Rroxscaffold_5G00348050

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000521
Physical Location & Seq
Reverse (-)
19943446 .. 19946516
3071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00348050.1

Sequence Viewer

Length: 1485 bp
ATGGCTGACGAAGAACAATCTGCAGATCTCAAATCACCACTGATACCGGTGGTACTGCCCCAAGAACATGCAGTACATTCAACCAAGAGACAATTTACGAAAGACGGATTTCTCGGGGAACTGAAGAAGCAGCTATTGCTGGCAGGGCCGCTGGTATCATCAAATTTCTTGCTATGTGGTATGCAGGCTATTTCAGTCATGTATGTTGGTCATCTTGGGGAACTATCACTCGCAGCTGCTTCTACGGCAACTTCTTTTGCATCAGTCACTGGTTTGAGCTTGATTATAGGAATGGGTAGCGCATTGGACACATTTTGTGGGCAGTCCTATGGGGCAAAACAGTATCATATGCTTGGTGTACACATGCAGAGGGCAATGCTTGTTATTCTTTTGGCATGCATTCCTCTTGCAACTATATGGTTCAATGCAGGCCACATTCTCAAATTCTTGGGTCAAGATCCAGAAATTGCCGCGGCCGCTGGAACTTATGCTCGTTTCCTGACACCATGCATTTTCGCTTATGCAATCCAACAATGTCATTCCAGATTCTTGCAAACCCAAAACAATGTGGTTCCCATGATAGTTACCACAGGTAGTGCAACACTAGTGCACTTGCTTCTCTGCTGGCTTCTTGTATATAAGACCAGCTTGGGATATAGAGGCGCTGCTGTCGCGATCTCTATCTCATATTGGATCAATGCGTTACTCTTGGCTGTGTATATAAGAGTTTCTCCTTCTTGTATACACACATGGACTGGATTCTCAAAGGAGGCATTTCATGGAATTCCCAATTTCATAAGACTATCTATTCCTTCAGCTATAATGATCAGCTTGGAAATCTGGTCATTCGAAATGATGGTTCTCTTAGCTGGTTTCCTTCCAAATCCACGGCTTGAAACCTCAGTCCTATCAATCAGCCTTAATACATGTTCAATGGTATACATGATTCCTCTTGCATTCTCCAGTGCAGCAAGCACACGAGTTTCAAATCAATTGGGTGCGGGGCAACCACGACTAGCTCGTCTAGCAGTAGTTGTTTCACTATGCATAGTTGTTGCTGAAGGTGTTGTGGTTGCTACTGTACTGATATTGGGTAGAACAGTTTGGGGCTACTGTTATAGTAGTGAAGAGGAAGTAGTGAACTATGTTGGACAAATGCTGATTTTGCTCGCGGTATCACACTTTTTTGATGGACTTCAATCTGTGCTTTCAGGTATCATAAGAGGAAGTGGACAGCAGAAGATCGGAGCATATGTTAACCTGGGAGCTTATTATCTAATGGGCATTCCTACTTCAATATTATTAGCTTTTGTATTTCACATTGGAGGAAAGGGTCTTTGGATGGGAATCATCGTGGCACTATTTGTGCAAGCACTATTTCTGGGAATCATAATCTTATTCACAGATTGGGAGAAAGAAGTGAAGAAAGCTTCTGATAGAGTGTACAATACAATGAGCGTGGCTGATGCAACATCTATAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

494

Amino Acids

53.47

Weight (kDa)

8.26

Isoelectric Point (pI)

28.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 50 - 210 1.5e-38 MatE
MatE PF01554 271 - 432 3.1e-26 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000521)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g09990 FvH4_4g09990 FvH4_4g09990 FvH4_4g09990 FvH4_7g32860 FvH4_7g32860 FvH4_7g32860 FvH4_7g32860
malus_domestica MD11G1148000.v1.1 MD13G1266200.v1.1 MD14G1231800.v1.1
prunus_persica Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090100_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1 Prupe.1G090300_v2.0.a1
pyrus_communis pycom13g23330
rosa_chinensis RchiOBHm_Chr4g0403401 RchiOBHm_Chr4g0403411 RchiOBHm_Chr4g0403421 RchiOBHm_Chr4g0403461 RchiOBHm_Chr4g0403631 RchiOBHm_Chr7g0223601 RchiOBHm_Chr7g0238161
rosa_laevigata RLG00000000937 RLG00000001957 RLG00000008965 RLG00000008975 RLG00000008976 RLG00000008978
rosa_multiflora Rmu_co8335743.1_g000001 Rmu_sc0005734.1_g000001 Rmu_sc0007727.1_g000011 Rmu_sc0011775.1_g000002 Rmu_sc0011775.1_g000005 Rmu_sc0028062.1_g000002
rosa_roxburghii Rroxscaffold_3G00223300 Rroxscaffold_5G00348050 Rroxscaffold_5G00348060 Rroxscaffold_5G00348120 Rroxscaffold_5G00348240
rosa_rugosa Rorug04G0042300 Rorug04G0042400 Rorug04G0042500 Rorug04G0042600.1 Rorug04G0042700 Rorug04G0042800 Rorug04G0042900 Rorug04G0043000 Rorug04G0043100 Rorug04G0043200 Rorug04G0043300 Rorug04G0043400 Rorug04G0044700 Rorug07G0310600 Rorug07G0310700 Rorug07G0310700
rosa_samantha Rh4AG118700 Rh4AG118800 Rh4AG118900 Rh4AG119000 Rh4BG111600 Rh4BG111800 Rh4BG111900 Rh4BG112900 Rh4CG126600 Rh4CG126900 Rh4CG127800 Rh4DG111300 Rh4DG111400 Rh4DG111500 Rh7AG466500 Rh7BG352200 Rh7BG436900 Rh7CG484200 Rh7DG452600
rosa_wichuraiana Rw4G009630 Rw4G009640 Rw4G009650 Rw4G009710 Rw7G038620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1020
AccI GTMKAC 2 cut(s) 742, 939
AccII CGCG 3 cut(s) 473, 674, 1172
AciI CCGC 6 cut(s) 149, 471, 473, 477, 1001, 1172
AclWI GGATC 2 cut(s) 452, 701
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 3 cut(s) 163, 443, 783
AcuI CTGAAG 3 cut(s) 143, 798, 1080
AfaI GTAC 5 cut(s) 54, 75, 360, 1083, 1445
AflIII ACRYGT 1 cut(s) 926
AgeI ACCGGT 1 cut(s) 46
AgsI TTSAA 7 cut(s) 81, 424, 896, 933, 987, 1199, 1296
AhlI ACTAGT 1 cut(s) 604
AjnI CCWGG 1 cut(s) 1260
AjuI GAANNNNNNNTTGG 2 cut(s) 1321, 1353
Alw21I GWGCWC 1 cut(s) 612
Alw26I GTCTC 1 cut(s) 82
Alw44I GTGCAC 1 cut(s) 608
AlwI GGATC 2 cut(s) 452, 701
AlwNI CAGNNNCTG 1 cut(s) 269
Ama87I CYCGRG 1 cut(s) 113
AoxI GGCC 3 cut(s) 146, 430, 474
ApaLI GTGCAC 1 cut(s) 608
ApeKI GCWGC 5 cut(s) 130, 233, 236, 665, 968
ApoI RAATTY 3 cut(s) 163, 443, 783
AsiGI ACCGGT 1 cut(s) 46
AspLEI GCGC 2 cut(s) 302, 665
AspS9I GGNCC 1 cut(s) 146
AsuHPI GGTGA 1 cut(s) 27
AsuII TTCGAA 1 cut(s) 849
AvaI CYCGRG 1 cut(s) 113
BaeGI GKGCMC 1 cut(s) 612
BauI CACGAG 1 cut(s) 978
Bbv12I GWGCWC 1 cut(s) 612
BbvI GCAGC 5 cut(s) 142, 223, 245, 652, 980
BccI CCATC 3 cut(s) 850, 1184, 1336
BceAI ACGGC 2 cut(s) 261, 905
BciT130I CCWGG 1 cut(s) 1262
BclI TGATCA 1 cut(s) 825
BcoDI GTCTC 1 cut(s) 82
BcuI ACTAGT 1 cut(s) 604
BfaI CTAG 3 cut(s) 605, 1016, 1025
BfmI CTRYAG 1 cut(s) 21
BfoI RGCGCY 1 cut(s) 666
BglII AGATCT 1 cut(s) 25
BisI GCNGC 9 cut(s) 131, 149, 234, 237, 471, 474, 477, 666, 969
BlsI GCNGC 9 cut(s) 132, 150, 235, 238, 472, 475, 478, 667, 970
Bme1390I CCNGG 1 cut(s) 1262
BmeT110I CYCGRG 1 cut(s) 113
BmgT120I GGNCC 1 cut(s) 146
BmiI GGNNCC 1 cut(s) 573
BmrFI CCNGG 1 cut(s) 1262
BmsI GCATC 2 cut(s) 269, 1456
BpmI CTGGAG 1 cut(s) 946
Bpu14I TTCGAA 1 cut(s) 849
BsaBI GATNNNNATC 2 cut(s) 680, 1346
BsaJI CCNNGG 3 cut(s) 471, 887, 1261
BsaWI WCCGGW 1 cut(s) 46
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 3 cut(s) 274, 760, 963
Bse3DI GCAATG 1 cut(s) 381
Bse8I GATNNNNATC 2 cut(s) 680, 1346
BseBI CCWGG 1 cut(s) 1262
BseDI CCNNGG 3 cut(s) 471, 887, 1261
BseGI GGATG 1 cut(s) 1347
BseJI GATNNNNATC 2 cut(s) 680, 1346
BseMI GCAATG 1 cut(s) 381
BseMII CTCAG 1 cut(s) 915
BseNI ACTGG 3 cut(s) 274, 760, 963
BseSI GKGCMC 1 cut(s) 612
BseX3I CGGCCG 1 cut(s) 474
BseXI GCAGC 5 cut(s) 142, 223, 245, 652, 980
BsgI GTGCAG 1 cut(s) 987
Bsh1236I CGCG 3 cut(s) 473, 674, 1172
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 3 cut(s) 148, 432, 476
BshTI ACCGGT 1 cut(s) 46
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 1 cut(s) 612
BsiHKCI CYCGRG 1 cut(s) 113
BsiSI CCGG 1 cut(s) 47
BsmAI GTCTC 1 cut(s) 82
BsmI GAATGC 3 cut(s) 399, 956, 1284
BsnI GGCC 3 cut(s) 148, 432, 476
BsoBI CYCGRG 1 cut(s) 113
Bsp119I TTCGAA 1 cut(s) 849
Bsp1286I GDGCHC 1 cut(s) 612
Bsp1407I TGTACA 2 cut(s) 358, 1443
Bsp143I GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
Bsp68I TCGCGA 1 cut(s) 674
BspACI CCGC 6 cut(s) 149, 471, 473, 477, 1001, 1172
BspANI GGCC 3 cut(s) 148, 432, 476
BspCNI CTCAG 1 cut(s) 914
BspFNI CGCG 3 cut(s) 473, 674, 1172
BspLI GGNNCC 1 cut(s) 573
BspMAI CTGCAG 1 cut(s) 25
BspPI GGATC 2 cut(s) 452, 701
BspT104I TTCGAA 1 cut(s) 849
BsrDI GCAATG 1 cut(s) 381
BsrFI RCCGGY 1 cut(s) 46
BsrGI TGTACA 2 cut(s) 358, 1443
BsrI ACTGG 3 cut(s) 274, 760, 963
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 3 cut(s) 471, 887, 1261
BssMI GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
BssNAI GTATAC 2 cut(s) 743, 940
BssSI CACGAG 1 cut(s) 978
Bst1107I GTATAC 2 cut(s) 743, 940
Bst2BI CACGAG 1 cut(s) 978
Bst2UI CCWGG 1 cut(s) 1262
Bst4CI ACNGT 4 cut(s) 342, 1081, 1102, 1115
Bst6I CTCTTC 1 cut(s) 1122
BstAPI GCANNNNNTGC 1 cut(s) 136
BstAUI TGTACA 2 cut(s) 358, 1443
BstBI TTCGAA 1 cut(s) 849
BstC8I GCNNGC 8 cut(s) 141, 186, 397, 430, 626, 973, 1170, 1371
BstDEI CTNAG 2 cut(s) 865, 901
BstDSI CCRYGG 2 cut(s) 471, 887
BstF5I GGATG 1 cut(s) 1347
BstFNI CGCG 3 cut(s) 473, 674, 1172
BstH2I RGCGCY 1 cut(s) 666
BstHHI GCGC 2 cut(s) 302, 665
BstKTI GATC 6 cut(s) 28, 460, 678, 696, 828, 1245
BstMAI GTCTC 1 cut(s) 82
BstMBI GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 7 cut(s) 136, 145, 245, 476, 671, 1025, 1165
BstNI CCWGG 1 cut(s) 1262
BstNSI RCATGY 4 cut(s) 71, 367, 399, 930
BstSCI CCNGG 1 cut(s) 1260
BstSFI CTRYAG 1 cut(s) 21
BstSLI GKGCMC 1 cut(s) 612
BstUI CGCG 3 cut(s) 473, 674, 1172
BstV1I GCAGC 5 cut(s) 142, 223, 245, 652, 980
BstX2I RGATCY 2 cut(s) 25, 457
BstYI RGATCY 2 cut(s) 25, 457
BstZ17I GTATAC 2 cut(s) 743, 940
BstZI CGGCCG 1 cut(s) 474
BsuRI GGCC 3 cut(s) 148, 432, 476
BtgI CCRYGG 2 cut(s) 471, 887
BtsCI GGATG 1 cut(s) 1347
BtsIMutI CAGTG 3 cut(s) 38, 267, 970
BtuMI TCGCGA 1 cut(s) 674
Cac8I GCNNGC 8 cut(s) 141, 186, 397, 430, 626, 973, 1170, 1371
CaiI CAGNNNCTG 1 cut(s) 269
CciNI GCGGCCGC 1 cut(s) 474
CfoI GCGC 2 cut(s) 302, 665
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 1 cut(s) 146
Cfr42I CCGCGG 1 cut(s) 474
Csp6I GTAC 5 cut(s) 53, 74, 359, 1082, 1444
CspAI ACCGGT 1 cut(s) 46
CspCI CAANNNNNGTGG 2 cut(s) 1440, 1475
CviQI GTAC 5 cut(s) 53, 74, 359, 1082, 1444
DdeI CTNAG 2 cut(s) 865, 901
DpnI GATC 6 cut(s) 27, 459, 677, 695, 827, 1244
DpnII GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
DrdI GACNNNNNNGTC 1 cut(s) 1020
DseDI GACNNNNNNGTC 1 cut(s) 1020
EaeI YGGCCR 1 cut(s) 474
EagI CGGCCG 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 1122
EarI CTCTTC 1 cut(s) 1122
EclXI CGGCCG 1 cut(s) 474
Eco52I CGGCCG 1 cut(s) 474
Eco57I CTGAAG 3 cut(s) 143, 798, 1080
Eco88I CYCGRG 1 cut(s) 113
EcoRI GAATTC 1 cut(s) 783
EcoRII CCWGG 1 cut(s) 1260
EcoT22I ATGCAT 3 cut(s) 401, 512, 1049
FalI AAGNNNNNCTT 2 cut(s) 632, 664
FauI CCCGC 1 cut(s) 994
FauNDI CATATG 2 cut(s) 348, 1252
FbaI TGATCA 1 cut(s) 825
FblI GTMKAC 2 cut(s) 742, 939
Fnu4HI GCNGC 9 cut(s) 131, 149, 234, 237, 471, 474, 477, 666, 969
FokI GGATG 1 cut(s) 1354
Fsp4HI GCNGC 9 cut(s) 131, 149, 234, 237, 471, 474, 477, 666, 969
FspBI CTAG 3 cut(s) 605, 1016, 1025
GlaI GCGC 2 cut(s) 301, 664
GluI GCNGC 9 cut(s) 131, 149, 234, 237, 471, 474, 477, 666, 969
GsuI CTGGAG 1 cut(s) 946
HaeII RGCGCY 1 cut(s) 666
HaeIII GGCC 3 cut(s) 148, 432, 476
HapII CCGG 1 cut(s) 47
HhaI GCGC 2 cut(s) 302, 665
Hin6I GCGC 2 cut(s) 300, 663
HinP1I GCGC 2 cut(s) 300, 663
HincII GTYRAC 1 cut(s) 1258
HindII GTYRAC 1 cut(s) 1258
HindIII AAGCTT 1 cut(s) 1428
HinfI GANTC 5 cut(s) 546, 759, 946, 1347, 1386
HpaI GTTAAC 1 cut(s) 1258
HpaII CCGG 1 cut(s) 47
HphI GGTGA 1 cut(s) 27
Hpy166II GTNNAC 9 cut(s) 359, 361, 610, 743, 940, 1141, 1232, 1258, 1444
Hpy188I TCNGA 2 cut(s) 1247, 1435
Hpy188III TCNNGA 5 cut(s) 455, 461, 499, 543, 673
Hpy8I GTNNAC 9 cut(s) 359, 361, 610, 743, 940, 1141, 1232, 1258, 1444
HpyAV CCTTC 4 cut(s) 744, 822, 887, 1055
HpyCH4III ACNGT 4 cut(s) 342, 1081, 1102, 1115
HpyF10VI GCNNNNNNNGC 7 cut(s) 136, 145, 245, 476, 671, 1025, 1165
HpyF3I CTNAG 2 cut(s) 865, 901
HspAI GCGC 2 cut(s) 300, 663
Ksp22I TGATCA 1 cut(s) 825
KspAI GTTAAC 1 cut(s) 1258
KspI CCGCGG 1 cut(s) 474
Kzo9I GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
LmnI GCTCC 2 cut(s) 1247, 1265
Lsp1109I GCAGC 5 cut(s) 142, 223, 245, 652, 980
LweI GCATC 2 cut(s) 269, 1456
MaeI CTAG 3 cut(s) 605, 1016, 1025
MaeIII GTNAC 3 cut(s) 265, 583, 702
MalI GATC 6 cut(s) 27, 459, 677, 695, 827, 1244
MboI GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
MboII GAAGA 5 cut(s) 23, 136, 1139, 1252, 1435
MfeI CAATTG 1 cut(s) 992
MflI RGATCY 2 cut(s) 25, 457
MhlI GDGCHC 1 cut(s) 612
MluCI AATT 7 cut(s) 92, 163, 443, 465, 783, 790, 992
MmeI TCCRAC 2 cut(s) 553, 1129
MnlI CCTC 9 cut(s) 363, 414, 653, 763, 910, 960, 1123, 1217, 1319
Mph1103I ATGCAT 3 cut(s) 401, 512, 1049
MseI TTAA 2 cut(s) 921, 1257
MspA1I CMGCKG 4 cut(s) 151, 236, 473, 479
MspI CCGG 1 cut(s) 47
MspR9I CCNGG 1 cut(s) 1262
MunI CAATTG 1 cut(s) 992
Mva1269I GAATGC 3 cut(s) 399, 956, 1284
MvaI CCWGG 1 cut(s) 1262
MvnI CGCG 3 cut(s) 473, 674, 1172
MwoI GCNNNNNNNGC 7 cut(s) 136, 145, 245, 476, 671, 1025, 1165
NdeI CATATG 2 cut(s) 348, 1252
NdeII GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
NlaIV GGNNCC 1 cut(s) 573
NmuCI GTSAC 1 cut(s) 265
NotI GCGGCCGC 1 cut(s) 474
NruI TCGCGA 1 cut(s) 674
NsiI ATGCAT 3 cut(s) 401, 512, 1049
NspI RCATGY 4 cut(s) 71, 367, 399, 930
NspV TTCGAA 1 cut(s) 849
PaeI GCATGC 1 cut(s) 399
PciI ACATGT 1 cut(s) 926
PcsI WCGNNNNNNNCGW 1 cut(s) 1018
PctI GAATGC 3 cut(s) 399, 956, 1284
PfeI GAWTC 5 cut(s) 546, 759, 946, 1347, 1386
PinAI ACCGGT 1 cut(s) 46
PkrI GCNGC 9 cut(s) 132, 150, 235, 238, 472, 475, 478, 667, 970
PscI ACATGT 1 cut(s) 926
Psp6I CCWGG 1 cut(s) 1260
PspGI CCWGG 1 cut(s) 1260
PspN4I GGNNCC 1 cut(s) 573
PspPI GGNCC 1 cut(s) 146
PsrI GAACNNNNNNTAC 2 cut(s) 57, 89
PstI CTGCAG 1 cut(s) 25
PstNI CAGNNNCTG 1 cut(s) 269
PsuI RGATCY 2 cut(s) 25, 457
PvuII CAGCTG 1 cut(s) 236
RruI TCGCGA 1 cut(s) 674
RsaI GTAC 5 cut(s) 54, 75, 360, 1083, 1445
RsaNI GTAC 5 cut(s) 53, 74, 359, 1082, 1444
SacII CCGCGG 1 cut(s) 474
SaqAI TTAA 2 cut(s) 921, 1257
SatI GCNGC 9 cut(s) 131, 149, 234, 237, 471, 474, 477, 666, 969
Sau3AI GATC 6 cut(s) 25, 457, 675, 693, 825, 1242
Sau96I GGNCC 1 cut(s) 146
ScrFI CCNGG 1 cut(s) 1262
SduI GDGCHC 1 cut(s) 612
SfaNI GCATC 2 cut(s) 269, 1456
SfcI CTRYAG 1 cut(s) 21
Sfr303I CCGCGG 1 cut(s) 474
SfuI TTCGAA 1 cut(s) 849
SgrBI CCGCGG 1 cut(s) 474
SpeI ACTAGT 1 cut(s) 604
SphI GCATGC 1 cut(s) 399
Sse9I AATT 7 cut(s) 92, 163, 443, 465, 783, 790, 992
SsiI CCGC 6 cut(s) 149, 471, 473, 477, 1001, 1172
SspI AATATT 1 cut(s) 1299
SspMI CTAG 3 cut(s) 605, 1016, 1025
StyD4I CCNGG 1 cut(s) 1260
TaaI ACNGT 4 cut(s) 342, 1081, 1102, 1115
TaqI TCGA 1 cut(s) 849
TasI AATT 7 cut(s) 92, 163, 443, 465, 783, 790, 992
TatI WGTACW 4 cut(s) 73, 358, 1081, 1443
TauI GCSGC 4 cut(s) 151, 473, 476, 479
TfiI GAWTC 5 cut(s) 546, 759, 946, 1347, 1386
Tru1I TTAA 2 cut(s) 921, 1257
Tru9I TTAA 2 cut(s) 921, 1257
TscAI CASTG 3 cut(s) 45, 274, 970
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 5 cut(s) 130, 233, 236, 665, 968
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 2 cut(s) 767, 784
TspGWI ACGGA 1 cut(s) 120
TspRI CASTG 3 cut(s) 45, 274, 970
VneI GTGCAC 1 cut(s) 608
XapI RAATTY 3 cut(s) 163, 443, 783
XceI RCATGY 4 cut(s) 71, 367, 399, 930
XmiI GTMKAC 2 cut(s) 742, 939
XspI CTAG 3 cut(s) 605, 1016, 1025
Zsp2I ATGCAT 3 cut(s) 401, 512, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.