Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Reverse (-)

44559941 .. 44567768

Gene Structure 7828 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG215300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGACACCAAGTCTCTTACTACTCTTCTCCGCCTTCATCATCCTCTTCTCACCATCCTCATGCTTGAAGCAACATCCCCTAGACTCTCTAACCCCATCCGAGTTCACCCAGATCAAAACCATACTTACAAAAACATACCCAGCACACAACATAAGCTTCCAATACGTTGGCCTAGACGAACCCGAAAAATCCACCGTGATCTTATGGAATTCGAAATCCAACACCAAATCCCTACCTTCTCGCCGGGCCTTGGTCGTTACACGCATTAACAGACAGACTCACGAGTCCATAGTCGATTTGTCAACCAGTTCTGTGGTCTCTGACGTTAAAATAGACGACAAACATGGCTACCCTTTGCTAAACAATGAAGAGCAAACAGCCGTTAGCGAATTGCCGTTTACATACAAACCCTTTCTCAAATCCATTAAAAATAGAGGGCTTAATATATCGCAAGTTGTTTGTACCACTTTTTCGGTTGGTTGGTTTGGAGAGAACAAGAGTAGACTGTCGAAGCTGAATTGTTTTTATACAGATGGGACAGTGAACTTGTACGTGACGCCAGTGGAGGGAATTACAGTGGTGGTTGATCTTGAGAAGGTGAAGATAGTTAAGTATAGTGATAATCTTGTGGTTCCAATGCCAAAACCCGAGGGAACAGAGTACCGGGAGTCCAAGCAGAAACCCCCGTTTGGTCCGCGGCTAAATGGTGCGACAGTACTGCAGTCCGGCGGAGAAGGGTTCAAGCTGGACGGGAACATTGTCAAATGGGCCAACTGGGTCTTCCATCTGGGATTTGATGTTCGAACTGGTGTGGTTATATCCCTAGCATCAATCTATGACCTTGACAAGCACAAATACAGAAGGGTTTTGTACAGAGGTTTTGTGTCAGAGCTCCTTGTACCATACATGGACCCAACCGAGGACTGGTACTACAAAACCTTCTTCGATTGTGGAGAATTCGGGTTCGGCCTCTCAACAGTCTCACTCGAGCCACTGACCGATTGCCCAAGCAATGCCAAGTTCATAGATGGTTACTATGCTGCCAGAGATGGCACGCCAGTGCAGATATCGAATGCCATTTGCATCTTTGAACGACATGCAGGCAACATCTTGTGGCGTCACACAGAAGTTACTATCCCAGATGAAGTGATAACGGAGGCCAGGGCCGATGTGACTCTGGTTGTGAGGATGGTTTCCACCATAGGCAACTATGACTATATTATTGATTGGGAATTCAAACCAAGTGGTTCCATTAAAATAGAGGTTGGATTAACAGGGGTGCTGGAAATTGCAGCGGCTAAATATACCCACATAAACCAAATAAAGGAGGAAGTTCATGGTACGTTGGTGACAGATAACTCCATTGCAGTAAACCATGATCACTTCTTGACCTACCATATTGACCTTGATGTGGATGGTGAAGCCAACTCCTTTGTGAAGAACAATTTCGTGACAAAACGAGTTACAGATCCAAACATACCAAGGAAGAGTTACTGGAATGTTGTAAGCGAAACCGCTAAGACGGAAGCGGATGCACGGATTCACCTAGGCTTGAAGCCAGCCGACCTGGTTGTGGTAAATCCTAATAAGAAGACCAAACCCGGGAACCCTATTGGTTACCGTTTGATTCCAGGGTCATTTGTAAATCCCCTTCTGGTGGAGGATGACTACCCACAAATTCGTGGTGCTTTCACCAACTATAATGTTTGGGTTACACCGTACAACAAGTCTGAAAAATGGGCGGGAGGACCATATGTTGATCAAAGCCGAGGAGATGATACCTTAGCAGTCTGGAGCAAAAGGAATAGGAAGATTGAGAACAAGGACATAGTGTTGTGGTACACCGTTGGGTTTCACCACAATCCTTGCCAAGAGGACTTTCCGATGATGCCAACATTGAGCGGTGGATTTGAGCTCCGGCCAGCTAATTTCTTTGAGAGCAGTCCAGTTCTTAAAGTTAGAACAACACCTCCTCCTAAGCATGTACCATCTCCTAATTGCACCAAGCAAACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

671

Amino Acids

75.54

Weight (kDa)

6.8

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	25 - 107	2.9e-16	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	119 - 211	2.6e-20	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	238 - 651	1.8e-139	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	283
AccBSI	CCGCTC	1 cut(s)	1902
AccI	GTMKAC	1 cut(s)	502
AccII	CGCG	1 cut(s)	697
AciI	CCGC	9 cut(s)	30, 695, 697, 729, 1295, 1515, 1529, 1742, 1902
AclWI	GGATC	1 cut(s)	1463
AcoI	YGGCCR	1 cut(s)	1919
AcsI	RAATTY	4 cut(s)	208, 956, 1232, 1677
AcyI	GRCGYC	2 cut(s)	557, 1117
AgsI	TTSAA	5 cut(s)	67, 742, 1091, 1237, 1555
AhdI	GACNNNNNGTC	1 cut(s)	9
AjnI	CCWGG	3 cut(s)	1160, 1566, 1630
AjuI	GAANNNNNNNTTGG	4 cut(s)	764, 796, 1863, 1895
AleI	CACNNNNGTG	1 cut(s)	1058
AloI	GAACNNNNNNTCC	4 cut(s)	783, 815, 1954, 1986
AluBI	AGCT	6 cut(s)	156, 514, 745, 892, 1915, 1925
AluI	AGCT	6 cut(s)	156, 514, 745, 892, 1915, 1925
Alw21I	GWGCWC	2 cut(s)	894, 1917
Alw26I	GTCTC	3 cut(s)	17, 322, 985
AlwI	GGATC	1 cut(s)	1463
Ama87I	CYCGRG	3 cut(s)	647, 986, 1601
AoxI	GGCC	7 cut(s)	169, 246, 768, 967, 1158, 1164, 1919
ApeKI	GCWGC	2 cut(s)	1040, 1292
ApoI	RAATTY	4 cut(s)	208, 956, 1232, 1677
Asp700I	GAANNNNTTC	1 cut(s)	1445
AspA2I	CCTAGG	1 cut(s)	1546
AspS9I	GGNCC	6 cut(s)	246, 692, 768, 910, 1164, 1748
AsuC2I	CCSGG	4 cut(s)	245, 665, 1602, 1603
AsuHPI	GGTGA	8 cut(s)	42, 97, 610, 1360, 1430, 1535, 1684, 1847
AsuII	TTCGAA	2 cut(s)	212, 802
AvaI	CYCGRG	3 cut(s)	647, 986, 1601
AvaII	GGWCC	3 cut(s)	692, 910, 1748
AvrII	CCTAGG	1 cut(s)	1546
BaeI	ACNNNNGTAYC	2 cut(s)	1332, 1365
BanII	GRGCYC	2 cut(s)	894, 1917
BarI	GAAGNNNNNNTAC	2 cut(s)	1635, 1667
BauI	CACGAG	1 cut(s)	281
BbsI	GAAGAC	2 cut(s)	772, 1598
Bbv12I	GWGCWC	2 cut(s)	894, 1917
BbvI	GCAGC	2 cut(s)	1027, 1304
BccI	CCATC	9 cut(s)	61, 103, 527, 792, 1022, 1043, 1183, 1409, 1996
BceAI	ACGGC	2 cut(s)	365, 379
BcgI	CGANNNNNNTGC	2 cut(s)	700, 734
BciT130I	CCWGG	3 cut(s)	1162, 1568, 1632
BclI	TGATCA	2 cut(s)	1378, 1759
BcnI	CCSGG	4 cut(s)	245, 665, 1602, 1603
BcoDI	GTCTC	3 cut(s)	17, 322, 985
BfaI	CTAG	5 cut(s)	80, 173, 824, 1547, 2014
BfmI	CTRYAG	1 cut(s)	719
BisI	GCNGC	4 cut(s)	698, 1041, 1293, 1296
BlnI	CCTAGG	1 cut(s)	1546
BlsI	GCNGC	4 cut(s)	699, 1042, 1294, 1297
BmcAI	AGTACT	1 cut(s)	717
Bme1390I	CCNGG	7 cut(s)	245, 665, 1162, 1568, 1602, 1603, 1632
Bme18I	GGWCC	3 cut(s)	692, 910, 1748
BmeRI	GACNNNNNGTC	1 cut(s)	9
BmeT110I	CYCGRG	3 cut(s)	647, 986, 1601
BmgT120I	GGNCC	6 cut(s)	246, 692, 768, 910, 1164, 1748
BmiI	GGNNCC	4 cut(s)	633, 912, 1249, 1607
BmrFI	CCNGG	7 cut(s)	245, 665, 1162, 1568, 1602, 1603, 1632
BmrI	ACTGGG	1 cut(s)	784
BmsI	GCATC	4 cut(s)	836, 1092, 1522, 1878
BmuI	ACTGGG	1 cut(s)	784
BpiI	GAAGAC	2 cut(s)	772, 1598
BpmI	CTGGAG	1 cut(s)	1813
Bpu10I	CCTNAGC	2 cut(s)	1783, 1977
Bpu14I	TTCGAA	2 cut(s)	212, 802
BpuEI	CTTGAG	1 cut(s)	611
BpuMI	CCSGG	4 cut(s)	245, 665, 1602, 1603
BsaAI	YACGTR	1 cut(s)	553
BsaHI	GRCGYC	2 cut(s)	557, 1117
BsaI	GGTCTC	1 cut(s)	322
BsaXI	ACNNNNNCTCC	4 cut(s)	1954, 1957, 1984, 1987
Bse1I	ACTGG	8 cut(s)	306, 560, 779, 811, 929, 1058, 1499, 1946
Bse3DI	GCAATG	2 cut(s)	1018, 1362
BseBI	CCWGG	3 cut(s)	1162, 1568, 1632
BseGI	GGATG	8 cut(s)	39, 53, 73, 95, 1194, 1420, 1537, 1669
BseMI	GCAATG	2 cut(s)	1018, 1362
BseNI	ACTGG	8 cut(s)	306, 560, 779, 811, 929, 1058, 1499, 1946
BseRI	GAGGAG	2 cut(s)	1785, 1962
BseXI	GCAGC	2 cut(s)	1027, 1304
BseYI	CCCAGC	1 cut(s)	139
BsgI	GTGCAG	1 cut(s)	1082
Bsh1236I	CGCG	1 cut(s)	697
BshFI	GGCC	7 cut(s)	171, 248, 770, 969, 1160, 1166, 1921
BsiHKAI	GWGCWC	2 cut(s)	894, 1917
BsiHKCI	CYCGRG	3 cut(s)	647, 986, 1601
BsiSI	CCGG	5 cut(s)	244, 664, 726, 1602, 1918
BslFI	GGGAC	1 cut(s)	550
BsmAI	GTCTC	3 cut(s)	17, 322, 985
BsmFI	GGGAC	1 cut(s)	550
BsmI	GAATGC	1 cut(s)	1078
BsnI	GGCC	7 cut(s)	171, 248, 770, 969, 1160, 1166, 1921
Bso31I	GGTCTC	1 cut(s)	322
BsoBI	CYCGRG	3 cut(s)	647, 986, 1601
Bsp119I	TTCGAA	2 cut(s)	212, 802
Bsp1286I	GDGCHC	2 cut(s)	894, 1917
Bsp1407I	TGTACA	1 cut(s)	870
Bsp143I	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
BspACI	CCGC	9 cut(s)	30, 695, 697, 729, 1295, 1515, 1529, 1742, 1902
BspANI	GGCC	7 cut(s)	171, 248, 770, 969, 1160, 1166, 1921
BspFNI	CGCG	1 cut(s)	697
BspLI	GGNNCC	4 cut(s)	633, 912, 1249, 1607
BspMAI	CTGCAG	1 cut(s)	723
BspPI	GGATC	1 cut(s)	1463
BspQI	GCTCTTC	1 cut(s)	363
BspT104I	TTCGAA	2 cut(s)	212, 802
BspTNI	GGTCTC	1 cut(s)	322
BsrBI	CCGCTC	1 cut(s)	1902
BsrDI	GCAATG	2 cut(s)	1018, 1362
BsrGI	TGTACA	1 cut(s)	870
BsrI	ACTGG	8 cut(s)	306, 560, 779, 811, 929, 1058, 1499, 1946
BssMI	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
BssNI	GRCGYC	2 cut(s)	557, 1117
BssSI	CACGAG	1 cut(s)	281
BssT1I	CCWWGG	3 cut(s)	249, 1481, 1546
Bst2BI	CACGAG	1 cut(s)	281
Bst2UI	CCWGG	3 cut(s)	1162, 1568, 1632
Bst4CI	ACNGT	9 cut(s)	196, 507, 541, 577, 715, 979, 1622, 1719, 1846
Bst6I	CTCTTC	4 cut(s)	29, 50, 363, 1481
BstACI	GRCGYC	2 cut(s)	557, 1117
BstAUI	TGTACA	1 cut(s)	870
BstBAI	YACGTR	1 cut(s)	553
BstBI	TTCGAA	2 cut(s)	212, 802
BstC8I	GCNNGC	4 cut(s)	1055, 1102, 1560, 1923
BstDEI	CTNAG	3 cut(s)	1518, 1783, 1977
BstDSI	CCRYGG	1 cut(s)	695
BstEII	GGTNACC	1 cut(s)	1616
BstF5I	GGATG	8 cut(s)	39, 53, 73, 95, 1194, 1420, 1537, 1669
BstFNI	CGCG	1 cut(s)	697
BstKTI	GATC	6 cut(s)	114, 201, 589, 1381, 1471, 1762
BstMAI	GTCTC	3 cut(s)	17, 322, 985
BstMBI	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
BstNI	CCWGG	3 cut(s)	1162, 1568, 1632
BstNSI	RCATGY	2 cut(s)	1100, 1985
BstPI	GGTNACC	1 cut(s)	1616
BstSCI	CCNGG	7 cut(s)	243, 663, 1160, 1566, 1600, 1601, 1630
BstSFI	CTRYAG	1 cut(s)	719
BstUI	CGCG	1 cut(s)	697
BstV1I	GCAGC	2 cut(s)	1027, 1304
BstV2I	GAAGAC	2 cut(s)	772, 1598
BstX2I	RGATCY	1 cut(s)	1468
BstXI	CCANNNNNNTGG	2 cut(s)	167, 313
BstYI	RGATCY	1 cut(s)	1468
BsuRI	GGCC	7 cut(s)	171, 248, 770, 969, 1160, 1166, 1921
BtgI	CCRYGG	1 cut(s)	695
BtsCI	GGATG	8 cut(s)	39, 53, 73, 95, 1194, 1420, 1537, 1669
BtsIMutI	CAGTG	5 cut(s)	546, 567, 582, 992, 1065
Cac8I	GCNNGC	4 cut(s)	1055, 1102, 1560, 1923
Cfr13I	GGNCC	6 cut(s)	246, 692, 768, 910, 1164, 1748
Cfr42I	CCGCGG	1 cut(s)	698
Cfr9I	CCCGGG	1 cut(s)	1601
CseI	GACGC	2 cut(s)	565, 1106
CsiI	ACCWGGT	1 cut(s)	1566
CspCI	CAANNNNNGTGG	4 cut(s)	1225, 1260, 1847, 1882
CviAII	CATG	7 cut(s)	60, 344, 907, 1097, 1337, 1376, 1982
DdeI	CTNAG	3 cut(s)	1518, 1783, 1977
DpnI	GATC	6 cut(s)	113, 200, 588, 1380, 1470, 1761
DpnII	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
DrdI	GACNNNNNNGTC	1 cut(s)	283
DriI	GACNNNNNGTC	1 cut(s)	9
DseDI	GACNNNNNNGTC	1 cut(s)	283
EaeI	YGGCCR	1 cut(s)	1919
Eam1104I	CTCTTC	4 cut(s)	29, 50, 363, 1481
Eam1105I	GACNNNNNGTC	1 cut(s)	9
EarI	CTCTTC	4 cut(s)	29, 50, 363, 1481
EciI	GGCGGA	2 cut(s)	19, 744
Ecl136II	GAGCTC	2 cut(s)	892, 1915
Eco130I	CCWWGG	3 cut(s)	249, 1481, 1546
Eco24I	GRGCYC	2 cut(s)	894, 1917
Eco31I	GGTCTC	1 cut(s)	322
Eco32I	GATATC	1 cut(s)	1068
Eco47I	GGWCC	3 cut(s)	692, 910, 1748
Eco53kI	GAGCTC	2 cut(s)	892, 1915
Eco88I	CYCGRG	3 cut(s)	647, 986, 1601
Eco91I	GGTNACC	1 cut(s)	1616
EcoICRI	GAGCTC	2 cut(s)	892, 1915
EcoO65I	GGTNACC	1 cut(s)	1616
EcoRI	GAATTC	3 cut(s)	208, 956, 1232
EcoRII	CCWGG	3 cut(s)	1160, 1566, 1630
EcoRV	GATATC	1 cut(s)	1068
EcoT14I	CCWWGG	3 cut(s)	249, 1481, 1546
EcoT38I	GRGCYC	2 cut(s)	894, 1917
ErhI	CCWWGG	3 cut(s)	249, 1481, 1546
FaeI	CATG	7 cut(s)	63, 347, 910, 1100, 1340, 1379, 1985
FaqI	GGGAC	1 cut(s)	550
FatI	CATG	7 cut(s)	59, 343, 906, 1096, 1336, 1375, 1981
FauI	CCCGC	1 cut(s)	1735
FauNDI	CATATG	1 cut(s)	1753
FbaI	TGATCA	2 cut(s)	1378, 1759
FblI	GTMKAC	1 cut(s)	502
Fnu4HI	GCNGC	4 cut(s)	698, 1041, 1293, 1296
FokI	GGATG	8 cut(s)	26, 40, 60, 82, 1201, 1427, 1544, 1676
FriOI	GRGCYC	2 cut(s)	894, 1917
Fsp4HI	GCNGC	4 cut(s)	698, 1041, 1293, 1296
FspBI	CTAG	5 cut(s)	80, 173, 824, 1547, 2014
GluI	GCNGC	4 cut(s)	698, 1041, 1293, 1296
GsaI	CCCAGC	1 cut(s)	143
GsuI	CTGGAG	1 cut(s)	1813
HaeIII	GGCC	7 cut(s)	171, 248, 770, 969, 1160, 1166, 1921
HapII	CCGG	5 cut(s)	244, 664, 726, 1602, 1918
HgaI	GACGC	2 cut(s)	565, 1106
Hin1I	GRCGYC	2 cut(s)	557, 1117
Hin1II	CATG	7 cut(s)	63, 347, 910, 1100, 1340, 1379, 1985
HincII	GTYRAC	1 cut(s)	303
HindII	GTYRAC	1 cut(s)	303
HindIII	AAGCTT	1 cut(s)	154
HinfI	GANTC	7 cut(s)	83, 277, 284, 668, 1174, 1540, 1627
HpaII	CCGG	5 cut(s)	244, 664, 726, 1602, 1918
HphI	GGTGA	8 cut(s)	42, 97, 610, 1360, 1430, 1535, 1684, 1847
Hpy166II	GTNNAC	7 cut(s)	105, 303, 399, 503, 544, 1372, 1842
Hpy188I	TCNGA	5 cut(s)	100, 322, 889, 1732, 1884
Hpy188III	TCNNGA	5 cut(s)	281, 590, 1387, 1450, 1792
Hpy8I	GTNNAC	7 cut(s)	105, 303, 399, 503, 544, 1372, 1842
HpyAV	CCTTC	7 cut(s)	43, 246, 589, 728, 855, 949, 1661
HpyCH4III	ACNGT	9 cut(s)	196, 507, 541, 577, 715, 979, 1622, 1719, 1846
HpyCH4IV	ACGT	4 cut(s)	165, 324, 552, 1343
HpyCH4V	TGCA	8 cut(s)	721, 1063, 1083, 1100, 1292, 1367, 1535, 2001
HpyF3I	CTNAG	3 cut(s)	1518, 1783, 1977
HpySE526I	ACGT	4 cut(s)	165, 324, 552, 1343
Hsp92I	GRCGYC	2 cut(s)	557, 1117
Hsp92II	CATG	7 cut(s)	63, 347, 910, 1100, 1340, 1379, 1985
Ksp22I	TGATCA	2 cut(s)	1378, 1759
KspI	CCGCGG	1 cut(s)	698
Kzo9I	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
LguI	GCTCTTC	1 cut(s)	363
LmnI	GCTCC	3 cut(s)	897, 1794, 1920
Lsp1109I	GCAGC	2 cut(s)	1027, 1304
LweI	GCATC	4 cut(s)	836, 1092, 1522, 1878
MabI	ACCWGGT	1 cut(s)	1566
MaeI	CTAG	5 cut(s)	80, 173, 824, 1547, 2014
MaeII	ACGT	4 cut(s)	165, 324, 552, 1343
MalI	GATC	6 cut(s)	113, 200, 588, 1380, 1470, 1761
MbiI	CCGCTC	1 cut(s)	1902
MboI	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
MflI	RGATCY	1 cut(s)	1468
MhlI	GDGCHC	2 cut(s)	894, 1917
MlyI	GAGTC	5 cut(s)	77, 271, 293, 677, 1168
MmeI	TCCRAC	2 cut(s)	243, 1246
MroXI	GAANNNNTTC	1 cut(s)	1445
MseI	TTAA	8 cut(s)	267, 327, 426, 441, 609, 1254, 1271, 1953
MslI	CAYNNNNRTG	2 cut(s)	58, 1058
MspA1I	CMGCKG	2 cut(s)	697, 1295
MspI	CCGG	5 cut(s)	244, 664, 726, 1602, 1918
MspR9I	CCNGG	7 cut(s)	245, 665, 1162, 1568, 1602, 1603, 1632
Mva1269I	GAATGC	1 cut(s)	1078
MvaI	CCWGG	3 cut(s)	1162, 1568, 1632
MvnI	CGCG	1 cut(s)	697
NciI	CCSGG	4 cut(s)	245, 665, 1602, 1603
NdeI	CATATG	1 cut(s)	1753
NdeII	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
NlaIII	CATG	7 cut(s)	63, 347, 910, 1100, 1340, 1379, 1985
NlaIV	GGNNCC	4 cut(s)	633, 912, 1249, 1607
NmeAIII	GCCGAG	1 cut(s)	1793
NmuCI	GTSAC	5 cut(s)	553, 1118, 1171, 1348, 1450
NspI	RCATGY	2 cut(s)	1100, 1985
NspV	TTCGAA	2 cut(s)	212, 802
OliI	CACNNNNGTG	1 cut(s)	1058
PaeR7I	CTCGAG	1 cut(s)	986
PciSI	GCTCTTC	1 cut(s)	363
PctI	GAATGC	1 cut(s)	1078
PdmI	GAANNNNTTC	1 cut(s)	1445
PfeI	GAWTC	2 cut(s)	1540, 1627
PkrI	GCNGC	4 cut(s)	699, 1042, 1294, 1297
PleI	GAGTC	5 cut(s)	77, 271, 292, 676, 1168
PpsI	GAGTC	5 cut(s)	77, 271, 292, 676, 1168
Ppu21I	YACGTR	1 cut(s)	553
Psp124BI	GAGCTC	2 cut(s)	894, 1917
Psp6I	CCWGG	3 cut(s)	1160, 1566, 1630
PspEI	GGTNACC	1 cut(s)	1616
PspFI	CCCAGC	1 cut(s)	139
PspGI	CCWGG	3 cut(s)	1160, 1566, 1630
PspN4I	GGNNCC	4 cut(s)	633, 912, 1249, 1607
PspPI	GGNCC	6 cut(s)	246, 692, 768, 910, 1164, 1748
PspXI	VCTCGAGB	1 cut(s)	986
PstI	CTGCAG	1 cut(s)	723
PsuI	RGATCY	1 cut(s)	1468
RseI	CAYNNNNRTG	2 cut(s)	58, 1058
SacI	GAGCTC	2 cut(s)	894, 1917
SacII	CCGCGG	1 cut(s)	698
SapI	GCTCTTC	1 cut(s)	363
SaqAI	TTAA	8 cut(s)	267, 327, 426, 441, 609, 1254, 1271, 1953
SatI	GCNGC	4 cut(s)	698, 1041, 1293, 1296
Sau3AI	GATC	6 cut(s)	111, 198, 586, 1378, 1468, 1759
Sau96I	GGNCC	6 cut(s)	246, 692, 768, 910, 1164, 1748
ScaI	AGTACT	1 cut(s)	717
SchI	GAGTC	5 cut(s)	77, 271, 293, 677, 1168
ScrFI	CCNGG	7 cut(s)	245, 665, 1162, 1568, 1602, 1603, 1632
SduI	GDGCHC	2 cut(s)	894, 1917
SexAI	ACCWGGT	1 cut(s)	1566
SfaNI	GCATC	4 cut(s)	836, 1092, 1522, 1878
SfcI	CTRYAG	1 cut(s)	719
Sfr274I	CTCGAG	1 cut(s)	986
Sfr303I	CCGCGG	1 cut(s)	698
SfuI	TTCGAA	2 cut(s)	212, 802
SgrBI	CCGCGG	1 cut(s)	698
SinI	GGWCC	3 cut(s)	692, 910, 1748
SlaI	CTCGAG	1 cut(s)	986
SmaI	CCCGGG	1 cut(s)	1603
SmiMI	CAYNNNNRTG	2 cut(s)	58, 1058
SmlI	CTYRAG	2 cut(s)	590, 986
SmoI	CTYRAG	2 cut(s)	590, 986
SsiI	CCGC	9 cut(s)	30, 695, 697, 729, 1295, 1515, 1529, 1742, 1902
SspMI	CTAG	5 cut(s)	80, 173, 824, 1547, 2014
SstI	GAGCTC	2 cut(s)	894, 1917
StyD4I	CCNGG	7 cut(s)	243, 663, 1160, 1566, 1600, 1601, 1630
StyI	CCWWGG	3 cut(s)	249, 1481, 1546
TaaI	ACNGT	9 cut(s)	196, 507, 541, 577, 715, 979, 1622, 1719, 1846
TaiI	ACGT	4 cut(s)	168, 327, 555, 1346
TaqI	TCGA	7 cut(s)	212, 294, 509, 802, 945, 987, 1070
TaqII	GACCGA	1 cut(s)	1013
TatI	WGTACW	2 cut(s)	715, 870
TauI	GCSGC	2 cut(s)	700, 1298
TfiI	GAWTC	2 cut(s)	1540, 1627
Tru1I	TTAA	8 cut(s)	267, 327, 426, 441, 609, 1254, 1271, 1953
Tru9I	TTAA	8 cut(s)	267, 327, 426, 441, 609, 1254, 1271, 1953
TscAI	CASTG	5 cut(s)	546, 567, 582, 999, 1065
TseFI	GTSAC	5 cut(s)	553, 1118, 1171, 1348, 1450
TseI	GCWGC	2 cut(s)	1040, 1292
Tsp45I	GTSAC	5 cut(s)	553, 1118, 1171, 1348, 1450
TspDTI	ATGAA	5 cut(s)	25, 381, 1012, 1158, 1325
TspGWI	ACGGA	3 cut(s)	1169, 1538, 1552
TspMI	CCCGGG	1 cut(s)	1601
TspRI	CASTG	5 cut(s)	546, 567, 582, 999, 1065
VpaK11BI	GGWCC	3 cut(s)	692, 910, 1748
XapI	RAATTY	4 cut(s)	208, 956, 1232, 1677
XceI	RCATGY	2 cut(s)	1100, 1985
XcmI	CCANNNNNNNNNTGG	1 cut(s)	921
XhoI	CTCGAG	1 cut(s)	986
XmaI	CCCGGG	1 cut(s)	1601
XmaJI	CCTAGG	1 cut(s)	1546
XmiI	GTMKAC	1 cut(s)	502
XmnI	GAANNNNTTC	1 cut(s)	1445
XspI	CTAG	5 cut(s)	80, 173, 824, 1547, 2014
ZrmI	AGTACT	1 cut(s)	717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.