Rh5CG241600

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000611
Physical Location & Seq
Forward (+)
25109075 .. 25110379
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG241600.1

Sequence Viewer

Length: 1305 bp
ATGGACCCAACCAAGAAGCGCAAGCTCGACGAGAACGGCGTCGTTTTGGACACCGACCCCTCCGTCCCCAAGCTCGATCGCGAAGACGCCCGGAAAATCATCGAGCGATTCACCCCCGATCAGCTCATCGACGTCCTCCTCGACGCCATCTCCCGCCACTCCGACGTCCTCGACGCCGTCCGATTGATCGCCGATCCCGACACCGCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCACCACCGAGGGCCTCCGCAGCCTCTTCTCCGCCTACGGCGAGCTCGAGGAAGCCATCGTCATTCTCGACAAGAACACCGGCAAGAGCAAAGGCTACGGCTTCGTCACCTTCAAGCACGTCGACGCCGCCTACCTCGCCCTCAAGGAGCCCAGCAAGAAGATCGACGGCCGCATGACCGTCACCCAGCTCGCCGCCGCCGGCAACCAGGGCTCCACCACCGCCTCCGTCAACCCCGTCGACGTCTCGCTCCGGAAGATCTACGTGGCCAATGTGCCGTATGAGATGGCGGCGGATAAGCTGCTGGCGCATTTCGCACAGTACGGCGAGGTTGAGGAGGGGCCGCTAGGGTTTGATAAGCAGACCGGCAAGTGCAAAGGCTATGCTTTGTTTGTGTACAAGTCTCCGGAGGGTGCGCAGAAGGCCCTGGTTGATCCGATTAAGAACATTGAGGGGAGGCAGTTGAATTGTAAGTTTGCTAGCGATGGGAAGAAGCCCAAGATGGGTGGTGGCGGTGCCGACGGTGGTGCCGGTCAGGGGTCCGTGGGTGGACCGAATGCCCATGGAGATGGGATGGGGATGGCTCCGCCGTCTTCGATGCCTGGGCAGTATGGCGGGCCCGGTGGGTTTGGGTATGGGGGGTTTTCGGGTGGCCAACCTCCGTTGGGGCATCATCCTCTGGGTGGACCGGGGCTGTCATCTGTGGGAAATCAGGGGCCGGGGAGTGGTGGGTATGGTTCAGGGCTGGGTGGTGCTTATAATTACGGTGGGCCAGGTTCTACAGGATATGGTTTGGGTGGTGCTGGTGGGTTGGGTGGAGTTGGTGGTGGTGGACTAGGTAGTGGAGGGCTGGGTGGTGGAGCTCCTGGTAGCGGCACTGGTGGTACTGGGTCGTCTTTGTATGGATTGCCACCAAGCTCAGGTGGGTTGCCTTCTGGTAGGTATCCTGAGGGTGGACCTTATGGCCTGTCAGCATTTCAGAATCAACACCACCAGCCAGGTACATCACCCTTGCCAAGGGTTCCTCCCGGGGGAATGTATCCCAATGCACCGTATTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006954 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008219 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009692 GO:0009693 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010150 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010817 GO:0016070 GO:0016071 GO:0017091 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031329 GO:0031330 GO:0031974 GO:0031981 GO:0032496 GO:0032501 GO:0032502 GO:0032991 GO:0033993 GO:0034641 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043449 GO:0043450 GO:0043487 GO:0043488 GO:0043489 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048255 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070013 GO:0070935 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0090693 GO:0097159 GO:0099402 GO:1900673 GO:1900674 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1902369 GO:1902373 GO:1903311 GO:1903312
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

434

Amino Acids

44.09

Weight (kDa)

7.09

Isoelectric Point (pI)

29.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 73 - 139 7.8e-16 RNA recognition motif
RRM_1 PF00076 168 - 225 9.1e-10 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1002
AasI GACNNNNNNGTC 1 cut(s) 62
AatII GACGTC 3 cut(s) 135, 168, 489
Acc16I TGCGCA 1 cut(s) 660
AccB1I GGYRCC 2 cut(s) 758, 770
AccI GTMKAC 2 cut(s) 366, 483
AccII CGCG 2 cut(s) 81, 228
AccIII TCCGGA 2 cut(s) 495, 649
AclWI GGATC 2 cut(s) 188, 671
AcoI YGGCCR 3 cut(s) 412, 510, 895
AcyI GRCGYC 8 cut(s) 39, 87, 132, 144, 165, 174, 369, 486
AfaI GTAC 4 cut(s) 566, 641, 1129, 1246
AgsI TTSAA 2 cut(s) 358, 709
AjiI CACGTC 1 cut(s) 364
AjnI CCWGG 6 cut(s) 450, 669, 844, 1015, 1108, 1240
AluBI AGCT 9 cut(s) 25, 73, 124, 217, 289, 433, 544, 1106, 1161
AluI AGCT 9 cut(s) 25, 73, 124, 217, 289, 433, 544, 1106, 1161
Alw21I GWGCWC 2 cut(s) 291, 1108
Alw26I GTCTC 2 cut(s) 493, 651
AlwI GGATC 2 cut(s) 188, 671
Ama87I CYCGRG 2 cut(s) 290, 1271
Aor13HI TCCGGA 2 cut(s) 495, 649
ApaI GGGCCC 1 cut(s) 864
ApeKI GCWGC 2 cut(s) 264, 544
AspLEI GCGC 4 cut(s) 21, 213, 553, 661
AsuC2I CCSGG 6 cut(s) 91, 864, 933, 963, 1272, 1273
AsuHPI GGTGA 4 cut(s) 103, 343, 418, 1242
AsuNHI GCTAGC 1 cut(s) 722
AvaI CYCGRG 2 cut(s) 290, 1271
AvaII GGWCC 5 cut(s) 4, 783, 794, 929, 1199
AxyI CCTNAGG 1 cut(s) 1191
BaeGI GKGCMC 1 cut(s) 864
BalI TGGCCA 2 cut(s) 512, 897
BanI GGYRCC 2 cut(s) 758, 770
BanII GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
BbsI GAAGAC 2 cut(s) 90, 828
Bbv12I GWGCWC 2 cut(s) 291, 1108
BbvI GCAGC 2 cut(s) 276, 531
BccI CCATC 8 cut(s) 155, 308, 523, 722, 739, 806, 811, 817
BceAI ACGGC 8 cut(s) 52, 161, 298, 358, 427, 505, 583, 817
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 752, 786
BciT130I CCWGG 6 cut(s) 452, 671, 846, 1017, 1110, 1242
BciVI GTATCC 2 cut(s) 1197, 1293
BcnI CCSGG 6 cut(s) 91, 864, 933, 963, 1272, 1273
BcoDI GTCTC 2 cut(s) 493, 651
BfaI CTAG 3 cut(s) 590, 723, 1079
BfmI CTRYAG 1 cut(s) 1023
BfuI GTATCC 2 cut(s) 1197, 1293
BglII AGATCT 1 cut(s) 501
Bme18I GGWCC 5 cut(s) 4, 783, 794, 929, 1199
BmeT110I CYCGRG 2 cut(s) 290, 1271
BmgBI CACGTC 1 cut(s) 364
BmrI ACTGGG 1 cut(s) 1140
BmsI GCATC 2 cut(s) 831, 922
BmtI GCTAGC 1 cut(s) 726
BmuI ACTGGG 1 cut(s) 1140
BpiI GAAGAC 2 cut(s) 90, 828
Bpu10I CCTNAGC 1 cut(s) 1162
BpuEI CTTGAG 1 cut(s) 371
BpuMI CCSGG 6 cut(s) 91, 864, 933, 963, 1272, 1273
BsaAI YACGTR 1 cut(s) 508
BsaHI GRCGYC 8 cut(s) 39, 87, 132, 144, 165, 174, 369, 486
BsaWI WCCGGW 2 cut(s) 495, 649
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 440, 470
Bse118I RCCGGY 4 cut(s) 323, 443, 608, 773
Bse1I ACTGG 2 cut(s) 1126, 1135
Bse21I CCTNAGG 1 cut(s) 1191
BseAI TCCGGA 2 cut(s) 495, 649
BseBI CCWGG 6 cut(s) 452, 671, 846, 1017, 1110, 1242
BseGI GGATG 4 cut(s) 222, 822, 828, 916
BseMII CTCAG 2 cut(s) 1176, 1182
BseNI ACTGG 2 cut(s) 1126, 1135
BseRI GAGGAG 2 cut(s) 128, 593
BseSI GKGCMC 1 cut(s) 864
BseX3I CGGCCG 1 cut(s) 412
BseXI GCAGC 2 cut(s) 276, 531
BseYI CCCAGC 6 cut(s) 207, 237, 395, 429, 988, 1093
Bsh1236I CGCG 2 cut(s) 81, 228
Bsh1285I CGRYCG 2 cut(s) 79, 415
BshNI GGYRCC 2 cut(s) 758, 770
BsiEI CGRYCG 2 cut(s) 79, 415
BsiHKAI GWGCWC 2 cut(s) 291, 1108
BsiHKCI CYCGRG 2 cut(s) 290, 1271
BslFI GGGAC 2 cut(s) 50, 254
BsmAI GTCTC 2 cut(s) 493, 651
BsmBI CGTCTC 1 cut(s) 493
BsmFI GGGAC 2 cut(s) 50, 254
BsmI GAATGC 1 cut(s) 805
BsoBI CYCGRG 2 cut(s) 290, 1271
Bsp120I GGGCCC 1 cut(s) 860
Bsp1286I GDGCHC 5 cut(s) 291, 396, 458, 864, 1108
Bsp13I TCCGGA 2 cut(s) 495, 649
Bsp1407I TGTACA 1 cut(s) 639
Bsp143I GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
Bsp19I CCATGG 1 cut(s) 805
Bsp68I TCGCGA 1 cut(s) 81
BspCNI CTCAG 2 cut(s) 1175, 1183
BspEI TCCGGA 2 cut(s) 495, 649
BspFNI CGCG 2 cut(s) 81, 228
BspOI GCTAGC 1 cut(s) 726
BspPI GGATC 2 cut(s) 188, 671
BspQI GCTCTTC 1 cut(s) 224
BspT107I GGYRCC 2 cut(s) 758, 770
BsrFI RCCGGY 4 cut(s) 323, 443, 608, 773
BsrGI TGTACA 1 cut(s) 639
BsrI ACTGG 2 cut(s) 1126, 1135
BssAI RCCGGY 4 cut(s) 323, 443, 608, 773
BssMI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
BssNI GRCGYC 8 cut(s) 39, 87, 132, 144, 165, 174, 369, 486
BssT1I CCWWGG 2 cut(s) 805, 1259
Bst2UI CCWGG 6 cut(s) 452, 671, 846, 1017, 1110, 1242
Bst4CI ACNGT 5 cut(s) 424, 564, 767, 1010, 1296
Bst6I CTCTTC 2 cut(s) 224, 275
BstACI GRCGYC 8 cut(s) 39, 87, 132, 144, 165, 174, 369, 486
BstAUI TGTACA 1 cut(s) 639
BstBAI YACGTR 1 cut(s) 508
BstC8I GCNNGC 8 cut(s) 23, 215, 287, 435, 445, 549, 724, 860
BstDEI CTNAG 2 cut(s) 1162, 1191
BstDSI CCRYGG 3 cut(s) 226, 786, 805
BstENI CCTNNNNNAGG 1 cut(s) 1258
BstF5I GGATG 4 cut(s) 222, 822, 828, 916
BstFNI CGCG 2 cut(s) 81, 228
BstHHI GCGC 4 cut(s) 21, 213, 553, 661
BstKTI GATC 7 cut(s) 79, 121, 189, 196, 408, 504, 679
BstMAI GTCTC 2 cut(s) 493, 651
BstMBI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
BstMCI CGRYCG 2 cut(s) 79, 415
BstMWI GCNNNNNNNGC 7 cut(s) 234, 264, 380, 453, 550, 557, 665
BstNI CCWGG 6 cut(s) 452, 671, 846, 1017, 1110, 1242
BstSFI CTRYAG 1 cut(s) 1023
BstSLI GKGCMC 1 cut(s) 864
BstUI CGCG 2 cut(s) 81, 228
BstV1I GCAGC 2 cut(s) 276, 531
BstV2I GAAGAC 2 cut(s) 90, 828
BstX2I RGATCY 1 cut(s) 501
BstXI CCANNNNNNTGG 1 cut(s) 812
BstYI RGATCY 1 cut(s) 501
BstZI CGGCCG 1 cut(s) 412
Bsu36I CCTNAGG 1 cut(s) 1191
BsuI GTATCC 2 cut(s) 1197, 1293
BtgI CCRYGG 3 cut(s) 226, 786, 805
BtgZI GCGATG 1 cut(s) 741
BtrI CACGTC 1 cut(s) 364
BtsCI GGATG 4 cut(s) 222, 822, 828, 916
BtsIMutI CAGTG 1 cut(s) 1119
BtuMI TCGCGA 1 cut(s) 81
Cac8I GCNNGC 8 cut(s) 23, 215, 287, 435, 445, 549, 724, 860
CfoI GCGC 4 cut(s) 21, 213, 553, 661
Cfr10I RCCGGY 4 cut(s) 323, 443, 608, 773
Cfr42I CCGCGG 1 cut(s) 229
Cfr9I CCCGGG 1 cut(s) 1271
CseI GACGC 5 cut(s) 28, 95, 152, 182, 377
Csp6I GTAC 4 cut(s) 565, 640, 1128, 1245
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviAII CATG 2 cut(s) 418, 806
CviQI GTAC 4 cut(s) 565, 640, 1128, 1245
DdeI CTNAG 2 cut(s) 1162, 1191
DpnI GATC 7 cut(s) 78, 120, 188, 195, 407, 503, 678
DpnII GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
DrdI GACNNNNNNGTC 1 cut(s) 62
DseDI GACNNNNNNGTC 1 cut(s) 62
EaeI YGGCCR 3 cut(s) 412, 510, 895
EagI CGGCCG 1 cut(s) 412
Eam1104I CTCTTC 2 cut(s) 224, 275
EarI CTCTTC 2 cut(s) 224, 275
EciI GGCGGA 3 cut(s) 265, 551, 819
Ecl136II GAGCTC 2 cut(s) 289, 1106
EclXI CGGCCG 1 cut(s) 412
Eco130I CCWWGG 2 cut(s) 805, 1259
Eco24I GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
Eco47I GGWCC 5 cut(s) 4, 783, 794, 929, 1199
Eco52I CGGCCG 1 cut(s) 412
Eco53kI GAGCTC 2 cut(s) 289, 1106
Eco81I CCTNAGG 1 cut(s) 1191
Eco88I CYCGRG 2 cut(s) 290, 1271
EcoICRI GAGCTC 2 cut(s) 289, 1106
EcoNI CCTNNNNNAGG 1 cut(s) 1258
EcoO109I RGGNCCY 2 cut(s) 256, 667
EcoRII CCWGG 6 cut(s) 450, 669, 844, 1015, 1108, 1240
EcoT14I CCWWGG 2 cut(s) 805, 1259
EcoT38I GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
ErhI CCWWGG 2 cut(s) 805, 1259
Esp3I CGTCTC 1 cut(s) 493
FaeI CATG 2 cut(s) 421, 809
FaqI GGGAC 2 cut(s) 50, 254
FatI CATG 2 cut(s) 417, 805
FauI CCCGC 2 cut(s) 161, 851
FblI GTMKAC 2 cut(s) 366, 483
FokI GGATG 4 cut(s) 209, 829, 835, 903
FriOI GRGCYC 5 cut(s) 291, 396, 458, 864, 1108
FspBI CTAG 3 cut(s) 590, 723, 1079
FspI TGCGCA 1 cut(s) 660
GlaI GCGC 4 cut(s) 20, 212, 552, 660
GsaI CCCAGC 6 cut(s) 211, 241, 399, 433, 992, 1097
HgaI GACGC 5 cut(s) 28, 95, 152, 182, 377
HhaI GCGC 4 cut(s) 21, 213, 553, 661
Hin1I GRCGYC 8 cut(s) 39, 87, 132, 144, 165, 174, 369, 486
Hin1II CATG 2 cut(s) 421, 809
Hin6I GCGC 4 cut(s) 19, 211, 551, 659
HinP1I GCGC 4 cut(s) 19, 211, 551, 659
HincII GTYRAC 3 cut(s) 367, 475, 484
HindII GTYRAC 3 cut(s) 367, 475, 484
HinfI GANTC 2 cut(s) 108, 1225
HphI GGTGA 4 cut(s) 103, 343, 418, 1242
Hpy166II GTNNAC 8 cut(s) 367, 475, 484, 640, 794, 929, 1076, 1199
Hpy188I TCNGA 4 cut(s) 163, 182, 681, 1224
Hpy188III TCNNGA 6 cut(s) 80, 197, 311, 496, 650, 1190
Hpy8I GTNNAC 8 cut(s) 367, 475, 484, 640, 794, 929, 1076, 1199
HpyAV CCTTC 3 cut(s) 364, 658, 1185
HpyCH4III ACNGT 5 cut(s) 424, 564, 767, 1010, 1296
HpyCH4IV ACGT 5 cut(s) 132, 165, 363, 486, 507
HpyCH4V TGCA 2 cut(s) 618, 1292
HpyF10VI GCNNNNNNNGC 7 cut(s) 234, 264, 380, 453, 550, 557, 665
HpyF3I CTNAG 2 cut(s) 1162, 1191
HpySE526I ACGT 5 cut(s) 132, 165, 363, 486, 507
Hsp92I GRCGYC 8 cut(s) 39, 87, 132, 144, 165, 174, 369, 486
Hsp92II CATG 2 cut(s) 421, 809
HspAI GCGC 4 cut(s) 19, 211, 551, 659
Kpn2I TCCGGA 2 cut(s) 495, 649
KroI GCCGGC 1 cut(s) 443
KroNI GCCGGC 1 cut(s) 445
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
LguI GCTCTTC 1 cut(s) 224
LmnI GCTCC 6 cut(s) 391, 461, 498, 832, 1103, 1111
Lsp1109I GCAGC 2 cut(s) 276, 531
LweI GCATC 2 cut(s) 831, 922
MaeI CTAG 3 cut(s) 590, 723, 1079
MaeII ACGT 5 cut(s) 132, 165, 363, 486, 507
MaeIII GTNAC 2 cut(s) 349, 424
MalI GATC 7 cut(s) 78, 120, 188, 195, 407, 503, 678
MboI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
MboII GAAGA 7 cut(s) 95, 211, 262, 415, 511, 745, 828
MflI RGATCY 1 cut(s) 501
MhlI GDGCHC 5 cut(s) 291, 396, 458, 864, 1108
MlsI TGGCCA 2 cut(s) 512, 897
MluCI AATT 2 cut(s) 709, 1003
MluNI TGGCCA 2 cut(s) 512, 897
MmeI TCCRAC 1 cut(s) 186
Mox20I TGGCCA 2 cut(s) 512, 897
MroI TCCGGA 2 cut(s) 495, 649
MroNI GCCGGC 1 cut(s) 443
MscI TGGCCA 2 cut(s) 512, 897
MseI TTAA 1 cut(s) 684
MslI CAYNNNNRTG 1 cut(s) 810
Msp20I TGGCCA 2 cut(s) 512, 897
MspA1I CMGCKG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 6 cut(s) 452, 671, 846, 1017, 1110, 1242
MvnI CGCG 2 cut(s) 81, 228
MwoI GCNNNNNNNGC 7 cut(s) 234, 264, 380, 453, 550, 557, 665
NaeI GCCGGC 1 cut(s) 445
NciI CCSGG 6 cut(s) 91, 864, 933, 963, 1272, 1273
NcoI CCATGG 1 cut(s) 805
NdeII GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
NgoMIV GCCGGC 1 cut(s) 443
NheI GCTAGC 1 cut(s) 722
NlaIII CATG 2 cut(s) 421, 809
NmeAIII GCCGAG 1 cut(s) 213
NmuCI GTSAC 2 cut(s) 349, 424
NruI TCGCGA 1 cut(s) 81
NsbI TGCGCA 1 cut(s) 660
PaeR7I CTCGAG 1 cut(s) 290
PciSI GCTCTTC 1 cut(s) 224
PcsI WCGNNNNNNNCGW 5 cut(s) 36, 138, 195, 288, 309
PctI GAATGC 1 cut(s) 805
PdiI GCCGGC 1 cut(s) 445
PfeI GAWTC 2 cut(s) 108, 1225
PflFI GACNNNGTC 1 cut(s) 176
Ple19I CGATCG 1 cut(s) 79
Ppu21I YACGTR 1 cut(s) 508
PsiI TTATAA 1 cut(s) 1002
Psp124BI GAGCTC 2 cut(s) 291, 1108
Psp6I CCWGG 6 cut(s) 450, 669, 844, 1015, 1108, 1240
PspFI CCCAGC 6 cut(s) 207, 237, 395, 429, 988, 1093
PspGI CCWGG 6 cut(s) 450, 669, 844, 1015, 1108, 1240
PspOMI GGGCCC 1 cut(s) 860
PspXI VCTCGAGB 1 cut(s) 290
PsuI RGATCY 1 cut(s) 501
PsyI GACNNNGTC 1 cut(s) 176
PvuI CGATCG 1 cut(s) 79
RruI TCGCGA 1 cut(s) 81
RsaI GTAC 4 cut(s) 566, 641, 1129, 1246
RsaNI GTAC 4 cut(s) 565, 640, 1128, 1245
RseI CAYNNNNRTG 1 cut(s) 810
SacI GAGCTC 2 cut(s) 291, 1108
SacII CCGCGG 1 cut(s) 229
SalI GTCGAC 2 cut(s) 365, 482
SapI GCTCTTC 1 cut(s) 224
SaqAI TTAA 1 cut(s) 684
Sau3AI GATC 7 cut(s) 76, 118, 186, 193, 405, 501, 676
SduI GDGCHC 5 cut(s) 291, 396, 458, 864, 1108
SfaNI GCATC 2 cut(s) 831, 922
SfcI CTRYAG 1 cut(s) 1023
Sfr274I CTCGAG 1 cut(s) 290
Sfr303I CCGCGG 1 cut(s) 229
SgrBI CCGCGG 1 cut(s) 229
SgrDI CGTCGACG 2 cut(s) 365, 482
SinI GGWCC 5 cut(s) 4, 783, 794, 929, 1199
SlaI CTCGAG 1 cut(s) 290
SmaI CCCGGG 1 cut(s) 1273
SmiMI CAYNNNNRTG 1 cut(s) 810
SmlI CTYRAG 2 cut(s) 290, 386
SmoI CTYRAG 2 cut(s) 290, 386
Sse9I AATT 2 cut(s) 709, 1003
SspMI CTAG 3 cut(s) 590, 723, 1079
SstI GAGCTC 2 cut(s) 291, 1108
StyI CCWWGG 2 cut(s) 805, 1259
TaaI ACNGT 5 cut(s) 424, 564, 767, 1010, 1296
TaiI ACGT 5 cut(s) 135, 168, 366, 489, 510
TaqII GACCGA 1 cut(s) 811
TasI AATT 2 cut(s) 709, 1003
TatI WGTACW 1 cut(s) 639
TauI GCSGC 8 cut(s) 231, 374, 417, 440, 443, 536, 589, 1119
TfiI GAWTC 2 cut(s) 108, 1225
Tru1I TTAA 1 cut(s) 684
Tru9I TTAA 1 cut(s) 684
TscAI CASTG 1 cut(s) 1126
TseFI GTSAC 2 cut(s) 349, 424
TseI GCWGC 2 cut(s) 264, 544
Tsp45I GTSAC 2 cut(s) 349, 424
TspDTI ATGAA 1 cut(s) 211
TspGWI ACGGA 4 cut(s) 52, 460, 775, 894
TspMI CCCGGG 1 cut(s) 1271
TspRI CASTG 1 cut(s) 1126
Tth111I GACNNNGTC 1 cut(s) 176
VpaK11BI GGWCC 5 cut(s) 4, 783, 794, 929, 1199
XagI CCTNNNNNAGG 1 cut(s) 1258
XhoI CTCGAG 1 cut(s) 290
XmaI CCCGGG 1 cut(s) 1271
XmiI GTMKAC 2 cut(s) 366, 483
XspI CTAG 3 cut(s) 590, 723, 1079
ZraI GACGTC 3 cut(s) 133, 166, 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.