MD11G1259900.v1.1

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000611
Physical Location & Seq
Reverse (-)
37391395 .. 37396167
4773 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1259900.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGGACTCAACCAAGAAGCGAAAGCTGGACGAGAACGGCGTCGTTCTGGACACGGATCCCTCCTCCGCCCCCAAGCTCTCCCCCGAAGACGCTCGCAGGCTCATCGAGCGATTCACCCCCGATCAACTCCTCGACATTCTCCAAGACGCCCTCTCCCGCCACGTCGACGTTCTCGACGCCGTCCGCTCCATCGCCGATCCCGACGCCTCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCACCACCGAGGGCCTCCGATCCCTCTTCTCCGCCTACGGCGAGCTGGAGGAGGCTATCGTTATCCTCGACAAAACCACCGGAAAATCCAAGGGTTACGGGTTCGTCACGTTCCGCCACGTTGACAGTGCTCTCATGGCCCTGAAAGAACCGAGCAAGAAGATCGACGGCCGCATGACCGTCACGCAGCTCGCCTCCGCGGGGAATTCGAACTCCAACACCGCCTCCAACAACGTCGCTGACGTATCGTTGCGGAAGATTTATGTGGCCAATGTTCCCTATGACATGCCATCGGATAAGCTCTTGGCGCATTTTGCTCTGTACGGGGAGATAGAGGAGGGCCCGCTAGGGTTTGATAAGCAGACTGGGAAGTGCAAAGGGTATGCGCTGTTTGTGTATAAGACTCCGGAGGGGGCTCAGGCGGCGCTTGTTGATCCGGCGAAGAACATCGAGGGGAGGCAGTTGCTTTGTAAATTGGCGATTGATGGGAAAAAGAGCAAGTCGGACGGGCCGGGGCAGGGTCAAGGACCCGGGAGTGGTTCCAATGCGCATGGAGATGGGATGGGGATGGCACCGCCGTCTTCGATTCCTGGGCAGTACGGCATCCCAGGTGGAATTGGTTCTTATGGTGGGTATAACAGTGGGCTTCAGGGCCAGCCTCCATTGGGTCACCATCCATTGGGTGGGCCTGGGTTGTCTGGTATTGGAAACCAGGTGAATTCGGGTTTGGGTGGTGGTGGTGGATATGGAGGGTTGGGTGGGCCTTATGGTAACTATGGCGGGCCTGGGGGTTATGGTTTAGGTGGTGCCGGTGGGTTGGGTGGTGGACTTGGTGGTGCTGGGTCGGGTGGTCCAGTTGGTGGTGTGGGTACTGGGTCGTCTTTATATGGATTGCCTCCGAGTTCAGGTGGGTTACCATCTGGTAGGTATCCGGAGGGTGGGCACTACGGCCTGTCGGCCTATCAGAATCAGCACCACCAGCAAGCTGGAACGTCACCCCTTCCAAGGGTTCCTCAAGGTGGCATGTACCCAAATGTGTATGATCGCTTGTTGGCGCAGATGCTTTATATGGTTCTGGTGATTGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009692 GO:0009693 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032496 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070935 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090693 GO:0097159 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902369 GO:1902373 GO:1903311 GO:1903312
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

445

Amino Acids

45.63

Weight (kDa)

6.76

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 74 - 140 3.8e-16 RNA recognition motif
RRM_1 PF00076 169 - 236 6.1e-09 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 795
AccB1I GGYRCC 2 cut(s) 817, 1052
AccB7I CCANNNNNTGG 3 cut(s) 925, 929, 1106
AccBSI CCGCTC 1 cut(s) 186
AccI GTMKAC 1 cut(s) 165
AccII CGCG 2 cut(s) 231, 446
AccIII TCCGGA 2 cut(s) 652, 1177
AclWI GGATC 5 cut(s) 50, 63, 191, 261, 674
AcoI YGGCCR 2 cut(s) 415, 513
AcsI RAATTY 2 cut(s) 451, 964
AcuI CTGAAG 1 cut(s) 878
AcyI GRCGYC 4 cut(s) 39, 147, 177, 204
AfaI GTAC 4 cut(s) 569, 845, 1117, 1274
AjiI CACGTC 1 cut(s) 163
AjnI CCWGG 5 cut(s) 835, 853, 934, 957, 1030
AjuI GAANNNNNNNTTGG 2 cut(s) 956, 988
AluBI AGCT 7 cut(s) 25, 76, 220, 292, 436, 547, 1232
AluI AGCT 7 cut(s) 25, 76, 220, 292, 436, 547, 1232
Alw21I GWGCWC 1 cut(s) 379
AlwI GGATC 5 cut(s) 50, 63, 191, 261, 674
Ama87I CYCGRG 1 cut(s) 776
Aor13HI TCCGGA 2 cut(s) 652, 1177
ApaI GGGCCC 1 cut(s) 590
ApeKI GCWGC 1 cut(s) 433
ApoI RAATTY 2 cut(s) 451, 964
Asp700I GAANNNNTTC 1 cut(s) 865
AspLEI GCGC 6 cut(s) 216, 556, 634, 673, 796, 1303
AsuC2I CCSGG 3 cut(s) 759, 777, 778
AsuHPI GGTGA 4 cut(s) 106, 908, 973, 1233
AsuII TTCGAA 1 cut(s) 455
AvaI CYCGRG 1 cut(s) 776
AvaII GGWCC 2 cut(s) 773, 1097
BaeGI GKGCMC 2 cut(s) 590, 1191
BalI TGGCCA 1 cut(s) 515
BamHI GGATCC 1 cut(s) 55
BanI GGYRCC 2 cut(s) 817, 1052
BanII GRGCYC 2 cut(s) 590, 664
BbsI GAAGAC 2 cut(s) 93, 819
Bbv12I GWGCWC 1 cut(s) 379
BbvI GCAGC 1 cut(s) 445
BccI CCATC 8 cut(s) 197, 544, 725, 797, 802, 808, 927, 1171
BceAI ACGGC 7 cut(s) 52, 164, 301, 430, 808, 862, 1210
BcgI CGANNNNNNTGC 4 cut(s) 85, 119, 391, 425
BciT130I CCWGG 5 cut(s) 837, 855, 936, 959, 1032
BciVI GTATCC 1 cut(s) 1185
BcnI CCSGG 3 cut(s) 759, 777, 778
BfaI CTAG 1 cut(s) 593
BfoI RGCGCY 1 cut(s) 674
BfuI GTATCC 1 cut(s) 1185
BisI GCNGC 4 cut(s) 232, 418, 434, 669
BlsI GCNGC 4 cut(s) 233, 419, 435, 670
Bme1390I CCNGG 8 cut(s) 759, 777, 778, 837, 855, 936, 959, 1032
Bme18I GGWCC 2 cut(s) 773, 1097
BmeT110I CYCGRG 1 cut(s) 776
BmgBI CACGTC 1 cut(s) 163
BmiI GGNNCC 7 cut(s) 57, 588, 775, 787, 819, 1054, 1257
BmrFI CCNGG 8 cut(s) 759, 777, 778, 837, 855, 936, 959, 1032
BmrI ACTGGG 2 cut(s) 621, 1128
BmsI GCATC 2 cut(s) 858, 1296
BmuI ACTGGG 2 cut(s) 621, 1128
BpiI GAAGAC 2 cut(s) 93, 819
BpmI CTGGAG 1 cut(s) 314
Bpu10I CCTNAGC 1 cut(s) 663
Bpu14I TTCGAA 1 cut(s) 455
BpuEI CTTGAG 1 cut(s) 1245
BpuMI CCSGG 3 cut(s) 759, 777, 778
BsaHI GRCGYC 4 cut(s) 39, 147, 177, 204
BsaWI WCCGGW 3 cut(s) 326, 652, 1177
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 455, 485
Bse118I RCCGGY 1 cut(s) 1055
Bse1I ACTGG 3 cut(s) 616, 1100, 1123
BseAI TCCGGA 2 cut(s) 652, 1177
BseBI CCWGG 5 cut(s) 837, 855, 936, 959, 1032
BseGI GGATG 5 cut(s) 225, 813, 819, 849, 919
BseMII CTCAG 1 cut(s) 677
BseNI ACTGG 3 cut(s) 616, 1100, 1123
BseRI GAGGAG 4 cut(s) 52, 119, 311, 596
BseSI GKGCMC 2 cut(s) 590, 1191
BseX3I CGGCCG 1 cut(s) 415
BseXI GCAGC 1 cut(s) 445
BseYI CCCAGC 3 cut(s) 210, 240, 1085
Bsh1236I CGCG 2 cut(s) 231, 446
Bsh1285I CGRYCG 1 cut(s) 418
BshNI GGYRCC 2 cut(s) 817, 1052
BsiEI CGRYCG 1 cut(s) 418
BsiHKAI GWGCWC 1 cut(s) 379
BsiHKCI CYCGRG 1 cut(s) 776
BsiSI CCGG 7 cut(s) 327, 653, 683, 758, 777, 1056, 1178
BslFI GGGAC 1 cut(s) 257
BsmFI GGGAC 1 cut(s) 257
BsoBI CYCGRG 1 cut(s) 776
Bsp119I TTCGAA 1 cut(s) 455
Bsp120I GGGCCC 1 cut(s) 586
Bsp1286I GDGCHC 4 cut(s) 379, 590, 664, 1191
Bsp13I TCCGGA 2 cut(s) 652, 1177
Bsp143I GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
BspCNI CTCAG 1 cut(s) 676
BspEI TCCGGA 2 cut(s) 652, 1177
BspFNI CGCG 2 cut(s) 231, 446
BspLI GGNNCC 7 cut(s) 57, 588, 775, 787, 819, 1054, 1257
BspPI GGATC 5 cut(s) 50, 63, 191, 261, 674
BspQI GCTCTTC 1 cut(s) 227
BspT104I TTCGAA 1 cut(s) 455
BspT107I GGYRCC 2 cut(s) 817, 1052
BsrBI CCGCTC 1 cut(s) 186
BsrFI RCCGGY 1 cut(s) 1055
BsrI ACTGG 3 cut(s) 616, 1100, 1123
BssAI RCCGGY 1 cut(s) 1055
BssMI GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
BssNI GRCGYC 4 cut(s) 39, 147, 177, 204
BssT1I CCWWGG 2 cut(s) 336, 1250
Bst2UI CCWGG 5 cut(s) 837, 855, 936, 959, 1032
Bst4CI ACNGT 3 cut(s) 374, 427, 887
Bst6I CTCTTC 2 cut(s) 227, 278
BstACI GRCGYC 4 cut(s) 39, 147, 177, 204
BstBI TTCGAA 1 cut(s) 455
BstC8I GCNNGC 9 cut(s) 94, 98, 218, 290, 438, 590, 902, 1028, 1230
BstDEI CTNAG 1 cut(s) 663
BstDSI CCRYGG 2 cut(s) 229, 444
BstEII GGTNACC 2 cut(s) 914, 1158
BstF5I GGATG 5 cut(s) 225, 813, 819, 849, 919
BstFNI CGCG 2 cut(s) 231, 446
BstH2I RGCGCY 1 cut(s) 674
BstHHI GCGC 6 cut(s) 216, 556, 634, 673, 796, 1303
BstKTI GATC 7 cut(s) 58, 124, 199, 269, 411, 682, 1291
BstMBI GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
BstMCI CGRYCG 1 cut(s) 418
BstMWI GCNNNNNNNGC 7 cut(s) 106, 237, 383, 553, 560, 668, 1225
BstNI CCWGG 5 cut(s) 837, 855, 936, 959, 1032
BstNSI RCATGY 2 cut(s) 535, 1273
BstPI GGTNACC 2 cut(s) 914, 1158
BstSCI CCNGG 8 cut(s) 757, 775, 776, 835, 853, 934, 957, 1030
BstSLI GKGCMC 2 cut(s) 590, 1191
BstUI CGCG 2 cut(s) 231, 446
BstV1I GCAGC 1 cut(s) 445
BstV2I GAAGAC 2 cut(s) 93, 819
BstX2I RGATCY 1 cut(s) 55
BstXI CCANNNNNNTGG 1 cut(s) 1232
BstYI RGATCY 1 cut(s) 55
BstZI CGGCCG 1 cut(s) 415
BsuI GTATCC 1 cut(s) 1185
BtgI CCRYGG 2 cut(s) 229, 444
BtgZI GCGATG 1 cut(s) 175
BtrI CACGTC 1 cut(s) 163
BtsCI GGATG 5 cut(s) 225, 813, 819, 849, 919
BtsIMutI CAGTG 2 cut(s) 379, 892
Cac8I GCNNGC 9 cut(s) 94, 98, 218, 290, 438, 590, 902, 1028, 1230
CfoI GCGC 6 cut(s) 216, 556, 634, 673, 796, 1303
Cfr10I RCCGGY 1 cut(s) 1055
Cfr42I CCGCGG 2 cut(s) 232, 447
Cfr9I CCCGGG 1 cut(s) 776
CseI GACGC 5 cut(s) 28, 98, 155, 185, 212
CsiI ACCWGGT 1 cut(s) 957
Csp6I GTAC 4 cut(s) 568, 844, 1116, 1273
CviAII CATG 5 cut(s) 382, 421, 532, 797, 1270
CviQI GTAC 4 cut(s) 568, 844, 1116, 1273
DdeI CTNAG 1 cut(s) 663
DpnI GATC 7 cut(s) 57, 123, 198, 268, 410, 681, 1290
DpnII GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
EaeI YGGCCR 2 cut(s) 415, 513
EagI CGGCCG 1 cut(s) 415
Eam1104I CTCTTC 2 cut(s) 227, 278
EarI CTCTTC 2 cut(s) 227, 278
EciI GGCGGA 3 cut(s) 55, 268, 350
EclXI CGGCCG 1 cut(s) 415
Eco130I CCWWGG 2 cut(s) 336, 1250
Eco24I GRGCYC 2 cut(s) 590, 664
Eco47I GGWCC 2 cut(s) 773, 1097
Eco52I CGGCCG 1 cut(s) 415
Eco57I CTGAAG 1 cut(s) 878
Eco88I CYCGRG 1 cut(s) 776
Eco91I GGTNACC 2 cut(s) 914, 1158
EcoO109I RGGNCCY 3 cut(s) 259, 586, 773
EcoO65I GGTNACC 2 cut(s) 914, 1158
EcoRI GAATTC 2 cut(s) 451, 964
EcoRII CCWGG 5 cut(s) 835, 853, 934, 957, 1030
EcoT14I CCWWGG 2 cut(s) 336, 1250
EcoT38I GRGCYC 2 cut(s) 590, 664
ErhI CCWWGG 2 cut(s) 336, 1250
FaeI CATG 5 cut(s) 385, 424, 535, 800, 1273
FaqI GGGAC 1 cut(s) 257
FatI CATG 5 cut(s) 381, 420, 531, 796, 1269
FauI CCCGC 4 cut(s) 164, 439, 597, 1019
FblI GTMKAC 1 cut(s) 165
Fnu4HI GCNGC 4 cut(s) 232, 418, 434, 669
FokI GGATG 5 cut(s) 212, 820, 826, 836, 906
FriOI GRGCYC 2 cut(s) 590, 664
Fsp4HI GCNGC 4 cut(s) 232, 418, 434, 669
FspAI RTGCGCAY 1 cut(s) 795
FspBI CTAG 1 cut(s) 593
FspI TGCGCA 1 cut(s) 795
GlaI GCGC 6 cut(s) 215, 555, 633, 672, 795, 1302
GluI GCNGC 4 cut(s) 232, 418, 434, 669
GsaI CCCAGC 3 cut(s) 214, 244, 1089
GsuI CTGGAG 1 cut(s) 314
HaeII RGCGCY 1 cut(s) 674
HapII CCGG 7 cut(s) 327, 653, 683, 758, 777, 1056, 1178
HgaI GACGC 5 cut(s) 28, 98, 155, 185, 212
HhaI GCGC 6 cut(s) 216, 556, 634, 673, 796, 1303
Hin1I GRCGYC 4 cut(s) 39, 147, 177, 204
Hin1II CATG 5 cut(s) 385, 424, 535, 800, 1273
Hin6I GCGC 6 cut(s) 214, 554, 632, 671, 794, 1301
HinP1I GCGC 6 cut(s) 214, 554, 632, 671, 794, 1301
HincII GTYRAC 2 cut(s) 166, 370
HindII GTYRAC 2 cut(s) 166, 370
HinfI GANTC 5 cut(s) 5, 111, 649, 832, 1213
HpaII CCGG 7 cut(s) 327, 653, 683, 758, 777, 1056, 1178
HphI GGTGA 4 cut(s) 106, 908, 973, 1233
Hpy166II GTNNAC 3 cut(s) 166, 370, 1073
Hpy188I TCNGA 5 cut(s) 266, 541, 751, 1146, 1212
Hpy188III TCNNGA 5 cut(s) 47, 173, 200, 653, 1178
Hpy8I GTNNAC 3 cut(s) 166, 370, 1073
Hpy99I CGWCG 7 cut(s) 44, 167, 170, 179, 206, 416, 485
HpyAV CCTTC 1 cut(s) 1256
HpyCH4III ACNGT 3 cut(s) 374, 427, 887
HpyCH4IV ACGT 7 cut(s) 162, 168, 356, 366, 480, 489, 1238
HpyCH4V TGCA 1 cut(s) 621
HpyF10VI GCNNNNNNNGC 7 cut(s) 106, 237, 383, 553, 560, 668, 1225
HpyF3I CTNAG 1 cut(s) 663
HpySE526I ACGT 7 cut(s) 162, 168, 356, 366, 480, 489, 1238
Hsp92I GRCGYC 4 cut(s) 39, 147, 177, 204
Hsp92II CATG 5 cut(s) 385, 424, 535, 800, 1273
HspAI GCGC 6 cut(s) 214, 554, 632, 671, 794, 1301
Kpn2I TCCGGA 2 cut(s) 652, 1177
KspI CCGCGG 2 cut(s) 232, 447
Kzo9I GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 1 cut(s) 191
Lsp1109I GCAGC 1 cut(s) 445
LweI GCATC 2 cut(s) 858, 1296
MabI ACCWGGT 1 cut(s) 957
MaeI CTAG 1 cut(s) 593
MaeII ACGT 7 cut(s) 162, 168, 356, 366, 480, 489, 1238
MaeIII GTNAC 7 cut(s) 341, 352, 427, 914, 1016, 1158, 1239
MalI GATC 7 cut(s) 57, 123, 198, 268, 410, 681, 1290
MbiI CCGCTC 1 cut(s) 186
MboI GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
MboII GAAGA 7 cut(s) 98, 214, 265, 418, 514, 700, 819
MflI RGATCY 1 cut(s) 55
MhlI GDGCHC 4 cut(s) 379, 590, 664, 1191
MlsI TGGCCA 1 cut(s) 515
MluCI AATT 4 cut(s) 451, 719, 861, 964
MluNI TGGCCA 1 cut(s) 515
MlyI GAGTC 1 cut(s) 643
MmeI TCCRAC 3 cut(s) 486, 498, 729
Mox20I TGGCCA 1 cut(s) 515
MroI TCCGGA 2 cut(s) 652, 1177
MroXI GAANNNNTTC 1 cut(s) 865
MscI TGGCCA 1 cut(s) 515
MslI CAYNNNNRTG 1 cut(s) 801
Msp20I TGGCCA 1 cut(s) 515
MspA1I CMGCKG 2 cut(s) 231, 446
MspI CCGG 7 cut(s) 327, 653, 683, 758, 777, 1056, 1178
MspR9I CCNGG 8 cut(s) 759, 777, 778, 837, 855, 936, 959, 1032
MvaI CCWGG 5 cut(s) 837, 855, 936, 959, 1032
MvnI CGCG 2 cut(s) 231, 446
MwoI GCNNNNNNNGC 7 cut(s) 106, 237, 383, 553, 560, 668, 1225
NciI CCSGG 3 cut(s) 759, 777, 778
NdeII GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
NlaIII CATG 5 cut(s) 385, 424, 535, 800, 1273
NlaIV GGNNCC 7 cut(s) 57, 588, 775, 787, 819, 1054, 1257
NmeAIII GCCGAG 1 cut(s) 216
NmuCI GTSAC 4 cut(s) 352, 427, 914, 1239
NsbI TGCGCA 1 cut(s) 795
NspI RCATGY 2 cut(s) 535, 1273
NspV TTCGAA 1 cut(s) 455
PciSI GCTCTTC 1 cut(s) 227
PcsI WCGNNNNNNNCGW 5 cut(s) 36, 171, 198, 312, 486
PdmI GAANNNNTTC 1 cut(s) 865
PfeI GAWTC 3 cut(s) 111, 832, 1213
PflFI GACNNNGTC 1 cut(s) 179
PflMI CCANNNNNTGG 3 cut(s) 925, 929, 1106
PkrI GCNGC 4 cut(s) 233, 419, 435, 670
PleI GAGTC 1 cut(s) 643
PpsI GAGTC 1 cut(s) 643
PpuMI RGGWCCY 1 cut(s) 773
Psp5II RGGWCCY 1 cut(s) 773
Psp6I CCWGG 5 cut(s) 835, 853, 934, 957, 1030
PspEI GGTNACC 2 cut(s) 914, 1158
PspFI CCCAGC 3 cut(s) 210, 240, 1085
PspGI CCWGG 5 cut(s) 835, 853, 934, 957, 1030
PspN4I GGNNCC 7 cut(s) 57, 588, 775, 787, 819, 1054, 1257
PspOMI GGGCCC 1 cut(s) 586
PspPPI RGGWCCY 1 cut(s) 773
PsuI RGATCY 1 cut(s) 55
PsyI GACNNNGTC 1 cut(s) 179
RsaI GTAC 4 cut(s) 569, 845, 1117, 1274
RsaNI GTAC 4 cut(s) 568, 844, 1116, 1273
RseI CAYNNNNRTG 1 cut(s) 801
SacII CCGCGG 2 cut(s) 232, 447
SalI GTCGAC 1 cut(s) 164
SapI GCTCTTC 1 cut(s) 227
SatI GCNGC 4 cut(s) 232, 418, 434, 669
Sau3AI GATC 7 cut(s) 55, 121, 196, 266, 408, 679, 1288
SchI GAGTC 1 cut(s) 643
ScrFI CCNGG 8 cut(s) 759, 777, 778, 837, 855, 936, 959, 1032
SduI GDGCHC 4 cut(s) 379, 590, 664, 1191
SexAI ACCWGGT 1 cut(s) 957
SfaNI GCATC 2 cut(s) 858, 1296
Sfr303I CCGCGG 2 cut(s) 232, 447
SfuI TTCGAA 1 cut(s) 455
SgrBI CCGCGG 2 cut(s) 232, 447
SgrDI CGTCGACG 1 cut(s) 164
SinI GGWCC 2 cut(s) 773, 1097
SmaI CCCGGG 1 cut(s) 778
SmiMI CAYNNNNRTG 1 cut(s) 801
SmlI CTYRAG 1 cut(s) 1260
SmoI CTYRAG 1 cut(s) 1260
Sse9I AATT 4 cut(s) 451, 719, 861, 964
SspMI CTAG 1 cut(s) 593
StyD4I CCNGG 8 cut(s) 757, 775, 776, 835, 853, 934, 957, 1030
StyI CCWWGG 2 cut(s) 336, 1250
TaaI ACNGT 3 cut(s) 374, 427, 887
TaiI ACGT 7 cut(s) 165, 171, 359, 369, 483, 492, 1241
TaqI TCGA 9 cut(s) 105, 132, 165, 174, 315, 411, 455, 696, 830
TasI AATT 4 cut(s) 451, 719, 861, 964
TauI GCSGC 3 cut(s) 234, 420, 671
TfiI GAWTC 3 cut(s) 111, 832, 1213
TscAI CASTG 2 cut(s) 379, 892
TseFI GTSAC 4 cut(s) 352, 427, 914, 1239
TseI GCWGC 1 cut(s) 433
Tsp45I GTSAC 4 cut(s) 352, 427, 914, 1239
TspDTI ATGAA 1 cut(s) 214
TspGWI ACGGA 1 cut(s) 68
TspMI CCCGGG 1 cut(s) 776
TspRI CASTG 2 cut(s) 379, 892
Tth111I GACNNNGTC 1 cut(s) 179
Van91I CCANNNNNTGG 3 cut(s) 925, 929, 1106
VpaK11BI GGWCC 2 cut(s) 773, 1097
XapI RAATTY 2 cut(s) 451, 964
XceI RCATGY 2 cut(s) 535, 1273
XcmI CCANNNNNNNNNTGG 2 cut(s) 926, 1229
XmaI CCCGGG 1 cut(s) 776
XmiI GTMKAC 1 cut(s) 165
XmnI GAANNNNTTC 1 cut(s) 865
XspI CTAG 1 cut(s) 593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.