Rh5BG218000

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000611
Physical Location & Seq
Forward (+)
25172224 .. 25178771
6548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG218000.1

Sequence Viewer

Length: 1305 bp
ATGGACCCAACCAAGAAGCGCAAGCTCGACGAGAACGGCGTCGTTTTGGACACCGACCCCTCCATCCCCAAGCTCGATCGCGAAGACGCCCGGAAAATCATCGAGCGATTCACCCCCGATCAGCTCATCGACGTTCTCCTCGACGCCATCTCCCGCCACTCCGACGTCCTCGACGCCGTCCGATTGATCGCCGATCCCGACACCGCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCACCACCGAGGGCCTCCGCAGCCTCTTCTCCGCCTACGGCGAGCTCGAGGAAGCCATCGTCATTCTCGACAAGAACACCGGCAAGAGCAAAGGCTACGGCTTCGTCACCTTCAAGCACGTCGACGCCGCCTACCTCGCCCTCAAGGAGCCCAGCAAGAAGATCGACGGCCGCATGACCGTCACCCAGCTCGCCGCCGCCGGCAACCAGGGCTCCACCACCGCCTCCGTCAACCCCGTCGACGTCTCGCTCCGGAAGATCTACGTGGCCAATGTGCCGTATGAGATGGCGGCGGATAAGCTGCTGGCGCATTTCGCACAGTACGGCGAGGTTGAGGAGGGGCCGCTAGGGTTTGATAAGCAGACCGGCAAGTGCAAAGGCTATGCTTTGTTTGTGTACAAGTCTCCGGAGGGCGCGCAGAAGGCCCTGGTTGATCCGATTAAGAACATTGAGGGGAGGCAGTTGAATTGTAAGTTTGCTAGCGATGGGAAGAAGCCCAAGATGGGTGGCGGCGGTGCCGACGGTGGTGCCGGTCAGGGGTCCGTGGGTGGACCGAATGCCCATGGAGATGGGATGGGGATGGCTCCGCCGTCCTCGATGCCTGGGCAGTATGGCGGCCCCGGTGGGTTTGGGTATGGGGGGTTTTCGGGTGGCCAACCTCCGTTGGGGCATCATCCTCTGGGTGGACCGGGGCTGTCATCTGTGGGAAATCAGGGGCCGGGGAGTGGTGGGTATGGTTCAGGGCTGGGTGGTGCTTATAATTACGGTGGGCCGGGTTCTGCAGGATATGGTTTGGGTGGTGCCGGTGGGTTGGGTGGAGTTGGTGGTGGTGGACTAGGTAGTGGAGGCCTGGGTGGTGGAGCTCCTGGTAGCGGCACTGGTGGTACTGGGTCGTCTTTGTATGGATTGCCACCGAGCTCAGGTGGGTTGCCTTCTGGTAGGTATCCTGAGGGTGGACCTTATGGCCTGTCAGCATTTCAGAATCAACACCACCAGCCAGGTACATCACCCTTGCCGAGGGTTCCTCCCGGGGGAATGTATCCCAATGCACCGTATTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009692 GO:0009693 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032496 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070935 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090693 GO:0097159 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902369 GO:1902373 GO:1903311 GO:1903312
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

434

Amino Acids

44.07

Weight (kDa)

7.09

Isoelectric Point (pI)

28.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 73 - 139 7.8e-16 RNA recognition motif
RRM_1 PF00076 168 - 225 9.1e-10 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1002
AatII GACGTC 2 cut(s) 168, 489
AccB1I GGYRCC 3 cut(s) 758, 770, 1043
AccI GTMKAC 2 cut(s) 366, 483
AccII CGCG 3 cut(s) 81, 228, 659
AccIII TCCGGA 2 cut(s) 495, 649
AclWI GGATC 2 cut(s) 188, 671
AcoI YGGCCR 3 cut(s) 412, 510, 895
AcyI GRCGYC 7 cut(s) 39, 87, 144, 165, 174, 369, 486
AfaI GTAC 4 cut(s) 566, 641, 1129, 1246
AgsI TTSAA 2 cut(s) 358, 709
AjiI CACGTC 1 cut(s) 364
AjnI CCWGG 6 cut(s) 450, 669, 844, 1092, 1108, 1240
AluBI AGCT 9 cut(s) 25, 73, 124, 217, 289, 433, 544, 1106, 1161
AluI AGCT 9 cut(s) 25, 73, 124, 217, 289, 433, 544, 1106, 1161
Alw21I GWGCWC 3 cut(s) 291, 1108, 1163
Alw26I GTCTC 2 cut(s) 493, 651
AlwI GGATC 2 cut(s) 188, 671
Ama87I CYCGRG 2 cut(s) 290, 1271
Aor13HI TCCGGA 2 cut(s) 495, 649
ApeKI GCWGC 2 cut(s) 264, 544
AspLEI GCGC 5 cut(s) 21, 213, 553, 659, 661
AsuC2I CCSGG 7 cut(s) 91, 864, 933, 963, 1017, 1272, 1273
AsuHPI GGTGA 4 cut(s) 103, 343, 418, 1242
AsuNHI GCTAGC 1 cut(s) 722
AvaI CYCGRG 2 cut(s) 290, 1271
AvaII GGWCC 5 cut(s) 4, 783, 794, 929, 1199
AxyI CCTNAGG 1 cut(s) 1191
BalI TGGCCA 2 cut(s) 512, 897
BanI GGYRCC 3 cut(s) 758, 770, 1043
BanII GRGCYC 5 cut(s) 291, 396, 458, 1108, 1163
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 3 cut(s) 291, 1108, 1163
BbvI GCAGC 2 cut(s) 276, 531
BccI CCATC 9 cut(s) 71, 155, 308, 523, 722, 739, 806, 811, 817
BceAI ACGGC 8 cut(s) 52, 161, 298, 358, 427, 505, 583, 817
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 752, 786
BciT130I CCWGG 6 cut(s) 452, 671, 846, 1094, 1110, 1242
BciVI GTATCC 2 cut(s) 1197, 1293
BcnI CCSGG 7 cut(s) 91, 864, 933, 963, 1017, 1272, 1273
BcoDI GTCTC 2 cut(s) 493, 651
BfaI CTAG 3 cut(s) 590, 723, 1079
BfmI CTRYAG 1 cut(s) 1023
BfuI GTATCC 2 cut(s) 1197, 1293
BglII AGATCT 1 cut(s) 501
Bme18I GGWCC 5 cut(s) 4, 783, 794, 929, 1199
BmeT110I CYCGRG 2 cut(s) 290, 1271
BmgBI CACGTC 1 cut(s) 364
BmrI ACTGGG 1 cut(s) 1140
BmsI GCATC 2 cut(s) 831, 922
BmtI GCTAGC 1 cut(s) 726
BmuI ACTGGG 1 cut(s) 1140
BpiI GAAGAC 1 cut(s) 90
BplI GAGNNNNNCTC 2 cut(s) 1252, 1284
Bpu10I CCTNAGC 1 cut(s) 1162
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 7 cut(s) 91, 864, 933, 963, 1017, 1272, 1273
BsaAI YACGTR 1 cut(s) 508
BsaHI GRCGYC 7 cut(s) 39, 87, 144, 165, 174, 369, 486
BsaWI WCCGGW 2 cut(s) 495, 649
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 440, 470
Bse118I RCCGGY 5 cut(s) 323, 443, 608, 773, 1046
Bse1I ACTGG 2 cut(s) 1126, 1135
Bse21I CCTNAGG 1 cut(s) 1191
BseAI TCCGGA 2 cut(s) 495, 649
BseBI CCWGG 6 cut(s) 452, 671, 846, 1094, 1110, 1242
BseGI GGATG 5 cut(s) 63, 222, 822, 828, 916
BseMII CTCAG 2 cut(s) 1176, 1182
BseNI ACTGG 2 cut(s) 1126, 1135
BsePI GCGCGC 1 cut(s) 657
BseRI GAGGAG 2 cut(s) 128, 593
BseX3I CGGCCG 1 cut(s) 412
BseXI GCAGC 2 cut(s) 276, 531
BseYI CCCAGC 5 cut(s) 207, 237, 395, 429, 988
Bsh1236I CGCG 3 cut(s) 81, 228, 659
Bsh1285I CGRYCG 2 cut(s) 79, 415
BshNI GGYRCC 3 cut(s) 758, 770, 1043
BsiEI CGRYCG 2 cut(s) 79, 415
BsiHKAI GWGCWC 3 cut(s) 291, 1108, 1163
BsiHKCI CYCGRG 2 cut(s) 290, 1271
BslFI GGGAC 1 cut(s) 254
BsmAI GTCTC 2 cut(s) 493, 651
BsmBI CGTCTC 1 cut(s) 493
BsmFI GGGAC 1 cut(s) 254
BsmI GAATGC 1 cut(s) 805
BsoBI CYCGRG 2 cut(s) 290, 1271
Bsp1286I GDGCHC 5 cut(s) 291, 396, 458, 1108, 1163
Bsp13I TCCGGA 2 cut(s) 495, 649
Bsp1407I TGTACA 1 cut(s) 639
Bsp143I GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
Bsp19I CCATGG 1 cut(s) 805
Bsp68I TCGCGA 1 cut(s) 81
BspCNI CTCAG 2 cut(s) 1175, 1183
BspEI TCCGGA 2 cut(s) 495, 649
BspFNI CGCG 3 cut(s) 81, 228, 659
BspMAI CTGCAG 1 cut(s) 1027
BspOI GCTAGC 1 cut(s) 726
BspPI GGATC 2 cut(s) 188, 671
BspQI GCTCTTC 1 cut(s) 224
BspT107I GGYRCC 3 cut(s) 758, 770, 1043
BsrFI RCCGGY 5 cut(s) 323, 443, 608, 773, 1046
BsrGI TGTACA 1 cut(s) 639
BsrI ACTGG 2 cut(s) 1126, 1135
BssAI RCCGGY 5 cut(s) 323, 443, 608, 773, 1046
BssHII GCGCGC 1 cut(s) 657
BssMI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
BssNI GRCGYC 7 cut(s) 39, 87, 144, 165, 174, 369, 486
BssT1I CCWWGG 1 cut(s) 805
Bst2UI CCWGG 6 cut(s) 452, 671, 846, 1094, 1110, 1242
Bst4CI ACNGT 5 cut(s) 424, 564, 767, 1010, 1296
Bst6I CTCTTC 2 cut(s) 224, 275
BstACI GRCGYC 7 cut(s) 39, 87, 144, 165, 174, 369, 486
BstAUI TGTACA 1 cut(s) 639
BstBAI YACGTR 1 cut(s) 508
BstC8I GCNNGC 8 cut(s) 23, 215, 287, 435, 445, 549, 659, 724
BstDEI CTNAG 2 cut(s) 1162, 1191
BstDSI CCRYGG 3 cut(s) 226, 786, 805
BstENI CCTNNNNNAGG 1 cut(s) 1258
BstF5I GGATG 5 cut(s) 63, 222, 822, 828, 916
BstFNI CGCG 3 cut(s) 81, 228, 659
BstHHI GCGC 5 cut(s) 21, 213, 553, 659, 661
BstKTI GATC 7 cut(s) 79, 121, 189, 196, 408, 504, 679
BstMAI GTCTC 2 cut(s) 493, 651
BstMBI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
BstMCI CGRYCG 2 cut(s) 79, 415
BstMWI GCNNNNNNNGC 7 cut(s) 234, 264, 380, 453, 550, 557, 665
BstNI CCWGG 6 cut(s) 452, 671, 846, 1094, 1110, 1242
BstSFI CTRYAG 1 cut(s) 1023
BstUI CGCG 3 cut(s) 81, 228, 659
BstV1I GCAGC 2 cut(s) 276, 531
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 1 cut(s) 501
BstXI CCANNNNNNTGG 1 cut(s) 812
BstYI RGATCY 1 cut(s) 501
BstZI CGGCCG 1 cut(s) 412
Bsu36I CCTNAGG 1 cut(s) 1191
BsuI GTATCC 2 cut(s) 1197, 1293
BtgI CCRYGG 3 cut(s) 226, 786, 805
BtgZI GCGATG 1 cut(s) 741
BtrI CACGTC 1 cut(s) 364
BtsCI GGATG 5 cut(s) 63, 222, 822, 828, 916
BtsIMutI CAGTG 1 cut(s) 1119
BtuMI TCGCGA 1 cut(s) 81
Cac8I GCNNGC 8 cut(s) 23, 215, 287, 435, 445, 549, 659, 724
CfoI GCGC 5 cut(s) 21, 213, 553, 659, 661
Cfr10I RCCGGY 5 cut(s) 323, 443, 608, 773, 1046
Cfr42I CCGCGG 1 cut(s) 229
Cfr9I CCCGGG 1 cut(s) 1271
CseI GACGC 5 cut(s) 28, 95, 152, 182, 377
Csp6I GTAC 4 cut(s) 565, 640, 1128, 1245
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviAII CATG 2 cut(s) 418, 806
CviQI GTAC 4 cut(s) 565, 640, 1128, 1245
DdeI CTNAG 2 cut(s) 1162, 1191
DpnI GATC 7 cut(s) 78, 120, 188, 195, 407, 503, 678
DpnII GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
EaeI YGGCCR 3 cut(s) 412, 510, 895
EagI CGGCCG 1 cut(s) 412
Eam1104I CTCTTC 2 cut(s) 224, 275
EarI CTCTTC 2 cut(s) 224, 275
EciI GGCGGA 3 cut(s) 265, 551, 819
Ecl136II GAGCTC 3 cut(s) 289, 1106, 1161
EclXI CGGCCG 1 cut(s) 412
Eco130I CCWWGG 1 cut(s) 805
Eco147I AGGCCT 1 cut(s) 1092
Eco24I GRGCYC 5 cut(s) 291, 396, 458, 1108, 1163
Eco47I GGWCC 5 cut(s) 4, 783, 794, 929, 1199
Eco52I CGGCCG 1 cut(s) 412
Eco53kI GAGCTC 3 cut(s) 289, 1106, 1161
Eco81I CCTNAGG 1 cut(s) 1191
Eco88I CYCGRG 2 cut(s) 290, 1271
EcoICRI GAGCTC 3 cut(s) 289, 1106, 1161
EcoNI CCTNNNNNAGG 1 cut(s) 1258
EcoO109I RGGNCCY 2 cut(s) 256, 667
EcoRII CCWGG 6 cut(s) 450, 669, 844, 1092, 1108, 1240
EcoT14I CCWWGG 1 cut(s) 805
EcoT38I GRGCYC 5 cut(s) 291, 396, 458, 1108, 1163
ErhI CCWWGG 1 cut(s) 805
Esp3I CGTCTC 1 cut(s) 493
FaeI CATG 2 cut(s) 421, 809
FaqI GGGAC 1 cut(s) 254
FatI CATG 2 cut(s) 417, 805
FauI CCCGC 1 cut(s) 161
FblI GTMKAC 2 cut(s) 366, 483
FokI GGATG 5 cut(s) 50, 209, 829, 835, 903
FriOI GRGCYC 5 cut(s) 291, 396, 458, 1108, 1163
FspBI CTAG 3 cut(s) 590, 723, 1079
GlaI GCGC 5 cut(s) 20, 212, 552, 658, 660
GsaI CCCAGC 5 cut(s) 211, 241, 399, 433, 992
HgaI GACGC 5 cut(s) 28, 95, 152, 182, 377
HhaI GCGC 5 cut(s) 21, 213, 553, 659, 661
Hin1I GRCGYC 7 cut(s) 39, 87, 144, 165, 174, 369, 486
Hin1II CATG 2 cut(s) 421, 809
Hin6I GCGC 5 cut(s) 19, 211, 551, 657, 659
HinP1I GCGC 5 cut(s) 19, 211, 551, 657, 659
HincII GTYRAC 3 cut(s) 367, 475, 484
HindII GTYRAC 3 cut(s) 367, 475, 484
HinfI GANTC 2 cut(s) 108, 1225
HphI GGTGA 4 cut(s) 103, 343, 418, 1242
Hpy166II GTNNAC 8 cut(s) 367, 475, 484, 640, 794, 929, 1076, 1199
Hpy188I TCNGA 4 cut(s) 163, 182, 681, 1224
Hpy188III TCNNGA 6 cut(s) 80, 197, 311, 496, 650, 1190
Hpy8I GTNNAC 8 cut(s) 367, 475, 484, 640, 794, 929, 1076, 1199
HpyAV CCTTC 3 cut(s) 364, 658, 1185
HpyCH4III ACNGT 5 cut(s) 424, 564, 767, 1010, 1296
HpyCH4IV ACGT 5 cut(s) 132, 165, 363, 486, 507
HpyCH4V TGCA 3 cut(s) 618, 1025, 1292
HpyF10VI GCNNNNNNNGC 7 cut(s) 234, 264, 380, 453, 550, 557, 665
HpyF3I CTNAG 2 cut(s) 1162, 1191
HpySE526I ACGT 5 cut(s) 132, 165, 363, 486, 507
Hsp92I GRCGYC 7 cut(s) 39, 87, 144, 165, 174, 369, 486
Hsp92II CATG 2 cut(s) 421, 809
HspAI GCGC 5 cut(s) 19, 211, 551, 657, 659
Kpn2I TCCGGA 2 cut(s) 495, 649
KroI GCCGGC 1 cut(s) 443
KroNI GCCGGC 1 cut(s) 445
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
LguI GCTCTTC 1 cut(s) 224
LmnI GCTCC 6 cut(s) 391, 461, 498, 832, 1103, 1111
Lsp1109I GCAGC 2 cut(s) 276, 531
LweI GCATC 2 cut(s) 831, 922
MaeI CTAG 3 cut(s) 590, 723, 1079
MaeII ACGT 5 cut(s) 132, 165, 363, 486, 507
MaeIII GTNAC 2 cut(s) 349, 424
MalI GATC 7 cut(s) 78, 120, 188, 195, 407, 503, 678
MboI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
MboII GAAGA 6 cut(s) 95, 211, 262, 415, 511, 745
MflI RGATCY 1 cut(s) 501
MhlI GDGCHC 5 cut(s) 291, 396, 458, 1108, 1163
MlsI TGGCCA 2 cut(s) 512, 897
MluCI AATT 2 cut(s) 709, 1003
MluNI TGGCCA 2 cut(s) 512, 897
MmeI TCCRAC 1 cut(s) 186
Mox20I TGGCCA 2 cut(s) 512, 897
MroI TCCGGA 2 cut(s) 495, 649
MroNI GCCGGC 1 cut(s) 443
MscI TGGCCA 2 cut(s) 512, 897
MseI TTAA 1 cut(s) 684
MslI CAYNNNNRTG 1 cut(s) 810
Msp20I TGGCCA 2 cut(s) 512, 897
MspA1I CMGCKG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 6 cut(s) 452, 671, 846, 1094, 1110, 1242
MvnI CGCG 3 cut(s) 81, 228, 659
MwoI GCNNNNNNNGC 7 cut(s) 234, 264, 380, 453, 550, 557, 665
NaeI GCCGGC 1 cut(s) 445
NciI CCSGG 7 cut(s) 91, 864, 933, 963, 1017, 1272, 1273
NcoI CCATGG 1 cut(s) 805
NdeII GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
NgoMIV GCCGGC 1 cut(s) 443
NheI GCTAGC 1 cut(s) 722
NlaIII CATG 2 cut(s) 421, 809
NmeAIII GCCGAG 2 cut(s) 213, 1284
NmuCI GTSAC 2 cut(s) 349, 424
NruI TCGCGA 1 cut(s) 81
PaeR7I CTCGAG 1 cut(s) 290
PauI GCGCGC 1 cut(s) 657
PceI AGGCCT 1 cut(s) 1092
PciSI GCTCTTC 1 cut(s) 224
PcsI WCGNNNNNNNCGW 5 cut(s) 36, 138, 195, 288, 309
PctI GAATGC 1 cut(s) 805
PdiI GCCGGC 1 cut(s) 445
PfeI GAWTC 2 cut(s) 108, 1225
PflFI GACNNNGTC 1 cut(s) 176
Ple19I CGATCG 1 cut(s) 79
Ppu21I YACGTR 1 cut(s) 508
PsiI TTATAA 1 cut(s) 1002
Psp124BI GAGCTC 3 cut(s) 291, 1108, 1163
Psp6I CCWGG 6 cut(s) 450, 669, 844, 1092, 1108, 1240
PspFI CCCAGC 5 cut(s) 207, 237, 395, 429, 988
PspGI CCWGG 6 cut(s) 450, 669, 844, 1092, 1108, 1240
PspXI VCTCGAGB 1 cut(s) 290
PstI CTGCAG 1 cut(s) 1027
PsuI RGATCY 1 cut(s) 501
PsyI GACNNNGTC 1 cut(s) 176
PteI GCGCGC 1 cut(s) 657
PvuI CGATCG 1 cut(s) 79
RruI TCGCGA 1 cut(s) 81
RsaI GTAC 4 cut(s) 566, 641, 1129, 1246
RsaNI GTAC 4 cut(s) 565, 640, 1128, 1245
RseI CAYNNNNRTG 1 cut(s) 810
SacI GAGCTC 3 cut(s) 291, 1108, 1163
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 2 cut(s) 365, 482
SapI GCTCTTC 1 cut(s) 224
SaqAI TTAA 1 cut(s) 684
Sau3AI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
SduI GDGCHC 5 cut(s) 291, 396, 458, 1108, 1163
SfaNI GCATC 2 cut(s) 831, 922
SfcI CTRYAG 1 cut(s) 1023
Sfr274I CTCGAG 1 cut(s) 290
Sfr303I CCGCGG 1 cut(s) 229
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 2 cut(s) 365, 482
SinI GGWCC 5 cut(s) 4, 783, 794, 929, 1199
SlaI CTCGAG 1 cut(s) 290
SmaI CCCGGG 1 cut(s) 1273
SmiMI CAYNNNNRTG 1 cut(s) 810
SmlI CTYRAG 2 cut(s) 290, 386
SmoI CTYRAG 2 cut(s) 290, 386
Sse9I AATT 2 cut(s) 709, 1003
SseBI AGGCCT 1 cut(s) 1092
SspMI CTAG 3 cut(s) 590, 723, 1079
SstI GAGCTC 3 cut(s) 291, 1108, 1163
StuI AGGCCT 1 cut(s) 1092
StyI CCWWGG 1 cut(s) 805
TaaI ACNGT 5 cut(s) 424, 564, 767, 1010, 1296
TaiI ACGT 5 cut(s) 135, 168, 366, 489, 510
TaqII GACCGA 1 cut(s) 811
TasI AATT 2 cut(s) 709, 1003
TatI WGTACW 1 cut(s) 639
TfiI GAWTC 2 cut(s) 108, 1225
Tru1I TTAA 1 cut(s) 684
Tru9I TTAA 1 cut(s) 684
TscAI CASTG 1 cut(s) 1126
TseFI GTSAC 2 cut(s) 349, 424
TseI GCWGC 2 cut(s) 264, 544
Tsp45I GTSAC 2 cut(s) 349, 424
TspDTI ATGAA 1 cut(s) 211
TspGWI ACGGA 3 cut(s) 460, 775, 894
TspMI CCCGGG 1 cut(s) 1271
TspRI CASTG 1 cut(s) 1126
Tth111I GACNNNGTC 1 cut(s) 176
VpaK11BI GGWCC 5 cut(s) 4, 783, 794, 929, 1199
XagI CCTNNNNNAGG 1 cut(s) 1258
XhoI CTCGAG 1 cut(s) 290
XmaI CCCGGG 1 cut(s) 1271
XmiI GTMKAC 2 cut(s) 366, 483
XspI CTAG 3 cut(s) 590, 723, 1079
ZraI GACGTC 2 cut(s) 166, 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.