Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Reverse (-)

39266599 .. 39270292

Gene Structure 3694 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG201800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGACAAAACCTTATACACTTTCTTCTTCAACATGCACGGAGAAGCTGCCATGACTTCTTCAACGTTGATGCTCTTCTTCTTTCTCTCTTCCTTCTTCACCTTCTCACCGATCCCATGCCTCGGCCGGTACCACCCACTAGACCCTCTAACCCCATCTGAGTTCACTCAGGTCCGAACCATCGTTAAAAAATCATACCCCAGTTCCATCCACAACCTCACATTCCAATACATAGCCTTAGACGAGCCAGACAAATACATAGTCAAGTCATGGCTGTCGAAAACAAACTCTAAACCCAAAACCCTACCTCGCCGAGCCTTGGTCATAACAAGGCTCGACAAACACTCCCACGAGATCGTAGTGGACTTATCAACTCATTCCGTAGTCTCCGATAAGGTCTATGGAGGACACGGCTACCCTTTGCTGACGATGGACGAACAAACAGTTGCAAGTGAGCTCCCACTGTCCTACAAACCATTTATCAACTCGGTCAAGAAGAGGGGACTTAACTTGTCCGAGGTTGTTTGCACCACGTTTTCAGTCGGGTGGTTTGGCGAAGAACATAACAAAAGAGTGATCAAAATTTTGTGTTACTATATTGAGGGAACACCTAACTTGTACATGAGACCCTTGGAGGGAATATCACTGGTGGTTGATCTTGATGAACTGAAAATAGCTGAGTATTATGATCGAGATAGGATTCCGGTGCCGAAAGCTCAAGGAACCGAGTATCGGCTGTCGAAGCAGAAGCCGCCTTTCGGTCCAAAATTTAATGGTTTCACCACTGTGCAGCCAGACGGACCTGGGTTTAAGATTGACGGGCACACGATAAGTTGGGCTAACTGGGTCTTCCATCTCGGATTTGATGTTCGAGCCGGTCCAGTAATTTCTACGGCATCGATTTATGACCTCGAAAAGGCCACATACCGTCAGGTATTGTACAGATCATTCATATCCGAGCTGTTTGTGCCATACATGGACCCAACTGAAGAATGGTACTACAAAACCTTCTTTGATGCCGGTGAATTTGGGTTTGGTCAATCTGCTGTGCCGCTAGAGCCCTTGACCGATTGCCCTGAAAATGCTGTATTTATGGACGCTTACTATGCTAGCTCAGATGGGACTCCAGTTAAAATAACAAATGCTTTTTGCATATTTGAGCAACATGCTGGGAGTGCCTTGTGGCGGCACACTGAAATAGCAATTCCAGGGGAACTGATAACCGAGGTTAGACCAGAGGTGAACCTGATAGTGAGGATGGTTTCGACTGTGGGCAACTATGATTATGTACTTGACTGGGAATTTAAGCCAAGCGGTTCCATCAAGTTTGGGGTTGGACTAACAGGAATACTAGAGGTGAAGGGGGCGCCGTACACACATAGTGATCAAATAAAGGAGGATGCTTATGGTACATTGCTTGCAGATTACACCATCGGGGTATACCATGATCACTTCTTGACCTACTATCTTGATCTCGATGTGGATGGGGAAGCCAACTCCTTTGTTAAGAACAATTTGGTGACCAAGAGAGTAACAGATCATAGCTCACCAAGGAAGAGTTACTGGACAGTTGTGAGCGAAACAGCTAAGACGGAATCAGATGCAAAAATTCAACTGGGTTTGAAGCCAGCTGATCTAGTCTTGATAAACCCTAATAAGAAGACTAAACCTGGAAACAACATAGGCTATCGTCTAATTCCAGGGTCAATATCAAACCCACTTTTGTCCCATGACGATTACCCACAAATCCGAGGTGCCTTCACCAACTACAATGTATGGGTCACACCTTATAACAAGTCGGAAAAATGGGCAGGAGGTCAGTTTGTTGATCAGAGCCGTGGAGATGACACTTTGGCTACTTGGAGCCTCAGGAACCGAGAGATTGAGAATAAGGACATTGTGTTATGGTACACCATGGGATTTCATCATGTTCCTTGCCAAGAAGACTTTCCGGTGATGCCAACATTAAGCGGTGGATTTGAGCTCCGGCCTACCAATTTCTTCGAGAGCAACCCGGTGCTTAAAGCAAAACCTCCTAAGCATGAGCACTTGCCTAACTGCACTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

689

Amino Acids

78.18

Weight (kDa)

6.11

Isoelectric Point (pI)

32.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	45 - 132	6.9e-18	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	140 - 237	1.3e-22	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	262 - 674	2.3e-141	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1791
Acc65I	GGTACC	1 cut(s)	129
AccB1I	GGYRCC	4 cut(s)	129, 706, 1366, 1754
AccI	GTMKAC	1 cut(s)	1440
AciI	CCGC	5 cut(s)	752, 1052, 1186, 1314, 1971
AclI	AACGTT	1 cut(s)	65
AclWI	GGATC	1 cut(s)	106
AcoI	YGGCCR	1 cut(s)	124
AcsI	RAATTY	5 cut(s)	582, 767, 1025, 1301, 1608
AcuI	CTGAAG	1 cut(s)	1008
AcyI	GRCGYC	1 cut(s)	1367
AdeI	CACNNNGTG	1 cut(s)	1382
AfaI	GTAC	8 cut(s)	131, 620, 941, 998, 1290, 1373, 1411, 1910
AfiI	CCNNNNNNNGG	7 cut(s)	122, 319, 635, 732, 758, 916, 1185
AgsI	TTSAA	4 cut(s)	31, 63, 1613, 1624
AjnI	CCWGG	4 cut(s)	802, 1207, 1669, 1699
AjuI	GAANNNNNNNTTGG	4 cut(s)	1017, 1049, 1932, 1964
AleI	CACNNNNGTG	1 cut(s)	785
AloI	GAACNNNNNNTCC	2 cut(s)	852, 884
Alw21I	GWGCWC	3 cut(s)	459, 1986, 2049
Alw26I	GTCTC	2 cut(s)	391, 619
AlwI	GGATC	1 cut(s)	106
AoxI	GGCC	3 cut(s)	124, 918, 1988
ApeKI	GCWGC	2 cut(s)	47, 790
ApoI	RAATTY	5 cut(s)	582, 767, 1025, 1301, 1608
ArsI	GACNNNNNNTTYG	2 cut(s)	246, 278
Asp700I	GAANNNNTTC	1 cut(s)	1947
Asp718I	GGTACC	1 cut(s)	129
AspLEI	GCGC	1 cut(s)	1369
AspS9I	GGNCC	5 cut(s)	172, 761, 800, 878, 979
AsuC2I	CCSGG	1 cut(s)	2015
AsuNHI	GCTAGC	1 cut(s)	1109
AvaII	GGWCC	5 cut(s)	172, 761, 800, 878, 979
AxyI	CCTNAGG	1 cut(s)	1868
BaeGI	GKGCMC	1 cut(s)	825
BanI	GGYRCC	4 cut(s)	129, 706, 1366, 1754
BanII	GRGCYC	3 cut(s)	459, 1062, 1986
BauI	CACGAG	1 cut(s)	350
BbsI	GAAGAC	3 cut(s)	841, 1667, 1950
Bbv12I	GWGCWC	3 cut(s)	459, 1986, 2049
BbvI	GCAGC	2 cut(s)	34, 802
BceAI	ACGGC	4 cut(s)	427, 909, 1354, 1821
BciT130I	CCWGG	4 cut(s)	804, 1209, 1671, 1701
BclI	TGATCA	4 cut(s)	576, 1384, 1447, 1828
BcnI	CCSGG	1 cut(s)	2015
BcoDI	GTCTC	2 cut(s)	391, 619
BfaI	CTAG	5 cut(s)	140, 1055, 1110, 1352, 1637
BfoI	RGCGCY	1 cut(s)	1370
BisI	GCNGC	5 cut(s)	48, 752, 791, 1052, 1187
BlsI	GCNGC	5 cut(s)	49, 753, 792, 1053, 1188
Bme1390I	CCNGG	5 cut(s)	804, 1209, 1671, 1701, 2015
Bme18I	GGWCC	5 cut(s)	172, 761, 800, 878, 979
BmgT120I	GGNCC	5 cut(s)	172, 761, 800, 878, 979
BmiI	GGNNCC	9 cut(s)	131, 708, 724, 981, 1318, 1368, 1756, 1865, 1874
BmrFI	CCNGG	5 cut(s)	804, 1209, 1671, 1701, 2015
BmrI	ACTGGG	4 cut(s)	195, 853, 1306, 1625
BmsI	GCATC	6 cut(s)	60, 905, 1006, 1390, 1591, 1947
BmtI	GCTAGC	1 cut(s)	1113
BmuI	ACTGGG	4 cut(s)	195, 853, 1306, 1625
BpiI	GAAGAC	3 cut(s)	841, 1667, 1950
BpmI	CTGGAG	1 cut(s)	1110
Bpu10I	CCTNAGC	1 cut(s)	2037
BpuEI	CTTGAG	1 cut(s)	702
BpuMI	CCSGG	1 cut(s)	2015
Bsa29I	ATCGAT	1 cut(s)	899
BsaHI	GRCGYC	1 cut(s)	1367
BsaI	GGTCTC	1 cut(s)	619
BsaWI	WCCGGW	2 cut(s)	703, 1951
BsaXI	ACNNNNNCTCC	2 cut(s)	329, 359
Bsc4I	CCNNNNNNNGG	7 cut(s)	122, 319, 635, 732, 758, 916, 1185
Bse118I	RCCGGY	3 cut(s)	126, 875, 1019
Bse1I	ACTGG	8 cut(s)	201, 651, 848, 881, 1127, 1301, 1568, 1620
Bse21I	CCTNAGG	1 cut(s)	1868
Bse3DI	GCAATG	1 cut(s)	1412
BseBI	CCWGG	4 cut(s)	804, 1209, 1671, 1701
BseCI	ATCGAT	1 cut(s)	899
BseGI	GGATG	4 cut(s)	207, 1263, 1405, 1489
BseLI	CCNNNNNNNGG	7 cut(s)	122, 319, 635, 732, 758, 916, 1185
BseMI	GCAATG	1 cut(s)	1412
BseMII	CTCAG	5 cut(s)	150, 182, 669, 1128, 1882
BseNI	ACTGG	8 cut(s)	201, 651, 848, 881, 1127, 1301, 1568, 1620
BseSI	GKGCMC	1 cut(s)	825
BseX3I	CGGCCG	1 cut(s)	124
BseXI	GCAGC	2 cut(s)	34, 802
BseYI	CCCAGC	1 cut(s)	1169
BsgI	GTGCAG	2 cut(s)	809, 2044
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	3 cut(s)	126, 920, 1990
BshNI	GGYRCC	4 cut(s)	129, 706, 1366, 1754
BshVI	ATCGAT	1 cut(s)	899
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	3 cut(s)	459, 1986, 2049
BsiSI	CCGG	7 cut(s)	127, 704, 876, 1020, 1952, 1987, 2015
BslFI	GGGAC	3 cut(s)	516, 1135, 1711
BslI	CCNNNNNNNGG	7 cut(s)	122, 319, 635, 732, 758, 916, 1185
BsmAI	GTCTC	2 cut(s)	391, 619
BsmFI	GGGAC	3 cut(s)	516, 1135, 1711
BsnI	GGCC	3 cut(s)	126, 920, 1990
Bso31I	GGTCTC	1 cut(s)	619
Bsp1286I	GDGCHC	5 cut(s)	459, 825, 1062, 1986, 2049
Bsp1407I	TGTACA	2 cut(s)	618, 939
Bsp19I	CCATGG	1 cut(s)	1914
BspACI	CCGC	5 cut(s)	752, 1052, 1186, 1314, 1971
BspANI	GGCC	3 cut(s)	126, 920, 1990
BspCNI	CTCAG	5 cut(s)	151, 181, 670, 1127, 1881
BspDI	ATCGAT	1 cut(s)	899
BspLI	GGNNCC	9 cut(s)	131, 708, 724, 981, 1318, 1368, 1756, 1865, 1874
BspOI	GCTAGC	1 cut(s)	1113
BspPI	GGATC	1 cut(s)	106
BspQI	GCTCTTC	1 cut(s)	80
BspT107I	GGYRCC	4 cut(s)	129, 706, 1366, 1754
BspTNI	GGTCTC	1 cut(s)	619
BsrDI	GCAATG	1 cut(s)	1412
BsrFI	RCCGGY	3 cut(s)	126, 875, 1019
BsrGI	TGTACA	2 cut(s)	618, 939
BsrI	ACTGG	8 cut(s)	201, 651, 848, 881, 1127, 1301, 1568, 1620
BssAI	RCCGGY	3 cut(s)	126, 875, 1019
BssNAI	GTATAC	1 cut(s)	1441
BssNI	GRCGYC	1 cut(s)	1367
BssSI	CACGAG	1 cut(s)	350
BssT1I	CCWWGG	4 cut(s)	318, 630, 1550, 1914
Bst1107I	GTATAC	1 cut(s)	1441
Bst2BI	CACGAG	1 cut(s)	350
Bst2UI	CCWGG	4 cut(s)	804, 1209, 1671, 1701
Bst4CI	ACNGT	6 cut(s)	445, 465, 787, 929, 1270, 1570
Bst6I	CTCTTC	4 cut(s)	80, 94, 491, 1550
BstACI	GRCGYC	1 cut(s)	1367
BstAUI	TGTACA	2 cut(s)	618, 939
BstC8I	GCNNGC	3 cut(s)	1111, 1419, 1629
BstDEI	CTNAG	8 cut(s)	159, 168, 238, 678, 1114, 1587, 1868, 2037
BstDSI	CCRYGG	2 cut(s)	1837, 1914
BstEII	GGTNACC	1 cut(s)	1519
BstENI	CCTNNNNNAGG	1 cut(s)	914
BstF5I	GGATG	4 cut(s)	207, 1263, 1405, 1489
BstH2I	RGCGCY	1 cut(s)	1370
BstHHI	GCGC	1 cut(s)	1369
BstMAI	GTCTC	2 cut(s)	391, 619
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	6 cut(s)	742, 751, 967, 1057, 1106, 1175
BstNI	CCWGG	4 cut(s)	804, 1209, 1671, 1701
BstNSI	RCATGY	2 cut(s)	37, 1169
BstPI	GGTNACC	1 cut(s)	1519
BstSCI	CCNGG	5 cut(s)	802, 1207, 1669, 1699, 2013
BstSLI	GKGCMC	1 cut(s)	825
BstV1I	GCAGC	2 cut(s)	34, 802
BstV2I	GAAGAC	3 cut(s)	841, 1667, 1950
BstZ17I	GTATAC	1 cut(s)	1441
BstZI	CGGCCG	1 cut(s)	124
Bsu15I	ATCGAT	1 cut(s)	899
Bsu36I	CCTNAGG	1 cut(s)	1868
BsuRI	GGCC	3 cut(s)	126, 920, 1990
BsuTUI	ATCGAT	1 cut(s)	899
BtgI	CCRYGG	2 cut(s)	1837, 1914
BtsCI	GGATG	4 cut(s)	207, 1263, 1405, 1489
BtsIMutI	CAGTG	4 cut(s)	461, 644, 783, 1191
Cac8I	GCNNGC	3 cut(s)	1111, 1419, 1629
CfoI	GCGC	1 cut(s)	1369
Cfr10I	RCCGGY	3 cut(s)	126, 875, 1019
Cfr13I	GGNCC	5 cut(s)	172, 761, 800, 878, 979
ClaI	ATCGAT	1 cut(s)	899
CseI	GACGC	1 cut(s)	1106
Csp6I	GTAC	8 cut(s)	130, 619, 940, 997, 1289, 1372, 1410, 1909
CviQI	GTAC	8 cut(s)	130, 619, 940, 997, 1289, 1372, 1410, 1909
DdeI	CTNAG	8 cut(s)	159, 168, 238, 678, 1114, 1587, 1868, 2037
DinI	GGCGCC	1 cut(s)	1368
DraIII	CACNNNGTG	1 cut(s)	1382
EaeI	YGGCCR	1 cut(s)	124
EagI	CGGCCG	1 cut(s)	124
Eam1104I	CTCTTC	4 cut(s)	80, 94, 491, 1550
EarI	CTCTTC	4 cut(s)	80, 94, 491, 1550
Ecl136II	GAGCTC	2 cut(s)	457, 1984
EclXI	CGGCCG	1 cut(s)	124
Eco130I	CCWWGG	4 cut(s)	318, 630, 1550, 1914
Eco24I	GRGCYC	3 cut(s)	459, 1062, 1986
Eco31I	GGTCTC	1 cut(s)	619
Eco47I	GGWCC	5 cut(s)	172, 761, 800, 878, 979
Eco52I	CGGCCG	1 cut(s)	124
Eco53kI	GAGCTC	2 cut(s)	457, 1984
Eco57I	CTGAAG	1 cut(s)	1008
Eco81I	CCTNAGG	1 cut(s)	1868
Eco91I	GGTNACC	1 cut(s)	1519
EcoICRI	GAGCTC	2 cut(s)	457, 1984
EcoNI	CCTNNNNNAGG	1 cut(s)	914
EcoO65I	GGTNACC	1 cut(s)	1519
EcoRII	CCWGG	4 cut(s)	802, 1207, 1669, 1699
EcoT14I	CCWWGG	4 cut(s)	318, 630, 1550, 1914
EcoT38I	GRGCYC	3 cut(s)	459, 1062, 1986
EgeI	GGCGCC	1 cut(s)	1368
EheI	GGCGCC	1 cut(s)	1368
ErhI	CCWWGG	4 cut(s)	318, 630, 1550, 1914
FaqI	GGGAC	3 cut(s)	516, 1135, 1711
FbaI	TGATCA	4 cut(s)	576, 1384, 1447, 1828
FblI	GTMKAC	1 cut(s)	1440
Fnu4HI	GCNGC	5 cut(s)	48, 752, 791, 1052, 1187
FokI	GGATG	4 cut(s)	194, 1270, 1412, 1496
FriOI	GRGCYC	3 cut(s)	459, 1062, 1986
Fsp4HI	GCNGC	5 cut(s)	48, 752, 791, 1052, 1187
FspBI	CTAG	5 cut(s)	140, 1055, 1110, 1352, 1637
GlaI	GCGC	1 cut(s)	1368
GluI	GCNGC	5 cut(s)	48, 752, 791, 1052, 1187
GsaI	CCCAGC	1 cut(s)	1173
GsuI	CTGGAG	1 cut(s)	1110
HaeII	RGCGCY	1 cut(s)	1370
HaeIII	GGCC	3 cut(s)	126, 920, 1990
HapII	CCGG	7 cut(s)	127, 704, 876, 1020, 1952, 1987, 2015
HgaI	GACGC	1 cut(s)	1106
HhaI	GCGC	1 cut(s)	1369
Hin1I	GRCGYC	1 cut(s)	1367
Hin6I	GCGC	1 cut(s)	1367
HinP1I	GCGC	1 cut(s)	1367
HinfI	GANTC	3 cut(s)	700, 1123, 1595
HpaII	CCGG	7 cut(s)	127, 704, 876, 1020, 1952, 1987, 2015
Hpy166II	GTNNAC	6 cut(s)	165, 364, 1243, 1374, 1441, 1911
Hpy188III	TCNNGA	9 cut(s)	493, 659, 692, 1456, 1469, 1475, 1642, 1870, 2005
Hpy8I	GTNNAC	6 cut(s)	165, 364, 1243, 1374, 1441, 1911
HpyAV	CCTTC	5 cut(s)	103, 112, 1018, 1354, 1768
HpyCH4III	ACNGT	6 cut(s)	445, 465, 787, 929, 1270, 1570
HpyCH4IV	ACGT	2 cut(s)	65, 533
HpyCH4V	TGCA	8 cut(s)	37, 449, 528, 790, 1152, 1421, 1604, 2061
HpyF10VI	GCNNNNNNNGC	6 cut(s)	742, 751, 967, 1057, 1106, 1175
HpyF3I	CTNAG	8 cut(s)	159, 168, 238, 678, 1114, 1587, 1868, 2037
HpySE526I	ACGT	2 cut(s)	65, 533
Hsp92I	GRCGYC	1 cut(s)	1367
HspAI	GCGC	1 cut(s)	1367
KasI	GGCGCC	1 cut(s)	1366
KpnI	GGTACC	1 cut(s)	133
Ksp22I	TGATCA	4 cut(s)	576, 1384, 1447, 1828
LguI	GCTCTTC	1 cut(s)	80
LmnI	GCTCC	3 cut(s)	462, 1863, 1989
Lsp1109I	GCAGC	2 cut(s)	34, 802
LweI	GCATC	6 cut(s)	60, 905, 1006, 1390, 1591, 1947
MaeI	CTAG	5 cut(s)	140, 1055, 1110, 1352, 1637
MaeII	ACGT	2 cut(s)	65, 533
MaeIII	GTNAC	5 cut(s)	590, 1519, 1531, 1559, 1780
MhlI	GDGCHC	5 cut(s)	459, 825, 1062, 1986, 2049
Mly113I	GGCGCC	1 cut(s)	1367
MlyI	GAGTC	1 cut(s)	1117
MmeI	TCCRAC	2 cut(s)	1315, 1779
MroXI	GAANNNNTTC	1 cut(s)	1947
MseI	TTAA	9 cut(s)	186, 507, 771, 810, 1131, 1305, 1506, 1967, 2022
MslI	CAYNNNNRTG	1 cut(s)	785
MspA1I	CMGCKG	1 cut(s)	1631
MspI	CCGG	7 cut(s)	127, 704, 876, 1020, 1952, 1987, 2015
MspR9I	CCNGG	5 cut(s)	804, 1209, 1671, 1701, 2015
MvaI	CCWGG	4 cut(s)	804, 1209, 1671, 1701
MwoI	GCNNNNNNNGC	6 cut(s)	742, 751, 967, 1057, 1106, 1175
NarI	GGCGCC	1 cut(s)	1367
NciI	CCSGG	1 cut(s)	2015
NcoI	CCATGG	1 cut(s)	1914
NheI	GCTAGC	1 cut(s)	1109
NlaIV	GGNNCC	9 cut(s)	131, 708, 724, 981, 1318, 1368, 1756, 1865, 1874
NmeAIII	GCCGAG	2 cut(s)	102, 338
NmuCI	GTSAC	2 cut(s)	1519, 1780
NspI	RCATGY	2 cut(s)	37, 1169
OliI	CACNNNNGTG	1 cut(s)	785
PciSI	GCTCTTC	1 cut(s)	80
PdmI	GAANNNNTTC	1 cut(s)	1947
PfeI	GAWTC	2 cut(s)	700, 1595
PkrI	GCNGC	5 cut(s)	49, 753, 792, 1053, 1188
PleI	GAGTC	1 cut(s)	1117
PluTI	GGCGCC	1 cut(s)	1370
PpsI	GAGTC	1 cut(s)	1117
PsiI	TTATAA	1 cut(s)	1791
Psp124BI	GAGCTC	2 cut(s)	459, 1986
Psp1406I	AACGTT	1 cut(s)	65
Psp6I	CCWGG	4 cut(s)	802, 1207, 1669, 1699
PspEI	GGTNACC	1 cut(s)	1519
PspFI	CCCAGC	1 cut(s)	1169
PspGI	CCWGG	4 cut(s)	802, 1207, 1669, 1699
PspN4I	GGNNCC	9 cut(s)	131, 708, 724, 981, 1318, 1368, 1756, 1865, 1874
PspPI	GGNCC	5 cut(s)	172, 761, 800, 878, 979
PvuII	CAGCTG	1 cut(s)	1631
RsaI	GTAC	8 cut(s)	131, 620, 941, 998, 1290, 1373, 1411, 1910
RsaNI	GTAC	8 cut(s)	130, 619, 940, 997, 1289, 1372, 1410, 1909
RseI	CAYNNNNRTG	1 cut(s)	785
SacI	GAGCTC	2 cut(s)	459, 1986
SapI	GCTCTTC	1 cut(s)	80
SaqAI	TTAA	9 cut(s)	186, 507, 771, 810, 1131, 1305, 1506, 1967, 2022
SatI	GCNGC	5 cut(s)	48, 752, 791, 1052, 1187
Sau96I	GGNCC	5 cut(s)	172, 761, 800, 878, 979
SchI	GAGTC	1 cut(s)	1117
ScrFI	CCNGG	5 cut(s)	804, 1209, 1671, 1701, 2015
SduI	GDGCHC	5 cut(s)	459, 825, 1062, 1986, 2049
SfaNI	GCATC	6 cut(s)	60, 905, 1006, 1390, 1591, 1947
SfoI	GGCGCC	1 cut(s)	1368
SinI	GGWCC	5 cut(s)	172, 761, 800, 878, 979
SmiMI	CAYNNNNRTG	1 cut(s)	785
SmlI	CTYRAG	1 cut(s)	717
SmoI	CTYRAG	1 cut(s)	717
SsiI	CCGC	5 cut(s)	752, 1052, 1186, 1314, 1971
SspDI	GGCGCC	1 cut(s)	1366
SspMI	CTAG	5 cut(s)	140, 1055, 1110, 1352, 1637
SstI	GAGCTC	2 cut(s)	459, 1986
StyD4I	CCNGG	5 cut(s)	802, 1207, 1669, 1699, 2013
StyI	CCWWGG	4 cut(s)	318, 630, 1550, 1914
TaaI	ACNGT	6 cut(s)	445, 465, 787, 929, 1270, 1570
TaiI	ACGT	2 cut(s)	68, 536
TaqII	GACCGA	3 cut(s)	478, 749, 1082
TatI	WGTACW	3 cut(s)	618, 939, 1288
TauI	GCSGC	3 cut(s)	754, 1054, 1189
TfiI	GAWTC	2 cut(s)	700, 1595
Tru1I	TTAA	9 cut(s)	186, 507, 771, 810, 1131, 1305, 1506, 1967, 2022
Tru9I	TTAA	9 cut(s)	186, 507, 771, 810, 1131, 1305, 1506, 1967, 2022
TscAI	CASTG	4 cut(s)	468, 651, 790, 1198
TseFI	GTSAC	2 cut(s)	1519, 1780
TseI	GCWGC	2 cut(s)	47, 790
Tsp45I	GTSAC	2 cut(s)	1519, 1780
TspDTI	ATGAA	3 cut(s)	678, 940, 1913
TspGWI	ACGGA	4 cut(s)	54, 370, 813, 1607
TspRI	CASTG	4 cut(s)	468, 651, 790, 1198
VpaK11BI	GGWCC	5 cut(s)	172, 761, 800, 878, 979
XagI	CCTNNNNNAGG	1 cut(s)	914
XapI	RAATTY	5 cut(s)	582, 767, 1025, 1301, 1608
XceI	RCATGY	2 cut(s)	37, 1169
XcmI	CCANNNNNNNNNTGG	1 cut(s)	990
XmiI	GTMKAC	1 cut(s)	1440
XmnI	GAANNNNTTC	1 cut(s)	1947
XspI	CTAG	5 cut(s)	140, 1055, 1110, 1352, 1637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.