Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001139

Physical Location & Seq

Genomic Coordinates Forward (+)

915355 .. 919170

Gene Structure 3816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G012000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGCATCCAGAGTAGTGACACCCGCTCTCTTGTTATTACTCTTCTCCATCTTCATCACCTTCTCGCCAGCCTTATGCCTCAAACAGCATCCGCTAGACGCTCTAACACCGTCCGAGTTCATCCATATCAAAGCCATAATCCATAAAGCATACCCTGCCCAAAACCTAACCTTCCAATACGTAGGCCTAGATGAACCAGAAAAGTACACCGTCCTCTCATGGCAATCAAAATCCACCACCACCACCAAATCTCCACCACCGCCTCGCCGAGCCTTGGTCGTTACACGGCTTAATAAGGAAACCCACGAGATTATCGTAGATTTATCGACCCGTTCCATAGTCTCTAGTAAAGTTCACAACGGAGCAAATGGCTTACCTGTGTTAACCTTGGACGAACAAACATATGCAAATGAGTTGCCATTTAAACATGAACCATTTATCAAGTCCATTAGAAAGAGAGGGCTTGATATATCCCAAGTTTTGTGCAGCGGTTTTTCAGTTGGTTGGTTTGGAGAGGCAAAGAGTAGAAGAACATTAAAGATTAATTGTTTCTACACAAATGGGACAGTGAACTTGTATGTGAGGCCAGTGGAGGGAATAGCATTAGTGGTTGATCTAGATGAGATGGAGATAATTAAATATAGTGACAGATTTATAGTTCCTGTGCCAAAAGGCGAGGGAACTGAGTACCAAGCTTCGAAGCAGAAGCCCCCTTTCGGTCCATTGCTACACGGCGCACCGGTGGTGCAGTCGCAGGAAGAAGGGTTCAGCCTCGAGGGGCACACTATCAGATGGGCTAACTGGGTCTTCCATCTCGGATTTGACGTTCGAACTGGTACAATCATATCTCTAGCATCAATTTATGATCTTGCAAAGCACAAATATAGAAGGGTCTTGTATAGAGGCTTTGTATCAGAGCTTTTTGTACCATACATGAACCCAACCGAGGACTGGTACTTCAAAACCTTCTTCGACTGTGGAGAATTTGGGTTTGGTCAATCCGCAGTGTCACTTGAGCCATTGACTGATTGCCCAGCCAACGCCAAATTCATGGATGCCTACTATGCTGGCCAAGATGGCACACCTGTCAAGATATCAAATGCTTTCTGTATTTTTGAACGACATGCAGGCAACATTTTGTGGCGTCACACAGAAGTGACCATCCCAAATAAAGTGATCACCGAGGTCAGGCCAGAGGTGACGCTAGTGGTGAGGATGGTTGCAGTTGTGGGCAACTATGACTACATAATTGATTGGGTATTCAAGCCAAGTGGCTCAATCAAGCTGGAGGTTGGGCTAACAGGTGTGCTAGAAACTGAAGGGGTTAAGTACACCAAGACAAATGAAATAGAGAAGGAGGTTTATGGTACACTAGTTGCAGATAATACCATTGCTGTAAACCATGACCACTTCTTGACTTATCATCTTGACCTTGATGTGGATGGTGAAGCCAACTCCTTTGTCAAGAACAAAATGGTGACCAAACGAGTGAAAGACCCCAATATTCCAAGGAAGAGCTATTGGACTGTTGAAAGTGAGACAGCTAAAACTGAATCGGATGCAAAACTTCATTTGGGTTTGAAGCCATCTGACTTGGTTGTGGTAAATCCTAATAAAAGAACAAAACCTGGAAACCCAATTGGTTACCGTTTGATTCCGGGGTCAGTTGCAGGACCCCTTTTGTTGGAGGACGATTACCCACAAATTCGTGGGGCTTTCACCAAGTACAATGTGTGGGTTACACCATACAATAAATCTGAAAAATGGGCAGGAGGACAATATGTGGATCAAAGCAGAGGAGGTGATACTCTAGCAACATGGAGCCTCAGGAATAGGGAGATTGAGAACAAAGACATAGTGTTATGGTACACCATTGGCTTTCACCATGCTCCATGCCAAGAAGACTTTCCAATGATGCCAACATTGAGTGGTGGGTTTGAGCTCCGACCAACCAATTTCTTTGAGAGCAGTCCAGTGCTTAAAGTTAGAACAATATCTCCTAAGCATGTGCCTTTGCCTAATTGCACCACCAAAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0016491 GO:0016638 GO:0016641 GO:0042221 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0070887 GO:0071241 GO:0097184 GO:0097185 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

680

Amino Acids

76.49

Weight (kDa)

7.96

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31690 AT1G31710
fragaria_vesca	FvH4_2g30510 FvH4_4g15340 FvH4_4g15360 FvH4_4g15380
malus_domestica	MD16G1191900.v1.1 MD16G1192100.v1.1 MD16G1192300.v1.1
prunus_persica	Prupe.1G011900_v2.0.a1 Prupe.1G012000_v2.0.a1
pyrus_communis	pycom16g16160 pycom16g16180 pycom16g16190 pycom16g16200
rosa_chinensis	RchiOBHm_Chr2g0122101 RchiOBHm_Chr4g0416421 RchiOBHm_Chr4g0416431 RchiOBHm_Chr4g0416451 RchiOBHm_Chr4g0416461 RchiOBHm_Chr4g0416501
rosa_laevigata	RLG00000007978 RLG00000007979 RLG00000007982 RLG00000007983
rosa_multiflora	Rmu_co8318835.1_g000001 Rmu_sc0003722.1_g000010 Rmu_sc0003722.1_g000023
rosa_roxburghii	Rroxscaffold_2G00090210 Rroxscaffold_5G00360250 Rroxscaffold_5G00360280 Rroxscaffold_5G00360360 Rroxscaffold_5G00360370
rosa_rugosa	Rorug04G0141800 Rorug04G0141900 Rorug04G0142200
rosa_samantha	Rh4AG204100 Rh4AG204200 Rh4AG204300 Rh4AG204600 Rh4BG201800 Rh4BG202200 Rh4BG202400 Rh4CG215300 Rh4CG215500 Rh4CG215800 Rh4DG201600 Rh4DG201700 Rh4DG201800 Rh5BG514400 Rh5CG538000 Rh5DG526800 Rh7AG414700 Rh7AG415300
rosa_wichuraiana	Rw4G017280 Rw4G017290 Rw4G017310 Rw5G045710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	773
AccBSI	CCGCTC	1 cut(s)	26
AciI	CCGC	5 cut(s)	24, 92, 260, 489, 1002
AclWI	GGATC	1 cut(s)	1794
AcoI	YGGCCR	1 cut(s)	1069
AcsI	RAATTY	3 cut(s)	983, 1046, 1704
AcuI	CTGAAG	1 cut(s)	1338
AcyI	GRCGYC	1 cut(s)	1144
AfaI	GTAC	9 cut(s)	206, 689, 838, 927, 956, 1331, 1369, 1727, 1868
AfiI	CCNNNNNNNGG	8 cut(s)	274, 593, 716, 946, 951, 1188, 1438, 1684
AgeI	ACCGGT	1 cut(s)	739
AgsI	TTSAA	5 cut(s)	961, 1118, 1264, 1532, 1582
AhlI	ACTAGT	1 cut(s)	1372
AjnI	CCWGG	1 cut(s)	1627
AjuI	GAANNNNNNNTTGG	6 cut(s)	975, 1007, 1031, 1063, 1890, 1922
AleI	CACNNNNGTG	1 cut(s)	1154
AloI	GAACNNNNNNTCC	6 cut(s)	749, 781, 810, 842, 1981, 2013
AluBI	AGCT	6 cut(s)	695, 919, 1285, 1518, 1544, 1942
AluI	AGCT	6 cut(s)	695, 919, 1285, 1518, 1544, 1942
Alw21I	GWGCWC	1 cut(s)	1944
Alw26I	GTCTC	2 cut(s)	346, 1532
AlwI	GGATC	1 cut(s)	1794
Ama87I	CYCGRG	1 cut(s)	773
AoxI	GGCC	4 cut(s)	184, 584, 1069, 1190
ApeKI	GCWGC	1 cut(s)	486
ApoI	RAATTY	3 cut(s)	983, 1046, 1704
AseI	ATTAAT	1 cut(s)	543
AsiGI	ACCGGT	1 cut(s)	739
Asp700I	GAANNNNTTC	1 cut(s)	1905
AspLEI	GCGC	1 cut(s)	737
AspS9I	GGNCC	2 cut(s)	719, 1673
AsuC2I	CCSGG	1 cut(s)	1659
AsuHPI	GGTGA	9 cut(s)	49, 1171, 1210, 1222, 1457, 1489, 1711, 1814, 1874
AsuII	TTCGAA	2 cut(s)	698, 829
AvaI	CYCGRG	1 cut(s)	773
AvaII	GGWCC	2 cut(s)	719, 1673
AxyI	CCTNAGG	1 cut(s)	1826
BaeGI	GKGCMC	1 cut(s)	783
BaeI	ACNNNNGTAYC	2 cut(s)	1359, 1392
BalI	TGGCCA	1 cut(s)	1071
BanII	GRGCYC	1 cut(s)	1944
BauI	CACGAG	1 cut(s)	305
BbsI	GAAGAC	2 cut(s)	799, 1908
Bbv12I	GWGCWC	1 cut(s)	1944
BbvI	GCAGC	1 cut(s)	498
BccI	CCATC	9 cut(s)	56, 619, 786, 819, 1070, 1169, 1210, 1436, 1594
BceAI	ACGGC	2 cut(s)	302, 748
BciT130I	CCWGG	1 cut(s)	1629
BclI	TGATCA	1 cut(s)	1176
BcnI	CCSGG	1 cut(s)	1659
BcoDI	GTCTC	2 cut(s)	346, 1532
BcuI	ACTAGT	1 cut(s)	1372
BglI	GCCNNNNNGGC	1 cut(s)	1077
BisI	GCNGC	1 cut(s)	487
BlsI	GCNGC	1 cut(s)	488
Bme1390I	CCNGG	2 cut(s)	1629, 1659
Bme18I	GGWCC	2 cut(s)	719, 1673
BmeT110I	CYCGRG	1 cut(s)	773
BmgT120I	GGNCC	2 cut(s)	719, 1673
BmiI	GGNNCC	2 cut(s)	1675, 1823
BmrFI	CCNGG	2 cut(s)	1629, 1659
BmrI	ACTGGG	1 cut(s)	811
BmsI	GCATC	6 cut(s)	14, 97, 863, 1045, 1549, 1905
BmuI	ACTGGG	1 cut(s)	811
BpiI	GAAGAC	2 cut(s)	799, 1908
BpmI	CTGGAG	1 cut(s)	1307
Bpu10I	CCTNAGC	1 cut(s)	2001
Bpu14I	TTCGAA	2 cut(s)	698, 829
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	1 cut(s)	1659
BsaAI	YACGTR	1 cut(s)	181
BsaHI	GRCGYC	1 cut(s)	1144
BsaJI	CCNNGG	6 cut(s)	273, 387, 945, 1182, 1508, 1658
BsaWI	WCCGGW	1 cut(s)	739
BsaXI	ACNNNNNCTCC	4 cut(s)	235, 265, 1981, 2011
Bsc4I	CCNNNNNNNGG	8 cut(s)	274, 593, 716, 946, 951, 1188, 1438, 1684
Bse118I	RCCGGY	1 cut(s)	739
Bse1I	ACTGG	5 cut(s)	587, 806, 838, 956, 1973
Bse21I	CCTNAGG	1 cut(s)	1826
Bse3DI	GCAATG	2 cut(s)	722, 1389
BseBI	CCWGG	1 cut(s)	1629
BseDI	CCNNGG	6 cut(s)	273, 387, 945, 1182, 1508, 1658
BseGI	GGATG	8 cut(s)	5, 88, 120, 1060, 1161, 1221, 1447, 1564
BseLI	CCNNNNNNNGG	8 cut(s)	274, 593, 716, 946, 951, 1188, 1438, 1684
BseMI	GCAATG	2 cut(s)	722, 1389
BseMII	CTCAG	2 cut(s)	675, 1840
BseNI	ACTGG	5 cut(s)	587, 806, 838, 956, 1973
BseRI	GAGGAG	1 cut(s)	1812
BseSI	GKGCMC	1 cut(s)	783
BseXI	GCAGC	1 cut(s)	498
BseYI	CCCAGC	1 cut(s)	1033
BsgI	GTGCAG	2 cut(s)	505, 767
BshFI	GGCC	4 cut(s)	186, 586, 1071, 1192
BshTI	ACCGGT	1 cut(s)	739
BsiHKAI	GWGCWC	1 cut(s)	1944
BsiHKCI	CYCGRG	1 cut(s)	773
BsiSI	CCGG	2 cut(s)	740, 1658
BslFI	GGGAC	1 cut(s)	577
BslI	CCNNNNNNNGG	8 cut(s)	274, 593, 716, 946, 951, 1188, 1438, 1684
BsmAI	GTCTC	2 cut(s)	346, 1532
BsmFI	GGGAC	1 cut(s)	577
BsnI	GGCC	4 cut(s)	186, 586, 1071, 1192
BsoBI	CYCGRG	1 cut(s)	773
Bsp119I	TTCGAA	2 cut(s)	698, 829
Bsp1286I	GDGCHC	2 cut(s)	783, 1944
Bsp143I	GATC	4 cut(s)	613, 865, 1176, 1786
BspACI	CCGC	5 cut(s)	24, 92, 260, 489, 1002
BspANI	GGCC	4 cut(s)	186, 586, 1071, 1192
BspCNI	CTCAG	2 cut(s)	676, 1839
BspLI	GGNNCC	2 cut(s)	1675, 1823
BspPI	GGATC	1 cut(s)	1794
BspQI	GCTCTTC	1 cut(s)	1508
BspT104I	TTCGAA	2 cut(s)	698, 829
BsrBI	CCGCTC	1 cut(s)	26
BsrDI	GCAATG	2 cut(s)	722, 1389
BsrFI	RCCGGY	1 cut(s)	739
BsrI	ACTGG	5 cut(s)	587, 806, 838, 956, 1973
BssAI	RCCGGY	1 cut(s)	739
BssECI	CCNNGG	6 cut(s)	273, 387, 945, 1182, 1508, 1658
BssMI	GATC	4 cut(s)	613, 865, 1176, 1786
BssNI	GRCGYC	1 cut(s)	1144
BssSI	CACGAG	1 cut(s)	305
BssT1I	CCWWGG	3 cut(s)	273, 387, 1508
Bst2BI	CACGAG	1 cut(s)	305
Bst2UI	CCWGG	1 cut(s)	1629
Bst4CI	ACNGT	6 cut(s)	111, 211, 568, 977, 1528, 1649
Bst6I	CTCTTC	2 cut(s)	47, 1508
BstACI	GRCGYC	1 cut(s)	1144
BstAPI	GCANNNNNTGC	1 cut(s)	155
BstBAI	YACGTR	1 cut(s)	181
BstBI	TTCGAA	2 cut(s)	698, 829
BstC8I	GCNNGC	3 cut(s)	69, 1069, 1129
BstDEI	CTNAG	3 cut(s)	684, 1826, 2001
BstEII	GGTNACC	2 cut(s)	1477, 1643
BstF5I	GGATG	8 cut(s)	5, 88, 120, 1060, 1161, 1221, 1447, 1564
BstHHI	GCGC	1 cut(s)	737
BstKTI	GATC	4 cut(s)	616, 868, 1179, 1789
BstMAI	GTCTC	2 cut(s)	346, 1532
BstMBI	GATC	4 cut(s)	613, 865, 1176, 1786
BstMWI	GCNNNNNNNGC	3 cut(s)	155, 1064, 1077
BstNI	CCWGG	1 cut(s)	1629
BstNSI	RCATGY	2 cut(s)	1127, 2009
BstPI	GGTNACC	2 cut(s)	1477, 1643
BstSCI	CCNGG	2 cut(s)	1627, 1657
BstSLI	GKGCMC	1 cut(s)	783
BstSNI	TACGTA	1 cut(s)	181
BstV1I	GCAGC	1 cut(s)	498
BstV2I	GAAGAC	2 cut(s)	799, 1908
BstXI	CCANNNNNNTGG	1 cut(s)	1051
Bsu36I	CCTNAGG	1 cut(s)	1826
BsuRI	GGCC	4 cut(s)	186, 586, 1071, 1192
BtsCI	GGATG	8 cut(s)	5, 88, 120, 1060, 1161, 1221, 1447, 1564
BtsI	GCAGTG	1 cut(s)	1011
BtsIMutI	CAGTG	4 cut(s)	573, 594, 1011, 1980
Cac8I	GCNNGC	3 cut(s)	69, 1069, 1129
CfoI	GCGC	1 cut(s)	737
Cfr10I	RCCGGY	1 cut(s)	739
Cfr13I	GGNCC	2 cut(s)	719, 1673
CseI	GACGC	3 cut(s)	107, 1133, 1210
Csp6I	GTAC	9 cut(s)	205, 688, 837, 926, 955, 1330, 1368, 1726, 1867
CspAI	ACCGGT	1 cut(s)	739
CspCI	CAANNNNNGTGG	2 cut(s)	1252, 1287
CviQI	GTAC	9 cut(s)	205, 688, 837, 926, 955, 1330, 1368, 1726, 1867
DdeI	CTNAG	3 cut(s)	684, 1826, 2001
DpnI	GATC	4 cut(s)	615, 867, 1178, 1788
DpnII	GATC	4 cut(s)	613, 865, 1176, 1786
DraI	TTTAAA	1 cut(s)	424
EaeI	YGGCCR	1 cut(s)	1069
Eam1104I	CTCTTC	2 cut(s)	47, 1508
EarI	CTCTTC	2 cut(s)	47, 1508
Ecl136II	GAGCTC	1 cut(s)	1942
Eco105I	TACGTA	1 cut(s)	181
Eco130I	CCWWGG	3 cut(s)	273, 387, 1508
Eco147I	AGGCCT	1 cut(s)	186
Eco24I	GRGCYC	1 cut(s)	1944
Eco32I	GATATC	1 cut(s)	1095
Eco47I	GGWCC	2 cut(s)	719, 1673
Eco53kI	GAGCTC	1 cut(s)	1942
Eco57I	CTGAAG	1 cut(s)	1338
Eco81I	CCTNAGG	1 cut(s)	1826
Eco88I	CYCGRG	1 cut(s)	773
Eco91I	GGTNACC	2 cut(s)	1477, 1643
EcoICRI	GAGCTC	1 cut(s)	1942
EcoO109I	RGGNCCY	1 cut(s)	1673
EcoO65I	GGTNACC	2 cut(s)	1477, 1643
EcoRII	CCWGG	1 cut(s)	1627
EcoRV	GATATC	1 cut(s)	1095
EcoT14I	CCWWGG	3 cut(s)	273, 387, 1508
EcoT38I	GRGCYC	1 cut(s)	1944
ErhI	CCWWGG	3 cut(s)	273, 387, 1508
FaqI	GGGAC	1 cut(s)	577
FauI	CCCGC	1 cut(s)	31
FauNDI	CATATG	1 cut(s)	403
FbaI	TGATCA	1 cut(s)	1176
Fnu4HI	GCNGC	1 cut(s)	487
FokI	GGATG	7 cut(s)	75, 107, 1067, 1148, 1228, 1454, 1571
FriOI	GRGCYC	1 cut(s)	1944
Fsp4HI	GCNGC	1 cut(s)	487
GlaI	GCGC	1 cut(s)	736
GluI	GCNGC	1 cut(s)	487
GsaI	CCCAGC	1 cut(s)	1037
GsuI	CTGGAG	1 cut(s)	1307
HaeIII	GGCC	4 cut(s)	186, 586, 1071, 1192
HapII	CCGG	2 cut(s)	740, 1658
HgaI	GACGC	3 cut(s)	107, 1133, 1210
HhaI	GCGC	1 cut(s)	737
Hin1I	GRCGYC	1 cut(s)	1144
Hin6I	GCGC	1 cut(s)	735
HinP1I	GCGC	1 cut(s)	735
HincII	GTYRAC	1 cut(s)	384
HindII	GTYRAC	1 cut(s)	384
HindIII	AAGCTT	1 cut(s)	693
HinfI	GANTC	2 cut(s)	1553, 1654
HpaI	GTTAAC	1 cut(s)	384
HpaII	CCGG	2 cut(s)	740, 1658
HphI	GGTGA	9 cut(s)	49, 1171, 1210, 1222, 1457, 1489, 1711, 1814, 1874
Hpy166II	GTNNAC	8 cut(s)	207, 355, 384, 571, 1332, 1370, 1399, 1869
Hpy188I	TCNGA	8 cut(s)	115, 791, 818, 916, 1558, 1591, 1759, 1946
Hpy188III	TCNNGA	7 cut(s)	9, 617, 1090, 1414, 1427, 1465, 1828
Hpy8I	GTNNAC	8 cut(s)	207, 355, 384, 571, 1332, 1370, 1399, 1869
HpyAV	CCTTC	7 cut(s)	70, 181, 755, 882, 976, 1313, 1348
HpyCH4III	ACNGT	6 cut(s)	111, 211, 568, 977, 1528, 1649
HpyCH4IV	ACGT	2 cut(s)	180, 825
HpyF10VI	GCNNNNNNNGC	3 cut(s)	155, 1064, 1077
HpyF3I	CTNAG	3 cut(s)	684, 1826, 2001
HpySE526I	ACGT	2 cut(s)	180, 825
Hsp92I	GRCGYC	1 cut(s)	1144
HspAI	GCGC	1 cut(s)	735
Ksp22I	TGATCA	1 cut(s)	1176
KspAI	GTTAAC	1 cut(s)	384
Kzo9I	GATC	4 cut(s)	613, 865, 1176, 1786
LguI	GCTCTTC	1 cut(s)	1508
LmnI	GCTCC	4 cut(s)	362, 1821, 1894, 1947
Lsp1109I	GCAGC	1 cut(s)	498
LweI	GCATC	6 cut(s)	14, 97, 863, 1045, 1549, 1905
MaeII	ACGT	2 cut(s)	180, 825
MalI	GATC	4 cut(s)	615, 867, 1178, 1788
MbiI	CCGCTC	1 cut(s)	26
MboI	GATC	4 cut(s)	613, 865, 1176, 1786
MboII	GAAGA	8 cut(s)	34, 43, 540, 770, 799, 961, 1525, 1913
MfeI	CAATTG	1 cut(s)	1638
MhlI	GDGCHC	2 cut(s)	783, 1944
MlsI	TGGCCA	1 cut(s)	1071
MluNI	TGGCCA	1 cut(s)	1071
MmeI	TCCRAC	2 cut(s)	1665, 1969
Mox20I	TGGCCA	1 cut(s)	1071
MroXI	GAANNNNTTC	1 cut(s)	1905
MscI	TGGCCA	1 cut(s)	1071
MseI	TTAA	8 cut(s)	291, 383, 423, 536, 543, 636, 1326, 1980
MslI	CAYNNNNRTG	1 cut(s)	1154
Msp20I	TGGCCA	1 cut(s)	1071
MspA1I	CMGCKG	1 cut(s)	489
MspI	CCGG	2 cut(s)	740, 1658
MspR9I	CCNGG	2 cut(s)	1629, 1659
MunI	CAATTG	1 cut(s)	1638
MvaI	CCWGG	1 cut(s)	1629
MwoI	GCNNNNNNNGC	3 cut(s)	155, 1064, 1077
NciI	CCSGG	1 cut(s)	1659
NdeI	CATATG	1 cut(s)	403
NdeII	GATC	4 cut(s)	613, 865, 1176, 1786
NlaIV	GGNNCC	2 cut(s)	1675, 1823
NmeAIII	GCCGAG	1 cut(s)	293
NmuCI	GTSAC	7 cut(s)	16, 644, 1008, 1145, 1156, 1198, 1477
NspI	RCATGY	2 cut(s)	1127, 2009
NspV	TTCGAA	2 cut(s)	698, 829
OliI	CACNNNNGTG	1 cut(s)	1154
PaeR7I	CTCGAG	1 cut(s)	773
PceI	AGGCCT	1 cut(s)	186
PciSI	GCTCTTC	1 cut(s)	1508
PcsI	WCGNNNNNNNCGW	2 cut(s)	312, 822
PdmI	GAANNNNTTC	1 cut(s)	1905
PfeI	GAWTC	2 cut(s)	1553, 1654
PinAI	ACCGGT	1 cut(s)	739
PkrI	GCNGC	1 cut(s)	488
Ppu21I	YACGTR	1 cut(s)	181
PpuMI	RGGWCCY	1 cut(s)	1673
PshBI	ATTAAT	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	1944
Psp5II	RGGWCCY	1 cut(s)	1673
Psp6I	CCWGG	1 cut(s)	1627
PspEI	GGTNACC	2 cut(s)	1477, 1643
PspFI	CCCAGC	1 cut(s)	1033
PspGI	CCWGG	1 cut(s)	1627
PspN4I	GGNNCC	2 cut(s)	1675, 1823
PspPI	GGNCC	2 cut(s)	719, 1673
PspPPI	RGGWCCY	1 cut(s)	1673
PspXI	VCTCGAGB	1 cut(s)	773
RsaI	GTAC	9 cut(s)	206, 689, 838, 927, 956, 1331, 1369, 1727, 1868
RsaNI	GTAC	9 cut(s)	205, 688, 837, 926, 955, 1330, 1368, 1726, 1867
RseI	CAYNNNNRTG	1 cut(s)	1154
SacI	GAGCTC	1 cut(s)	1944
SapI	GCTCTTC	1 cut(s)	1508
SaqAI	TTAA	8 cut(s)	291, 383, 423, 536, 543, 636, 1326, 1980
SatI	GCNGC	1 cut(s)	487
Sau3AI	GATC	4 cut(s)	613, 865, 1176, 1786
Sau96I	GGNCC	2 cut(s)	719, 1673
ScrFI	CCNGG	2 cut(s)	1629, 1659
SduI	GDGCHC	2 cut(s)	783, 1944
SfaNI	GCATC	6 cut(s)	14, 97, 863, 1045, 1549, 1905
Sfr274I	CTCGAG	1 cut(s)	773
SfuI	TTCGAA	2 cut(s)	698, 829
SgrAI	CRCCGGYG	1 cut(s)	739
SinI	GGWCC	2 cut(s)	719, 1673
SlaI	CTCGAG	1 cut(s)	773
SmiMI	CAYNNNNRTG	1 cut(s)	1154
SmlI	CTYRAG	2 cut(s)	773, 1013
SmoI	CTYRAG	2 cut(s)	773, 1013
SnaBI	TACGTA	1 cut(s)	181
SpeI	ACTAGT	1 cut(s)	1372
SseBI	AGGCCT	1 cut(s)	186
SsiI	CCGC	5 cut(s)	24, 92, 260, 489, 1002
SspI	AATATT	1 cut(s)	1504
SstI	GAGCTC	1 cut(s)	1944
StuI	AGGCCT	1 cut(s)	186
StyD4I	CCNGG	2 cut(s)	1627, 1657
StyI	CCWWGG	3 cut(s)	273, 387, 1508
TaaI	ACNGT	6 cut(s)	111, 211, 568, 977, 1528, 1649
TaiI	ACGT	2 cut(s)	183, 828
TaqI	TCGA	5 cut(s)	326, 698, 774, 829, 972
TaqII	GACCGA	1 cut(s)	707
TatI	WGTACW	3 cut(s)	204, 1329, 1725
TfiI	GAWTC	2 cut(s)	1553, 1654
Tru1I	TTAA	8 cut(s)	291, 383, 423, 536, 543, 636, 1326, 1980
Tru9I	TTAA	8 cut(s)	291, 383, 423, 536, 543, 636, 1326, 1980
TscAI	CASTG	4 cut(s)	573, 594, 1011, 1980
TseFI	GTSAC	7 cut(s)	16, 644, 1008, 1145, 1156, 1198, 1477
TseI	GCWGC	1 cut(s)	486
Tsp45I	GTSAC	7 cut(s)	16, 644, 1008, 1145, 1156, 1198, 1477
TspDTI	ATGAA	8 cut(s)	43, 109, 207, 444, 950, 1039, 1359, 1559
TspGWI	ACGGA	1 cut(s)	375
TspRI	CASTG	4 cut(s)	573, 594, 1011, 1980
VpaK11BI	GGWCC	2 cut(s)	719, 1673
VspI	ATTAAT	1 cut(s)	543
XapI	RAATTY	3 cut(s)	983, 1046, 1704
XbaI	TCTAGA	1 cut(s)	616
XceI	RCATGY	2 cut(s)	1127, 2009
XcmI	CCANNNNNNNNNTGG	1 cut(s)	948
XhoI	CTCGAG	1 cut(s)	773
XmnI	GAANNNNTTC	1 cut(s)	1905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.