Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Reverse (-)

44591179 .. 44593446

Gene Structure 2268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG215500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGGAAATGGCTACCCTCTGCTAACCGTAGACGAACAAACACTTGCAAATGAGTTGCCTTTTAATTATCAACCATTCATTCAATCCATTAAAAGGAGAGGGCTTAATATATCCCAAGTTGTGTGTAGCGGTTTTACAGTTGGTTGGTTCGGAGAGGGAAAGACTAGAAGAATAATAAAGATTAATTCTTTTTACACAAATGGGACAGTGAACTTGTTTGTGAGGCCAGTGGAGGGAATAACGTTGGTTGTTGATCTTGATATAATGAAGATAGTTCAATACAGTGACAGGGGTGTAGTTCCGGTGCCAAGGGGAGAGGGAACCGAGTACCGGGCCTCAAAGCAGAAGCCGCCTTTTGGTCCACGACTAAATGGTGCTTCAGTGTTGTCTGAGGGAGATGGGTTCGTCCTCGACGGGAACATTATCAGATGGGCCAACTGGATTTTTCATCTCGGATTTGATGTTCGAACTGGAACGATTATATCTCAAGCATCAATTTACGATCTGGACCAGAAGAAATACAGGAGAGTTTTGTACAGAGGGTTTGTCTCAGAGCTGTTTGTGCCTTACATGAACCCAACTGCTGACTGGTACTACAAAACCTTCTTTGACAATGGAGAGTTTGGGTTCGGCCAAAGTACTGTCTCACTTGAACCATTGACTGATTGTCCTAACAATGCAAAGTTCATAGATGCCTACTATGCTTCACAAGAAGGCACACCTGTGAAGATATCGAATGCTATATGTATCTTTGAAAGGCATGCAGGAAACATCTTGTGGCGTCACACAGAAGTTACCATCCCAGATGAAGTGATAACGGAGGTGAGGTCGGAGGTGACCCTAGTGGTGAGGATGATTGCAGTTGTGGGCAACTATGACTACATAATCGATTGGGAATTCAAACCAAGTGGATCCATAAAACTTGAGGTTGGGCTCACCGGTGTGCTAGAAACTGAAGGGGTCACATACACCCACAAAGACCAAATAAACGAAGAAGTTTATGGTACACTAGTTACAGATAACACAATTGCTGTGAATCATGACCACTTCTTGACTTACTATCTTGACCTTGATGTGGACGGTGAAGCCAACTCTTTTGTTAAGAACAATTTGGTGACCAAACGTGTGACAGACCGGAGTATCCCAAGAAAGAGTTATTGGACAGTGGTAAGCGAGACTGCTAAGACGGAATCAGATGCAAAAATTCATTTGGGTTTGAAGCCGTCTGAACTAGTCATGGTGAACCCTAATAAAAGGACCAAACCTGGGAATTCTGTTGGTTATCGCTTGATTCCAGGATCAGTTGCAGCACCCCTTCTGTTAGAGGATGATTACCCTCAAATTCGGGGTGCTTTTACTAAGTACAATGTGTGGGTTACACCGTATAACAAGTCTGAAAAATGGGCAGGAGGAAAATATGTTGACCAAAGCCGAGGAGGTGATACCTTAGCAGTTTGGAGTCTCAGGGATAGGGAAATTGAGAACAAAGACATAGTGCTGTGGTACACAATTGGCTTTCACCATGCTCCTTGCCAGGAAGACTTTCCAATGATGCCAACATTAAGTGGTGGATTTGAGCTCCGGCCAACCAATTTCTTTGAGCGCAGTCCGGTGCTTAAAGTTAGAATAACACCACCTCCTAAGCATGCGGACTCCCCTAATTGCACCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

557

Amino Acids

62.93

Weight (kDa)

6.12

Isoelectric Point (pI)

35.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN3	PF02728	6 - 102	2.1e-21	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	130 - 539	1.9e-137	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	304
AccI	GTMKAC	1 cut(s)	30
AciI	CCGC	3 cut(s)	129, 350, 1649
AclI	AACGTT	1 cut(s)	242
AclWI	GGATC	3 cut(s)	906, 919, 1306
AcoI	YGGCCR	2 cut(s)	631, 1583
AcsI	RAATTY	4 cut(s)	896, 1203, 1270, 1341
AcuI	CTGAAG	2 cut(s)	363, 975
AcyI	GRCGYC	1 cut(s)	781
AfaI	GTAC	7 cut(s)	329, 536, 593, 640, 1006, 1364, 1505
AfiI	CCNNNNNNNGG	6 cut(s)	93, 233, 330, 356, 1075, 1266
AflIII	ACRYGT	1 cut(s)	1123
AgeI	ACCGGT	1 cut(s)	938
AgsI	TTSAA	6 cut(s)	83, 278, 653, 755, 901, 1219
AhdI	GACNNNNNGTC	1 cut(s)	666
AhlI	ACTAGT	2 cut(s)	1009, 1231
AjnI	CCWGG	3 cut(s)	1264, 1294, 1533
AjuI	GAANNNNNNNTTGG	2 cut(s)	1141, 1173
AleI	CACNNNNGTG	2 cut(s)	722, 941
AloI	GAACNNNNNNTCC	2 cut(s)	447, 479
AluBI	AGCT	2 cut(s)	556, 1579
AluI	AGCT	2 cut(s)	556, 1579
Alw21I	GWGCWC	1 cut(s)	1581
Alw26I	GTCTC	4 cut(s)	553, 649, 1169, 1466
AlwI	GGATC	3 cut(s)	906, 919, 1306
AoxI	GGCC	5 cut(s)	224, 333, 432, 631, 1583
ApeKI	GCWGC	1 cut(s)	1307
ApoI	RAATTY	4 cut(s)	896, 1203, 1270, 1341
AseI	ATTAAT	1 cut(s)	183
AsiGI	ACCGGT	1 cut(s)	938
Asp700I	GAANNNNTTC	1 cut(s)	1542
AspLEI	GCGC	1 cut(s)	1605
AspS9I	GGNCC	5 cut(s)	333, 359, 432, 508, 1257
AsuC2I	CCSGG	1 cut(s)	332
AsuHPI	GGTGA	9 cut(s)	835, 847, 859, 928, 1094, 1126, 1252, 1451, 1511
AsuII	TTCGAA	1 cut(s)	466
AvaII	GGWCC	3 cut(s)	359, 508, 1257
BaeI	ACNNNNGTAYC	4 cut(s)	996, 1029, 1123, 1156
BamHI	GGATCC	1 cut(s)	911
BanI	GGYRCC	1 cut(s)	304
BanII	GRGCYC	2 cut(s)	936, 1581
BbsI	GAAGAC	1 cut(s)	1545
Bbv12I	GWGCWC	1 cut(s)	1581
BbvI	GCAGC	1 cut(s)	1319
BccI	CCATC	3 cut(s)	392, 423, 806
BceAI	ACGGC	1 cut(s)	1207
BciT130I	CCWGG	3 cut(s)	1266, 1296, 1535
BciVI	GTATCC	1 cut(s)	1151
BcnI	CCSGG	1 cut(s)	332
BcoDI	GTCTC	4 cut(s)	553, 649, 1169, 1466
BcuI	ACTAGT	2 cut(s)	1009, 1231
BfaI	CTAG	5 cut(s)	165, 842, 947, 1010, 1232
BfuI	GTATCC	1 cut(s)	1151
BisI	GCNGC	2 cut(s)	350, 1308
BlsI	GCNGC	2 cut(s)	351, 1309
BmcAI	AGTACT	1 cut(s)	640
Bme1390I	CCNGG	4 cut(s)	332, 1266, 1296, 1535
Bme18I	GGWCC	3 cut(s)	359, 508, 1257
BmeRI	GACNNNNNGTC	1 cut(s)	666
BmgT120I	GGNCC	5 cut(s)	333, 359, 432, 508, 1257
BmiI	GGNNCC	3 cut(s)	306, 322, 913
BmrFI	CCNGG	4 cut(s)	332, 1266, 1296, 1535
BmsI	GCATC	4 cut(s)	500, 682, 1186, 1542
BpiI	GAAGAC	1 cut(s)	1545
Bpu10I	CCTNAGC	2 cut(s)	1447, 1641
Bpu14I	TTCGAA	1 cut(s)	466
BpuEI	CTTGAG	2 cut(s)	471, 944
BpuMI	CCSGG	1 cut(s)	332
Bsa29I	ATCGAT	1 cut(s)	888
BsaHI	GRCGYC	1 cut(s)	781
BsaJI	CCNNGG	3 cut(s)	308, 1265, 1432
BsaWI	WCCGGW	4 cut(s)	301, 938, 1134, 1609
BsaXI	ACNNNNNCTCC	4 cut(s)	812, 842, 1621, 1651
Bsc4I	CCNNNNNNNGG	6 cut(s)	93, 233, 330, 356, 1075, 1266
Bse118I	RCCGGY	1 cut(s)	938
Bse1I	ACTGG	4 cut(s)	227, 443, 475, 593
BseBI	CCWGG	3 cut(s)	1266, 1296, 1535
BseCI	ATCGAT	1 cut(s)	888
BseDI	CCNNGG	3 cut(s)	308, 1265, 1432
BseGI	GGATG	3 cut(s)	798, 858, 1333
BseLI	CCNNNNNNNGG	6 cut(s)	93, 233, 330, 356, 1075, 1266
BseMII	CTCAG	3 cut(s)	381, 564, 1477
BseNI	ACTGG	4 cut(s)	227, 443, 475, 593
BseRI	GAGGAG	1 cut(s)	1449
BseXI	GCAGC	1 cut(s)	1319
BshFI	GGCC	5 cut(s)	226, 335, 434, 633, 1585
BshNI	GGYRCC	1 cut(s)	304
BshTI	ACCGGT	1 cut(s)	938
BshVI	ATCGAT	1 cut(s)	888
BsiHKAI	GWGCWC	1 cut(s)	1581
BsiSI	CCGG	6 cut(s)	302, 331, 939, 1135, 1582, 1610
BslFI	GGGAC	1 cut(s)	217
BslI	CCNNNNNNNGG	6 cut(s)	93, 233, 330, 356, 1075, 1266
BsmAI	GTCTC	4 cut(s)	553, 649, 1169, 1466
BsmFI	GGGAC	1 cut(s)	217
BsmI	GAATGC	1 cut(s)	742
BsnI	GGCC	5 cut(s)	226, 335, 434, 633, 1585
Bsp119I	TTCGAA	1 cut(s)	466
Bsp1286I	GDGCHC	2 cut(s)	936, 1581
Bsp1407I	TGTACA	1 cut(s)	534
Bsp143I	GATC	4 cut(s)	253, 502, 911, 1298
BspACI	CCGC	3 cut(s)	129, 350, 1649
BspANI	GGCC	5 cut(s)	226, 335, 434, 633, 1585
BspCNI	CTCAG	3 cut(s)	382, 563, 1476
BspDI	ATCGAT	1 cut(s)	888
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	3 cut(s)	306, 322, 913
BspPI	GGATC	3 cut(s)	906, 919, 1306
BspT104I	TTCGAA	1 cut(s)	466
BspT107I	GGYRCC	1 cut(s)	304
BsrFI	RCCGGY	1 cut(s)	938
BsrGI	TGTACA	1 cut(s)	534
BsrI	ACTGG	4 cut(s)	227, 443, 475, 593
BssAI	RCCGGY	1 cut(s)	938
BssECI	CCNNGG	3 cut(s)	308, 1265, 1432
BssMI	GATC	4 cut(s)	253, 502, 911, 1298
BssNI	GRCGYC	1 cut(s)	781
BssT1I	CCWWGG	1 cut(s)	308
Bst2UI	CCWGG	3 cut(s)	1266, 1296, 1535
Bst4CI	ACNGT	8 cut(s)	28, 139, 208, 284, 643, 1082, 1165, 1383
BstACI	GRCGYC	1 cut(s)	781
BstAUI	TGTACA	1 cut(s)	534
BstBI	TTCGAA	1 cut(s)	466
BstC8I	GCNNGC	2 cut(s)	762, 1647
BstDEI	CTNAG	7 cut(s)	390, 550, 1182, 1359, 1447, 1463, 1641
BstEII	GGTNACC	2 cut(s)	835, 1114
BstF5I	GGATG	3 cut(s)	798, 858, 1333
BstHHI	GCGC	1 cut(s)	1605
BstKTI	GATC	4 cut(s)	256, 505, 914, 1301
BstMAI	GTCTC	4 cut(s)	553, 649, 1169, 1466
BstMBI	GATC	4 cut(s)	253, 502, 911, 1298
BstMWI	GCNNNNNNNGC	3 cut(s)	349, 562, 701
BstNI	CCWGG	3 cut(s)	1266, 1296, 1535
BstNSI	RCATGY	2 cut(s)	764, 1649
BstPI	GGTNACC	2 cut(s)	835, 1114
BstSCI	CCNGG	4 cut(s)	330, 1264, 1294, 1533
BstV1I	GCAGC	1 cut(s)	1319
BstV2I	GAAGAC	1 cut(s)	1545
BstX2I	RGATCY	1 cut(s)	911
BstYI	RGATCY	1 cut(s)	911
Bsu15I	ATCGAT	1 cut(s)	888
BsuI	GTATCC	1 cut(s)	1151
BsuRI	GGCC	5 cut(s)	226, 335, 434, 633, 1585
BsuTUI	ATCGAT	1 cut(s)	888
BtsCI	GGATG	3 cut(s)	798, 858, 1333
BtsIMutI	CAGTG	5 cut(s)	213, 234, 289, 387, 1170
Cac8I	GCNNGC	2 cut(s)	762, 1647
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	1 cut(s)	1605
Cfr10I	RCCGGY	1 cut(s)	938
Cfr13I	GGNCC	5 cut(s)	333, 359, 432, 508, 1257
ClaI	ATCGAT	1 cut(s)	888
CseI	GACGC	1 cut(s)	770
Csp6I	GTAC	7 cut(s)	328, 535, 592, 639, 1005, 1363, 1504
CspAI	ACCGGT	1 cut(s)	938
CspCI	CAANNNNNGTGG	2 cut(s)	889, 924
CviAII	CATG	6 cut(s)	571, 761, 1040, 1237, 1523, 1646
CviQI	GTAC	7 cut(s)	328, 535, 592, 639, 1005, 1363, 1504
DdeI	CTNAG	7 cut(s)	390, 550, 1182, 1359, 1447, 1463, 1641
DpnI	GATC	4 cut(s)	255, 504, 913, 1300
DpnII	GATC	4 cut(s)	253, 502, 911, 1298
DriI	GACNNNNNGTC	1 cut(s)	666
EaeI	YGGCCR	2 cut(s)	631, 1583
Eam1105I	GACNNNNNGTC	1 cut(s)	666
Ecl136II	GAGCTC	1 cut(s)	1579
Eco130I	CCWWGG	1 cut(s)	308
Eco24I	GRGCYC	2 cut(s)	936, 1581
Eco32I	GATATC	1 cut(s)	732
Eco47I	GGWCC	3 cut(s)	359, 508, 1257
Eco53kI	GAGCTC	1 cut(s)	1579
Eco57I	CTGAAG	2 cut(s)	363, 975
Eco91I	GGTNACC	2 cut(s)	835, 1114
EcoICRI	GAGCTC	1 cut(s)	1579
EcoO65I	GGTNACC	2 cut(s)	835, 1114
EcoRI	GAATTC	2 cut(s)	896, 1270
EcoRII	CCWGG	3 cut(s)	1264, 1294, 1533
EcoRV	GATATC	1 cut(s)	732
EcoT14I	CCWWGG	1 cut(s)	308
EcoT38I	GRGCYC	2 cut(s)	936, 1581
ErhI	CCWWGG	1 cut(s)	308
FaeI	CATG	6 cut(s)	574, 764, 1043, 1240, 1526, 1649
FaqI	GGGAC	1 cut(s)	217
FatI	CATG	6 cut(s)	570, 760, 1039, 1236, 1522, 1645
FblI	GTMKAC	1 cut(s)	30
Fnu4HI	GCNGC	2 cut(s)	350, 1308
FokI	GGATG	3 cut(s)	785, 865, 1340
FriOI	GRGCYC	2 cut(s)	936, 1581
Fsp4HI	GCNGC	2 cut(s)	350, 1308
FspBI	CTAG	5 cut(s)	165, 842, 947, 1010, 1232
GlaI	GCGC	1 cut(s)	1604
GluI	GCNGC	2 cut(s)	350, 1308
HaeIII	GGCC	5 cut(s)	226, 335, 434, 633, 1585
HapII	CCGG	6 cut(s)	302, 331, 939, 1135, 1582, 1610
HgaI	GACGC	1 cut(s)	770
HhaI	GCGC	1 cut(s)	1605
Hin1I	GRCGYC	1 cut(s)	781
Hin1II	CATG	6 cut(s)	574, 764, 1043, 1240, 1526, 1649
Hin6I	GCGC	1 cut(s)	1603
HinP1I	GCGC	1 cut(s)	1603
HincII	GTYRAC	1 cut(s)	1423
HindII	GTYRAC	1 cut(s)	1423
HinfI	GANTC	5 cut(s)	1036, 1190, 1291, 1459, 1652
HpaII	CCGG	6 cut(s)	302, 331, 939, 1135, 1582, 1610
HphI	GGTGA	9 cut(s)	835, 847, 859, 928, 1094, 1126, 1252, 1451, 1511
Hpy166II	GTNNAC	8 cut(s)	31, 211, 362, 1007, 1078, 1243, 1423, 1506
Hpy188I	TCNGA	9 cut(s)	152, 391, 428, 455, 553, 832, 1195, 1228, 1396
Hpy188III	TCNNGA	5 cut(s)	257, 506, 1040, 1051, 1064
Hpy8I	GTNNAC	8 cut(s)	31, 211, 362, 1007, 1078, 1243, 1423, 1506
Hpy99I	CGWCG	1 cut(s)	416
HpyAV	CCTTC	4 cut(s)	613, 707, 950, 1325
HpyCH4III	ACNGT	8 cut(s)	28, 139, 208, 284, 643, 1082, 1165, 1383
HpyCH4IV	ACGT	2 cut(s)	242, 1123
HpyCH4V	TGCA	7 cut(s)	47, 680, 764, 860, 1199, 1307, 1665
HpyF10VI	GCNNNNNNNGC	3 cut(s)	349, 562, 701
HpyF3I	CTNAG	7 cut(s)	390, 550, 1182, 1359, 1447, 1463, 1641
HpySE526I	ACGT	2 cut(s)	242, 1123
Hsp92I	GRCGYC	1 cut(s)	781
Hsp92II	CATG	6 cut(s)	574, 764, 1043, 1240, 1526, 1649
HspAI	GCGC	1 cut(s)	1603
Kzo9I	GATC	4 cut(s)	253, 502, 911, 1298
LmnI	GCTCC	2 cut(s)	1531, 1584
Lsp1109I	GCAGC	1 cut(s)	1319
LweI	GCATC	4 cut(s)	500, 682, 1186, 1542
MaeI	CTAG	5 cut(s)	165, 842, 947, 1010, 1232
MaeII	ACGT	2 cut(s)	242, 1123
MaeIII	GTNAC	9 cut(s)	284, 782, 793, 835, 961, 1012, 1114, 1126, 1375
MalI	GATC	4 cut(s)	255, 504, 913, 1300
MboI	GATC	4 cut(s)	253, 502, 911, 1298
MboII	GAAGA	6 cut(s)	180, 280, 526, 739, 1004, 1550
MfeI	CAATTG	2 cut(s)	1026, 1509
MflI	RGATCY	1 cut(s)	911
MhlI	GDGCHC	2 cut(s)	936, 1581
MlyI	GAGTC	2 cut(s)	1468, 1646
MmeI	TCCRAC	1 cut(s)	810
MroXI	GAANNNNTTC	1 cut(s)	1542
MseI	TTAA	7 cut(s)	63, 90, 105, 183, 1101, 1562, 1617
MslI	CAYNNNNRTG	2 cut(s)	722, 941
MspI	CCGG	6 cut(s)	302, 331, 939, 1135, 1582, 1610
MspR9I	CCNGG	4 cut(s)	332, 1266, 1296, 1535
MunI	CAATTG	2 cut(s)	1026, 1509
Mva1269I	GAATGC	1 cut(s)	742
MvaI	CCWGG	3 cut(s)	1266, 1296, 1535
MwoI	GCNNNNNNNGC	3 cut(s)	349, 562, 701
NciI	CCSGG	1 cut(s)	332
NdeII	GATC	4 cut(s)	253, 502, 911, 1298
NlaIII	CATG	6 cut(s)	574, 764, 1043, 1240, 1526, 1649
NlaIV	GGNNCC	3 cut(s)	306, 322, 913
NmeAIII	GCCGAG	1 cut(s)	1457
NmuCI	GTSAC	6 cut(s)	284, 782, 835, 961, 1114, 1126
NspI	RCATGY	2 cut(s)	764, 1649
NspV	TTCGAA	1 cut(s)	466
OliI	CACNNNNGTG	2 cut(s)	722, 941
PaeI	GCATGC	2 cut(s)	764, 1649
PagI	TCATGA	1 cut(s)	1039
PctI	GAATGC	1 cut(s)	742
PdmI	GAANNNNTTC	1 cut(s)	1542
PfeI	GAWTC	3 cut(s)	1036, 1190, 1291
PfoI	TCCNGGA	1 cut(s)	1294
PinAI	ACCGGT	1 cut(s)	938
PkrI	GCNGC	2 cut(s)	351, 1309
PleI	GAGTC	2 cut(s)	1467, 1646
PpsI	GAGTC	2 cut(s)	1467, 1646
PshBI	ATTAAT	1 cut(s)	183
Psp124BI	GAGCTC	1 cut(s)	1581
Psp1406I	AACGTT	1 cut(s)	242
Psp6I	CCWGG	3 cut(s)	1264, 1294, 1533
PspEI	GGTNACC	2 cut(s)	835, 1114
PspGI	CCWGG	3 cut(s)	1264, 1294, 1533
PspN4I	GGNNCC	3 cut(s)	306, 322, 913
PspPI	GGNCC	5 cut(s)	333, 359, 432, 508, 1257
PsuI	RGATCY	1 cut(s)	911
RsaI	GTAC	7 cut(s)	329, 536, 593, 640, 1006, 1364, 1505
RsaNI	GTAC	7 cut(s)	328, 535, 592, 639, 1005, 1363, 1504
RseI	CAYNNNNRTG	2 cut(s)	722, 941
SacI	GAGCTC	1 cut(s)	1581
SaqAI	TTAA	7 cut(s)	63, 90, 105, 183, 1101, 1562, 1617
SatI	GCNGC	2 cut(s)	350, 1308
Sau3AI	GATC	4 cut(s)	253, 502, 911, 1298
Sau96I	GGNCC	5 cut(s)	333, 359, 432, 508, 1257
ScaI	AGTACT	1 cut(s)	640
SchI	GAGTC	2 cut(s)	1468, 1646
ScrFI	CCNGG	4 cut(s)	332, 1266, 1296, 1535
SduI	GDGCHC	2 cut(s)	936, 1581
SfaNI	GCATC	4 cut(s)	500, 682, 1186, 1542
SfuI	TTCGAA	1 cut(s)	466
SgrAI	CRCCGGYG	1 cut(s)	938
SinI	GGWCC	3 cut(s)	359, 508, 1257
SmiMI	CAYNNNNRTG	2 cut(s)	722, 941
SmlI	CTYRAG	2 cut(s)	486, 923
SmoI	CTYRAG	2 cut(s)	486, 923
SpeI	ACTAGT	2 cut(s)	1009, 1231
SphI	GCATGC	2 cut(s)	764, 1649
SsiI	CCGC	3 cut(s)	129, 350, 1649
SspMI	CTAG	5 cut(s)	165, 842, 947, 1010, 1232
SstI	GAGCTC	1 cut(s)	1581
StyD4I	CCNGG	4 cut(s)	330, 1264, 1294, 1533
StyI	CCWWGG	1 cut(s)	308
TaaI	ACNGT	8 cut(s)	28, 139, 208, 284, 643, 1082, 1165, 1383
TaiI	ACGT	2 cut(s)	245, 1126
TaqI	TCGA	4 cut(s)	411, 466, 734, 888
TatI	WGTACW	3 cut(s)	534, 638, 1362
TauI	GCSGC	1 cut(s)	352
TfiI	GAWTC	3 cut(s)	1036, 1190, 1291
Tru1I	TTAA	7 cut(s)	63, 90, 105, 183, 1101, 1562, 1617
Tru9I	TTAA	7 cut(s)	63, 90, 105, 183, 1101, 1562, 1617
TscAI	CASTG	5 cut(s)	213, 234, 289, 387, 1170
TseFI	GTSAC	6 cut(s)	284, 782, 835, 961, 1114, 1126
TseI	GCWGC	1 cut(s)	1307
Tsp45I	GTSAC	6 cut(s)	284, 782, 835, 961, 1114, 1126
TspDTI	ATGAA	7 cut(s)	67, 281, 437, 587, 676, 822, 1196
TspGWI	ACGGA	2 cut(s)	833, 1202
TspRI	CASTG	5 cut(s)	213, 234, 289, 387, 1170
VpaK11BI	GGWCC	3 cut(s)	359, 508, 1257
VspI	ATTAAT	1 cut(s)	183
XapI	RAATTY	4 cut(s)	896, 1203, 1270, 1341
XceI	RCATGY	2 cut(s)	764, 1649
XcmI	CCANNNNNNNNNTGG	1 cut(s)	585
XmiI	GTMKAC	1 cut(s)	30
XmnI	GAANNNNTTC	1 cut(s)	1542
XspI	CTAG	5 cut(s)	165, 842, 947, 1010, 1232
ZrmI	AGTACT	1 cut(s)	640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.