RLG00000033308

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000611
Physical Location & Seq
Forward (+)
25565601 .. 25572869
7269 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033308

Sequence Viewer

Length: 1527 bp
ATGGACCCAACCAAGAAGCGCAAGCTCGACGAGAACGGCGTCGTTTTGGACACCGACCCCTCCATCCCCAAGCTCGATCGCGAAGACGCCCGGAAAATCATCGAGCGATTCACCCCCGATCAGCTCATCGACGTCCTCCTCGACGCCATCTCCCGCCACTCCGACGTCCTCGACGCCGTCCGATTGATCGCCGATCCCGACACCGCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCACCACCGAGGGCCTCCGCAGCCTCTTCTCCGCCTACGGAGAGCTCGAGGAAGCCATCGTCATTCTCGACAAGAACACCGGCAAGAGCAAAGGCTACGGCTTCGTCACCTTCAAGCACGTCGACGCCGCCTACCTCGCCCTCAAGGAGCCCAGCAAGAAGATCGACGGCCGCATGACCGTCACGCAGCTCGCCGCCGCCGGCAACCAGGGCTCCACCACCGCCTCCGTCAACCCCGTCGACGTGTCGCTACGGAAGATCTACGTGGCCAATGTGCCGTATGAGATGGCGGCGGATAAGCTGCTGGCGCATTTCGCACAGTACGGCGAGGTTGAGGAGGGGCCGCTAGGGTTTGATAAGCAGACCGGCAAGTGCAAAGGCTATGCTTTGTTTGTGTATAAGTCTCCGGAGGGTGCGCAGAAGGCGCTGGTTGATCCGATTAAGAACATTGAGGGCAGGCAGTTGAATTGTAAGTTTGCTAGTGATGGGAAGAAGCCCAAGATGGGTGGCGGCGGTGCCGACGGTGGTGCCGGTCAGGGGTCGGTGGGTGGACCGAATGCCCATGGAGATGGGATGGGGATGGCTCCGCCGTCGTCCATGCCTGGGCAGTATGGCGGGCCCGGTGGGTTTGGGTATGGGGGGTTTTCGGGTGGCCAACCGCCCTTGGGGCATCATCCTCTGGGTGGACCGGGTCTGTCATCTGTGGGAAATCAGGGGCCGGGGAGTGGTGGGTATGGTTCTGGGCTGGGTGGTGCTTATAATTACGGTGGGCCAGGTTCTACAGGATATGGTTTGGGTGGTGCTGGTGGGTTGGGTGGAGTTGGTGGTGGTGGACTAGGTAGTGGAGGCCTGGGTGGTGGAGCTCCTGGTAGCGGCACTGGTGAATCAACACCACCAGCCAGGTACATCACCCTTGCCAAGGGTTCCTCCCGGGGGAATGTATCCCAATGCACCGTATTACTGAGGTGTATGACCGCTTGTTGGGAGCTGATGCTTTATGTGGTTCTGGTGATATGCGTGATTGCAGAGTTTATGCTCTCGTTTGATGATTGTATTAGCTGTGCTTTTATCGCCACTTCCTCTGTGCATCTGCACCTTTTAAGATGTAGGTGGTTTGAAGGAGTGATTGAATTTGTGAGTGGTTGTGGAATATCTGCAATGATTGAGGCAGACCTAGTTTTCCCTGTTTCTGTGGTTCCTATAGTAAAATGGGATGGTGCTCAACTCACCACCTGCTACAGTTCCGGTTGTCAAGACCTTGCTTTCCTGGTTCTGTACATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009692 GO:0009693 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032496 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070935 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090693 GO:0097159 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902369 GO:1902373 GO:1903311 GO:1903312
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

509

Amino Acids

52.66

Weight (kDa)

5.95

Isoelectric Point (pI)

28.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 73 - 139 1.1e-15 RNA recognition motif
RRM_1 PF00076 168 - 225 1.1e-09 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1002
AarI CACCTGC 1 cut(s) 1484
AatII GACGTC 2 cut(s) 135, 168
Acc16I TGCGCA 1 cut(s) 660
Acc36I ACCTGC 1 cut(s) 1484
AccB1I GGYRCC 2 cut(s) 758, 770
AccI GTMKAC 2 cut(s) 366, 483
AccII CGCG 2 cut(s) 81, 228
AccIII TCCGGA 1 cut(s) 649
AclWI GGATC 2 cut(s) 188, 671
AcoI YGGCCR 3 cut(s) 412, 510, 895
AcsI RAATTY 1 cut(s) 1373
AcyI GRCGYC 7 cut(s) 39, 87, 132, 144, 165, 174, 369
AfaI GTAC 3 cut(s) 566, 1148, 1520
AflIII ACRYGT 1 cut(s) 486
AgsI TTSAA 4 cut(s) 358, 709, 1361, 1373
AjiI CACGTC 2 cut(s) 364, 487
AjnI CCWGG 7 cut(s) 450, 844, 1015, 1092, 1108, 1142, 1509
Alw21I GWGCWC 3 cut(s) 291, 1108, 1465
Alw26I GTCTC 1 cut(s) 651
AlwI GGATC 2 cut(s) 188, 671
Ama87I CYCGRG 2 cut(s) 290, 1173
Aor13HI TCCGGA 1 cut(s) 649
ApaI GGGCCC 1 cut(s) 864
ApeKI GCWGC 3 cut(s) 264, 430, 544
ApoI RAATTY 1 cut(s) 1373
AspLEI GCGC 5 cut(s) 21, 213, 553, 661, 670
AspS9I GGNCC 9 cut(s) 4, 256, 584, 794, 860, 861, 929, 959, 1013
AsuC2I CCSGG 6 cut(s) 91, 864, 933, 963, 1174, 1175
AsuHPI GGTGA 6 cut(s) 103, 343, 1136, 1144, 1264, 1462
AvaI CYCGRG 2 cut(s) 290, 1173
AvaII GGWCC 3 cut(s) 4, 794, 929
BaeGI GKGCMC 1 cut(s) 864
BalI TGGCCA 2 cut(s) 512, 897
BanI GGYRCC 2 cut(s) 758, 770
BanII GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 3 cut(s) 291, 1108, 1465
BbvI GCAGC 3 cut(s) 276, 442, 531
BceAI ACGGC 7 cut(s) 52, 161, 358, 427, 505, 583, 817
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 752, 786
BciT130I CCWGG 7 cut(s) 452, 846, 1017, 1094, 1110, 1144, 1511
BciVI GTATCC 1 cut(s) 1195
BcnI CCSGG 6 cut(s) 91, 864, 933, 963, 1174, 1175
BcoDI GTCTC 1 cut(s) 651
BfaI CTAG 4 cut(s) 590, 723, 1079, 1418
BfmI CTRYAG 3 cut(s) 1023, 1443, 1480
BfoI RGCGCY 1 cut(s) 671
BfuAI ACCTGC 1 cut(s) 1484
BfuI GTATCC 1 cut(s) 1195
BglI GCCNNNNNGGC 1 cut(s) 910
BglII AGATCT 1 cut(s) 501
Bme18I GGWCC 3 cut(s) 4, 794, 929
BmeT110I CYCGRG 2 cut(s) 290, 1173
BmgBI CACGTC 2 cut(s) 364, 487
BmgT120I GGNCC 9 cut(s) 4, 256, 584, 794, 860, 861, 929, 959, 1013
BmsI GCATC 3 cut(s) 922, 1224, 1339
BpiI GAAGAC 1 cut(s) 90
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 6 cut(s) 91, 864, 933, 963, 1174, 1175
BsaAI YACGTR 1 cut(s) 508
BsaHI GRCGYC 7 cut(s) 39, 87, 132, 144, 165, 174, 369
BsaWI WCCGGW 2 cut(s) 649, 1487
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 440, 470
Bse118I RCCGGY 4 cut(s) 323, 443, 608, 773
Bse1I ACTGG 1 cut(s) 1126
Bse3DI GCAATG 1 cut(s) 1407
BseAI TCCGGA 1 cut(s) 649
BseBI CCWGG 7 cut(s) 452, 846, 1017, 1094, 1110, 1144, 1511
BseGI GGATG 6 cut(s) 63, 222, 822, 828, 916, 1462
BseMI GCAATG 1 cut(s) 1407
BseMII CTCAG 1 cut(s) 1196
BseNI ACTGG 1 cut(s) 1126
BseRI GAGGAG 2 cut(s) 128, 593
BseSI GKGCMC 1 cut(s) 864
BseX3I CGGCCG 1 cut(s) 412
BseXI GCAGC 3 cut(s) 276, 442, 531
BseYI CCCAGC 4 cut(s) 207, 237, 395, 988
BsgI GTGCAG 1 cut(s) 1319
Bsh1236I CGCG 2 cut(s) 81, 228
Bsh1285I CGRYCG 2 cut(s) 79, 415
BshNI GGYRCC 2 cut(s) 758, 770
BsiEI CGRYCG 2 cut(s) 79, 415
BsiHKAI GWGCWC 3 cut(s) 291, 1108, 1465
BsiHKCI CYCGRG 2 cut(s) 290, 1173
BslFI GGGAC 1 cut(s) 254
BsmAI GTCTC 1 cut(s) 651
BsmFI GGGAC 1 cut(s) 254
BsmI GAATGC 1 cut(s) 805
BsoBI CYCGRG 2 cut(s) 290, 1173
Bsp120I GGGCCC 1 cut(s) 860
Bsp1286I GDGCHC 6 cut(s) 291, 396, 458, 864, 1108, 1465
Bsp13I TCCGGA 1 cut(s) 649
Bsp1407I TGTACA 1 cut(s) 1518
Bsp143I GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
Bsp19I CCATGG 1 cut(s) 805
Bsp68I TCGCGA 1 cut(s) 81
BspCNI CTCAG 1 cut(s) 1197
BspEI TCCGGA 1 cut(s) 649
BspFNI CGCG 2 cut(s) 81, 228
BspMI ACCTGC 1 cut(s) 1484
BspPI GGATC 2 cut(s) 188, 671
BspQI GCTCTTC 1 cut(s) 224
BspT107I GGYRCC 2 cut(s) 758, 770
BsrDI GCAATG 1 cut(s) 1407
BsrFI RCCGGY 4 cut(s) 323, 443, 608, 773
BsrGI TGTACA 1 cut(s) 1518
BsrI ACTGG 1 cut(s) 1126
BssAI RCCGGY 4 cut(s) 323, 443, 608, 773
BssMI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
BssNI GRCGYC 7 cut(s) 39, 87, 132, 144, 165, 174, 369
BssT1I CCWWGG 3 cut(s) 805, 906, 1161
Bst2UI CCWGG 7 cut(s) 452, 846, 1017, 1094, 1110, 1144, 1511
Bst4CI ACNGT 6 cut(s) 424, 564, 767, 1010, 1198, 1484
Bst6I CTCTTC 2 cut(s) 224, 275
BstACI GRCGYC 7 cut(s) 39, 87, 132, 144, 165, 174, 369
BstAUI TGTACA 1 cut(s) 1518
BstBAI YACGTR 1 cut(s) 508
BstC8I GCNNGC 7 cut(s) 23, 215, 435, 445, 549, 701, 860
BstDEI CTNAG 1 cut(s) 1205
BstDSI CCRYGG 2 cut(s) 226, 805
BstENI CCTNNNNNAGG 1 cut(s) 1160
BstF5I GGATG 6 cut(s) 63, 222, 822, 828, 916, 1462
BstFNI CGCG 2 cut(s) 81, 228
BstH2I RGCGCY 1 cut(s) 671
BstHHI GCGC 5 cut(s) 21, 213, 553, 661, 670
BstKTI GATC 7 cut(s) 79, 121, 189, 196, 408, 504, 679
BstMAI GTCTC 1 cut(s) 651
BstMBI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
BstMCI CGRYCG 2 cut(s) 79, 415
BstNI CCWGG 7 cut(s) 452, 846, 1017, 1094, 1110, 1144, 1511
BstSFI CTRYAG 3 cut(s) 1023, 1443, 1480
BstSLI GKGCMC 1 cut(s) 864
BstUI CGCG 2 cut(s) 81, 228
BstV1I GCAGC 3 cut(s) 276, 442, 531
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 1 cut(s) 501
BstXI CCANNNNNNTGG 1 cut(s) 812
BstYI RGATCY 1 cut(s) 501
BstZI CGGCCG 1 cut(s) 412
BsuI GTATCC 1 cut(s) 1195
BtgI CCRYGG 2 cut(s) 226, 805
BtrI CACGTC 2 cut(s) 364, 487
BtsCI GGATG 6 cut(s) 63, 222, 822, 828, 916, 1462
BtsIMutI CAGTG 1 cut(s) 1119
BtuMI TCGCGA 1 cut(s) 81
BveI ACCTGC 1 cut(s) 1484
Cac8I GCNNGC 7 cut(s) 23, 215, 435, 445, 549, 701, 860
CfoI GCGC 5 cut(s) 21, 213, 553, 661, 670
Cfr10I RCCGGY 4 cut(s) 323, 443, 608, 773
Cfr13I GGNCC 9 cut(s) 4, 256, 584, 794, 860, 861, 929, 959, 1013
Cfr42I CCGCGG 1 cut(s) 229
Cfr9I CCCGGG 1 cut(s) 1173
CseI GACGC 5 cut(s) 28, 95, 152, 182, 377
Csp6I GTAC 3 cut(s) 565, 1147, 1519
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviAII CATG 3 cut(s) 418, 806, 841
CviQI GTAC 3 cut(s) 565, 1147, 1519
DdeI CTNAG 1 cut(s) 1205
DpnI GATC 7 cut(s) 78, 120, 188, 195, 407, 503, 678
DpnII GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
EaeI YGGCCR 3 cut(s) 412, 510, 895
EagI CGGCCG 1 cut(s) 412
Eam1104I CTCTTC 2 cut(s) 224, 275
EarI CTCTTC 2 cut(s) 224, 275
EciI GGCGGA 3 cut(s) 265, 551, 819
Ecl136II GAGCTC 2 cut(s) 289, 1106
EclXI CGGCCG 1 cut(s) 412
Eco130I CCWWGG 3 cut(s) 805, 906, 1161
Eco147I AGGCCT 1 cut(s) 1092
Eco24I GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
Eco47I GGWCC 3 cut(s) 4, 794, 929
Eco52I CGGCCG 1 cut(s) 412
Eco53kI GAGCTC 2 cut(s) 289, 1106
Eco88I CYCGRG 2 cut(s) 290, 1173
EcoICRI GAGCTC 2 cut(s) 289, 1106
EcoNI CCTNNNNNAGG 1 cut(s) 1160
EcoO109I RGGNCCY 1 cut(s) 256
EcoRII CCWGG 7 cut(s) 450, 844, 1015, 1092, 1108, 1142, 1509
EcoT14I CCWWGG 3 cut(s) 805, 906, 1161
EcoT38I GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
ErhI CCWWGG 3 cut(s) 805, 906, 1161
FaeI CATG 3 cut(s) 421, 809, 844
FaqI GGGAC 1 cut(s) 254
FatI CATG 3 cut(s) 417, 805, 840
FauI CCCGC 2 cut(s) 161, 851
FblI GTMKAC 2 cut(s) 366, 483
FokI GGATG 6 cut(s) 50, 209, 829, 835, 903, 1469
FriOI GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
FspBI CTAG 4 cut(s) 590, 723, 1079, 1418
FspI TGCGCA 1 cut(s) 660
GlaI GCGC 5 cut(s) 20, 212, 552, 660, 669
GsaI CCCAGC 4 cut(s) 211, 241, 399, 992
HaeII RGCGCY 1 cut(s) 671
HgaI GACGC 5 cut(s) 28, 95, 152, 182, 377
HhaI GCGC 5 cut(s) 21, 213, 553, 661, 670
Hin1I GRCGYC 7 cut(s) 39, 87, 132, 144, 165, 174, 369
Hin1II CATG 3 cut(s) 421, 809, 844
Hin6I GCGC 5 cut(s) 19, 211, 551, 659, 668
HinP1I GCGC 5 cut(s) 19, 211, 551, 659, 668
HincII GTYRAC 3 cut(s) 367, 475, 484
HindII GTYRAC 3 cut(s) 367, 475, 484
HinfI GANTC 2 cut(s) 108, 1127
HphI GGTGA 6 cut(s) 103, 343, 1136, 1144, 1264, 1462
Hpy166II GTNNAC 6 cut(s) 367, 475, 484, 794, 929, 1076
Hpy188I TCNGA 3 cut(s) 163, 182, 681
Hpy188III TCNNGA 5 cut(s) 80, 197, 311, 650, 1496
Hpy8I GTNNAC 6 cut(s) 367, 475, 484, 794, 929, 1076
HpyAV CCTTC 3 cut(s) 364, 658, 1355
HpyCH4III ACNGT 6 cut(s) 424, 564, 767, 1010, 1198, 1484
HpyCH4IV ACGT 5 cut(s) 132, 165, 363, 486, 507
HpyCH4V TGCA 6 cut(s) 618, 1194, 1268, 1330, 1336, 1400
HpyF3I CTNAG 1 cut(s) 1205
HpySE526I ACGT 5 cut(s) 132, 165, 363, 486, 507
Hsp92I GRCGYC 7 cut(s) 39, 87, 132, 144, 165, 174, 369
Hsp92II CATG 3 cut(s) 421, 809, 844
HspAI GCGC 5 cut(s) 19, 211, 551, 659, 668
Kpn2I TCCGGA 1 cut(s) 649
KroI GCCGGC 1 cut(s) 443
KroNI GCCGGC 1 cut(s) 445
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
LguI GCTCTTC 1 cut(s) 224
LmnI GCTCC 6 cut(s) 391, 461, 832, 1103, 1111, 1228
Lsp1109I GCAGC 3 cut(s) 276, 442, 531
LweI GCATC 3 cut(s) 922, 1224, 1339
MaeI CTAG 4 cut(s) 590, 723, 1079, 1418
MaeII ACGT 5 cut(s) 132, 165, 363, 486, 507
MaeIII GTNAC 2 cut(s) 349, 424
MalI GATC 7 cut(s) 78, 120, 188, 195, 407, 503, 678
MboI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
MboII GAAGA 6 cut(s) 95, 211, 262, 415, 511, 745
MflI RGATCY 1 cut(s) 501
MhlI GDGCHC 6 cut(s) 291, 396, 458, 864, 1108, 1465
MlsI TGGCCA 2 cut(s) 512, 897
MluCI AATT 3 cut(s) 709, 1003, 1373
MluNI TGGCCA 2 cut(s) 512, 897
MmeI TCCRAC 1 cut(s) 186
Mox20I TGGCCA 2 cut(s) 512, 897
MroI TCCGGA 1 cut(s) 649
MroNI GCCGGC 1 cut(s) 443
MscI TGGCCA 2 cut(s) 512, 897
MseI TTAA 2 cut(s) 684, 1343
MslI CAYNNNNRTG 1 cut(s) 810
Msp20I TGGCCA 2 cut(s) 512, 897
MspA1I CMGCKG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 7 cut(s) 452, 846, 1017, 1094, 1110, 1144, 1511
MvnI CGCG 2 cut(s) 81, 228
NaeI GCCGGC 1 cut(s) 445
NciI CCSGG 6 cut(s) 91, 864, 933, 963, 1174, 1175
NcoI CCATGG 1 cut(s) 805
NdeII GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
NgoMIV GCCGGC 1 cut(s) 443
NlaIII CATG 3 cut(s) 421, 809, 844
NmeAIII GCCGAG 1 cut(s) 213
NmuCI GTSAC 2 cut(s) 349, 424
NruI TCGCGA 1 cut(s) 81
NsbI TGCGCA 1 cut(s) 660
PaeR7I CTCGAG 1 cut(s) 290
PaqCI CACCTGC 1 cut(s) 1484
PceI AGGCCT 1 cut(s) 1092
PciSI GCTCTTC 1 cut(s) 224
PcsI WCGNNNNNNNCGW 5 cut(s) 36, 138, 195, 288, 309
PctI GAATGC 1 cut(s) 805
PdiI GCCGGC 1 cut(s) 445
PfeI GAWTC 2 cut(s) 108, 1127
PflFI GACNNNGTC 2 cut(s) 176, 933
Ple19I CGATCG 1 cut(s) 79
Ppu21I YACGTR 1 cut(s) 508
PsiI TTATAA 1 cut(s) 1002
Psp124BI GAGCTC 2 cut(s) 291, 1108
Psp6I CCWGG 7 cut(s) 450, 844, 1015, 1092, 1108, 1142, 1509
PspFI CCCAGC 4 cut(s) 207, 237, 395, 988
PspGI CCWGG 7 cut(s) 450, 844, 1015, 1092, 1108, 1142, 1509
PspOMI GGGCCC 1 cut(s) 860
PspPI GGNCC 9 cut(s) 4, 256, 584, 794, 860, 861, 929, 959, 1013
PspXI VCTCGAGB 1 cut(s) 290
PsuI RGATCY 1 cut(s) 501
PsyI GACNNNGTC 2 cut(s) 176, 933
PvuI CGATCG 1 cut(s) 79
RruI TCGCGA 1 cut(s) 81
RsaI GTAC 3 cut(s) 566, 1148, 1520
RsaNI GTAC 3 cut(s) 565, 1147, 1519
RseI CAYNNNNRTG 1 cut(s) 810
SacI GAGCTC 2 cut(s) 291, 1108
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 2 cut(s) 365, 482
SapI GCTCTTC 1 cut(s) 224
SaqAI TTAA 2 cut(s) 684, 1343
Sau3AI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
Sau96I GGNCC 9 cut(s) 4, 256, 584, 794, 860, 861, 929, 959, 1013
SduI GDGCHC 6 cut(s) 291, 396, 458, 864, 1108, 1465
SfaNI GCATC 3 cut(s) 922, 1224, 1339
SfcI CTRYAG 3 cut(s) 1023, 1443, 1480
Sfr274I CTCGAG 1 cut(s) 290
Sfr303I CCGCGG 1 cut(s) 229
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 2 cut(s) 365, 482
SinI GGWCC 3 cut(s) 4, 794, 929
SlaI CTCGAG 1 cut(s) 290
SmaI CCCGGG 1 cut(s) 1175
SmiMI CAYNNNNRTG 1 cut(s) 810
SmlI CTYRAG 2 cut(s) 290, 386
SmoI CTYRAG 2 cut(s) 290, 386
Sse9I AATT 3 cut(s) 709, 1003, 1373
SseBI AGGCCT 1 cut(s) 1092
SspMI CTAG 4 cut(s) 590, 723, 1079, 1418
SstI GAGCTC 2 cut(s) 291, 1108
StuI AGGCCT 1 cut(s) 1092
StyI CCWWGG 3 cut(s) 805, 906, 1161
TaaI ACNGT 6 cut(s) 424, 564, 767, 1010, 1198, 1484
TaiI ACGT 5 cut(s) 135, 168, 366, 489, 510
TaqII GACCGA 1 cut(s) 811
TasI AATT 3 cut(s) 709, 1003, 1373
TatI WGTACW 1 cut(s) 1518
TauI GCSGC 9 cut(s) 231, 374, 417, 440, 443, 536, 589, 756, 1119
TfiI GAWTC 2 cut(s) 108, 1127
Tru1I TTAA 2 cut(s) 684, 1343
Tru9I TTAA 2 cut(s) 684, 1343
TscAI CASTG 1 cut(s) 1126
TseFI GTSAC 2 cut(s) 349, 424
TseI GCWGC 3 cut(s) 264, 430, 544
Tsp45I GTSAC 2 cut(s) 349, 424
TspDTI ATGAA 1 cut(s) 211
TspGWI ACGGA 3 cut(s) 297, 460, 511
TspMI CCCGGG 1 cut(s) 1173
TspRI CASTG 1 cut(s) 1126
Tth111I GACNNNGTC 2 cut(s) 176, 933
VpaK11BI GGWCC 3 cut(s) 4, 794, 929
XagI CCTNNNNNAGG 1 cut(s) 1160
XapI RAATTY 1 cut(s) 1373
XhoI CTCGAG 1 cut(s) 290
XmaI CCCGGG 1 cut(s) 1173
XmiI GTMKAC 2 cut(s) 366, 483
XspI CTAG 4 cut(s) 590, 723, 1079, 1418
ZraI GACGTC 2 cut(s) 133, 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.