Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000611

Physical Location & Seq

Genomic Coordinates Forward (+)

15435902 .. 15439356

Gene Structure 3455 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0180200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGCTCTCCCTTCAGAGAGCGTTTCTAGGGTTTCTGGCCGTGGTGTCTCATGGCGGCGCTGCAAACTCGGCTAGTAAGGGCGGGTTTCCCTTACCTTCTGATTCCTTTGAAGACGGCGGCGAGGGAGCGATTCCTCGATGTCTATTCCTGACTCCTGCAAGGGAGATTTCTCGACTGCGATTGACTTCTGTTGGTGGTAGTCTTGTACCTTGGAAGGGAGGTAGCGCTCTCCTTCCTTCTCCCCTTTTCTGTGGTGGTGACAACGACGGCGGTATAGGTGGTATTGCCGGTGACTCTACACTGGGTATGTGTTCTGGAAGTACGATCGGTGGTGGAGAGAGCGCTTCCTTAGATCTGGATTGTTGGGATTCGGGGAGGGCTGCCGGTGGTGTGGACTTATACTACGATGGTTTGGCTTGGGACCGGGTTGCAGGCTGGATGAAGTTTTCGAAAGCGGGCATCGGTATCAGGGCCTTTATGCATGGCGATGGTGATCTCTGGCTGGGCTGGGATCGGTCGATTTCTATGGAGGATAAAGGGATCGGTGGTGACCCCGAGCTTATTTTGGCGACAGAGGTTGATGTCAGGCTAGAAGAGCTTGGTGGTGGAGCTCGCTCTCATCTGCCGGAGTTGGATAAATTTCGGTCCTCGATGCTGGTTGGTATGGGTGGCCGTCTCCAGGAGGGTGTCATCACTAGTGGTGACGGTGCAGGCAGAGTATTCCGGCGAATGGTGCATGGCGGCGGCGGCACGACTGCCGTCTCATCTAGGGTTTGGCCCAGGACCGAACTCTGTAGGTTCAGTGGGGCGAAGATCTACCCTGGCAGAGGCATCAGATTTATTCGGTCTGATTCTCAGGTGTTCCTCTTTGCCAATTCAAAATGCAAGAGGTACTTCCACAATCGGTTGAAGCCATCTAAGATTACCTGGACAGCCATGTACAGGAAGCAACACAAGAAGGATATTGCTCAAGAATCTGTTAAGAAGAGGAGACGTGCCAATAAGAAGCCTTATTCAAGGTCAATAGTTGGTGCCACCCTGGAGGTTATCCAGAAGAGGAGGACCGAAAAGCCTGAAGTTCGTGATGCTGCTCGTGAGGCCGCACTCCGTGAAATCAAGGAAAGGATCAAGAAAACCAAGGATGAAAAGAAAGCGAAGAAGGCAGAAGTTGTTGCCAAACAGAAGAGCAAGGGTCAGAATATTTCCAAGGGAGCTGTCCCCAAGGGTCCCAAGCTTGGCGGTGGCGGCGGCAAGCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_DNA-binding RRM_1

Protein Analysis

419

Amino Acids

45.01

Weight (kDa)

9.99

Isoelectric Point (pI)

48.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribosomal_L24e	PF01246	261 - 324	8.3e-28	Ribosomal protein L24e

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000611)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15010 AT3G15010
fragaria_vesca	FvH4_3g07890 FvH4_3g18630 FvH4_6g22550 FvH4_6g22550 FvH4_6g22550 FvH4_6g22550
malus_domestica	MD03G1240500.v1.1 MD10G1280800.v1.1 MD11G1259900.v1.1 MD12G1058300.v1.1
prunus_persica	Prupe.4G060300_v2.0.a1 Prupe.4G170100_v2.0.a1 Prupe.7G075100_v2.0.a1 Prupe.7G075100_v2.0.a1 Prupe.7G075100_v2.0.a1 Prupe.7G075100_v2.0.a1 Prupe.7G075100_v2.0.a1 Prupe.7G075100_v2.0.a1
pyrus_communis	pycom12g05260
rosa_chinensis	RchiOBHm_Chr1g0364191 RchiOBHm_Chr3g0480051 RchiOBHm_Chr5g0010701 RchiOBHm_Chr5g0031451
rosa_laevigata	RLG00000023519 RLG00000031772 RLG00000033308
rosa_multiflora	Rmu_co8296297.1_g000001 Rmu_sc0003684.1_g000004 Rmu_sc0006604.1_g000017 Rmu_sc0008864.1_g000013 Rmu_sc0013975.1_g000001 Rmu_sc0021762.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005170 Rroxscaffold_1G00065690 Rroxscaffold_6G00401800
rosa_rugosa	Rorug03G0180200 Rorug03G0180300 Rorug03G0180400 Rorug03G0180500 Rorug04G0451600 Rorug04G0451700 Rorug05G0125900
rosa_samantha	Rh1AG051900 Rh1AG321800 Rh1CG005400 Rh1CG301300 Rh1DG000800 Rh3AG231300 Rh3BG263700 Rh3CG261200 Rh3DG257100 Rh3DG316100 Rh4AG036900 Rh4AG037000 Rh4BG212900 Rh4BG213000 Rh4CG196500 Rh4DG300800 Rh4DG300900 Rh4DG301000 Rh5AG083400 Rh5AG218600 Rh5BG078600 Rh5BG218000 Rh5CG091400 Rh5CG241600 Rh5DG078800 Rh5DG223200 Rh7BG406600 Rh7DG422300
rosa_wichuraiana	Rw0G000640 Rw0G022340 Rw1G003330 Rw3G020470 Rw3G020800 Rw5G019360 Rw5G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1031
AclWI	GGATC	3 cut(s)	519, 548, 1133
AcoI	YGGCCR	2 cut(s)	36, 670
AcsI	RAATTY	1 cut(s)	638
AcuI	CTGAAG	1 cut(s)	1095
AdeI	CACNNNGTG	1 cut(s)	1109
AfaI	GTAC	4 cut(s)	207, 322, 893, 941
AfeI	AGCGCT	3 cut(s)	226, 343, 1256
AfiI	CCNNNNNNNGG	6 cut(s)	215, 679, 730, 827, 942, 1235
AgsI	TTSAA	4 cut(s)	110, 879, 910, 1017
AhlI	ACTAGT	1 cut(s)	695
AjiI	CACGTC	1 cut(s)	995
AjnI	CCWGG	5 cut(s)	678, 779, 820, 926, 1038
AluBI	AGCT	5 cut(s)	559, 598, 611, 1214, 1234
AluI	AGCT	5 cut(s)	559, 598, 611, 1214, 1234
Alw21I	GWGCWC	1 cut(s)	613
Alw26I	GTCTC	4 cut(s)	51, 680, 766, 985
AlwI	GGATC	3 cut(s)	519, 548, 1133
Ama87I	CYCGRG	1 cut(s)	554
Aor51HI	AGCGCT	3 cut(s)	226, 343, 1256
AoxI	GGCC	5 cut(s)	36, 471, 670, 776, 1098
ApeKI	GCWGC	3 cut(s)	59, 380, 1088
ApoI	RAATTY	1 cut(s)	638
AspLEI	GCGC	4 cut(s)	59, 227, 344, 1257
AspS9I	GGNCC	7 cut(s)	421, 471, 645, 777, 783, 1062, 1226
AsuC2I	CCSGG	1 cut(s)	425
AsuHPI	GGTGA	5 cut(s)	269, 302, 503, 560, 713
AsuII	TTCGAA	1 cut(s)	449
AvaI	CYCGRG	1 cut(s)	554
AvaII	GGWCC	5 cut(s)	421, 645, 783, 1062, 1226
BanI	GGYRCC	1 cut(s)	1031
BanII	GRGCYC	1 cut(s)	613
BauI	CACGAG	1 cut(s)	1092
BbsI	GAAGAC	1 cut(s)	117
Bbv12I	GWGCWC	1 cut(s)	613
BbvI	GCAGC	3 cut(s)	46, 367, 1075
BccI	CCATC	3 cut(s)	401, 482, 922
BceAI	ACGGC	5 cut(s)	23, 130, 283, 657, 743
BciT130I	CCWGG	5 cut(s)	680, 781, 822, 928, 1040
BcnI	CCSGG	1 cut(s)	425
BcoDI	GTCTC	4 cut(s)	51, 680, 766, 985
BcuI	ACTAGT	1 cut(s)	695
BfaI	CTAG	5 cut(s)	26, 72, 590, 696, 768
BfmI	CTRYAG	1 cut(s)	793
BfoI	RGCGCY	4 cut(s)	60, 228, 345, 1258
BglII	AGATCT	2 cut(s)	352, 813
Bme1390I	CCNGG	6 cut(s)	425, 680, 781, 822, 928, 1040
Bme18I	GGWCC	5 cut(s)	421, 645, 783, 1062, 1226
BmeT110I	CYCGRG	1 cut(s)	554
BmgBI	CACGTC	1 cut(s)	995
BmgT120I	GGNCC	7 cut(s)	421, 471, 645, 777, 783, 1062, 1226
BmiI	GGNNCC	4 cut(s)	422, 1033, 1227, 1228
BmrFI	CCNGG	6 cut(s)	425, 680, 781, 822, 928, 1040
BmrI	ACTGGG	1 cut(s)	311
BmsI	GCATC	4 cut(s)	468, 642, 840, 1075
BmuI	ACTGGG	1 cut(s)	311
BoxI	GACNNNNGTC	1 cut(s)	758
BpiI	GAAGAC	1 cut(s)	117
BpmI	CTGGAG	2 cut(s)	662, 1061
Bpu14I	TTCGAA	1 cut(s)	449
BpuEI	CTTGAG	1 cut(s)	954
BpuMI	CCSGG	1 cut(s)	425
BsaBI	GATNNNNATC	1 cut(s)	492
BsaJI	CCNNGG	8 cut(s)	39, 209, 779, 820, 1038, 1137, 1206, 1221
Bsc4I	CCNNNNNNNGG	6 cut(s)	215, 679, 730, 827, 942, 1235
Bse118I	RCCGGY	2 cut(s)	287, 383
Bse1I	ACTGG	1 cut(s)	306
Bse8I	GATNNNNATC	1 cut(s)	492
BseBI	CCWGG	5 cut(s)	680, 781, 822, 928, 1040
BseDI	CCNNGG	8 cut(s)	39, 209, 779, 820, 1038, 1137, 1206, 1221
BseGI	GGATG	2 cut(s)	444, 1147
BseJI	GATNNNNATC	1 cut(s)	492
BseLI	CCNNNNNNNGG	6 cut(s)	215, 679, 730, 827, 942, 1235
BseMII	CTCAG	1 cut(s)	869
BseNI	ACTGG	1 cut(s)	306
BseRI	GAGGAG	2 cut(s)	1003, 1072
BseXI	GCAGC	3 cut(s)	46, 367, 1075
BseYI	CCCAGC	2 cut(s)	502, 507
BsgI	GTGCAG	1 cut(s)	729
Bsh1285I	CGRYCG	2 cut(s)	327, 518
BshFI	GGCC	5 cut(s)	38, 473, 672, 778, 1100
BshNI	GGYRCC	1 cut(s)	1031
BsiEI	CGRYCG	2 cut(s)	327, 518
BsiHKAI	GWGCWC	1 cut(s)	613
BsiHKCI	CYCGRG	1 cut(s)	554
BsiSI	CCGG	5 cut(s)	288, 384, 424, 626, 724
BslFI	GGGAC	3 cut(s)	434, 1202, 1212
BslI	CCNNNNNNNGG	6 cut(s)	215, 679, 730, 827, 942, 1235
BsmAI	GTCTC	4 cut(s)	51, 680, 766, 985
BsmBI	CGTCTC	3 cut(s)	680, 766, 985
BsmFI	GGGAC	3 cut(s)	434, 1202, 1212
BsnI	GGCC	5 cut(s)	38, 473, 672, 778, 1100
BsoBI	CYCGRG	1 cut(s)	554
Bsp119I	TTCGAA	1 cut(s)	449
Bsp1286I	GDGCHC	1 cut(s)	613
Bsp1407I	TGTACA	1 cut(s)	939
Bsp143I	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
BspANI	GGCC	5 cut(s)	38, 473, 672, 778, 1100
BspCNI	CTCAG	1 cut(s)	868
BspLI	GGNNCC	4 cut(s)	422, 1033, 1227, 1228
BspPI	GGATC	3 cut(s)	519, 548, 1133
BspQI	GCTCTTC	2 cut(s)	588, 1178
BspT104I	TTCGAA	1 cut(s)	449
BspT107I	GGYRCC	1 cut(s)	1031
BsrFI	RCCGGY	2 cut(s)	287, 383
BsrGI	TGTACA	1 cut(s)	939
BsrI	ACTGG	1 cut(s)	306
BssAI	RCCGGY	2 cut(s)	287, 383
BssECI	CCNNGG	8 cut(s)	39, 209, 779, 820, 1038, 1137, 1206, 1221
BssMI	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
BssSI	CACGAG	1 cut(s)	1092
BssT1I	CCWWGG	4 cut(s)	209, 1137, 1206, 1221
Bst2BI	CACGAG	1 cut(s)	1092
Bst2UI	CCWGG	5 cut(s)	680, 781, 822, 928, 1040
Bst4CI	ACNGT	1 cut(s)	707
Bst6I	CTCTTC	4 cut(s)	588, 980, 1049, 1178
BstAUI	TGTACA	1 cut(s)	939
BstBI	TTCGAA	1 cut(s)	449
BstC8I	GCNNGC	5 cut(s)	433, 457, 613, 712, 1253
BstDEI	CTNAG	3 cut(s)	349, 855, 918
BstDSI	CCRYGG	1 cut(s)	39
BstEII	GGTNACC	1 cut(s)	548
BstENI	CCTNNNNNAGG	1 cut(s)	825
BstF5I	GGATG	2 cut(s)	444, 1147
BstH2I	RGCGCY	4 cut(s)	60, 228, 345, 1258
BstHHI	GCGC	4 cut(s)	59, 227, 344, 1257
BstKTI	GATC	7 cut(s)	327, 355, 496, 514, 543, 816, 1128
BstMAI	GTCTC	4 cut(s)	51, 680, 766, 985
BstMBI	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
BstMCI	CGRYCG	2 cut(s)	327, 518
BstMWI	GCNNNNNNNGC	8 cut(s)	68, 595, 733, 747, 1097, 1160, 1245, 1254
BstNI	CCWGG	5 cut(s)	680, 781, 822, 928, 1040
BstPAI	GACNNNNGTC	1 cut(s)	758
BstPI	GGTNACC	1 cut(s)	548
BstSCI	CCNGG	6 cut(s)	423, 678, 779, 820, 926, 1038
BstSFI	CTRYAG	1 cut(s)	793
BstV1I	GCAGC	3 cut(s)	46, 367, 1075
BstV2I	GAAGAC	1 cut(s)	117
BstX2I	RGATCY	2 cut(s)	352, 813
BstYI	RGATCY	2 cut(s)	352, 813
BsuRI	GGCC	5 cut(s)	38, 473, 672, 778, 1100
BtgI	CCRYGG	1 cut(s)	39
BtgZI	GCGATG	1 cut(s)	501
BtrI	CACGTC	1 cut(s)	995
BtsCI	GGATG	2 cut(s)	444, 1147
BtsIMutI	CAGTG	2 cut(s)	299, 808
Cac8I	GCNNGC	5 cut(s)	433, 457, 613, 712, 1253
CfoI	GCGC	4 cut(s)	59, 227, 344, 1257
Cfr10I	RCCGGY	2 cut(s)	287, 383
Cfr13I	GGNCC	7 cut(s)	421, 471, 645, 777, 783, 1062, 1226
Csp6I	GTAC	4 cut(s)	206, 321, 892, 940
CviAII	CATG	4 cut(s)	50, 482, 737, 937
CviQI	GTAC	4 cut(s)	206, 321, 892, 940
DdeI	CTNAG	3 cut(s)	349, 855, 918
DpnI	GATC	7 cut(s)	326, 354, 495, 513, 542, 815, 1127
DpnII	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
DraIII	CACNNNGTG	1 cut(s)	1109
EaeI	YGGCCR	2 cut(s)	36, 670
Eam1104I	CTCTTC	4 cut(s)	588, 980, 1049, 1178
EarI	CTCTTC	4 cut(s)	588, 980, 1049, 1178
Ecl136II	GAGCTC	1 cut(s)	611
Eco130I	CCWWGG	4 cut(s)	209, 1137, 1206, 1221
Eco24I	GRGCYC	1 cut(s)	613
Eco47I	GGWCC	5 cut(s)	421, 645, 783, 1062, 1226
Eco47III	AGCGCT	3 cut(s)	226, 343, 1256
Eco53kI	GAGCTC	1 cut(s)	611
Eco57I	CTGAAG	1 cut(s)	1095
Eco88I	CYCGRG	1 cut(s)	554
Eco91I	GGTNACC	1 cut(s)	548
EcoICRI	GAGCTC	1 cut(s)	611
EcoNI	CCTNNNNNAGG	1 cut(s)	825
EcoO109I	RGGNCCY	2 cut(s)	471, 1226
EcoO65I	GGTNACC	1 cut(s)	548
EcoRII	CCWGG	5 cut(s)	678, 779, 820, 926, 1038
EcoT14I	CCWWGG	4 cut(s)	209, 1137, 1206, 1221
EcoT22I	ATGCAT	1 cut(s)	483
EcoT38I	GRGCYC	1 cut(s)	613
ErhI	CCWWGG	4 cut(s)	209, 1137, 1206, 1221
Esp3I	CGTCTC	3 cut(s)	680, 766, 985
FaeI	CATG	4 cut(s)	53, 485, 740, 940
FalI	AAGNNNNNCTT	2 cut(s)	878, 910
FaqI	GGGAC	3 cut(s)	434, 1202, 1212
FatI	CATG	4 cut(s)	49, 481, 736, 936
FauI	CCCGC	2 cut(s)	74, 448
FokI	GGATG	2 cut(s)	451, 1154
FriOI	GRGCYC	1 cut(s)	613
FspBI	CTAG	5 cut(s)	26, 72, 590, 696, 768
GlaI	GCGC	4 cut(s)	58, 226, 343, 1256
GsaI	CCCAGC	2 cut(s)	506, 511
GsuI	CTGGAG	2 cut(s)	662, 1061
HaeII	RGCGCY	4 cut(s)	60, 228, 345, 1258
HaeIII	GGCC	5 cut(s)	38, 473, 672, 778, 1100
HapII	CCGG	5 cut(s)	288, 384, 424, 626, 724
HhaI	GCGC	4 cut(s)	59, 227, 344, 1257
Hin1II	CATG	4 cut(s)	53, 485, 740, 940
Hin6I	GCGC	4 cut(s)	57, 225, 342, 1255
HinP1I	GCGC	4 cut(s)	57, 225, 342, 1255
HindIII	AAGCTT	1 cut(s)	1232
HinfI	GANTC	7 cut(s)	101, 130, 151, 293, 368, 851, 974
HpaII	CCGG	5 cut(s)	288, 384, 424, 626, 724
HphI	GGTGA	5 cut(s)	269, 302, 503, 560, 713
Hpy166II	GTNNAC	1 cut(s)	394
Hpy188I	TCNGA	5 cut(s)	15, 100, 836, 850, 1197
Hpy188III	TCNNGA	9 cut(s)	148, 171, 315, 356, 971, 1051, 1082, 1094, 1129
Hpy8I	GTNNAC	1 cut(s)	394
Hpy99I	CGWCG	1 cut(s)	269
HpyAV	CCTTC	7 cut(s)	20, 105, 208, 242, 246, 952, 1153
HpyCH4III	ACNGT	1 cut(s)	707
HpyCH4IV	ACGT	1 cut(s)	994
HpyCH4V	TGCA	7 cut(s)	62, 158, 431, 481, 710, 736, 885
HpyF10VI	GCNNNNNNNGC	8 cut(s)	68, 595, 733, 747, 1097, 1160, 1245, 1254
HpyF3I	CTNAG	3 cut(s)	349, 855, 918
HpySE526I	ACGT	1 cut(s)	994
Hsp92II	CATG	4 cut(s)	53, 485, 740, 940
HspAI	GCGC	4 cut(s)	57, 225, 342, 1255
KflI	GGGWCCC	1 cut(s)	1226
Kzo9I	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
LguI	GCTCTTC	2 cut(s)	588, 1178
LmnI	GCTCC	3 cut(s)	125, 608, 1211
Lsp1109I	GCAGC	3 cut(s)	46, 367, 1075
LweI	GCATC	4 cut(s)	468, 642, 840, 1075
MaeI	CTAG	5 cut(s)	26, 72, 590, 696, 768
MaeII	ACGT	1 cut(s)	994
MaeIII	GTNAC	4 cut(s)	257, 290, 548, 701
MalI	GATC	7 cut(s)	326, 354, 495, 513, 542, 815, 1127
MboI	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
MboII	GAAGA	7 cut(s)	122, 605, 823, 997, 1066, 1168, 1195
MflI	RGATCY	2 cut(s)	352, 813
MhlI	GDGCHC	1 cut(s)	613
MluCI	AATT	2 cut(s)	638, 874
MlyI	GAGTC	2 cut(s)	145, 287
MmeI	TCCRAC	1 cut(s)	612
Mph1103I	ATGCAT	1 cut(s)	483
MseI	TTAA	1 cut(s)	981
MslI	CAYNNNNRTG	1 cut(s)	486
MspI	CCGG	5 cut(s)	288, 384, 424, 626, 724
MspR9I	CCNGG	6 cut(s)	425, 680, 781, 822, 928, 1040
MvaI	CCWGG	5 cut(s)	680, 781, 822, 928, 1040
MwoI	GCNNNNNNNGC	8 cut(s)	68, 595, 733, 747, 1097, 1160, 1245, 1254
NciI	CCSGG	1 cut(s)	425
NdeII	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
NlaIII	CATG	4 cut(s)	53, 485, 740, 940
NlaIV	GGNNCC	4 cut(s)	422, 1033, 1227, 1228
NmeAIII	GCCGAG	1 cut(s)	47
NmuCI	GTSAC	4 cut(s)	257, 290, 548, 701
NsiI	ATGCAT	1 cut(s)	483
NspV	TTCGAA	1 cut(s)	449
PciSI	GCTCTTC	2 cut(s)	588, 1178
PfeI	GAWTC	5 cut(s)	101, 130, 368, 851, 974
PfoI	TCCNGGA	1 cut(s)	678
Ple19I	CGATCG	1 cut(s)	327
PleI	GAGTC	2 cut(s)	145, 287
PpsI	GAGTC	2 cut(s)	145, 287
PpuMI	RGGWCCY	1 cut(s)	1226
PshAI	GACNNNNGTC	1 cut(s)	758
Psp124BI	GAGCTC	1 cut(s)	613
Psp5II	RGGWCCY	1 cut(s)	1226
Psp6I	CCWGG	5 cut(s)	678, 779, 820, 926, 1038
PspEI	GGTNACC	1 cut(s)	548
PspFI	CCCAGC	2 cut(s)	502, 507
PspGI	CCWGG	5 cut(s)	678, 779, 820, 926, 1038
PspN4I	GGNNCC	4 cut(s)	422, 1033, 1227, 1228
PspPI	GGNCC	7 cut(s)	421, 471, 645, 777, 783, 1062, 1226
PspPPI	RGGWCCY	1 cut(s)	1226
PsuI	RGATCY	2 cut(s)	352, 813
PvuI	CGATCG	1 cut(s)	327
RsaI	GTAC	4 cut(s)	207, 322, 893, 941
RsaNI	GTAC	4 cut(s)	206, 321, 892, 940
RseI	CAYNNNNRTG	1 cut(s)	486
SacI	GAGCTC	1 cut(s)	613
SapI	GCTCTTC	2 cut(s)	588, 1178
SaqAI	TTAA	1 cut(s)	981
Sau3AI	GATC	7 cut(s)	324, 352, 493, 511, 540, 813, 1125
Sau96I	GGNCC	7 cut(s)	421, 471, 645, 777, 783, 1062, 1226
SchI	GAGTC	2 cut(s)	145, 287
ScrFI	CCNGG	6 cut(s)	425, 680, 781, 822, 928, 1040
SduI	GDGCHC	1 cut(s)	613
SfaNI	GCATC	4 cut(s)	468, 642, 840, 1075
SfcI	CTRYAG	1 cut(s)	793
SfuI	TTCGAA	1 cut(s)	449
SinI	GGWCC	5 cut(s)	421, 645, 783, 1062, 1226
SmiMI	CAYNNNNRTG	1 cut(s)	486
SmlI	CTYRAG	1 cut(s)	969
SmoI	CTYRAG	1 cut(s)	969
SpeI	ACTAGT	1 cut(s)	695
Sse9I	AATT	2 cut(s)	638, 874
SspI	AATATT	1 cut(s)	1201
SspMI	CTAG	5 cut(s)	26, 72, 590, 696, 768
SstI	GAGCTC	1 cut(s)	613
StyD4I	CCNGG	6 cut(s)	423, 678, 779, 820, 926, 1038
StyI	CCWWGG	4 cut(s)	209, 1137, 1206, 1221
TaaI	ACNGT	1 cut(s)	707
TaiI	ACGT	1 cut(s)	997
TaqI	TCGA	5 cut(s)	136, 172, 449, 518, 650
TaqII	GACCGA	5 cut(s)	504, 633, 800, 834, 1079
TasI	AATT	2 cut(s)	638, 874
TatI	WGTACW	1 cut(s)	939
TauI	GCSGC	8 cut(s)	57, 120, 744, 747, 750, 1103, 1248, 1251
TfiI	GAWTC	5 cut(s)	101, 130, 368, 851, 974
Tru1I	TTAA	1 cut(s)	981
Tru9I	TTAA	1 cut(s)	981
TscAI	CASTG	2 cut(s)	306, 808
TseFI	GTSAC	4 cut(s)	257, 290, 548, 701
TseI	GCWGC	3 cut(s)	59, 380, 1088
Tsp45I	GTSAC	4 cut(s)	257, 290, 548, 701
TspDTI	ATGAA	2 cut(s)	455, 1158
TspGWI	ACGGA	1 cut(s)	1097
TspRI	CASTG	2 cut(s)	306, 808
VpaK11BI	GGWCC	5 cut(s)	421, 645, 783, 1062, 1226
XagI	CCTNNNNNAGG	1 cut(s)	825
XapI	RAATTY	1 cut(s)	638
XspI	CTAG	5 cut(s)	26, 72, 590, 696, 768
Zsp2I	ATGCAT	1 cut(s)	483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.