Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Forward (+)

23841748 .. 23844362

Gene Structure 2615 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007982

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGCATCGACTGTCTCATTATTCTTCTCCGTTTTCATCGTCACCTTCTCACCAACCTTGTGCCTGAACCAGTACCATCCCCTAGACCCTCTAACCCAGTCGGAGTTCAATCAGATCAAATCCATAATTCAAAGCTCATACCCCTCTCAAAACCTCACGTTCCAATATGTAGGGTTAGACGAACCAGAAAAGTCCACTGTCCTCTTATGGAATTCCAAATCCACAGCCAAATCCTACCCTCCTCGCCGAGCCTCAGTTGTTACGAGACTAAACAAACAAACCCACGAGATTATAGTCGATTTATCAACCCATTCCATTCTCTCGAGTAAAGTTCACAAGGGAAATGGCTACCCTCTGCTAACCGTAGACGAACAAACACTTGCAAATGAGTTGCCTTTTAATTATCAACCATTCATTCAATCCATTAAAAGAAGAGGGCTTAATATATCCCAAGTTGTGTGTAGCGGTTTTACAGTTGGTTGGTTCGGAGAGAGAAAGACTAGAAGAATAATAAAGATTAATTCTTTTTACACAAATGGGACAGCGAACTTGTTTGTGAGGCCAGTGGAGGGAATAACGTTGGTTGTTGATCTTGATATAATGAAGATAGTTCAATACAGTGACAGGGGTGTAGTTCCGGTGCCAAGGGGAGAGAGAACCGAGTATCGGGCCTCAAAGCAGAAGCCGCCTTTTGGTCCACGACTACATGGTGCTTCAGTGTTGTCTGAGGGAGATGGGTTCGTCCTCGACGGGAACATTATCAGATGGGCCAACTGGGTTTTTCATCTCGGATTTGATGTTCGAACGGGAACGATTATATCTCAAGCATCAATTTACGATCTGGACAAGAAGAAATACAGGAGAGTTTTGTACAGAGGGTTTGTCTCAGAGCTGTTTGTGCCTTACATGAACCCAACTGCTGACTGGTACTACAAAACCTTCTTTGACAATGGAGAGTTTGGGTTCGGCCAATCTACTGTCTCACTTGAACCATTGACTGATTGTCCTAACAATGCAAAGTTCAAAGATGCCTACTATGCTTCACAAGAAGGCACACCTGTGAAGATATCGAATGCTATATGTATCTTTGAACGGCATGCAGGAAACATCTTGTGGCGTCACACAGAAGTTACCATCCCAGATGAAGTGATAACGGAGGTGAGGTCGGAGGTGACCCTAGTGGTGAGGATGATTGCAGTTGTGGGCAACTATGACTACATAATCGATTGGGAATTCAAACCAAGTGGATCCATAAAACTTGAGGTTGGGCTCACTGGTGTGCTAGAAACTGAAGGGGTCACATACACCCACAAAGACCAAATAAACGAAGAAGTTTATGGTACACTAGTTACAGATAACACAATTGCTGTGAACCATGACCACTTCTTGACTTACTATCTTGACCTTGATGTGGACGGTGAAGCCAACTCTTTTGTTAAGAACAATTTGGTGACTAAACGTGTGACAGACCGGAGTATCCCAAGAAAGAGTTATTGGACAGTGGTAAGCGAGACTGCAAAGACGGAATCAGATGCAACAATACATTTGGGTTTGAAGCCGTCTGAACTAGTCGTGGTGAACCCTAATAAAAGGACCAAACCTGGGAATTCTGTCGGTTATCGCTTGATTCCAGGATCAGTTGCAGCACCCCTTCTGTTAGAGGATGATTACCCTCAAATTCGGGGTGATTTTACCAAGTACAATGTGTGGGTTACACCGTATAACAAATCTGAAAAATGGGCAGGAGGAAAATATGTTGACCAAAGCCGAGGAGGTGATACCTTAGCAGTTTGGAGTCTCAGGGATAGGGAAATTGAGAACAAAGACATAGTGCTGTGGTACACAATTGGCTTTCACCATGCTCCTTGCCAGGAAGACTTTCCAATGATGCCAACATTAAGTGGTGGATTTGAGCTCCGGCCAACCAATTTCTTTGAGCGCAGTCCGGTGCTTAAAGTTAGAATAACTCGACCTCCTAAGCATGCGGACTCCCCTAATTGCACCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

670

Amino Acids

75.81

Weight (kDa)

7.64

Isoelectric Point (pI)

38.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	26 - 110	2.7e-19	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	118 - 214	9.9e-22	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	242 - 651	1.5e-136	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	640
AccI	GTMKAC	1 cut(s)	366
AciI	CCGC	3 cut(s)	465, 686, 1985
AclI	AACGTT	1 cut(s)	578
AclWI	GGATC	3 cut(s)	1242, 1255, 1642
AcoI	YGGCCR	2 cut(s)	967, 1919
AcsI	RAATTY	4 cut(s)	211, 1232, 1606, 1677
AcuI	CTGAAG	2 cut(s)	699, 1311
AcyI	GRCGYC	1 cut(s)	1117
AfaI	GTAC	6 cut(s)	74, 872, 929, 1342, 1700, 1841
AfiI	CCNNNNNNNGG	5 cut(s)	569, 666, 692, 1411, 1602
AflIII	ACRYGT	1 cut(s)	1459
AgsI	TTSAA	9 cut(s)	109, 131, 419, 614, 989, 1024, 1091, 1237, 1555
AhdI	GACNNNNNGTC	1 cut(s)	1002
AhlI	ACTAGT	2 cut(s)	1345, 1567
AjnI	CCWGG	3 cut(s)	1600, 1630, 1869
AjuI	GAANNNNNNNTTGG	2 cut(s)	1477, 1509
AleI	CACNNNNGTG	2 cut(s)	1058, 1277
AloI	GAACNNNNNNTCC	2 cut(s)	783, 815
AluBI	AGCT	3 cut(s)	135, 892, 1915
AluI	AGCT	3 cut(s)	135, 892, 1915
Alw21I	GWGCWC	1 cut(s)	1917
Alw26I	GTCTC	6 cut(s)	19, 259, 889, 985, 1505, 1802
AlwI	GGATC	3 cut(s)	1242, 1255, 1642
Ama87I	CYCGRG	1 cut(s)	322
AoxI	GGCC	5 cut(s)	560, 669, 768, 967, 1919
ApeKI	GCWGC	1 cut(s)	1643
ApoI	RAATTY	4 cut(s)	211, 1232, 1606, 1677
AseI	ATTAAT	1 cut(s)	519
Asp700I	GAANNNNTTC	1 cut(s)	1878
AspLEI	GCGC	1 cut(s)	1941
AspS9I	GGNCC	4 cut(s)	669, 695, 768, 1593
AsuII	TTCGAA	1 cut(s)	802
AvaI	CYCGRG	1 cut(s)	322
AvaII	GGWCC	2 cut(s)	695, 1593
BaeI	ACNNNNGTAYC	4 cut(s)	1332, 1365, 1459, 1492
BamHI	GGATCC	1 cut(s)	1247
BanI	GGYRCC	1 cut(s)	640
BanII	GRGCYC	2 cut(s)	1272, 1917
BauI	CACGAG	1 cut(s)	284
BbsI	GAAGAC	1 cut(s)	1881
Bbv12I	GWGCWC	1 cut(s)	1917
BbvI	GCAGC	1 cut(s)	1655
BccI	CCATC	4 cut(s)	84, 728, 759, 1142
BceAI	ACGGC	2 cut(s)	1109, 1543
BciT130I	CCWGG	3 cut(s)	1602, 1632, 1871
BciVI	GTATCC	1 cut(s)	1487
BcoDI	GTCTC	6 cut(s)	19, 259, 889, 985, 1505, 1802
BcuI	ACTAGT	2 cut(s)	1345, 1567
BfaI	CTAG	6 cut(s)	83, 501, 1178, 1283, 1346, 1568
BfuI	GTATCC	1 cut(s)	1487
BisI	GCNGC	2 cut(s)	686, 1644
BlsI	GCNGC	2 cut(s)	687, 1645
Bme1390I	CCNGG	3 cut(s)	1602, 1632, 1871
Bme18I	GGWCC	2 cut(s)	695, 1593
BmeRI	GACNNNNNGTC	1 cut(s)	1002
BmeT110I	CYCGRG	1 cut(s)	322
BmgT120I	GGNCC	4 cut(s)	669, 695, 768, 1593
BmiI	GGNNCC	2 cut(s)	642, 1249
BmrFI	CCNGG	3 cut(s)	1602, 1632, 1871
BmrI	ACTGGG	2 cut(s)	91, 784
BmsI	GCATC	5 cut(s)	14, 836, 1018, 1522, 1878
BmuI	ACTGGG	2 cut(s)	91, 784
BpiI	GAAGAC	1 cut(s)	1881
Bpu10I	CCTNAGC	2 cut(s)	1783, 1977
Bpu14I	TTCGAA	1 cut(s)	802
BpuEI	CTTGAG	2 cut(s)	807, 1280
Bsa29I	ATCGAT	1 cut(s)	1224
BsaHI	GRCGYC	1 cut(s)	1117
BsaJI	CCNNGG	3 cut(s)	644, 1601, 1768
BsaWI	WCCGGW	3 cut(s)	637, 1470, 1945
BsaXI	ACNNNNNCTCC	4 cut(s)	1148, 1178, 1957, 1987
Bsc4I	CCNNNNNNNGG	5 cut(s)	569, 666, 692, 1411, 1602
Bse1I	ACTGG	6 cut(s)	70, 97, 563, 779, 929, 1279
BseBI	CCWGG	3 cut(s)	1602, 1632, 1871
BseCI	ATCGAT	1 cut(s)	1224
BseDI	CCNNGG	3 cut(s)	644, 1601, 1768
BseGI	GGATG	4 cut(s)	76, 1134, 1194, 1669
BseLI	CCNNNNNNNGG	5 cut(s)	569, 666, 692, 1411, 1602
BseMII	CTCAG	4 cut(s)	267, 717, 900, 1813
BseNI	ACTGG	6 cut(s)	70, 97, 563, 779, 929, 1279
BseRI	GAGGAG	2 cut(s)	231, 1785
BseXI	GCAGC	1 cut(s)	1655
BshFI	GGCC	5 cut(s)	562, 671, 770, 969, 1921
BshNI	GGYRCC	1 cut(s)	640
BshVI	ATCGAT	1 cut(s)	1224
BsiHKAI	GWGCWC	1 cut(s)	1917
BsiHKCI	CYCGRG	1 cut(s)	322
BsiSI	CCGG	4 cut(s)	638, 1471, 1918, 1946
BslFI	GGGAC	1 cut(s)	553
BslI	CCNNNNNNNGG	5 cut(s)	569, 666, 692, 1411, 1602
BsmAI	GTCTC	6 cut(s)	19, 259, 889, 985, 1505, 1802
BsmFI	GGGAC	1 cut(s)	553
BsmI	GAATGC	1 cut(s)	1078
BsnI	GGCC	5 cut(s)	562, 671, 770, 969, 1921
BsoBI	CYCGRG	1 cut(s)	322
Bsp119I	TTCGAA	1 cut(s)	802
Bsp1286I	GDGCHC	2 cut(s)	1272, 1917
Bsp1407I	TGTACA	1 cut(s)	870
Bsp143I	GATC	5 cut(s)	114, 589, 838, 1247, 1634
BspACI	CCGC	3 cut(s)	465, 686, 1985
BspANI	GGCC	5 cut(s)	562, 671, 770, 969, 1921
BspCNI	CTCAG	4 cut(s)	266, 718, 899, 1812
BspDI	ATCGAT	1 cut(s)	1224
BspLI	GGNNCC	2 cut(s)	642, 1249
BspPI	GGATC	3 cut(s)	1242, 1255, 1642
BspT104I	TTCGAA	1 cut(s)	802
BspT107I	GGYRCC	1 cut(s)	640
BsrGI	TGTACA	1 cut(s)	870
BsrI	ACTGG	6 cut(s)	70, 97, 563, 779, 929, 1279
BssECI	CCNNGG	3 cut(s)	644, 1601, 1768
BssMI	GATC	5 cut(s)	114, 589, 838, 1247, 1634
BssNI	GRCGYC	1 cut(s)	1117
BssSI	CACGAG	1 cut(s)	284
BssT1I	CCWWGG	1 cut(s)	644
Bst2BI	CACGAG	1 cut(s)	284
Bst2UI	CCWGG	3 cut(s)	1602, 1632, 1871
Bst4CI	ACNGT	9 cut(s)	13, 199, 364, 475, 620, 979, 1418, 1501, 1719
Bst6I	CTCTTC	1 cut(s)	427
BstACI	GRCGYC	1 cut(s)	1117
BstAUI	TGTACA	1 cut(s)	870
BstBI	TTCGAA	1 cut(s)	802
BstC8I	GCNNGC	2 cut(s)	1098, 1983
BstDEI	CTNAG	6 cut(s)	253, 726, 886, 1783, 1799, 1977
BstEII	GGTNACC	1 cut(s)	1171
BstF5I	GGATG	4 cut(s)	76, 1134, 1194, 1669
BstHHI	GCGC	1 cut(s)	1941
BstKTI	GATC	5 cut(s)	117, 592, 841, 1250, 1637
BstMAI	GTCTC	6 cut(s)	19, 259, 889, 985, 1505, 1802
BstMBI	GATC	5 cut(s)	114, 589, 838, 1247, 1634
BstMWI	GCNNNNNNNGC	3 cut(s)	685, 898, 1037
BstNI	CCWGG	3 cut(s)	1602, 1632, 1871
BstNSI	RCATGY	2 cut(s)	1100, 1985
BstPI	GGTNACC	1 cut(s)	1171
BstSCI	CCNGG	3 cut(s)	1600, 1630, 1869
BstV1I	GCAGC	1 cut(s)	1655
BstV2I	GAAGAC	1 cut(s)	1881
BstX2I	RGATCY	1 cut(s)	1247
BstYI	RGATCY	1 cut(s)	1247
Bsu15I	ATCGAT	1 cut(s)	1224
BsuI	GTATCC	1 cut(s)	1487
BsuRI	GGCC	5 cut(s)	562, 671, 770, 969, 1921
BsuTUI	ATCGAT	1 cut(s)	1224
BtsCI	GGATG	4 cut(s)	76, 1134, 1194, 1669
BtsIMutI	CAGTG	6 cut(s)	195, 570, 625, 723, 1272, 1506
Cac8I	GCNNGC	2 cut(s)	1098, 1983
CfoI	GCGC	1 cut(s)	1941
Cfr13I	GGNCC	4 cut(s)	669, 695, 768, 1593
ClaI	ATCGAT	1 cut(s)	1224
CseI	GACGC	1 cut(s)	1106
Csp6I	GTAC	6 cut(s)	73, 871, 928, 1341, 1699, 1840
CspCI	CAANNNNNGTGG	2 cut(s)	1225, 1260
CviAII	CATG	6 cut(s)	707, 907, 1097, 1376, 1859, 1982
CviQI	GTAC	6 cut(s)	73, 871, 928, 1341, 1699, 1840
DdeI	CTNAG	6 cut(s)	253, 726, 886, 1783, 1799, 1977
DpnI	GATC	5 cut(s)	116, 591, 840, 1249, 1636
DpnII	GATC	5 cut(s)	114, 589, 838, 1247, 1634
DriI	GACNNNNNGTC	1 cut(s)	1002
EaeI	YGGCCR	2 cut(s)	967, 1919
Eam1104I	CTCTTC	1 cut(s)	427
Eam1105I	GACNNNNNGTC	1 cut(s)	1002
EarI	CTCTTC	1 cut(s)	427
Ecl136II	GAGCTC	1 cut(s)	1915
Eco130I	CCWWGG	1 cut(s)	644
Eco24I	GRGCYC	2 cut(s)	1272, 1917
Eco32I	GATATC	1 cut(s)	1068
Eco47I	GGWCC	2 cut(s)	695, 1593
Eco53kI	GAGCTC	1 cut(s)	1915
Eco57I	CTGAAG	2 cut(s)	699, 1311
Eco88I	CYCGRG	1 cut(s)	322
Eco91I	GGTNACC	1 cut(s)	1171
EcoICRI	GAGCTC	1 cut(s)	1915
EcoO65I	GGTNACC	1 cut(s)	1171
EcoRI	GAATTC	3 cut(s)	211, 1232, 1606
EcoRII	CCWGG	3 cut(s)	1600, 1630, 1869
EcoRV	GATATC	1 cut(s)	1068
EcoT14I	CCWWGG	1 cut(s)	644
EcoT38I	GRGCYC	2 cut(s)	1272, 1917
ErhI	CCWWGG	1 cut(s)	644
FaeI	CATG	6 cut(s)	710, 910, 1100, 1379, 1862, 1985
FaqI	GGGAC	1 cut(s)	553
FatI	CATG	6 cut(s)	706, 906, 1096, 1375, 1858, 1981
FblI	GTMKAC	1 cut(s)	366
Fnu4HI	GCNGC	2 cut(s)	686, 1644
FokI	GGATG	4 cut(s)	63, 1121, 1201, 1676
FriOI	GRGCYC	2 cut(s)	1272, 1917
Fsp4HI	GCNGC	2 cut(s)	686, 1644
FspBI	CTAG	6 cut(s)	83, 501, 1178, 1283, 1346, 1568
GlaI	GCGC	1 cut(s)	1940
GluI	GCNGC	2 cut(s)	686, 1644
HaeIII	GGCC	5 cut(s)	562, 671, 770, 969, 1921
HapII	CCGG	4 cut(s)	638, 1471, 1918, 1946
HgaI	GACGC	1 cut(s)	1106
HhaI	GCGC	1 cut(s)	1941
Hin1I	GRCGYC	1 cut(s)	1117
Hin1II	CATG	6 cut(s)	710, 910, 1100, 1379, 1862, 1985
Hin6I	GCGC	1 cut(s)	1939
HinP1I	GCGC	1 cut(s)	1939
HincII	GTYRAC	1 cut(s)	1759
HindII	GTYRAC	1 cut(s)	1759
HinfI	GANTC	4 cut(s)	1526, 1627, 1795, 1988
HpaII	CCGG	4 cut(s)	638, 1471, 1918, 1946
Hpy188III	TCNNGA	5 cut(s)	322, 593, 842, 1387, 1400
Hpy99I	CGWCG	1 cut(s)	752
HpyAV	CCTTC	5 cut(s)	55, 949, 1043, 1286, 1661
HpyCH4III	ACNGT	9 cut(s)	13, 199, 364, 475, 620, 979, 1418, 1501, 1719
HpyCH4IV	ACGT	3 cut(s)	158, 578, 1459
HpyCH4V	TGCA	8 cut(s)	383, 1016, 1100, 1196, 1517, 1535, 1643, 2001
HpyF10VI	GCNNNNNNNGC	3 cut(s)	685, 898, 1037
HpyF3I	CTNAG	6 cut(s)	253, 726, 886, 1783, 1799, 1977
HpySE526I	ACGT	3 cut(s)	158, 578, 1459
Hsp92I	GRCGYC	1 cut(s)	1117
Hsp92II	CATG	6 cut(s)	710, 910, 1100, 1379, 1862, 1985
HspAI	GCGC	1 cut(s)	1939
Kzo9I	GATC	5 cut(s)	114, 589, 838, 1247, 1634
LmnI	GCTCC	2 cut(s)	1867, 1920
Lsp1109I	GCAGC	1 cut(s)	1655
LweI	GCATC	5 cut(s)	14, 836, 1018, 1522, 1878
MaeI	CTAG	6 cut(s)	83, 501, 1178, 1283, 1346, 1568
MaeII	ACGT	3 cut(s)	158, 578, 1459
MalI	GATC	5 cut(s)	116, 591, 840, 1249, 1636
MboI	GATC	5 cut(s)	114, 589, 838, 1247, 1634
MboII	GAAGA	8 cut(s)	16, 444, 516, 616, 862, 1075, 1340, 1886
MfeI	CAATTG	2 cut(s)	1362, 1845
MflI	RGATCY	1 cut(s)	1247
MhlI	GDGCHC	2 cut(s)	1272, 1917
MlyI	GAGTC	2 cut(s)	1804, 1982
MmeI	TCCRAC	2 cut(s)	81, 1146
MroXI	GAANNNNTTC	1 cut(s)	1878
MseI	TTAA	7 cut(s)	399, 426, 441, 519, 1437, 1898, 1953
MslI	CAYNNNNRTG	2 cut(s)	1058, 1277
MspI	CCGG	4 cut(s)	638, 1471, 1918, 1946
MspR9I	CCNGG	3 cut(s)	1602, 1632, 1871
MunI	CAATTG	2 cut(s)	1362, 1845
Mva1269I	GAATGC	1 cut(s)	1078
MvaI	CCWGG	3 cut(s)	1602, 1632, 1871
MwoI	GCNNNNNNNGC	3 cut(s)	685, 898, 1037
NdeII	GATC	5 cut(s)	114, 589, 838, 1247, 1634
NlaIII	CATG	6 cut(s)	710, 910, 1100, 1379, 1862, 1985
NlaIV	GGNNCC	2 cut(s)	642, 1249
NmeAIII	GCCGAG	2 cut(s)	272, 1793
NmuCI	GTSAC	7 cut(s)	40, 620, 1118, 1171, 1297, 1450, 1462
NspI	RCATGY	2 cut(s)	1100, 1985
NspV	TTCGAA	1 cut(s)	802
OliI	CACNNNNGTG	2 cut(s)	1058, 1277
PaeI	GCATGC	2 cut(s)	1100, 1985
PaeR7I	CTCGAG	1 cut(s)	322
PctI	GAATGC	1 cut(s)	1078
PdmI	GAANNNNTTC	1 cut(s)	1878
PfeI	GAWTC	2 cut(s)	1526, 1627
PfoI	TCCNGGA	1 cut(s)	1630
PkrI	GCNGC	2 cut(s)	687, 1645
PleI	GAGTC	2 cut(s)	1803, 1982
PpsI	GAGTC	2 cut(s)	1803, 1982
PshBI	ATTAAT	1 cut(s)	519
Psp124BI	GAGCTC	1 cut(s)	1917
Psp1406I	AACGTT	1 cut(s)	578
Psp6I	CCWGG	3 cut(s)	1600, 1630, 1869
PspEI	GGTNACC	1 cut(s)	1171
PspGI	CCWGG	3 cut(s)	1600, 1630, 1869
PspN4I	GGNNCC	2 cut(s)	642, 1249
PspPI	GGNCC	4 cut(s)	669, 695, 768, 1593
PsuI	RGATCY	1 cut(s)	1247
RsaI	GTAC	6 cut(s)	74, 872, 929, 1342, 1700, 1841
RsaNI	GTAC	6 cut(s)	73, 871, 928, 1341, 1699, 1840
RseI	CAYNNNNRTG	2 cut(s)	1058, 1277
SacI	GAGCTC	1 cut(s)	1917
SaqAI	TTAA	7 cut(s)	399, 426, 441, 519, 1437, 1898, 1953
SatI	GCNGC	2 cut(s)	686, 1644
Sau3AI	GATC	5 cut(s)	114, 589, 838, 1247, 1634
Sau96I	GGNCC	4 cut(s)	669, 695, 768, 1593
SchI	GAGTC	2 cut(s)	1804, 1982
ScrFI	CCNGG	3 cut(s)	1602, 1632, 1871
SduI	GDGCHC	2 cut(s)	1272, 1917
SfaNI	GCATC	5 cut(s)	14, 836, 1018, 1522, 1878
Sfr274I	CTCGAG	1 cut(s)	322
SfuI	TTCGAA	1 cut(s)	802
SinI	GGWCC	2 cut(s)	695, 1593
SlaI	CTCGAG	1 cut(s)	322
SmiMI	CAYNNNNRTG	2 cut(s)	1058, 1277
SmlI	CTYRAG	3 cut(s)	322, 822, 1259
SmoI	CTYRAG	3 cut(s)	322, 822, 1259
SpeI	ACTAGT	2 cut(s)	1345, 1567
SphI	GCATGC	2 cut(s)	1100, 1985
SsiI	CCGC	3 cut(s)	465, 686, 1985
SspMI	CTAG	6 cut(s)	83, 501, 1178, 1283, 1346, 1568
SstI	GAGCTC	1 cut(s)	1917
StyD4I	CCNGG	3 cut(s)	1600, 1630, 1869
StyI	CCWWGG	1 cut(s)	644
TaaI	ACNGT	9 cut(s)	13, 199, 364, 475, 620, 979, 1418, 1501, 1719
TaiI	ACGT	3 cut(s)	161, 581, 1462
TaqI	TCGA	8 cut(s)	8, 297, 323, 747, 802, 1070, 1224, 1969
TatI	WGTACW	2 cut(s)	870, 1698
TauI	GCSGC	1 cut(s)	688
TfiI	GAWTC	2 cut(s)	1526, 1627
Tru1I	TTAA	7 cut(s)	399, 426, 441, 519, 1437, 1898, 1953
Tru9I	TTAA	7 cut(s)	399, 426, 441, 519, 1437, 1898, 1953
TscAI	CASTG	6 cut(s)	202, 570, 625, 723, 1279, 1506
TseFI	GTSAC	7 cut(s)	40, 620, 1118, 1171, 1297, 1450, 1462
TseI	GCWGC	1 cut(s)	1643
Tsp45I	GTSAC	7 cut(s)	40, 620, 1118, 1171, 1297, 1450, 1462
TspDTI	ATGAA	6 cut(s)	25, 403, 617, 773, 923, 1158
TspGWI	ACGGA	3 cut(s)	19, 1169, 1538
TspRI	CASTG	6 cut(s)	202, 570, 625, 723, 1279, 1506
VpaK11BI	GGWCC	2 cut(s)	695, 1593
VspI	ATTAAT	1 cut(s)	519
XapI	RAATTY	4 cut(s)	211, 1232, 1606, 1677
XceI	RCATGY	2 cut(s)	1100, 1985
XcmI	CCANNNNNNNNNTGG	1 cut(s)	921
XhoI	CTCGAG	1 cut(s)	322
XmiI	GTMKAC	1 cut(s)	366
XmnI	GAANNNNTTC	1 cut(s)	1878
XspI	CTAG	6 cut(s)	83, 501, 1178, 1283, 1346, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.