCAGC | 6 cut(s) | 616, 814, 1495, 1504, 2642, 2803 |
| BceAI | ACGGC | 3 cut(s) | 71, 99, 719 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2609, 2643 |
| BciT130I | CCWGG | 3 cut(s) | 1442, 2267, 2330 |
| BciVI | GTATCC | 1 cut(s) | 2114 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BcnI | CCSGG | 1 cut(s) | 118 |
| BcoDI | GTCTC | 3 cut(s) | 262, 774, 2212 |
| BcuI | ACTAGT | 1 cut(s) | 353 |
| BfaI | CTAG | 5 cut(s) | 354, 1091, 1257, 2016, 2784 |
| BfmI | CTRYAG | 1 cut(s) | 828 |
| BfrI | CTTAAG | 1 cut(s) | 1568 |
| BfuI | GTATCC | 1 cut(s) | 2114 |
| BglII | AGATCT | 1 cut(s) | 2469 |
| BisI | GCNGC | 6 cut(s) | 630, 828, 1509, 1518, 2631, 2792 |
| BlsI | GCNGC | 6 cut(s) | 631, 829, 1510, 1519, 2632, 2793 |
| BmcAI | AGTACT | 1 cut(s) | 868 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 1442, 2267, 2330 |
| Bme18I | GGWCC | 1 cut(s) | 2848 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2518 |
| BmeT110I | CYCGRG | 1 cut(s) | 1265 |
| BmgT120I | GGNCC | 2 cut(s) | 2835, 2848 |
| BmiI | GGNNCC | 4 cut(s) | 204, 1561, 2234, 2655 |
| BmrFI | CCNGG | 4 cut(s) | 118, 1442, 2267, 2330 |
| BmrI | ACTGGG | 2 cut(s) | 1118, 1642 |
| BmsI | GCATC | 6 cut(s) | 567, 823, 1087, 1828, 2436, 2642 |
| BmuI | ACTGGG | 2 cut(s) | 1118, 1642 |
| BpiI | GAAGAC | 4 cut(s) | 636, 1121, 1590, 2352 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1512 |
| BpuEI | CTTGAG | 2 cut(s) | 857, 2227 |
| BpuMI | CCSGG | 1 cut(s) | 118 |
| Bsa29I | ATCGAT | 1 cut(s) | 2830 |
| BsaAI | YACGTR | 2 cut(s) | 16, 1416 |
| BsaBI | GATNNNNATC | 2 cut(s) | 666, 2514 |
| BsaHI | GRCGYC | 1 cut(s) | 1661 |
| BsaI | GGTCTC | 1 cut(s) | 262 |
| BsaJI | CCNNGG | 9 cut(s) | 117, 538, 1151, 1350, 1622, 1918, 2239, 2657, 2676 |
| BsaWI | WCCGGW | 1 cut(s) | 199 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 98, 128, 891, 921, 2079, 2109, 2186, 2216 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1082, 1157, 1235, 1879 |
| Bse1I | ACTGG | 6 cut(s) | 252, 1113, 1454, 1637, 1873, 2354 |
| Bse3DI | GCAATG | 3 cut(s) | 816, 1107, 1537 |
| Bse8I | GATNNNNATC | 2 cut(s) | 666, 2514 |
| BseAI | TCCGGA | 1 cut(s) | 199 |
| BseBI | CCWGG | 3 cut(s) | 1442, 2267, 2330 |
| BseCI | ATCGAT | 1 cut(s) | 2830 |
| BseDI | CCNNGG | 9 cut(s) | 117, 538, 1151, 1350, 1622, 1918, 2239, 2657, 2676 |
| BseGI | GGATG | 6 cut(s) | 292, 733, 921, 967, 1338, 2289 |
| BseJI | GATNNNNATC | 2 cut(s) | 666, 2514 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1082, 1157, 1235, 1879 |
| BseMI | GCAATG | 3 cut(s) | 816, 1107, 1537 |
| BseMII | CTCAG | 4 cut(s) | 287, 875, 1047, 2286 |
| BseNI | ACTGG | 6 cut(s) | 252, 1113, 1454, 1637, 1873, 2354 |
| BseRI | GAGGAG | 1 cut(s) | 2693 |
| BseX3I | CGGCCG | 1 cut(s) | 84 |
| BseXI | GCAGC | 6 cut(s) | 616, 814, 1495, 1504, 2642, 2803 |
| BseYI | CCCAGC | 1 cut(s) | 975 |
| BsgI | GTGCAG | 2 cut(s) | 2209, 2649 |
| Bsh1285I | CGRYCG | 1 cut(s) | 87 |
| BshFI | GGCC | 6 cut(s) | 86, 212, 983, 1717, 2446, 2837 |
| BshNI | GGYRCC | 1 cut(s) | 2232 |
| BshVI | ATCGAT | 1 cut(s) | 2830 |
| BsiEI | CGRYCG | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 4 cut(s) | 116, 907, 1467, 2301 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1265 |
| BsiSI | CCGG | 3 cut(s) | 117, 200, 308 |
| BslFI | GGGAC | 3 cut(s) | 20, 1119, 2115 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1082, 1157, 1235, 1879 |
| BsmAI | GTCTC | 3 cut(s) | 262, 774, 2212 |
| BsmBI | CGTCTC | 1 cut(s) | 774 |
| BsmFI | GGGAC | 3 cut(s) | 20, 1119, 2115 |
| BsnI | GGCC | 6 cut(s) | 86, 212, 983, 1717, 2446, 2837 |
| Bso31I | GGTCTC | 1 cut(s) | 262 |
| BsoBI | CYCGRG | 1 cut(s) | 1265 |
| Bsp1286I | GDGCHC | 6 cut(s) | 57, 116, 124, 907, 1467, 2301 |
| Bsp13I | TCCGGA | 1 cut(s) | 199 |
| Bsp19I | CCATGG | 2 cut(s) | 1622, 2657 |
| BspACI | CCGC | 8 cut(s) | 100, 176, 323, 344, 544, 627, 1976, 2673 |
| BspANI | GGCC | 6 cut(s) | 86, 212, 983, 1717, 2446, 2837 |
| BspCNI | CTCAG | 4 cut(s) | 286, 876, 1046, 2287 |
| BspDI | ATCGAT | 1 cut(s) | 2830 |
| BspEI | TCCGGA | 1 cut(s) | 199 |
| BspHI | TCATGA | 1 cut(s) | 2038 |
| BspLI | GGNNCC | 4 cut(s) | 204, 1561, 2234, 2655 |
| BspMAI | CTGCAG | 1 cut(s) | 832 |
| BspPI | GGATC | 7 cut(s) | 1196, 1495, 1673, 2150, 2466, 2648, 2661 |
| BspT107I | GGYRCC | 1 cut(s) | 2232 |
| BspTI | CTTAAG | 1 cut(s) | 1568 |
| BspTNI | GGTCTC | 1 cut(s) | 262 |
| BsrDI | GCAATG | 3 cut(s) | 816, 1107, 1537 |
| BsrI | ACTGG | 6 cut(s) | 252, 1113, 1454, 1637, 1873, 2354 |
| BssECI | CCNNGG | 9 cut(s) | 117, 538, 1151, 1350, 1622, 1918, 2239, 2657, 2676 |
| BssNAI | GTATAC | 1 cut(s) | 765 |
| BssNI | GRCGYC | 1 cut(s) | 1661 |
| BssSI | CACGAG | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 6 cut(s) | 538, 1151, 1622, 1918, 2239, 2657 |
| Bst1107I | GTATAC | 1 cut(s) | 765 |
| Bst2BI | CACGAG | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 3 cut(s) | 1442, 2267, 2330 |
| Bst4CI | ACNGT | 9 cut(s) | 94, 242, 762, 1120, 1430, 2125, 2324, 2725, 2755 |
| Bst6I | CTCTTC | 3 cut(s) | 969, 1184, 2474 |
| BstACI | GRCGYC | 1 cut(s) | 1661 |
| BstAFI | CTTAAG | 1 cut(s) | 1568 |
| BstBAI | YACGTR | 2 cut(s) | 16, 1416 |
| BstC8I | GCNNGC | 4 cut(s) | 124, 1639, 2013, 2768 |
| BstDEI | CTNAG | 6 cut(s) | 273, 884, 1033, 1512, 2295, 2364 |
| BstDSI | CCRYGG | 3 cut(s) | 1350, 1622, 2657 |
| BstF5I | GGATG | 6 cut(s) | 292, 733, 921, 967, 1338, 2289 |
| BstHHI | GCGC | 1 cut(s) | 1282 |
| BstMAI | GTCTC | 3 cut(s) | 262, 774, 2212 |
| BstMCI | CGRYCG | 1 cut(s) | 87 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 827, 833, 1505, 1514, 1517, 1618, 2145 |
| BstNI | CCWGG | 3 cut(s) | 1442, 2267, 2330 |
| BstNSI | RCATGY | 5 cut(s) | 1030, 1616, 1641, 2084, 2770 |
| BstSCI | CCNGG | 4 cut(s) | 116, 1440, 2265, 2328 |
| BstSFI | CTRYAG | 1 cut(s) | 828 |
| BstSNI | TACGTA | 1 cut(s) | 1416 |
| BstV1I | GCAGC | 6 cut(s) | 616, 814, 1495, 1504, 2642, 2803 |
| BstV2I | GAAGAC | 4 cut(s) | 636, 1121, 1590, 2352 |
| BstX2I | RGATCY | 5 cut(s) | 1201, 1487, 2458, 2469, 2653 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 489, 2114 |
| BstYI | RGATCY | 5 cut(s) | 1201, 1487, 2458, 2469, 2653 |
| BstZ17I | GTATAC | 1 cut(s) | 765 |
| BstZI | CGGCCG | 1 cut(s) | 84 |
| Bsu15I | ATCGAT | 1 cut(s) | 2830 |
| BsuI | GTATCC | 1 cut(s) | 2114 |
| BsuRI | GGCC | 6 cut(s) | 86, 212, 983, 1717, 2446, 2837 |
| BsuTUI | ATCGAT | 1 cut(s) | 2830 |
| BtgI | CCRYGG | 3 cut(s) | 1350, 1622, 2657 |
| BtsCI | GGATG | 6 cut(s) | 292, 733, 921, 967, 1338, 2289 |
| BtsI | GCAGTG | 1 cut(s) | 1949 |
| BtsIMutI | CAGTG | 7 cut(s) | 261, 804, 1435, 1949, 2130, 2447, 2760 |
| Cac8I | GCNNGC | 4 cut(s) | 124, 1639, 2013, 2768 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2414 |
| CciI | TCATGA | 1 cut(s) | 2038 |
| CfoI | GCGC | 1 cut(s) | 1282 |
| Cfr13I | GGNCC | 2 cut(s) | 2835, 2848 |
| ClaI | ATCGAT | 1 cut(s) | 2830 |
| CseI | GACGC | 1 cut(s) | 1669 |
| CsiI | ACCWGGT | 1 cut(s) | 1440 |
| Csp6I | GTAC | 3 cut(s) | 867, 1262, 2162 |
| CviQI | GTAC | 3 cut(s) | 867, 1262, 2162 |
| DdeI | CTNAG | 6 cut(s) | 273, 884, 1033, 1512, 2295, 2364 |
| DraIII | CACNNNGTG | 1 cut(s) | 2174 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2518 |
| EaeI | YGGCCR | 1 cut(s) | 84 |
| EagI | CGGCCG | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 3 cut(s) | 969, 1184, 2474 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2518 |
| EarI | CTCTTC | 3 cut(s) | 969, 1184, 2474 |
| Ecl136II | GAGCTC | 3 cut(s) | 114, 905, 2299 |
| EclXI | CGGCCG | 1 cut(s) | 84 |
| Eco105I | TACGTA | 1 cut(s) | 1416 |
| Eco130I | CCWWGG | 6 cut(s) | 538, 1151, 1622, 1918, 2239, 2657 |
| Eco147I | AGGCCT | 1 cut(s) | 983 |
| Eco24I | GRGCYC | 5 cut(s) | 57, 116, 124, 907, 2301 |
| Eco31I | GGTCTC | 1 cut(s) | 262 |
| Eco32I | GATATC | 1 cut(s) | 586 |
| Eco47I | GGWCC | 1 cut(s) | 2848 |
| Eco52I | CGGCCG | 1 cut(s) | 84 |
| Eco53kI | GAGCTC | 3 cut(s) | 114, 905, 2299 |
| Eco57I | CTGAAG | 6 cut(s) | 1476, 1836, 2387, 2539, 2628, 2762 |
| Eco72I | CACGTG | 1 cut(s) | 16 |
| Eco88I | CYCGRG | 1 cut(s) | 1265 |
| EcoICRI | GAGCTC | 3 cut(s) | 114, 905, 2299 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2848 |
| EcoRI | GAATTC | 2 cut(s) | 517, 1086 |
| EcoRII | CCWGG | 3 cut(s) | 1440, 2265, 2328 |
| EcoRV | GATATC | 1 cut(s) | 586 |
| EcoT14I | CCWWGG | 6 cut(s) | 538, 1151, 1622, 1918, 2239, 2657 |
| EcoT38I | GRGCYC | 5 cut(s) | 57, 116, 124, 907, 2301 |
| ErhI | CCWWGG | 6 cut(s) | 538, 1151, 1622, 1918, 2239, 2657 |
| Esp3I | CGTCTC | 1 cut(s) | 774 |
| FaqI | GGGAC | 3 cut(s) | 20, 1119, 2115 |
| FauI | CCCGC | 2 cut(s) | 316, 2680 |
| FauNDI | CATATG | 2 cut(s) | 2135, 2152 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| FblI | GTMKAC | 1 cut(s) | 764 |
| Fnu4HI | GCNGC | 6 cut(s) | 630, 828, 1509, 1518, 2631, 2792 |
| FokI | GGATG | 6 cut(s) | 299, 740, 928, 954, 1345, 2296 |
| FriOI | GRGCYC | 5 cut(s) | 57, 116, 124, 907, 2301 |
| Fsp4HI | GCNGC | 6 cut(s) | 630, 828, 1509, 1518, 2631, 2792 |
| FspBI | CTAG | 5 cut(s) | 354, 1091, 1257, 2016, 2784 |
| GlaI | GCGC | 1 cut(s) | 1281 |
| GluI | GCNGC | 6 cut(s) | 630, 828, 1509, 1518, 2631, 2792 |
| GsaI | CCCAGC | 1 cut(s) | 979 |
| HaeIII | GGCC | 6 cut(s) | 86, 212, 983, 1717, 2446, 2837 |
| HapII | CCGG | 3 cut(s) | 117, 200, 308 |
| HgaI | GACGC | 1 cut(s) | 1669 |
| HhaI | GCGC | 1 cut(s) | 1282 |
| Hin1I | GRCGYC | 1 cut(s) | 1661 |
| Hin6I | GCGC | 1 cut(s) | 1280 |
| HinP1I | GCGC | 1 cut(s) | 1280 |
| HincII | GTYRAC | 2 cut(s) | 1447, 1554 |
| HindII | GTYRAC | 2 cut(s) | 1447, 1554 |
| HpaII | CCGG | 3 cut(s) | 117, 200, 308 |
| HphI | GGTGA | 4 cut(s) | 62, 670, 1366, 1688 |
| Hpy166II | GTNNAC | 6 cut(s) | 245, 765, 1024, 1447, 1554, 2177 |
| Hpy8I | GTNNAC | 6 cut(s) | 245, 765, 1024, 1447, 1554, 2177 |
| Hpy99I | CGWCG | 3 cut(s) | 85, 454, 788 |
| HpyCH4III | ACNGT | 9 cut(s) | 94, 242, 762, 1120, 1430, 2125, 2324, 2725, 2755 |
| HpyCH4IV | ACGT | 2 cut(s) | 15, 1415 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 827, 833, 1505, 1514, 1517, 1618, 2145 |
| HpyF3I | CTNAG | 6 cut(s) | 273, 884, 1033, 1512, 2295, 2364 |
| HpySE526I | ACGT | 2 cut(s) | 15, 1415 |
| Hsp92I | GRCGYC | 1 cut(s) | 1661 |
| HspAI | GCGC | 1 cut(s) | 1280 |
| Kpn2I | TCCGGA | 1 cut(s) | 199 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| LmnI | GCTCC | 3 cut(s) | 119, 202, 1626 |
| Lsp1109I | GCAGC | 6 cut(s) | 616, 814, 1495, 1504, 2642, 2803 |
| LweI | GCATC | 6 cut(s) | 567, 823, 1087, 1828, 2436, 2642 |
| MabI | ACCWGGT | 1 cut(s) | 1440 |
| MaeI | CTAG | 5 cut(s) | 354, 1091, 1257, 2016, 2784 |
| MaeII | ACGT | 2 cut(s) | 15, 1415 |
| MaeIII | GTNAC | 2 cut(s) | 88, 839 |
| MfeI | CAATTG | 1 cut(s) | 1128 |
| MflI | RGATCY | 5 cut(s) | 1201, 1487, 2458, 2469, 2653 |
| MhlI | GDGCHC | 6 cut(s) | 57, 116, 124, 907, 1467, 2301 |
| MlyI | GAGTC | 4 cut(s) | 127, 1307, 1981, 2366 |
| MmeI | TCCRAC | 7 cut(s) | 104, 354, 727, 834, 2095, 2314, 2502 |
| MroI | TCCGGA | 1 cut(s) | 199 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1028, 2397, 2552, 2811 |
| MslI | CAYNNNNRTG | 4 cut(s) | 797, 993, 1019, 1905 |
| MspA1I | CMGCKG | 1 cut(s) | 629 |
| MspCI | CTTAAG | 1 cut(s) | 1568 |
| MspI | CCGG | 3 cut(s) | 117, 200, 308 |
| MspR9I | CCNGG | 4 cut(s) | 118, 1442, 2267, 2330 |
| MunI | CAATTG | 1 cut(s) | 1128 |
| MvaI | CCWGG | 3 cut(s) | 1442, 2267, 2330 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 827, 833, 1505, 1514, 1517, 1618, 2145 |
| NciI | CCSGG | 1 cut(s) | 118 |
| NcoI | CCATGG | 2 cut(s) | 1622, 2657 |
| NdeI | CATATG | 2 cut(s) | 2135, 2152 |
| NlaIV | GGNNCC | 4 cut(s) | 204, 1561, 2234, 2655 |
| NmeAIII | GCCGAG | 1 cut(s) | 2701 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| NspI | RCATGY | 5 cut(s) | 1030, 1616, 1641, 2084, 2770 |
| PaeI | GCATGC | 2 cut(s) | 1641, 2770 |
| PaeR7I | CTCGAG | 1 cut(s) | 1265 |
| PagI | TCATGA | 1 cut(s) | 2038 |
| PceI | AGGCCT | 1 cut(s) | 983 |
| PciI | ACATGT | 2 cut(s) | 1026, 2080 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1028, 2397, 2552, 2811 |
| PfeI | GAWTC | 7 cut(s) | 196, 662, 1982, 2022, 2042, 2062, 2665 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1879 |
| PkrI | GCNGC | 6 cut(s) | 631, 829, 1510, 1519, 2632, 2793 |
| PleI | GAGTC | 4 cut(s) | 127, 1306, 1980, 2365 |
| PmaCI | CACGTG | 1 cut(s) | 16 |
| PmlI | CACGTG | 1 cut(s) | 16 |
| PpsI | GAGTC | 4 cut(s) | 127, 1306, 1980, 2365 |
| Ppu21I | YACGTR | 2 cut(s) | 16, 1416 |
| PpuMI | RGGWCCY | 1 cut(s) | 2848 |
| PscI | ACATGT | 2 cut(s) | 1026, 2080 |
| PshBI | ATTAAT | 2 cut(s) | 1652, 2256 |
| Psp124BI | GAGCTC | 3 cut(s) | 116, 907, 2301 |
| Psp5II | RGGWCCY | 1 cut(s) | 2848 |
| Psp6I | CCWGG | 3 cut(s) | 1440, 2265, 2328 |
| PspCI | CACGTG | 1 cut(s) | 16 |
| PspFI | CCCAGC | 1 cut(s) | 975 |
| PspGI | CCWGG | 3 cut(s) | 1440, 2265, 2328 |
| PspN4I | GGNNCC | 4 cut(s) | 204, 1561, 2234, 2655 |
| PspPI | GGNCC | 2 cut(s) | 2835, 2848 |
| PspPPI | RGGWCCY | 1 cut(s) | 2848 |
| PspXI | VCTCGAGB | 1 cut(s) | 1265 |
| PstI | CTGCAG | 1 cut(s) | 832 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2414 |
| PsuI | RGATCY | 5 cut(s) | 1201, 1487, 2458, 2469, 2653 |
| RsaI | GTAC | 3 cut(s) | 868, 1263, 2163 |
| RsaNI | GTAC | 3 cut(s) | 867, 1262, 2162 |
| RseI | CAYNNNNRTG | 4 cut(s) | 797, 993, 1019, 1905 |
| SacI | GAGCTC | 3 cut(s) | 116, 907, 2301 |
| SatI | GCNGC | 6 cut(s) | 630, 828, 1509, 1518, 2631, 2792 |
| Sau96I | GGNCC | 2 cut(s) | 2835, 2848 |
| ScaI | AGTACT | 1 cut(s) | 868 |
| SchI | GAGTC | 4 cut(s) | 127, 1307, 1981, 2366 |
| ScrFI | CCNGG | 4 cut(s) | 118, 1442, 2267, 2330 |
| SduI | GDGCHC | 6 cut(s) | 57, 116, 124, 907, 1467, 2301 |
| SexAI | ACCWGGT | 1 cut(s) | 1440 |
| SfaNI | GCATC | 6 cut(s) | 567, 823, 1087, 1828, 2436, 2642 |
| SfcI | CTRYAG | 1 cut(s) | 828 |
| Sfr274I | CTCGAG | 1 cut(s) | 1265 |
| SinI | GGWCC | 1 cut(s) | 2848 |
| SlaI | CTCGAG | 1 cut(s) | 1265 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 797, 993, 1019, 1905 |
| SmlI | CTYRAG | 4 cut(s) | 872, 1265, 1568, 2206 |
| SmoI | CTYRAG | 4 cut(s) | 872, 1265, 1568, 2206 |
| SnaBI | TACGTA | 1 cut(s) | 1416 |
| SpeI | ACTAGT | 1 cut(s) | 353 |
| SphI | GCATGC | 2 cut(s) | 1641, 2770 |
| SseBI | AGGCCT | 1 cut(s) | 983 |
| SsiI | CCGC | 8 cut(s) | 100, 176, 323, 344, 544, 627, 1976, 2673 |
| SspI | AATATT | 1 cut(s) | 301 |
| SspMI | CTAG | 5 cut(s) | 354, 1091, 1257, 2016, 2784 |
| SstI | GAGCTC | 3 cut(s) | 116, 907, 2301 |
| StuI | AGGCCT | 1 cut(s) | 983 |
| StyD4I | CCNGG | 4 cut(s) | 116, 1440, 2265, 2328 |
| StyI | CCWWGG | 6 cut(s) | 538, 1151, 1622, 1918, 2239, 2657 |
| TaaI | ACNGT | 9 cut(s) | 94, 242, 762, 1120, 1430, 2125, 2324, 2725, 2755 |
| TaiI | ACGT | 2 cut(s) | 18, 1418 |
| TatI | WGTACW | 2 cut(s) | 866, 2161 |
| TfiI | GAWTC | 7 cut(s) | 196, 662, 1982, 2022, 2042, 2062, 2665 |
| TscAI | CASTG | 7 cut(s) | 261, 804, 1435, 1949, 2130, 2447, 2760 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| TseI | GCWGC | 6 cut(s) | 629, 827, 1508, 1517, 2630, 2791 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspRI | CASTG | 7 cut(s) | 261, 804, 1435, 1949, 2130, 2447, 2760 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1879 |
| Vha464I | CTTAAG | 1 cut(s) | 1568 |
| VpaK11BI | GGWCC | 1 cut(s) | 2848 |
| VspI | ATTAAT | 2 cut(s) | 1652, 2256 |
| XapI | RAATTY | 9 cut(s) | 75, 161, 277, 412, 517, 563, 923, 1086, 2397 |
| XbaI | TCTAGA | 1 cut(s) | 2783 |
| XceI | RCATGY | 5 cut(s) | 1030, 1616, 1641, 2084, 2770 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1348, 1629 |
| XhoI | CTCGAG | 1 cut(s) | 1265 |
| XmiI | GTMKAC | 1 cut(s) | 764 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1028, 2397, 2552, 2811 |
| XspI | CTAG | 5 cut(s) | 354, 1091, 1257, 2016, 2784 |
| ZrmI | AGTACT | 1 cut(s) | 868 |