Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Forward (+)

16981077 .. 16988398

Gene Structure 7322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1192100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGCATGCCATGGCATCAAGATTGGCACCAAGTCTCTTAGTAATCCTCTCCATTTTCATCACCTTGTCATCACCAACCTCATGCCATCCTCTAGACCCTCTAACACCATCCGAGTTCATCCATGTCAAAACCATAGTCCAAAAATCCTACCCTTCTCAAAACCTGAGCTTCCAATACGTAGGCCTAGATGAACCCGAAAAGTCCACCGTCCTCTCATGGCAATCAAAACCCACCAAAACCCCGCCACCTCTTCCTCGCCGTGCCTTGGTCGTTTTACGACTCAAAATGAAAACCCTAGAGCTCATAGTCGACATATCAACCCGTTCCATAGTTTCCAAAACTGAATTTGATAACAAACATGGATACCCCTTGCTTAACAATGAAGAACAATCTGTTGCGACTGAACTCCCGTTCAAATATAAACCCTTTATCCAGTCCATTAAAAAGAGAGGGCTTAATATGTCCGAAGTTGTGTGTAGTACTTTTTCAGTTGGGTGGTTTGGGGAGGCCAATACTAAAAGAACAATAAAGATTAATTGTTTTTACAAAAAAGATAGTGTAAACTTGTACGTTAGGCCAGTGGAGGGAATAACAGTCGCGGTTGATCTGGATGAGCTGAAGATCGTTGAATACATCGATAGGTTTGTTGCACCTGTGCCAAAAGCTGAGGGAACCGAGTACCGAGCGTCCAATCAGAAGCCTCCATTCGGTCCAAGGCTAAATGGTGCTCCAGTTATGTCTGGGGACAAAGGGTTCAAGCTCGACGGCAACACTGTCAGGTGGGCCAATTGGATCTTCCATCTCGGATTTGATGTTCGAACGGGTGTGATTATATCTCAAGCATCAATATATGATCTTGAAATGCACAAGTACATGAGGGTTTTGTACAGAGGCTTTGTATCCGAGTTCTTTGTCCCGTACATGGACCCCACAGAAGAATGGTACTACAAAACCTTCTTCGACTGTGGAGAATTTGGGTTTGGTCTATCCACAGTCTCACTCAAACCGTTGACTGACTGCCCAGCCAATGCCCAGTTCATGGACGCCTACTATGCTGCCCAGGACGGCACGCCGGTGAAGATATCGAATGCTTATTGCATCTTTGAGAGACATGCAGGCAACATCTTGTGGCGCCACACTGAAGTCACCATCCCAGATATAGTGATCACAGAGGTTAGGGCTGAGGTCACTCTGGTTGTGAGGACGGTTTCAACTATAGGCAACTATGACTACATAATTGATTGGGAGTTCAAGCCAAGTGGCTCCATCAAAATGGAGGTGGGGCTAACAGGTGTGCTAGAAATTGGAGCAGTTAATTACACCCACATAGACCAAATAGAGGAGGAAGTTTTTGGCACATTGGTGGCAGATAATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

460

Amino Acids

51.86

Weight (kDa)

6.05

Isoelectric Point (pI)

46.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	29 - 114	1.9e-15	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	125 - 219	3.5e-22	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	250 - 458	1.2e-66	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	25, 1131
AccB7I	CCANNNNNTGG	1 cut(s)	1039
AccI	GTMKAC	1 cut(s)	309
AccII	CGCG	1 cut(s)	599
AciI	CCGC	2 cut(s)	242, 599
AclWI	GGATC	1 cut(s)	800
AcsI	RAATTY	2 cut(s)	344, 971
AcuI	CTGAAG	2 cut(s)	638, 1161
AcyI	GRCGYC	2 cut(s)	1044, 1132
AfaI	GTAC	7 cut(s)	481, 569, 680, 872, 887, 920, 944
AfiI	CCNNNNNNNGG	6 cut(s)	265, 584, 707, 922, 1039, 1339
AgsI	TTSAA	6 cut(s)	415, 629, 757, 860, 1212, 1252
AjnI	CCWGG	1 cut(s)	1059
AjuI	GAANNNNNNNTTGG	6 cut(s)	779, 811, 963, 995, 1019, 1051
AleI	CACNNNNGTG	2 cut(s)	1073, 1361
AloI	GAACNNNNNNTCC	4 cut(s)	737, 769, 798, 830
AluBI	AGCT	5 cut(s)	168, 301, 616, 665, 760
AluI	AGCT	5 cut(s)	168, 301, 616, 665, 760
Alw21I	GWGCWC	2 cut(s)	303, 730
Alw26I	GTCTC	3 cut(s)	38, 1000, 1102
AlwI	GGATC	1 cut(s)	800
AoxI	GGCC	4 cut(s)	181, 507, 575, 783
ApeKI	GCWGC	1 cut(s)	1055
ApoI	RAATTY	2 cut(s)	344, 971
ArsI	GACNNNNNNTTYG	2 cut(s)	120, 152
AseI	ATTAAT	1 cut(s)	534
AspLEI	GCGC	1 cut(s)	1134
AspS9I	GGNCC	3 cut(s)	710, 783, 925
AsuHPI	GGTGA	4 cut(s)	52, 63, 1087, 1138
AsuII	TTCGAA	1 cut(s)	817
AvaII	GGWCC	2 cut(s)	710, 925
BanI	GGYRCC	2 cut(s)	25, 1131
BanII	GRGCYC	1 cut(s)	303
Bbv12I	GWGCWC	2 cut(s)	303, 730
BbvCI	CCTCAGC	2 cut(s)	666, 1182
BbvI	GCAGC	1 cut(s)	1042
BccI	CCATC	5 cut(s)	93, 115, 807, 1157, 1274
BceAI	ACGGC	3 cut(s)	243, 781, 1081
BciT130I	CCWGG	1 cut(s)	1061
BciVI	GTATCC	2 cut(s)	356, 910
BclI	TGATCA	1 cut(s)	1164
BcoDI	GTCTC	3 cut(s)	38, 1000, 1102
BfaI	CTAG	4 cut(s)	92, 185, 296, 1298
BfmI	CTRYAG	1 cut(s)	1215
BfoI	RGCGCY	1 cut(s)	1135
BfuI	GTATCC	2 cut(s)	356, 910
BisI	GCNGC	1 cut(s)	1056
BlsI	GCNGC	1 cut(s)	1057
BmcAI	AGTACT	1 cut(s)	481
Bme1390I	CCNGG	1 cut(s)	1061
Bme18I	GGWCC	2 cut(s)	710, 925
BmgT120I	GGNCC	3 cut(s)	710, 783, 925
BmiI	GGNNCC	5 cut(s)	27, 673, 927, 1133, 1264
BmrFI	CCNGG	1 cut(s)	1061
BmrI	ACTGGG	1 cut(s)	1027
BmsI	GCATC	3 cut(s)	23, 851, 1107
BmuI	ACTGGG	1 cut(s)	1027
BpmI	CTGGAG	1 cut(s)	714
Bpu10I	CCTNAGC	3 cut(s)	164, 666, 1182
Bpu14I	TTCGAA	1 cut(s)	817
BpuEI	CTTGAG	1 cut(s)	822
Bsa29I	ATCGAT	1 cut(s)	636
BsaAI	YACGTR	1 cut(s)	178
BsaHI	GRCGYC	2 cut(s)	1044, 1132
BsaJI	CCNNGG	4 cut(s)	9, 264, 713, 1059
Bsc4I	CCNNNNNNNGG	6 cut(s)	265, 584, 707, 922, 1039, 1339
Bse118I	RCCGGY	1 cut(s)	1072
Bse1I	ACTGG	4 cut(s)	433, 578, 731, 1033
BseBI	CCWGG	1 cut(s)	1061
BseCI	ATCGAT	1 cut(s)	636
BseDI	CCNNGG	4 cut(s)	9, 264, 713, 1059
BseGI	GGATG	5 cut(s)	85, 107, 117, 616, 1149
BseLI	CCNNNNNNNGG	6 cut(s)	265, 584, 707, 922, 1039, 1339
BseMII	CTCAG	3 cut(s)	155, 657, 1173
BseNI	ACTGG	4 cut(s)	433, 578, 731, 1033
BseRI	GAGGAG	1 cut(s)	1355
BseXI	GCAGC	1 cut(s)	1042
BseYI	CCCAGC	1 cut(s)	1021
Bsh1236I	CGCG	1 cut(s)	599
BshFI	GGCC	4 cut(s)	183, 509, 577, 785
BshNI	GGYRCC	2 cut(s)	25, 1131
BshVI	ATCGAT	1 cut(s)	636
BsiHKAI	GWGCWC	2 cut(s)	303, 730
BsiSI	CCGG	1 cut(s)	1073
BslFI	GGGAC	2 cut(s)	758, 899
BslI	CCNNNNNNNGG	6 cut(s)	265, 584, 707, 922, 1039, 1339
BsmAI	GTCTC	3 cut(s)	38, 1000, 1102
BsmFI	GGGAC	2 cut(s)	758, 899
BsmI	GAATGC	1 cut(s)	1093
BsnI	GGCC	4 cut(s)	183, 509, 577, 785
Bsp119I	TTCGAA	1 cut(s)	817
Bsp1286I	GDGCHC	2 cut(s)	303, 730
Bsp1407I	TGTACA	1 cut(s)	885
Bsp143I	GATC	5 cut(s)	604, 621, 792, 853, 1164
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	2 cut(s)	242, 599
BspANI	GGCC	4 cut(s)	183, 509, 577, 785
BspCNI	CTCAG	3 cut(s)	156, 658, 1174
BspDI	ATCGAT	1 cut(s)	636
BspFNI	CGCG	1 cut(s)	599
BspLI	GGNNCC	5 cut(s)	27, 673, 927, 1133, 1264
BspPI	GGATC	1 cut(s)	800
BspT104I	TTCGAA	1 cut(s)	817
BspT107I	GGYRCC	2 cut(s)	25, 1131
BsrFI	RCCGGY	1 cut(s)	1072
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	4 cut(s)	433, 578, 731, 1033
BssAI	RCCGGY	1 cut(s)	1072
BssECI	CCNNGG	4 cut(s)	9, 264, 713, 1059
BssMI	GATC	5 cut(s)	604, 621, 792, 853, 1164
BssNI	GRCGYC	2 cut(s)	1044, 1132
BssT1I	CCWWGG	3 cut(s)	9, 264, 713
Bst2UI	CCWGG	1 cut(s)	1061
Bst4CI	ACNGT	7 cut(s)	208, 595, 775, 965, 994, 1008, 1207
Bst6I	CTCTTC	1 cut(s)	255
BstACI	GRCGYC	2 cut(s)	1044, 1132
BstAUI	TGTACA	1 cut(s)	885
BstBAI	YACGTR	1 cut(s)	178
BstBI	TTCGAA	1 cut(s)	817
BstC8I	GCNNGC	3 cut(s)	6, 1070, 1117
BstDEI	CTNAG	4 cut(s)	37, 164, 666, 1182
BstDSI	CCRYGG	1 cut(s)	9
BstF5I	GGATG	5 cut(s)	85, 107, 117, 616, 1149
BstFNI	CGCG	1 cut(s)	599
BstH2I	RGCGCY	1 cut(s)	1135
BstHHI	GCGC	1 cut(s)	1134
BstKTI	GATC	5 cut(s)	607, 624, 795, 856, 1167
BstMAI	GTCTC	3 cut(s)	38, 1000, 1102
BstMBI	GATC	5 cut(s)	604, 621, 792, 853, 1164
BstMWI	GCNNNNNNNGC	1 cut(s)	1052
BstNI	CCWGG	1 cut(s)	1061
BstNSI	RCATGY	2 cut(s)	8, 1115
BstSCI	CCNGG	1 cut(s)	1059
BstSFI	CTRYAG	1 cut(s)	1215
BstSNI	TACGTA	1 cut(s)	178
BstUI	CGCG	1 cut(s)	599
BstV1I	GCAGC	1 cut(s)	1042
BstX2I	RGATCY	1 cut(s)	792
BstXI	CCANNNNNNTGG	1 cut(s)	1273
BstYI	RGATCY	1 cut(s)	792
Bsu15I	ATCGAT	1 cut(s)	636
BsuI	GTATCC	2 cut(s)	356, 910
BsuRI	GGCC	4 cut(s)	183, 509, 577, 785
BsuTUI	ATCGAT	1 cut(s)	636
BtgI	CCRYGG	1 cut(s)	9
BtsCI	GGATG	5 cut(s)	85, 107, 117, 616, 1149
BtsIMutI	CAGTG	3 cut(s)	585, 771, 1137
Cac8I	GCNNGC	3 cut(s)	6, 1070, 1117
CfoI	GCGC	1 cut(s)	1134
Cfr10I	RCCGGY	1 cut(s)	1072
Cfr13I	GGNCC	3 cut(s)	710, 783, 925
ClaI	ATCGAT	1 cut(s)	636
CseI	GACGC	2 cut(s)	675, 1052
Csp6I	GTAC	7 cut(s)	480, 568, 679, 871, 886, 919, 943
CspCI	CAANNNNNGTGG	2 cut(s)	1240, 1275
CviQI	GTAC	7 cut(s)	480, 568, 679, 871, 886, 919, 943
DdeI	CTNAG	4 cut(s)	37, 164, 666, 1182
DinI	GGCGCC	1 cut(s)	1133
DpnI	GATC	5 cut(s)	606, 623, 794, 855, 1166
DpnII	GATC	5 cut(s)	604, 621, 792, 853, 1164
Eam1104I	CTCTTC	1 cut(s)	255
EarI	CTCTTC	1 cut(s)	255
Ecl136II	GAGCTC	1 cut(s)	301
Eco105I	TACGTA	1 cut(s)	178
Eco130I	CCWWGG	3 cut(s)	9, 264, 713
Eco147I	AGGCCT	1 cut(s)	183
Eco24I	GRGCYC	1 cut(s)	303
Eco32I	GATATC	1 cut(s)	1083
Eco47I	GGWCC	2 cut(s)	710, 925
Eco53kI	GAGCTC	1 cut(s)	301
Eco57I	CTGAAG	2 cut(s)	638, 1161
EcoICRI	GAGCTC	1 cut(s)	301
EcoRII	CCWGG	1 cut(s)	1059
EcoRV	GATATC	1 cut(s)	1083
EcoT14I	CCWWGG	3 cut(s)	9, 264, 713
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	303
EgeI	GGCGCC	1 cut(s)	1133
EheI	GGCGCC	1 cut(s)	1133
ErhI	CCWWGG	3 cut(s)	9, 264, 713
FaqI	GGGAC	2 cut(s)	758, 899
FauI	CCCGC	1 cut(s)	249
FbaI	TGATCA	1 cut(s)	1164
FblI	GTMKAC	1 cut(s)	309
Fnu4HI	GCNGC	1 cut(s)	1056
FokI	GGATG	5 cut(s)	72, 94, 104, 623, 1136
FriOI	GRGCYC	1 cut(s)	303
Fsp4HI	GCNGC	1 cut(s)	1056
FspBI	CTAG	4 cut(s)	92, 185, 296, 1298
GlaI	GCGC	1 cut(s)	1133
GluI	GCNGC	1 cut(s)	1056
GsaI	CCCAGC	1 cut(s)	1025
GsuI	CTGGAG	1 cut(s)	714
HaeII	RGCGCY	1 cut(s)	1135
HaeIII	GGCC	4 cut(s)	183, 509, 577, 785
HapII	CCGG	1 cut(s)	1073
HgaI	GACGC	2 cut(s)	675, 1052
HhaI	GCGC	1 cut(s)	1134
Hin1I	GRCGYC	2 cut(s)	1044, 1132
Hin6I	GCGC	1 cut(s)	1132
HinP1I	GCGC	1 cut(s)	1132
HincII	GTYRAC	2 cut(s)	310, 1011
HindII	GTYRAC	2 cut(s)	310, 1011
HinfI	GANTC	1 cut(s)	279
HpaII	CCGG	1 cut(s)	1073
HphI	GGTGA	4 cut(s)	52, 63, 1087, 1138
Hpy166II	GTNNAC	4 cut(s)	204, 310, 562, 1011
Hpy188I	TCNGA	5 cut(s)	112, 466, 696, 806, 904
Hpy188III	TCNNGA	4 cut(s)	18, 92, 608, 857
Hpy8I	GTNNAC	4 cut(s)	204, 310, 562, 1011
Hpy99I	CGWCG	1 cut(s)	767
HpyAV	CCTTC	2 cut(s)	162, 964
HpyCH4III	ACNGT	7 cut(s)	208, 595, 775, 965, 994, 1008, 1207
HpyCH4IV	ACGT	2 cut(s)	177, 570
HpyCH4V	TGCA	5 cut(s)	4, 650, 865, 1098, 1115
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1052
HpyF3I	CTNAG	4 cut(s)	37, 164, 666, 1182
HpySE526I	ACGT	2 cut(s)	177, 570
Hsp92I	GRCGYC	2 cut(s)	1044, 1132
HspAI	GCGC	1 cut(s)	1132
KasI	GGCGCC	1 cut(s)	1131
Ksp22I	TGATCA	1 cut(s)	1164
Kzo9I	GATC	5 cut(s)	604, 621, 792, 853, 1164
LmnI	GCTCC	3 cut(s)	733, 1268, 1307
Lsp1109I	GCAGC	1 cut(s)	1042
LweI	GCATC	3 cut(s)	23, 851, 1107
MaeI	CTAG	4 cut(s)	92, 185, 296, 1298
MaeII	ACGT	2 cut(s)	177, 570
MaeIII	GTNAC	2 cut(s)	1144, 1186
MalI	GATC	5 cut(s)	606, 623, 794, 855, 1166
MboI	GATC	5 cut(s)	604, 621, 792, 853, 1164
MboII	GAAGA	7 cut(s)	242, 395, 631, 787, 947, 949, 1090
MfeI	CAATTG	1 cut(s)	787
MflI	RGATCY	1 cut(s)	792
MhlI	GDGCHC	2 cut(s)	303, 730
MluCI	AATT	8 cut(s)	344, 535, 787, 971, 1236, 1302, 1315, 1372
Mly113I	GGCGCC	1 cut(s)	1132
MlyI	GAGTC	1 cut(s)	273
Mph1103I	ATGCAT	1 cut(s)	6
MseI	TTAA	5 cut(s)	375, 441, 456, 534, 1314
MslI	CAYNNNNRTG	3 cut(s)	1073, 1271, 1361
MspI	CCGG	1 cut(s)	1073
MspR9I	CCNGG	1 cut(s)	1061
MunI	CAATTG	1 cut(s)	787
Mva1269I	GAATGC	1 cut(s)	1093
MvaI	CCWGG	1 cut(s)	1061
MvnI	CGCG	1 cut(s)	599
MwoI	GCNNNNNNNGC	1 cut(s)	1052
NarI	GGCGCC	1 cut(s)	1132
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	5 cut(s)	604, 621, 792, 853, 1164
NlaIV	GGNNCC	5 cut(s)	27, 673, 927, 1133, 1264
NmuCI	GTSAC	2 cut(s)	1144, 1186
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	8, 1115
NspV	TTCGAA	1 cut(s)	817
OliI	CACNNNNGTG	2 cut(s)	1073, 1361
PaeI	GCATGC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	183
PctI	GAATGC	1 cut(s)	1093
PflMI	CCANNNNNTGG	1 cut(s)	1039
PkrI	GCNGC	1 cut(s)	1057
PleI	GAGTC	1 cut(s)	273
PluTI	GGCGCC	1 cut(s)	1135
PpsI	GAGTC	1 cut(s)	273
Ppu21I	YACGTR	1 cut(s)	178
PshBI	ATTAAT	1 cut(s)	534
Psp124BI	GAGCTC	1 cut(s)	303
Psp6I	CCWGG	1 cut(s)	1059
PspFI	CCCAGC	1 cut(s)	1021
PspGI	CCWGG	1 cut(s)	1059
PspN4I	GGNNCC	5 cut(s)	27, 673, 927, 1133, 1264
PspPI	GGNCC	3 cut(s)	710, 783, 925
PsuI	RGATCY	1 cut(s)	792
RsaI	GTAC	7 cut(s)	481, 569, 680, 872, 887, 920, 944
RsaNI	GTAC	7 cut(s)	480, 568, 679, 871, 886, 919, 943
RseI	CAYNNNNRTG	3 cut(s)	1073, 1271, 1361
SacI	GAGCTC	1 cut(s)	303
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	5 cut(s)	375, 441, 456, 534, 1314
SatI	GCNGC	1 cut(s)	1056
Sau3AI	GATC	5 cut(s)	604, 621, 792, 853, 1164
Sau96I	GGNCC	3 cut(s)	710, 783, 925
ScaI	AGTACT	1 cut(s)	481
SchI	GAGTC	1 cut(s)	273
ScrFI	CCNGG	1 cut(s)	1061
SduI	GDGCHC	2 cut(s)	303, 730
SfaNI	GCATC	3 cut(s)	23, 851, 1107
SfcI	CTRYAG	1 cut(s)	1215
SfoI	GGCGCC	1 cut(s)	1133
SfuI	TTCGAA	1 cut(s)	817
SgrAI	CRCCGGYG	1 cut(s)	1072
SinI	GGWCC	2 cut(s)	710, 925
SmiMI	CAYNNNNRTG	3 cut(s)	1073, 1271, 1361
SmlI	CTYRAG	1 cut(s)	837
SmoI	CTYRAG	1 cut(s)	837
SnaBI	TACGTA	1 cut(s)	178
SphI	GCATGC	1 cut(s)	8
Sse9I	AATT	8 cut(s)	344, 535, 787, 971, 1236, 1302, 1315, 1372
SseBI	AGGCCT	1 cut(s)	183
SsiI	CCGC	2 cut(s)	242, 599
SspDI	GGCGCC	1 cut(s)	1131
SspMI	CTAG	4 cut(s)	92, 185, 296, 1298
SstI	GAGCTC	1 cut(s)	303
StuI	AGGCCT	1 cut(s)	183
StyD4I	CCNGG	1 cut(s)	1059
StyI	CCWWGG	3 cut(s)	9, 264, 713
TaaI	ACNGT	7 cut(s)	208, 595, 775, 965, 994, 1008, 1207
TaiI	ACGT	2 cut(s)	180, 573
TaqI	TCGA	6 cut(s)	309, 636, 762, 817, 960, 1085
TaqII	GACCGA	1 cut(s)	698
TasI	AATT	8 cut(s)	344, 535, 787, 971, 1236, 1302, 1315, 1372
TatI	WGTACW	3 cut(s)	479, 870, 885
Tru1I	TTAA	5 cut(s)	375, 441, 456, 534, 1314
Tru9I	TTAA	5 cut(s)	375, 441, 456, 534, 1314
TscAI	CASTG	3 cut(s)	585, 778, 1144
TseFI	GTSAC	2 cut(s)	1144, 1186
TseI	GCWGC	1 cut(s)	1055
Tsp45I	GTSAC	2 cut(s)	1144, 1186
TspDTI	ATGAA	6 cut(s)	46, 106, 204, 302, 396, 1027
TspRI	CASTG	3 cut(s)	585, 778, 1144
Van91I	CCANNNNNTGG	1 cut(s)	1039
VpaK11BI	GGWCC	2 cut(s)	710, 925
VspI	ATTAAT	1 cut(s)	534
XapI	RAATTY	2 cut(s)	344, 971
XbaI	TCTAGA	1 cut(s)	91
XceI	RCATGY	2 cut(s)	8, 1115
XmiI	GTMKAC	1 cut(s)	309
XspI	CTAG	4 cut(s)	92, 185, 296, 1298
ZrmI	AGTACT	1 cut(s)	481
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.